0.014810
0.000000
0.000000
0.000000
0.014810
0.000000
0.000000
0.000000
0.007757
0.00000
0.00000
0.00000
Bellizzi III, J.J.
Widom, J.
Kemp, C.
Lu, J.Y.
Das, A.K.
Hofmann, S.L.
Clardy, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
67.520
67.520
128.920
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C16 H32 O2
256.424
PALMITIC ACID
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
R
C
N
251
R
C
N
252
R
C
N
253
S
C
N
254
R
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
O
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
C
N
304
N
O
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
C
N
319
N
C
N
320
N
C
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
N
358
N
C
N
359
N
C
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
N
375
N
O
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
N
N
385
S
C
N
386
N
C
N
387
N
O
N
388
R
C
N
389
N
O
N
390
N
C
N
391
N
O
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
Y
409
N
N
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
N
439
N
O
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
N
N
453
S
C
N
454
N
C
N
455
N
O
N
456
N
C
N
457
N
C
N
458
N
C
N
459
N
O
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
doub
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
Y
401
N
sing
Y
402
N
sing
N
403
N
sing
Y
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
doub
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
Y
424
N
doub
Y
425
N
sing
Y
426
N
sing
N
427
N
sing
Y
428
N
doub
N
429
N
sing
Y
430
N
doub
N
431
N
sing
Y
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
4573
4578
10.1073/pnas.080508097
10781062
The crystal structure of palmitoyl protein thioesterase 1 and the molecular basis of infantile neuronal ceroid lipofuscinosis.
2000
UK
Nature
NATUAS
0006
0028-0836
376
584
587
10.1038/376584a0
Mutations in the Palmitoyl Protein Thioesterase Gene Causing Infantile Neuronal Ceroid Lipofuscinosis
1995
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
268
22566
22574
Purification and Properties of a Palmitoyl Protein Thioesterase that Cleaves Palmitate from H-Ras
1993
10.2210/pdb1eh5/pdb
pdb_00001eh5
NAG B 1 HAS WRONG CHIRALITY AT ATOM C1
NAG A 400 HAS WRONG CHIRALITY AT ATOM C1
NAG A 410 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
1999-03-06
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.0088
1.0
14-BM-D
APS
1.0088
SYNCHROTRON
APS BEAMLINE 14-BM-D
31447.111
PALMITOYL PROTEIN THIOESTERASE 1
3.1.2.22
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
non-polymer
256.424
PALMITIC ACID
1
syn
non-polymer
18.015
water
36
nat
water
no
no
DPPAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQ
GYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWH
DPIREDIYRNHSIFLADINQERGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQD
RLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE
DPPAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQ
GYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWH
DPIREDIYRNHSIFLADINQERGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQD
RLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
fall armyworm
Spodoptera
sample
10 L BIOREACTOR
9913
Bos taurus
SF21 CELLS
7108
Spodoptera frugiperda
1
2.041
39.79
VAPOR DIFFUSION, SITTING DROP
6.5
55% Polypropylene Glycol 400, 100 mM Bis-Tris pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 20.0K
293.0
software
citation_author
citation_author
exptl_crystal_grow
exptl_crystal_grow
atom_site
chem_comp
database_PDB_caveat
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_chiral
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Refinement description
Database references
Database references
Experimental preparation
Experimental preparation
Advisory
Atomic model
Data collection
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2000-04-26
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2018-01-24
1
5
2018-01-31
1
6
2018-02-28
2
0
2020-07-29
2
1
2023-08-09
_software.name
_citation_author.name
_citation_author.name
_exptl_crystal_grow.pdbx_details
_exptl_crystal_grow.temp
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
NAG
420
n
B
NAG
1
NAG
421
n
B
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Crystal structure of Palmitoyl Protein Thioesterase 1
RCSB
Y
RCSB
2000-02-18
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][a-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
PLM
PALMITIC ACID
HOH
water
Asn197, Asn212 and Asn232 are glycosylated.
The OG of Ser115 is covalently modified by palmitate.
