63.27
8.446
23.779
0.194
A
O5'
DC
1
ATOM
A
O5'
DC
1
1
1.00
1
O
55.06
8.357
23.914
-1.208
A
C5'
DC
1
ATOM
A
C5'
DC
1
1
1.00
1
C
49.74
7.002
24.467
-1.592
A
C4'
DC
1
ATOM
A
C4'
DC
1
1
1.00
1
C
46.25
6.932
24.955
-2.942
A
O4'
DC
1
ATOM
A
O4'
DC
1
1
1.00
1
O
46.82
5.844
23.454
-1.461
A
C3'
DC
1
ATOM
A
C3'
DC
1
1
1.00
1
C
42.97
4.623
24.058
-1.085
A
O3'
DC
1
ATOM
A
O3'
DC
1
1
1.00
1
O
51.19
5.670
22.904
-2.856
A
C2'
DC
1
ATOM
A
C2'
DC
1
1
1.00
1
C
43.77
6.108
24.055
-3.747
A
C1'
DC
1
ATOM
A
C1'
DC
1
1
1.00
1
C
40.13
6.846
23.884
-5.005
A
N1
DC
1
ATOM
A
N1
DC
1
1
1.00
1
N
38.55
6.490
24.664
-6.106
A
C2
DC
1
ATOM
A
C2
DC
1
1
1.00
1
C
32.26
5.560
25.469
-5.972
A
O2
DC
1
ATOM
A
O2
DC
1
1
1.00
1
O
41.66
7.177
24.500
-7.267
A
N3
DC
1
ATOM
A
N3
DC
1
1
1.00
1
N
45.03
8.172
23.604
-7.320
A
C4
DC
1
ATOM
A
C4
DC
1
1
1.00
1
C
47.99
8.826
23.471
-8.475
A
N4
DC
1
ATOM
A
N4
DC
1
1
1.00
1
N
44.85
8.551
22.798
-6.200
A
C5
DC
1
ATOM
A
C5
DC
1
1
1.00
1
C
43.59
7.856
22.976
-5.064
A
C6
DC
1
ATOM
A
C6
DC
1
1
1.00
1
C
50.98
3.973
23.907
0.415
A
P
DG
2
ATOM
A
P
DG
1
2
1.00
1
P
84.49
4.345
22.558
0.974
A
OP1
DG
2
ATOM
A
OP1
DG
1
2
1.00
1
O
48.51
2.527
24.297
0.244
A
OP2
DG
2
ATOM
A
OP2
DG
1
2
1.00
1
O
62.92
4.813
25.004
1.180
A
O5'
DG
2
ATOM
A
O5'
DG
1
2
1.00
1
O
65.74
4.355
26.101
1.923
A
C5'
DG
2
ATOM
A
C5'
DG
1
2
1.00
1
C
55.07
4.793
25.976
3.379
A
C4'
DG
2
ATOM
A
C4'
DG
1
2
1.00
1
C
59.47
3.662
25.851
4.281
A
O4'
DG
2
ATOM
A
O4'
DG
1
2
1.00
1
O
41.66
5.679
24.758
3.673
A
C3'
DG
2
ATOM
A
C3'
DG
1
2
1.00
1
C
38.10
7.080
25.099
3.685
A
O3'
DG
2
ATOM
A
O3'
DG
1
2
1.00
1
O
45.39
5.341
24.302
5.040
A
C2'
DG
2
ATOM
A
C2'
DG
1
2
1.00
1
C
50.86
4.094
25.070
5.442
A
C1'
DG
2
ATOM
A
C1'
DG
1
2
1.00
1
C
47.70
2.891
24.052
5.633
A
N9
DG
2
ATOM
A
N9
DG
1
2
1.00
1
N
50.52
2.312
23.399
4.575
A
C8
DG
2
ATOM
A
C8
DG
1
2
1.00
1
C
48.84
1.353
22.618
4.958
A
N7
DG
2
ATOM
A
N7
DG
1
2
1.00
1
N
31.36
1.285
22.750
6.326
A
C5
DG
2
ATOM
A
C5
DG
1
2
1.00
1
C
34.20
0.404
22.111
7.229
A
C6
DG
2
ATOM
A
C6
DG
1
2
1.00
1
C
26.13
-0.493
21.292
6.955
A
O6
DG
2
ATOM
A
O6
DG
1
2
1.00
1
O
30.48
0.681
22.533
8.527
A
N1
DG
2
ATOM
A
N1
DG
1
2
1.00
1
N
31.82
1.657
23.431
8.867
A
C2
DG
2
ATOM
A
C2
DG
1
2
1.00
1
C
37.19
1.803
23.739
10.162
A
N2
DG
2
ATOM
A
N2
DG
1
2
1.00
1
N
36.61
2.489
24.035
8.014
A
N3
DG
2
ATOM
A
N3
DG
1
2
1.00
1
N
32.47
2.234
23.637
6.755
A
C4
DG
2
ATOM
A
C4
DG
1
2
1.00
1
C
42.83
8.193
24.027
4.211
A
P
DU
3
ATOM
A
P
DU
1
3
1.00
1
P
44.64
9.579
24.497
3.827
A
OP1
DU
3
ATOM
A
OP1
DU
1
3
1.00
1
O
42.12
7.697
22.675
3.775
A
OP2
DU
3
ATOM
A
OP2
DU
1
3
1.00
1
O
39.85
8.043
24.141
5.788
A
O5'
DU
3
ATOM
A
O5'
DU
1
3
1.00
1
O
42.73
8.062
25.230
6.652
A
C5'
DU
3
ATOM
A
C5'
DU
1
3
1.00
1
C
45.83
8.006
24.823
8.096
A
C4'
DU
3
ATOM
A
C4'
DU
1
3
1.00
1
C
35.35
6.760
24.357
8.590
A
O4'
DU
3
ATOM
A
O4'
DU
1
3
1.00
1
O
39.31
9.081
23.815
8.550
A
C3'
DU
3
ATOM
A
C3'
DU
1
3
1.00
1
C
44.66
9.600
24.125
9.831
A
O3'
DU
3
ATOM
A
O3'
DU
1
3
1.00
1
O
29.85
8.319
22.514
8.691
A
C2'
DU
3
ATOM
A
C2'
DU
1
3
1.00
1
C
27.51
6.950
23.027
9.238
A
C1'
DU
3
ATOM
A
C1'
DU
1
3
1.00
1
C
35.31
5.817
22.216
8.763
A
N1
DU
3
ATOM
A
N1
DU
1
3
1.00
1
N
35.85
4.863
21.742
9.632
A
C2
DU
3
ATOM
A
C2
DU
1
3
1.00
1
C
35.49
4.939
21.987
10.825
A
O2
DU
3
ATOM
A
O2
DU
1
3
1.00
1
O
24.27
3.864
20.998
9.038
A
N3
DU
3
ATOM
A
N3
DU
1
3
1.00
1
N
26.89
3.755
20.704
7.685
A
C4
DU
3
ATOM
A
C4
DU
1
3
1.00
1
C
25.30
2.836
20.036
7.226
A
O4
DU
3
ATOM
A
O4
DU
1
3
1.00
1
O
24.48
4.799
21.241
6.846
A
C5
DU
3
ATOM
A
C5
DU
1
3
1.00
1
C
25.24
5.746
21.949
7.411
A
C6
DU
3
ATOM
A
C6
DU
1
3
1.00
1
C
38.66
10.651
23.482
10.874
A
P
DA
4
ATOM
A
P
DA
1
4
1.00
1
P
31.34
11.297
24.672
11.532
A
OP1
DA
4
ATOM
A
OP1
DA
1
4
1.00
1
O
34.00
11.441
22.385
10.227
A
OP2
DA
4
ATOM
A
OP2
DA
1
4
1.00
1
O
36.79
9.643
22.776
11.918
A
O5'
DA
4
ATOM