1EI9
1ei9 (uncomplexed ppt1)
PDB
experimental model
NAG
400
3
NAG
NAG
400
A
NAG
410
3
NAG
NAG
410
A
PLM
430
4
PLM
PLM
430
A
WAT
500
5
HOH
HOH
500
A
WAT
501
5
HOH
HOH
501
A
WAT
502
5
HOH
HOH
502
A
WAT
503
5
HOH
HOH
503
A
WAT
504
5
HOH
HOH
504
A
WAT
505
5
HOH
HOH
505
A
WAT
506
5
HOH
HOH
506
A
WAT
507
5
HOH
HOH
507
A
WAT
508
5
HOH
HOH
508
A
WAT
509
5
HOH
HOH
509
A
WAT
510
5
HOH
HOH
510
A
WAT
511
5
HOH
HOH
511
A
WAT
512
5
HOH
HOH
512
A
WAT
513
5
HOH
HOH
513
A
WAT
514
5
HOH
HOH
514
A
WAT
515
5
HOH
HOH
515
A
WAT
516
5
HOH
HOH
516
A
WAT
517
5
HOH
HOH
517
A
WAT
518
5
HOH
HOH
518
A
WAT
519
5
HOH
HOH
519
A
WAT
520
5
HOH
HOH
520
A
WAT
521
5
HOH
HOH
521
A
WAT
522
5
HOH
HOH
522
A
WAT
523
5
HOH
HOH
523
A
WAT
524
5
HOH
HOH
524
A
WAT
525
5
HOH
HOH
525
A
WAT
526
5
HOH
HOH
526
A
WAT
527
5
HOH
HOH
527
A
WAT
528
5
HOH
HOH
528
A
WAT
529
5
HOH
HOH
529
A
WAT
530
5
HOH
HOH
530
A
WAT
531
5
HOH
HOH
531
A
WAT
532
5
HOH
HOH
532
A
WAT
533
5
HOH
HOH
533
A
WAT
534
5
HOH
HOH
534
A
WAT
535
5
HOH
HOH
535
A
ASP
28
n
1
ASP
28
A
PRO
29
n
2
PRO
29
A
PRO
30
n
3
PRO
30
A
ALA
31
n
4
ALA
31
A
PRO
32
n
5
PRO
32
A
LEU
33
n
6
LEU
33
A
PRO
34
n
7
PRO
34
A
LEU
35
n
8
LEU
35
A
VAL
36
n
9
VAL
36
A
ILE
37
n
10
ILE
37
A
TRP
38
n
11
TRP
38
A
HIS
39
n
12
HIS
39
A
GLY
40
n
13
GLY
40
A
MET
41
n
14
MET
41
A
GLY
42
n
15
GLY
42
A
ASP
43
n
16
ASP
43
A
SER
44
n
17
SER
44
A
CYS
45
n
18
CYS
45
A
CYS
46
n
19
CYS
46
A
ASN
47
n
20
ASN
47
A
PRO
48
n
21
PRO
48
A
LEU
49
n
22
LEU
49
A
SER
50
n
23
SER
50
A
MET
51
n
24
MET
51
A
GLY
52
n
25
GLY
52
A
ALA
53
n
26
ALA
53
A
ILE
54
n
27
ILE
54
A
LYS
55
n
28
LYS
55
A
LYS
56
n
29
LYS
56
A
MET
57
n
30
MET
57
A
VAL
58
n
31
VAL
58
A
GLU
59
n
32
GLU
59
A
LYS
60
n
33
LYS
60
A
LYS
61
n
34
LYS
61
A
ILE
62
n
35
ILE
62
A
PRO
63
n
36
PRO
63
A
GLY
64
n
37
GLY
64
A
ILE
65
n
38
ILE
65
A
HIS
66
n
39
HIS
66
A
VAL
67
n
40
VAL
67
A
LEU
68
n
41
LEU
68
A
SER
69
n
42
SER
69
A
LEU
70
n
43
LEU
70
A
GLU
71
n
44
GLU
71
A
ILE
72
n
45
ILE
72
A
GLY
73
n
46
GLY
73
A
LYS
74
n
47
LYS
74
A
THR
75
n
48
THR
75
A
LEU
76
n
49
LEU
76
A
ARG
77
n
50
ARG
77
A
GLU
78
n