A
O5'
DA
1
4
1.00
1
O
28.38
8.869
23.479
12.880
A
C5'
DA
4
ATOM
A
C5'
DA
1
4
1.00
1
C
29.26
8.187
22.495
13.804
A
C4'
DA
4
ATOM
A
C4'
DA
1
4
1.00
1
C
31.42
7.098
21.784
13.210
A
O4'
DA
4
ATOM
A
O4'
DA
1
4
1.00
1
O
27.67
9.110
21.461
14.443
A
C3'
DA
4
ATOM
A
C3'
DA
1
4
1.00
1
C
30.08
8.853
21.250
15.831
A
O3'
DA
4
ATOM
A
O3'
DA
1
4
1.00
1
O
25.95
8.798
20.166
13.741
A
C2'
DA
4
ATOM
A
C2'
DA
1
4
1.00
1
C
29.55
7.290
20.329
13.456
A
C1'
DA
4
ATOM
A
C1'
DA
1
4
1.00
1
C
25.39
6.788
19.726
12.269
A
N9
DA
4
ATOM
A
N9
DA
1
4
1.00
1
N
28.61
7.305
20.018
11.024
A
C8
DA
4
ATOM
A
C8
DA
1
4
1.00
1
C
26.58
6.720
19.368
10.030
A
N7
DA
4
ATOM
A
N7
DA
1
4
1.00
1
N
25.98
5.761
18.603
10.686
A
C5
DA
4
ATOM
A
C5
DA
1
4
1.00
1
C
28.71
4.807
17.693
10.205
A
C6
DA
4
ATOM
A
C6
DA
1
4
1.00
1
C
35.86
4.689
17.415
8.905
A
N6
DA
4
ATOM
A
N6
DA
1
4
1.00
1
N
29.41
3.992
17.090
11.105
A
N1
DA
4
ATOM
A
N1
DA
1
4
1.00
1
N
23.52
4.154
17.406
12.400
A
C2
DA
4
ATOM
A
C2
DA
1
4
1.00
1
C
19.55
5.011
18.244
12.979
A
N3
DA
4
ATOM
A
N3
DA
1
4
1.00
1
N
23.97
5.796
18.818
12.065
A
C4
DA
4
ATOM
A
C4
DA
1
4
1.00
1
C
36.24
10.068
20.596
16.724
A
P
DC
5
ATOM
A
P
DC
1
5
1.00
1
P
43.86
10.030
21.177
18.106
A
OP1
DC
5
ATOM
A
OP1
DC
1
5
1.00
1
O
33.01
11.236
20.526
15.796
A
OP2
DC
5
ATOM
A
OP2
DC
1
5
1.00
1
O
35.93
9.542
19.092
16.838
A
O5'
DC
5
ATOM
A
O5'
DC
1
5
1.00
1
O
22.10
8.310
18.645
17.355
A
C5'
DC
5
ATOM
A
C5'
DC
1
5
1.00
1
C
26.06
8.122
17.183
17.003
A
C4'
DC
5
ATOM
A
C4'
DC
1
5
1.00
1
C
30.32
7.669
16.937
15.688
A
O4'
DC
5
ATOM
A
O4'
DC
1
5
1.00
1
O
27.39
9.358
16.300
17.247
A
C3'
DC
5
ATOM
A
C3'
DC
1
5
1.00
1
C
24.61
9.078
15.211
18.134
A
O3'
DC
5
ATOM
A
O3'
DC
1
5
1.00
1
O
29.03
9.711
15.705
15.914
A
C2'
DC
5
ATOM
A
C2'
DC
1
5
1.00
1
C
31.14
8.435
15.812
15.109
A
C1'
DC
5
ATOM
A
C1'
DC
1
5
1.00
1
C
30.87
8.268
15.859
13.647
A
N1
DC
5
ATOM
A
N1
DC
1
5
1.00
1
N
26.97
7.200
15.149
13.096
A
C2
DC
5
ATOM
A
C2
DC
1
5
1.00
1
C
22.82
6.430
14.507
13.821
A
O2
DC
5
ATOM
A
O2
DC
1
5
1.00
1
O
22.87
7.024
15.177
11.755
A
N3
DC
5
ATOM
A
N3
DC
1
5
1.00
1
N
24.02
7.836
15.859
10.958
A
C4
DC
5
ATOM
A
C4
DC
1
5
1.00
1
C
17.55
7.538
15.793
9.650
A
N4
DC
5
ATOM
A
N4
DC
1
5
1.00
1
N
21.16
8.937
16.595
11.489
A
C5
DC
5
ATOM
A
C5
DC
1
5
1.00
1
C
26.77
9.106
16.562
12.824
A
C6
DC
5
ATOM
A
C6
DC
1
5
1.00
1
C
25.93
10.094
14.387
19.065
A
P
DG
6
ATOM
A
P
DG
1
6
1.00
1
P
28.86
9.332
13.788
20.216
A
OP1
DG
6
ATOM
A
OP1
DG
1
6
1.00
1
O
25.28
11.390
15.126
19.233
A
OP2
DG
6
ATOM
A
OP2
DG
1
6
1.00
1
O
26.16
10.448
13.151
18.081
A
O5'
DG
6
ATOM
A
O5'
DG
1
6
1.00
1
O
20.06
9.568
12.428
17.274
A
C5'
DG
6
ATOM
A
C5'
DG
1
6
1.00
1
C
19.49
10.298
11.261
16.602
A
C4'
DG
6
ATOM
A
C4'
DG
1
6
1.00
1
C
15.93
11.283
11.664
15.661
A
O4'
DG
6
ATOM
A
O4'
DG
1
6
1.00
1
O
19.80
10.982
10.301
17.600
A
C3'
DG
6
ATOM
A
C3'
DG
1
6
1.00
1
C
23.99
10.232
9.060
17.715
A
O3'
DG
6
ATOM
A
O3'
DG
1
6
1.00
1
O
26.31
12.276
9.888
16.923
A
C2'
DG
6
ATOM
A
C2'
DG
1
6
1.00
1
C
23.82
12.612
11.132
16.089
A
C1'
DG
6
ATOM
A
C1'
DG
1
6
1.00
1
C
26.12
13.142
12.355
16.957
A
N9
DG
6
ATOM
A
N9
DG
1
6
1.00
1
N
22.85
13.564
12.283
18.258
A
C8
DG
6
ATOM
A
C8
DG
1
6
1.00
1
C
20.91
13.947
13.433
18.729
A
N7
DG
6
ATOM
A
N7
DG
1
6
1.00
1
N
27.99
13.761
14.312
17.666
A
C5
DG
6
ATOM
A
C5
DG
1
6
1.00
1
C
23.32
13.996
15.706
17.556
A
C6
DG
6
ATOM
A
C6
DG
1
6
1.00
1
C
39.35
14.436
16.458
18.430
A
O6
DG
6
ATOM
A
O6
DG
1
6
1.00
1
O
20.85
13.671
16.203
16.300
A
N1
DG
6
ATOM
A
N1
DG
1
6
1.00
1
N
19.39
13.174
15.456
15.253
A
C2
DG
6
ATOM
A
C2
DG
1
6
1.00
1
C
20.91
12.904
16.070
14.093
A
N2
DG
6
ATOM
A
N2
DG
1
6
1.00
1
N
25.62
12.952
14.158
15.346
A
N3
DG
6
ATOM
A
N3
DG
1
6
1.00
1
N
30.54
13.265
13.659
16.568
A
C4
DG
6
ATOM
A
C4
DG
1
6
1.00
1
C
36.07
0.838
8.038
5.553
B
P
DG
2
ATOM
B
P
DG
1
2
0.50
1
P
46.03
0.323
9.366
5.046
B
OP1
DG