51
GLU
78
A
ASP
79
n
52
ASP
79
A
VAL
80
n
53
VAL
80
A
GLU
81
n
54
GLU
81
A
ASN
82
n
55
ASN
82
A
SER
83
n
56
SER
83
A
PHE
84
n
57
PHE
84
A
PHE
85
n
58
PHE
85
A
LEU
86
n
59
LEU
86
A
ASN
87
n
60
ASN
87
A
VAL
88
n
61
VAL
88
A
ASN
89
n
62
ASN
89
A
SER
90
n
63
SER
90
A
GLN
91
n
64
GLN
91
A
VAL
92
n
65
VAL
92
A
THR
93
n
66
THR
93
A
THR
94
n
67
THR
94
A
VAL
95
n
68
VAL
95
A
CYS
96
n
69
CYS
96
A
GLN
97
n
70
GLN
97
A
ILE
98
n
71
ILE
98
A
LEU
99
n
72
LEU
99
A
ALA
100
n
73
ALA
100
A
LYS
101
n
74
LYS
101
A
ASP
102
n
75
ASP
102
A
PRO
103
n
76
PRO
103
A
LYS
104
n
77
LYS
104
A
LEU
105
n
78
LEU
105
A
GLN
106
n
79
GLN
106
A
GLN
107
n
80
GLN
107
A
GLY
108
n
81
GLY
108
A
TYR
109
n
82
TYR
109
A
ASN
110
n
83
ASN
110
A
ALA
111
n
84
ALA
111
A
MET
112
n
85
MET
112
A
GLY
113
n
86
GLY
113
A
PHE
114
n
87
PHE
114
A
SER
115
n
88
SER
115
A
GLN
116
n
89
GLN
116
A
GLY
117
n
90
GLY
117
A
GLY
118
n
91
GLY
118
A
GLN
119
n
92
GLN
119
A
PHE
120
n
93
PHE
120
A
LEU
121
n
94
LEU
121
A
ARG
122
n
95
ARG
122
A
ALA
123
n
96
ALA
123
A
VAL
124
n
97
VAL
124
A
ALA
125
n
98
ALA
125
A
GLN
126
n
99
GLN
126
A
ARG
127
n
100
ARG
127
A
CYS
128
n
101
CYS
128
A
PRO
129
n
102
PRO
129
A
SER
130
n
103
SER
130
A
PRO
131
n
104
PRO
131
A
PRO
132
n
105
PRO
132
A
MET
133
n
106
MET
133
A
VAL
134
n
107
VAL
134
A
ASN
135
n
108
ASN
135
A
LEU
136
n
109
LEU
136
A
ILE
137
n
110
ILE
137
A
SER
138
n
111
SER
138
A
VAL
139
n
112
VAL
139
A
GLY
140
n
113
GLY
140
A
GLY
141
n
114
GLY
141
A
GLN
142
n
115
GLN
142
A
HIS
143
n
116
HIS
143
A
GLN
144
n
117
GLN
144
A
GLY
145
n
118
GLY
145
A
VAL
146
n
119
VAL
146
A
PHE
147
n
120
PHE
147
A
GLY
148
n
121
GLY
148
A
LEU
149
n
122
LEU
149
A
PRO
150
n
123
PRO
150
A
ARG
151
n
124
ARG
151
A
CYS
152
n
125
CYS
152
A
PRO
153
n
126
PRO
153
A
GLY
154
n
127
GLY
154
A
GLU
155
n
128
GLU
155
A
SER
156
n
129
SER
156
A
SER
157
n
130
SER
157
A
HIS
158
n
131
HIS
158
A
ILE
159
n
132
ILE
159
A
CYS
160
n
133
CYS
160
A
ASP
161
n
134
ASP
161
A
PHE
162
n
135
PHE
162
A
ILE
163
n
136
ILE
163
A
ARG
164
n
137
ARG
164
A
LYS
165
n
138
LYS
165
A
THR
166
n
139
THR
166
A
LEU