2
ATOM
B
OP1
DG
1
2
0.50
1
O
41.56
2.319
7.753
5.536
B
OP2
DG
2
ATOM
B
OP2
DG
1
2
0.50
1
O
28.57
0.345
7.899
7.065
B
O5'
DG
2
ATOM
B
O5'
DG
1
2
0.50
1
O
29.77
1.104
7.320
8.092
B
C5'
DG
2
ATOM
B
C5'
DG
1
2
0.50
1
C
21.60
0.704
7.874
9.445
B
C4'
DG
2
ATOM
B
C4'
DG
1
2
1.00
1
C
24.22
1.599
8.868
9.952
B
O4'
DG
2
ATOM
B
O4'
DG
1
2
1.00
1
O
24.15
-0.701
8.537
9.466
B
C3'
DG
2
ATOM
B
C3'
DG
1
2
1.00
1
C
37.93
-1.295
8.439
10.763
B
O3'
DG
2
ATOM
B
O3'
DG
1
2
1.00
1
O
25.20
-0.411
9.996
9.240
B
C2'
DG
2
ATOM
B
C2'
DG
1
2
1.00
1
C
21.67
0.925
10.183
9.934
B
C1'
DG
2
ATOM
B
C1'
DG
1
2
1.00
1
C
25.04
2.104
11.039
9.357
B
N9
DG
2
ATOM
B
N9
DG
1
2
1.00
1
N
26.34
2.482
11.104
8.040
B
C8
DG
2
ATOM
B
C8
DG
1
2
1.00
1
C
23.93
3.497
11.895
7.834
B
N7
DG
2
ATOM
B
N7
DG
1
2
1.00
1
N
24.08
3.814
12.386
9.091
B
C5
DG
2
ATOM
B
C5
DG
1
2
1.00
1
C
23.78
4.819
13.281
9.490
B
C6
DG
2
ATOM
B
C6
DG
1
2
1.00
1
C
23.32
5.663
13.837
8.770
B
O6
DG
2
ATOM
B
O6
DG
1
2
1.00
1
O
18.91
4.802
13.523
10.881
B
N1
DG
2
ATOM
B
N1
DG
1
2
1.00
1
N
21.17
3.904
12.948
11.737
B
C2
DG
2
ATOM
B
C2
DG
1
2
1.00
1
C
21.07
4.019
13.285
13.045
B
N2
DG
2
ATOM
B
N2
DG
1
2
1.00
1
N
25.74
2.952
12.104
11.373
B
N3
DG
2
ATOM
B
N3
DG
1
2
1.00
1
N
25.99
2.962
11.866
10.044
B
C4
DG
2
ATOM
B
C4
DG
1
2
1.00
1
C
36.24
-2.824
8.784
11.134
B
P
DU
3
ATOM
B
P
DU
1
3
1.00
1
P
38.00
-3.436
7.596
11.834
B
OP1
DU
3
ATOM
B
OP1
DU
1
3
1.00
1
O
62.76
-3.424
9.409
9.886
B
OP2
DU
3
ATOM
B
OP2
DU
1
3
1.00
1
O
34.25
-2.658
9.987
12.155
B
O5'
DU
3
ATOM
B
O5'
DU
1
3
1.00
1
O
25.02
-1.745
10.071
13.224
B
C5'
DU
3
ATOM
B
C5'
DU
1
3
1.00
1
C
26.37
-1.455
11.515
13.562
B
C4'
DU
3
ATOM
B
C4'
DU
1
3
1.00
1
C
22.49
-0.488
12.126
12.715
B
O4'
DU
3
ATOM
B
O4'
DU
1
3
1.00
1
O
30.67
-2.662
12.445
13.612
B
C3'
DU
3
ATOM
B
C3'
DU
1
3
1.00
1
C
34.78
-3.102
12.736
14.931
B
O3'
DU
3
ATOM
B
O3'
DU
1
3
1.00
1
O
12.30
-2.268
13.729
12.957
B
C2'
DU
3
ATOM
B
C2'
DU
1
3
1.00
1
C
19.89
-0.805
13.576
12.637
B
C1'
DU
3
ATOM
B
C1'
DU
1
3
1.00
1
C
32.06
-0.037
14.060
11.491
B
N1
DU
3
ATOM
B
N1
DU
1
3
1.00
1
N
28.89
1.015
14.922
11.734
B
C2
DU
3
ATOM
B
C2
DU
1
3
1.00
1
C
25.57
1.336
15.302
12.845
B
O2
DU
3
ATOM
B
O2
DU
1
3
1.00
1
O
27.17
1.682
15.330
10.616
B
N3
DU
3
ATOM
B
N3
DU
1
3
1.00
1
N
20.48
1.401
14.964
9.313
B
C4
DU
3
ATOM
B
C4
DU
1
3
1.00
1
C
29.55
2.128
15.445
8.451
B
O4
DU
3
ATOM
B
O4
DU
1
3
1.00
1
O
28.58
0.303
14.070
9.130
B
C5
DU
3
ATOM
B
C5
DU
1
3
1.00
1
C
29.60
-0.378
13.645
10.205
B
C6
DU
3
ATOM
B
C6
DU
1
3
1.00
1
C
37.78
-4.035
13.943
15.467
B
P
DA
4
ATOM
B
P
DA
1
4
1.00
1
P
47.92
-4.461
13.525
16.858
B
OP1
DA
4
ATOM
B
OP1
DA
1
4
1.00
1
O
37.75
-5.028
14.363
14.406
B
OP2
DA
4
ATOM
B
OP2
DA
1
4
1.00
1
O
33.43
-2.984
15.140
15.545
B
O5'
DA
4
ATOM
B
O5'
DA
1
4
1.00
1
O
39.47
-1.881
15.118
16.440
B
C5'
DA
4
ATOM
B
C5'
DA
1
4
1.00
1
C
40.35
-1.333
16.521
16.596
B
C4'
DA
4
ATOM
B
C4'
DA
1
4
1.00
1
C
39.42
-0.428
16.906
15.551
B
O4'
DA
4
ATOM
B
O4'
DA
1
4
1.00
1
O
44.95
-2.376
17.619
16.722
B
C3'
DA
4
ATOM
B
C3'
DA
1
4
1.00
1
C
49.26
-2.221
18.481
17.810
B
O3'
DA
4
ATOM
B
O3'
DA
1
4
1.00
1
O
37.38
-2.321
18.396
15.446
B
C2'
DA
4
ATOM
B
C2'
DA
1
4
1.00
1
C
43.82
-0.925
18.132
14.909
B
C1'
DA
4
ATOM
B
C1'
DA
1
4
1.00
1
C
27.85
-0.621
18.115
13.514
B
N9
DA
4
ATOM
B
N9
DA
1
4
1.00
1
N
23.10
-1.341
17.398
12.615
B
C8
DA
4
ATOM
B
C8
DA
1
4
1.00
1
C
24.30
-0.914
17.505
11.381
B
N7
DA
4
ATOM
B
N7
DA
1
4
1.00
1
N
26.87
0.172
18.362
11.491
B
C5
DA
4
ATOM
B
C5
DA
1
4
1.00
1
C
29.59
1.072
18.885
10.537
B
C6
DA
4
ATOM
B
C6
DA
1
4
1.00
1
C
38.34
0.964
18.568
9.241
B
N6
DA
4
ATOM
B
N6
DA
1
4
1.00
1
N
24.96
2.052
19.713
10.941
B
N1
DA
4
ATOM
B
N1
DA
1
4
1.00
1
N
27.47
2.125
20.006
12.251
B
C2
DA
4
ATOM
B
C2
DA
1
4
1.00
1
C
25.32
1.326
19.565
13.221
B
N3
DA
4
ATOM
B
N3
DA
1
4
1.00
1
N
16.39
0.366
18.747
12.799
B
C4
DA
4
ATOM
B
C4
DA
1
4
1.00
1
C
51.97
-2.814
19.928
18.228
B
P
DC
5
ATOM
B
P
DC
1
5
1.00
1
P
54.69
-1.632
20.846
18.436
B
OP1
DC
5
ATOM
B
OP1
DC
1
5
1.00
1
O
68.75
-3.866
19.709
19.281
B
OP2
DC
5
ATOM
B
OP2
DC
1
5
1.00
1
O
66.19
-3.547
20.423
16.932
B
O5'
DC
5
ATOM
B
O5'
DC
1
5
1.00
1
O
70.59
-3.599
21.628
16.250
B
C5'
DC
5
ATOM
B
C5'
DC
1
5
1.00
1
C
61.82
-2.261
22.304
16.135
B
C4'
DC
5
ATOM
B
C4'
DC
1
5
1.00
1
C
47.17
-1.363
21.698
15.184
B
O4'
DC
5
ATOM
B
O4'
DC
1
5
1.00
1
O
53.45
-2.324
23.795
15.774
B
C3'
DC
5
ATOM
B
C3'
DC
1
5
1.00
1
C
60.27
-1.533
24.623
16.610
B
O3'
DC
5
ATOM
B
O3'
DC
1
5
1.00
1
O
43.96
-1.843
23.920
14.378
B
C2'
DC
5
ATOM
B
C2'
DC
1
5
1.00
1
C
39.77
-1.184
22.606
14.056
B
C1'
DC
5
ATOM
B
C1'
DC
1
5
1.00
1
C
38.35
-1.565
21.861
12.855
B
N1
DC
5
ATOM
B
N1
DC
1
5
1.00
1
N
29.54
-0.781
22.105
11.728
B
C2
DC
5
ATOM
B
C2
DC
1
5
1.00
1
C
27.44
0.142
22.908
11.829
B
O2
DC
5
ATOM
B
O2
DC
1
5
1.00
1
O
30.90
-1.084
21.449
10.595
B
N3
DC
5
ATOM
B
N3
DC
1
5
1.00
1
N
35.09
-2.110
20.597
10.585
B
C4
DC
5
ATOM
B
C4
DC
1
5
1.00
1
C
35.84
-2.346
19.984
9.420
B
N4
DC
5
ATOM
B
N4
DC
1
5
1.00
1
N
38.73
-2.918
20.337
11.729
B
C5
DC
5
ATOM
B
C5
DC
1
5
1.00
1
C
41.32
-2.603
21.001
12.856
B
C6
DC
5
ATOM
B
C6
DC
1
5
1.00
1
C
70.76
-2.167
25.979
17.288
B
P
DG
6
ATOM
B
P
DG
1
6
1.00
1
P
80.11
-1.483
26.228
18.609
B
OP1
DG
6
ATOM
B
OP1
DG
1
6
1.00
1
O
35.28
-3.658
25.816
17.113
B
OP2
DG
6
ATOM
B
OP2
DG
1
6
1.00
1
O
71.66
-1.718
27.127
16.276
B
O5'
DG
6
ATOM
B
O5'
DG
1
6
1.00
1
O
57.27
-1.766
27.177
14.882
B
C5'
DG
6
ATOM
B
C5'
DG
1
6
1.00
1
C
48.17
-2.227
28.540
14.390
B
C4'
DG
6
ATOM
B
C4'
DG
1
6
1.00
1
C
46.43
-2.811
28.470
13.062
B
O4'
DG
6
ATOM
B
O4'
DG
1
6
1.00
1
O
51.95
-3.348
29.167
15.272
B
C3'
DG
6
ATOM
B
C3'
DG
1
6
1.00
1
C
51.85
-2.822
29.968
16.318
B
O3'
DG
6
ATOM
B
O3'
DG
1
6
1.00
1
O
51.20
-4.051
30.112
14.315
B
C2'
DG
6
ATOM
B
C2'
DG
1
6
1.00
1
C
39.10
-3.978
29.344
12.998
B
C1'
DG
6
ATOM
B
C1'
DG
1
6
1.00
1
C
29.83
-5.154
28.391
12.586
B
N9
DG
6
ATOM
B
N9
DG
1
6
1.00
1
N
34.80
-6.221
28.053
13.364
B
C8
DG
6
ATOM
B
C8
DG
1
6
1.00
1
C
35.87
-7.068
27.240
12.788
B
N7
DG
6
ATOM
B
N7
DG
1
6
1.00
1
N
41.97
-6.523
27.018
11.525
B
C5
DG
6
ATOM
B
C5
DG
1
6
1.00
1
C
45.06
-6.987
26.222
10.444
B
C6
DG
6
ATOM
B
C6
DG
1
6
1.00
1
C
50.58
-8.012
25.516
10.355
B
O6
DG
6
ATOM
B
O6
DG
1
6
1.00
1
O
39.63
-6.134
26.271
9.337
B
N1
DG
6
ATOM
B
N1
DG
1
6
1.00
1
N
40.31
-4.977
27.005
9.296
B
C2
DG
6
ATOM
B
C2
DG
1
6
1.00
1
C
32.51
-4.300
26.918
8.144
B
N2
DG
6
ATOM
B
N2
DG
1
6
1.00
1
N
40.67
-4.520
27.759
10.299
B
N3
DG
6
ATOM
B
N3
DG
1
6
1.00
1
N
34.92
-5.339
27.724
11.388
B
C4
DG
6
ATOM
B
C4
DG
1
6
1.00
1
C
25.50
14.710
13.324
20.660
A
CO
3CO
40
HETATM
C
CO
3CO
2
0.50
1
CO
48.41
4.763
20.903
4.919
A
BR
BR
41
HETATM
D
BR
BR
3
1.00
1
BR
45.17
3.979
12.205
5.851
B
CO
3CO
43
HETATM
E
CO
3CO
2
1.00
1
CO
39.51
-0.140
13.514
7.305
B
BR
BR
44
HETATM
F
BR
BR
3
1.00
1
BR
56.51
-6.276
20.828
7.114
B
BR
BFA
50
HETATM
A
G
BR
BFA
4
0.50
1
BR
54.11
-0.009
26.596
7.420
B
BR
BFA
50
HETATM
B
G
BR
BFA
4
0.50
1
BR
34.69
-6.365
23.024
11.910
B
C4
BFA
50
HETATM
A
G
C4
BFA
4
0.50
1
C
43.28
-3.311
23.024
5.903
B
C4
BFA
50
HETATM
B
G
C4
BFA
4
0.50
1
C
30.01
-6.108
23.740
13.039
B
C3
BFA
50
HETATM
A
G
C3
BFA
4
0.50
1
C
46.01
-4.262
22.051
5.773
B
C3
BFA
50
HETATM
B
G
C3
BFA
4
0.50
1
C
32.16
-4.996
24.593
13.156
B
C2
BFA
50
HETATM
A
G
C2
BFA
4
0.50
1
C
41.49
-4.985
21.526
6.856
B
C2
BFA
50
HETATM
B
G
C2
BFA
4
0.50
1
C
26.10
-4.120
24.741
12.136
B
C1
BFA
50
HETATM
A
G
C1
BFA
4
0.50
1
C
37.13
-4.740
21.996
8.101
B
C1
BFA
50
HETATM
B
G
C1
BFA
4
0.50
1
C
38.43
-3.434
24.195
9.948
B
N9
BFA
50
HETATM
A
G
N9
BFA
4
0.50
1
N
39.52
-3.547
23.454
9.598
B
N9
BFA
50
HETATM
B
G
N9
BFA
4
0.50
1
N
40.30
-2.661
23.700
7.714
B
C8
BFA
50
HETATM
A
G
C8
BFA
4
0.50
1
C
37.67