167
n
140
LEU
167
A
ASN
168
n
141
ASN
168
A
ALA
169
n
142
ALA
169
A
GLY
170
n
143
GLY
170
A
ALA
171
n
144
ALA
171
A
TYR
172
n
145
TYR
172
A
ASN
173
n
146
ASN
173
A
LYS
174
n
147
LYS
174
A
ALA
175
n
148
ALA
175
A
ILE
176
n
149
ILE
176
A
GLN
177
n
150
GLN
177
A
GLU
178
n
151
GLU
178
A
ARG
179
n
152
ARG
179
A
LEU
180
n
153
LEU
180
A
VAL
181
n
154
VAL
181
A
GLN
182
n
155
GLN
182
A
ALA
183
n
156
ALA
183
A
GLU
184
n
157
GLU
184
A
TYR
185
n
158
TYR
185
A
TRP
186
n
159
TRP
186
A
HIS
187
n
160
HIS
187
A
ASP
188
n
161
ASP
188
A
PRO
189
n
162
PRO
189
A
ILE
190
n
163
ILE
190
A
ARG
191
n
164
ARG
191
A
GLU
192
n
165
GLU
192
A
ASP
193
n
166
ASP
193
A
ILE
194
n
167
ILE
194
A
TYR
195
n
168
TYR
195
A
ARG
196
n
169
ARG
196
A
ASN
197
n
170
ASN
197
A
HIS
198
n
171
HIS
198
A
SER
199
n
172
SER
199
A
ILE
200
n
173
ILE
200
A
PHE
201
n
174
PHE
201
A
LEU
202
n
175
LEU
202
A
ALA
203
n
176
ALA
203
A
ASP
204
n
177
ASP
204
A
ILE
205
n
178
ILE
205
A
ASN
206
n
179
ASN
206
A
GLN
207
n
180
GLN
207
A
GLU
208
n
181
GLU
208
A
ARG
209
n
182
ARG
209
A
GLY
210
n
183
GLY
210
A
VAL
211
n
184
VAL
211
A
ASN
212
n
185
ASN
212
A
GLU
213
n
186
GLU
213
A
SER
214
n
187
SER
214
A
TYR
215
n
188
TYR
215
A
LYS
216
n
189
LYS
216
A
LYS
217
n
190
LYS
217
A
ASN
218
n
191
ASN
218
A
LEU
219
n
192
LEU
219
A
MET
220
n
193
MET
220
A
ALA
221
n
194
ALA
221
A
LEU
222
n
195
LEU
222
A
LYS
223
n
196
LYS
223
A
LYS
224
n
197
LYS
224
A
PHE
225
n
198
PHE
225
A
VAL
226
n
199
VAL
226
A
MET
227
n
200
MET
227
A
VAL
228
n
201
VAL
228
A
LYS
229
n
202
LYS
229
A
PHE
230
n
203
PHE
230
A
LEU
231
n
204
LEU
231
A
ASN
232
n
205
ASN
232
A
ASP
233
n
206
ASP
233
A
THR
234
n
207
THR
234
A
ILE
235
n
208
ILE
235
A
VAL
236
n
209
VAL
236
A
ASP
237
n
210
ASP
237
A
PRO
238
n
211
PRO
238
A
VAL
239
n
212
VAL
239
A
ASP
240
n
213
ASP
240
A
SER
241
n
214
SER
241
A
GLU
242
n
215
GLU
242
A
TRP
243
n
216
TRP
243
A
PHE
244
n
217
PHE
244
A
GLY
245
n
218
GLY
245
A
PHE
246
n
219
PHE
246
A
TYR
247
n
220
TYR
247
A
ARG
248
n
221
ARG
248
A
SER
249
n
222
SER
249
A
GLY
250
n
223
GLY
250
A
GLN
251
n
224
GLN
251
A