-2.330
24.952
11.127
B
C8
BFA
50
HETATM
B
G
C8
BFA
4
0.50
1
C
42.02
-2.804
23.041
6.538
B
C7
BFA
50
HETATM
A
G
C7
BFA
4
0.50
1
C
44.28
-1.389
25.917
11.293
B
C7
BFA
50
HETATM
B
G
C7
BFA
4
0.50
1
C
43.66
-3.910
22.178
6.387
B
C6
BFA
50
HETATM
A
G
C6
BFA
4
0.50
1
C
43.29
-0.685
26.418
10.168
B
C6
BFA
50
HETATM
B
G
C6
BFA
4
0.50
1
C
38.45
-4.810
21.994
7.364
B
C5
BFA
50
HETATM
A
G
C5
BFA
4
0.50
1
C
37.08
-0.931
25.950
8.938
B
C5
BFA
50
HETATM
B
G
C5
BFA
4
0.50
1
C
32.82
-5.466
23.137
10.786
B
C12
BFA
50
HETATM
A
G
C12
BFA
4
0.50
1
C
39.44
-3.030
23.545
7.214
B
C12
BFA
50
HETATM
B
G
C12
BFA
4
0.50
1
C
31.67
-4.336
24.024
10.946
B
C11
BFA
50
HETATM
A
G
C11
BFA
4
0.50
1
C
39.47
-3.776
22.999
8.327
B
C11
BFA
50
HETATM
B
G
C11
BFA
4
0.50
1
C
40.98
-3.586
23.530
8.762
B
C13
BFA
50
HETATM
A
G
C13
BFA
4
0.50
1
C
38.48
-2.615
24.430
9.846
B
C13
BFA
50
HETATM
B
G
C13
BFA
4
0.50
1
C
38.36
-4.702
22.655
8.605
B
C14
BFA
50
HETATM
A
G
C14
BFA
4
0.50
1
C
38.36
-1.900
24.944
8.725
B
C14
BFA
50
HETATM
B
G
C14
BFA
4
0.50
1
C
35.23
-5.598
22.480
9.599
B
N10
BFA
50
HETATM
A
G
N10
BFA
4
0.50
1
N
39.68
-2.102
24.511
7.465
B
N10
BFA
50
HETATM
B
G
N10
BFA
4
0.50
1
N
34.07
-7.560
22.114
11.795
B
CD1
BFA
50
HETATM
A
G
CD1
BFA
4
0.50
1
C
41.26
-2.559
23.560
4.718
B
CD1
BFA
50
HETATM
B
G
CD1
BFA
4
0.50
1
C
40.44
-7.563
21.103
11.093
B
OD1
BFA
50
HETATM
A
G
OD1
BFA
4
0.50
1
O
36.08
-2.048
24.677
4.621
B
OD1
BFA
50
HETATM
B
G
OD1
BFA
4
0.50
1
O
33.17
-8.506
22.281
12.703
B
ND1
BFA
50
HETATM
A
G
ND1
BFA
4
0.50
1
N
40.98
-2.653
22.798
3.630
B
ND1
BFA
50
HETATM
B
G
ND1
BFA
4
0.50
1
N
30.69
-9.254
23.506
12.915
B
CD2
BFA
50
HETATM
A
G
CD2
BFA
4
0.50
1
C
29.34
-1.454
22.457
2.855
B
CD2
BFA
50
HETATM
B
G
CD2
BFA
4
0.50
1
C
32.70
-8.458
24.464
13.785
B
CD3
BFA
50
HETATM
A
G
CD3
BFA
4
0.50
1
C
8.28
-0.837
21.222
3.463
B
CD3
BFA
50
HETATM
B
G
CD3
BFA
4
0.50
1
C
35.69
-9.122
25.770
13.907
B
ND2
BFA
50
HETATM
A
G
ND2
BFA
4
0.50
1
N
16.72
0.516
20.954
3.018
B
ND2
BFA
50
HETATM
B
G
ND2
BFA
4
0.50
1
N
42.07
-10.088
25.725
15.035
B
CD7
BFA
50
HETATM
A
G
CD7
BFA
4
0.50
1
C
34.29
0.530
20.579
1.582
B
CD7
BFA
50
HETATM
B
G
CD7
BFA
4
0.50
1
C
39.41
-9.826
26.077
12.660
B
CD8
BFA
50
HETATM
A
G
CD8
BFA
4
0.50
1
C
35.97
1.102
19.863
3.800
B
CD8
BFA
50
HETATM
B
G
CD8
BFA
4
0.50
1
C
40.30
13.107
14.566
21.016
A
O
HOH
42
HETATM
H
O
HOH
5
1.00
1
O
34.21
13.441
11.689
21.075
A
O
HOH
43
HETATM
H
O
HOH
5
1.00
1
O
29.98
9.799
7.460
15.629
A
O
HOH
44
HETATM
H
O
HOH
5
1.00
1
O
49.60
6.390
17.449
6.564
A
O
HOH
45
HETATM
H
O
HOH
5
1.00
1
O
42.98
11.159
11.539
21.323
A
O
HOH
46
HETATM
H
O
HOH
5
1.00
1
O
86.82
-0.687
17.882
5.668
A
O
HOH
47
HETATM
H
O
HOH
5
1.00
1
O
53.53
9.223
8.796
20.365
A
O
HOH
48
HETATM
H
O
HOH
5
1.00
1
O
33.12
5.838
20.740
2.016
A
O
HOH
49
HETATM
H
O
HOH
5
1.00
1
O
52.62
12.580
22.675
14.866
A
O
HOH
50
HETATM
H
O
HOH
5
1.00
1
O
40.93
15.299
18.834
19.367
A
O
HOH
51
HETATM
H
O
HOH
5
1.00
1
O
34.14
8.452
17.907
3.698
A
O
HOH
52
HETATM
H
O
HOH
5
1.00
1
O
48.36
7.844
20.941
19.966
A
O
HOH
53
HETATM
H
O
HOH
5
1.00
1
O
56.58
12.125
6.762
15.341
A
O
HOH
54
HETATM
H
O
HOH
5
1.00
1
O
58.08
14.162
20.599
18.435
A
O
HOH
55
HETATM
H
O
HOH
5
1.00
1
O
35.36
14.710
17.027
20.660
A
O
HOH
56
HETATM
H
O
HOH
5
0.50
1
O
65.25
12.789
18.741
19.998
A
O
HOH
57
HETATM
H
O
HOH
5
1.00
1
O
54.75
3.817
14.313
5.719
B
O
HOH
51
HETATM
I
O
HOH
5
1.00
1
O
49.01
4.588
10.228
5.301
B
O
HOH
52
HETATM
I
O
HOH
5
1.00
1
O
39.48
4.319
12.550
3.802
B
O
HOH
53
HETATM
I
O
HOH
5
1.00
1
O
34.70
2.037
11.717
5.122
B
O
HOH
54
HETATM
I
O
HOH
5
1.00
1
O
56.42
5.834
12.074
6.840
B
O
HOH
55
HETATM
I
O
HOH
5
1.00
1
O
38.04
-2.887
11.482
18.120
B
O
HOH
56
HETATM
I
O
HOH
5
1.00
1
O
53.00
-6.824
28.671
16.026
B
O
HOH
57
HETATM
I
O
HOH
5
1.00
1
O
51.59
-6.053
12.205
11.928
B
O
HOH
58
HETATM
I
O
HOH
5
1.00
1
O
76.66
2.025
6.383
2.755
B
O
HOH
59
HETATM
I
O
HOH
5
1.00
1
O
39.81
-4.371
18.731
8.679
B
O
HOH
60
HETATM
I
O
HOH
5
1.00
1
O
53.15
-7.207
14.499
2.141
B
O
HOH
61
HETATM
I
O
HOH
5
1.00
1
O
70.53
-12.450
25.733
13.566
B
O
HOH
62
HETATM
I
O
HOH
5
1.00
1
O
30.83
5.351
8.775
8.285
B
O
HOH
63
HETATM
I
O
HOH
5
1.00
1
O
35.38
-1.276
17.573
21.444
B
O
HOH
64
HETATM
I
O
HOH
5
1.00
1
O
51.30
-5.489
25.362
15.798
B
O
HOH
65
HETATM
I
O
HOH
5
1.00
1
O
66.61
-4.255
6.633
-5.005
B
O
HOH
66
HETATM
I
O
HOH
5
1.00
1
O
55.60
-1.719
7.076
5.103
B
O
HOH
67
HETATM
I
O
HOH
5
1.00
1
O
47.64
-5.062
16.367
12.917
B
O
HOH
68
HETATM
I
O
HOH
5
1.00
1
O
65.41
1.119
3.332
3.856
B
O
HOH
69
HETATM
I
O
HOH
5
1.00
1
O
73.43
3.480
3.713
1.915
B
O
HOH
70
HETATM
I
O
HOH
5
1.00
1
O
64.57
-3.956
7.494
6.874
B
O
HOH
71
HETATM
I
O
HOH
5
1.00
1
O
0.2979
0.0000
-0.0699
0.4747
0.0000
0.1962
A
CO
3CO
40
C
CO
3CO
CO
0.8885
0.0709
0.0957
0.5092
0.1062
0.4418
A
BR
BR
41
D
BR
BR
BR
0.6238
-0.0163
0.0281
0.8596
-0.0181
0.2328
B
CO
3CO
43
E
CO
3CO
CO
0.5544
-0.0068
-0.1547
0.5689
-0.0275
0.3778
B
BR
BR
44
F
BR
BR
BR
0.033990
0.000000
0.000000
0.000000
0.018713
0.000000
0.000000
0.000000
0.024201
0.000000
0.000000
0.000000
Cardin, C.J.
Denny, W.A.
Hobbs, J.R.
Thorpe, J.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
29.420
53.440
41.320
Co 3
58.933
COBALT (III) ION
non-polymer
C17 H17 Br N4 O
373.247
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
non-polymer
Br -1
79.904
BROMIDE ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H13 N2 O8 P
308.182
y
2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
CO
N
2
N
BR
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
N
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
Y
16
N
N
N
17
N
C
N
18
N
O
N
19
N
N
N
20
N
C
N
21
N
C
N
22
N
N
N
23
N
C
N
24
N
C
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
BR
N
43
N
O
N
44
N
P
N
45
N
O
N
46
N
O
N
47
N
O
N
48
N
C
N
49
R
C
N
50
N
O
N
51
S
C
N
52
N
O
N
53
N
C
N
54
R
C
Y
55
N
N
Y
56
N
C
Y
57
N
N
Y
58
N
C
Y
59
N
C
N
60
N
N
Y
61
N
N
Y
62
N
C
Y
63
N
N
Y
64
N
C
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
O
N
80
N
P
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
C
N
85
R
C
N
86
N
O
N
87
S
C
N
88
N
O
N
89
N
C
N
90
R
C
N
91
N
N
N
92
N
C
N
93
N
O
N
94
N
N
N
95
N
C
N
96
N
N
N
97
N
C
N
98
N
C
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
O
N
114
N
P
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
O
N
121
S
C
N
122
N
O
N
123
N
C
N
124
R
C
Y
125
N
N
Y
126
N
C
Y
127
N
N
Y
128
N
C
N
129
N
C
N
130
N
O
N
131
N
N
N
132
N
C
N
133
N
N
N
134
N
N
Y
135
N
C
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
O
N
151
N
P
N
152
N
O
N
153
N
O
N
154
N
O
N
155
N
C
N
156
R
C
N
157
N
O
N
158
S
C
N
159
N
O
N
160
N
C
N
161
R
C
N
162
N
N
N
163
N
C
N
164
N
O
N
165
N
N
N
166
N
C
N
167
N
O
N
168
N
C
N
169
N
C
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
O
N
184
N
H
N
185
N
H
N
1
N
sing
Y
2
N
doub
Y
3
N
sing
N
4
N
sing
Y
5
N
sing
N
6
N
sing
Y
7
N
doub
N
8
N
sing
Y
9
N
sing
N
10
N
sing
Y
11
N
doub
Y
12
N
sing
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
Y
16
N
sing
N
17
N
sing
Y
18
N
doub
N
19
N
sing
Y
20
N
sing
Y
21
N
sing
Y
22
N
doub
Y
23
N
doub
Y
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
Y
66
N
sing
Y
67
N
sing
Y
68
N
doub
N
69
N
sing
Y
70
N
sing
Y
71
N
sing
Y
72
N
doub
N
73
N
sing
Y
74
N
doub
N
75
N
sing
N
76
N
sing
Y
77
N
sing
Y
78
N
doub
N
79
N
sing
Y
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
Y
139
N
sing
Y
140
N
sing
Y
141
N
doub
N
142
N
sing
Y
143
N
sing
N
144
N
sing
Y
145
N
doub
N
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
39
15055
15061
10.1021/bi001749p
11106483
Guanine specific binding at a DNA junction formed by d[CG(5-BrU)ACG](2) with a topoisomerase poison in the presence of Co(2+) ions.
2000
10.2210/pdb1eg6/pdb
pdb_00001eg6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1999-12-06
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9000
1.0
X31
EMBL/DESY, HAMBURG
0.9000
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X31
1795.191
5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3'
2
syn
polymer
58.933
COBALT (III) ION
2
syn
non-polymer
79.904
BROMIDE ION
2
syn
non-polymer
373.247
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
1
syn
non-polymer
18.015
water
37
nat
water
no
no
(DC)(DG)(DU)(DA)(DC)(DG)
CGUACG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
1
2.15
42.71
VAPOR DIFFUSION, SITTING DROP
7.5
DROP: SODIUM CACODYLATE BUFFER, MAGNESIUM ACETATE, COBALT CHLORIDE, SPERMINE, MPD RESERVOIR: MPD, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 279K
279
SODIUM CACODYLATE
1
MAGNESIUM ACETATE
1
CoCl3
1
SPERMINE
1
MPD
1
MPD
2
-8.892
1
19
A
2
B
5
9.981
A_DG2:DC5_B
1
3.297
-0.642
-0.246
-0.057
3.861
1
20
A
3
B
4
-0.991
A_DU3:DA4_B
2
2.658
0.071
-0.352
-0.035
-3.117
1
20
A
4
B
3
5.705
A_DA4:DU3_B
3
-0.497
0.047
0.137
0.069
9.797
1
19
A
5
B
2
-0.488
A_DC5:DG2_B
4
9.877
0.344
-0.175
-0.161
2.850
29.341
A
A
2
3
10.908
B
B
5
4
3.025
5.491
-1.174
-0.340
AA_DG2DU3:DA4DC5_BB
1
1.478
-2.937
28.797
-1.743
2.606
3.282
37.581
A
A
3
4
2.412
B
B
4
3
3.364
1.549
0.198
-0.568
AA_DU3DA4:DU3DA4_BB
2
-5.220
8.129
37.199
-1.088
-1.002
3.144
26.215
A
A
4
5
6.583
B
B
3
2
3.209
2.971
0.091
-0.259
AA_DA4DC5:DG2DU3_BB
3
3.556
-7.880
25.810
-1.356
0.740
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-01-03
1
1
2007-10-16
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-02-14
REL
3CO
COBALT (III) ION
BR
BROMIDE ION
BFA
9-BROMO-PHENAZINE-1-CARBOXYLIC ACID (2-DIMETHYLAMINO-ETHYL)-AMIDE
HOH
water
3CO
40
2
3CO
3CO
40
A
BRO
3
3
BR
BR
41
A
3CO
43
2
3CO
3CO
43
B
BRO
3
3
BR
BR
44
B
BFA
50
4
BFA
BFA
50
B
HOH
41
5
HOH
HOH
42
A
HOH
42
5
HOH
HOH
43
A
HOH
1
5
HOH
HOH
44
A
HOH
2
5
HOH
HOH
45
A
HOH
6
5
HOH
HOH
46
A
HOH
7
5
HOH
HOH
47
A
HOH
9
5
HOH
HOH
48
A
HOH
11
5
HOH
HOH
49
A
HOH
15
5
HOH
HOH
50
A
HOH
16
5
HOH
HOH
51
A
HOH
21
5
HOH
HOH
52
A
HOH
25
5
HOH
HOH
53
A
HOH
29
5
HOH
HOH
54
A
HOH
31
5
HOH
HOH
55
A
HOH
32
5
HOH
HOH
56
A
HOH
33
5
HOH
HOH
57
A
HOH
44
5
HOH
HOH
51
B
HOH
45
5
HOH
HOH
52
B
HOH
46
5
HOH
HOH
53
B
HOH
47
5
HOH
HOH
54
B
HOH
48
5
HOH
HOH
55
B
HOH
3
5
HOH
HOH
56
B
HOH
4
5
HOH
HOH
57
B
HOH
10
5
HOH
HOH
58
B
HOH
12
5
HOH
HOH
59
B
HOH
13
5
HOH
HOH
60
B
HOH
14
5
HOH
HOH
61
B
HOH
17
5
HOH
HOH
62
B
HOH
18
5
HOH
HOH
63
B
HOH
19
5
HOH
HOH
64
B
HOH
20
5
HOH
HOH
65
B
HOH
22
5
HOH
HOH
66
B
HOH
24
5
HOH
HOH
67
B
HOH
26
5
HOH
HOH
68
B
HOH
27
5
HOH
HOH
69
B
HOH
28
5
HOH
HOH
70
B
HOH
30
5
HOH
HOH
71
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
U
3
n
3
DU
3
A
A
4
n
4
DA
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
n
1
1
B
G
2
n
2
DG
2
B
U
3
n
3
DU
3
B
A
4
n
4
DA
4
B
C
5
n
5
DC
5
B
G
6
n
6
DG
6
B
author_defined_assembly
2
dimeric
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
42
H
O
HOH
1_555
81.0
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
90.1
A
HOH
42
H
O
HOH
1_555
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
88.0
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
51
I
O
HOH
1_555
101.0
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
100.1
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
157.6
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
175.7
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
77.8
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
81.7
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
94.7
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
97.9
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
87.7
B
HOH
53
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
81.5
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
75.2
B
HOH
51
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
99.1
B
HOH
52
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
79.2
B
HOH
53
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
109.0
B
HOH
54
I
O
HOH
1_555
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
161.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
3CO
40
C
3CO
1
B
BFA
50
G
BFA
1
A
HOH
56
H
HOH
1
B
DC
1
B
DC
1
1
Y
1
A
A
C5
BR
DU
BR
3
41
1.96
1
B
B
C5
BR
DU
BR
3
44
1.96
1
9.67
1.40
114.30
123.97
A
A
A
N1
C1'
C2'
DC
DC
DC
1
1
1
N
1
-5.65
0.70
108.00
102.35
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
11.32
1.60
120.90
132.22
A
A
A
P
O5'
C5'
DU
DU
DU
3
3
3
N
1
7.37
1.10
109.80
117.17
A
A
A
C5'
C4'
O4'
DU
DU
DU
3
3
3
N
1
-4.05
0.60
125.90
121.85
A
A
A
C5
C4
O4
DU
DU
DU
3
3
3
N
1
17.67
1.20
119.70
137.37
A
A
A
C3'
O3'
P
DU
DU
DA
3
3
4
Y
1
-4.65
0.70
108.00
103.35
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
14.49
1.40
114.30
128.79
A
A
A
N1
C1'
C2'
DC
DC
DC
5
5
5
N
1
9.03
1.20
119.70
128.73
A
A
A
C3'
O3'
P
DC
DC
DG
5
5
6
Y
1
-7.69
0.70
108.00
100.31
A
A
A
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
9.86
1.40
114.30
124.16
B
B
B
N9
C1'
C2'
DG
DG
DG
2
2
2
N
1
-9.52
0.70
108.00
98.48
B
B
B
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
15.75
1.40
114.30
130.05
B
B
B
N1
C1'
C2'
DU
DU
DU
3
3
3
N
1
10.05
1.20
119.70
129.75
B
B
B
C3'
O3'
P
DU
DU
DA
3
3
4
Y
1
8.60
1.40
114.30
122.90
B
B
B
N9
C1'
C2'
DA
DA
DA
4
4
4
N
1
1.86
0.30
108.30
110.16
B
B
B
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
3.33
0.50
110.60
113.93
B
B
B
C2
N3
C4
DA
DA
DA
4
4
4
N
1
15.71
1.20
119.70
135.41
B
B
B
C3'
O3'
P
DA
DA
DC
4
4
5
Y
1
13.40
1.60
120.90
134.30
B
B
B
P
O5'
C5'
DC
DC
DC
5
5
5
N
1
2.74
0.40
120.30
123.04
B
B
B
C6
N1
C2
DC
DC
DC
5
5
5
N
1
9.63
1.60
120.90
130.53
B
B
B
P
O5'
C5'
DG
DG
DG
6
6
6
N
1
A
A
C1'
N9
DG
DG
2
2
0.099
0.013
1.488
1.587
N
1
A
A
O4'
C1'
DU
DU
3
3
0.072
0.011
1.420
1.492
N
1
A
A
O4'
C1'
DA
DA
4
4
0.068
0.011
1.420
1.488
N
1
A
A
O4'
C1'
DG
DG
6
6
0.074
0.011
1.420
1.494
N
1
A
A
C1'
N9
DG
DG
6
6
0.103
0.013
1.488
1.591
N
1
B
B
C1'
N9
DG
DG
2
2
0.079
0.013
1.488
1.567
N
1
B
B
O4'
C1'
DU
DU
3
3
0.066
0.011
1.420
1.486
N
1
B
B
C1'
N9
DG
DG
6
6
0.081
0.013
1.488
1.569
N
0.3469
0.2276
0.2501
0.2276
2.00
15.00
104
2091
1566
6.6
78.81
RANDOM
1
THROUGHOUT
4.
2.
0
2.00
15.00
37
309
50
222
0
29.312
2.00
15.00
1EG6
2360
1566
4.
2.
0.059
1
8.35
4.79
78.8
0.026
2.00
1.29
72.6
phasing
SOLVE
refinement
SHELXL-97
data reduction
DENZO
data scaling
CCP4
(SCALA)
CRYSTAL STRUCTURE ANALYSIS OF D(CG(5-BRU)ACG) COMPLEXES TO A PHENAZINE
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
metalc
2.079
A
DG
6
A
N7
DG
6
1_555
A
3CO
40
C
CO
3CO
1_555
metalc
2.059
A
3CO
40
C
CO
3CO
1_555
A
HOH
42
H
O
HOH
1_555
metalc
2.111
A
3CO
40
C
CO
3CO
1_555
A
HOH
43
H
O
HOH
1_555
metalc
2.064
B
DG
2
B
N7
DG
2
1_555
B
3CO
43
E
CO
3CO
1_555
metalc
2.118
B
3CO
43
E
CO
3CO
1_555
B
HOH
51
I
O
HOH
1_555
metalc
2.141
B
3CO
43
E
CO
3CO
1_555
B
HOH
52
I
O
HOH
1_555
metalc
2.105
B
3CO
43
E
CO
3CO
1_555
B
HOH
53
I
O
HOH
1_555
metalc
2.131
B
3CO
43
E
CO
3CO
1_555
B
HOH
54
I
O
HOH
1_555
metalc
2.106
B
3CO
43
E
CO
3CO
1_555
B
HOH
55
I
O
HOH
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
5
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
5
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
5
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DU
3
A
N3
DU
3
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DU
3
A
O4
DU
3
1_555
B
DA
4
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DU
3
B
N3
DU
3
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DU
3
B
O4
DU
3
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
2
B
N2
DG
2
1_555
DNA
DRUG-DNA COMPLEX, INTERCALATION, MAJOR GROOVE BINDING, DOUBLE HELIX, DNA
1EG6
PDB
1
1EG6
1
6
1EG6
1
6
1EG6
A
1
1
6
1
6
1EG6
1
6
1EG6
B
1
1
6
BINDING SITE FOR RESIDUE 3CO A 40
A
3CO
40
Software
6
BINDING SITE FOR RESIDUE 3CO B 43
B
3CO
43
Software
6
BINDING SITE FOR RESIDUE BR A 41
A
BR
41
Software
3
BINDING SITE FOR RESIDUE BR B 44
B
BR
44
Software
2
BINDING SITE FOR RESIDUE BFA B 50
B
BFA
50
Software
8
A
DG
6
A
DG
6
6
1_555
A
DG
6
A
DG
6
6
3_656
A
HOH
42
H
HOH
6
3_656
A
HOH
42
H
HOH
6
1_555
A
HOH
43
H
HOH
6
3_656
A
HOH
43
H
HOH
6
1_555
B
DG
2
B
DG
2
6
1_555
B
HOH
51
I
HOH
6
1_555
B
HOH
52
I
HOH
6
1_555
B
HOH
53
I
HOH
6
1_555
B
HOH
54
I
HOH
6
1_555
B
HOH
55
I
HOH
6
1_555
A
DG
2
A
DG
2
3
1_555
A
DU
3
A
DU
3
3
1_555
A
HOH
49
H
HOH
3
1_555
B
DG
2
B
DG
2
2
1_555
B
DU
3
B
DU
3
2
1_555
A
DC
1
A
DC
1
8
3_555
A
DG
2
A
DG
2
8
1_555
A
DG
2
A
DG
2
8
2_565
A
DA
4
A
DA
4
8
2_565
B
DC
5
B
DC
5
8
1_555
B
DG
6
B
DG
6
8
1_555
B
HOH
62
I
HOH
8
1_555
B
HOH
65
I
HOH
8
1_555
21
orthorhombic
C 2 2 2