ALA
252
n
225
ALA
252
A
LYS
253
n
226
LYS
253
A
GLU
254
n
227
GLU
254
A
THR
255
n
228
THR
255
A
ILE
256
n
229
ILE
256
A
PRO
257
n
230
PRO
257
A
LEU
258
n
231
LEU
258
A
GLN
259
n
232
GLN
259
A
GLU
260
n
233
GLU
260
A
SER
261
n
234
SER
261
A
THR
262
n
235
THR
262
A
LEU
263
n
236
LEU
263
A
TYR
264
n
237
TYR
264
A
THR
265
n
238
THR
265
A
GLN
266
n
239
GLN
266
A
ASP
267
n
240
ASP
267
A
ARG
268
n
241
ARG
268
A
LEU
269
n
242
LEU
269
A
GLY
270
n
243
GLY
270
A
LEU
271
n
244
LEU
271
A
LYS
272
n
245
LYS
272
A
ALA
273
n
246
ALA
273
A
MET
274
n
247
MET
274
A
ASP
275
n
248
ASP
275
A
LYS
276
n
249
LYS
276
A
ALA
277
n
250
ALA
277
A
GLY
278
n
251
GLY
278
A
GLN
279
n
252
GLN
279
A
LEU
280
n
253
LEU
280
A
VAL
281
n
254
VAL
281
A
PHE
282
n
255
PHE
282
A
LEU
283
n
256
LEU
283
A
ALA
284
n
257
ALA
284
A
LEU
285
n
258
LEU
285
A
GLU
286
n
259
GLU
286
A
GLY
287
n
260
GLY
287
A
ASP
288
n
261
ASP
288
A
HIS
289
n
262
HIS
289
A
LEU
290
n
263
LEU
290
A
GLN
291
n
264
GLN
291
A
LEU
292
n
265
LEU
292
A
SER
293
n
266
SER
293
A
GLU
294
n
267
GLU
294
A
GLU
295
n
268
GLU
295
A
TRP
296
n
269
TRP
296
A
PHE
297
n
270
PHE
297
A
TYR
298
n
271
TYR
298
A
ALA
299
n
272
ALA
299
A
HIS
300
n
273
HIS
300
A
ILE
301
n
274
ILE
301
A
ILE
302
n
275
ILE
302
A
PRO
303
n
276
PRO
303
A
PHE
304
n
277
PHE
304
A
LEU
305
n
278
LEU
305
A
GLU
306
n
279
GLU
306
A
author_defined_assembly
1
monomeric
A
ASN
197
GLYCOSYLATION SITE
A
ASN
170
ASN
A
ASN
232
GLYCOSYLATION SITE
A
ASN
205
ASN
A
ASN
212
GLYCOSYLATION SITE
A
ASN
185
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
68
A
N
LEU
41
A
O
LEU
35
A
O
LEU
8
A
N
VAL
36
A
N
VAL
9
A
O
ASN
110
A
O
ASN
83
A
O
TYR
109
A
O
TYR
82
A
N
VAL
134
A
N
VAL
107
A
N
LEU
136
A
N
LEU
109
A
O
LYS
224
A
O
LYS
197
A
N
MET
227
A
N
MET
200
A
O
VAL
281
A
O
VAL
254
A
O
PHE
246
A
O
PHE
219
A
N
ILE
256
A
N
ILE
229
1
B
C1
NAG
1
WRONG HAND
1
A
C1
NAG
400
WRONG HAND
1
A
C1
NAG
410
WRONG HAND
1
A
PRO
30
-42.00
-75.52
1
A
ALA
31
-25.51
-54.46
1
A
SER
50
-97.10
-78.93
1
A
SER
115
57.69
-125.69
1
A
VAL
134
-103.09
-79.04
1
A
PHE
147
-151.26
74.78
1
A
LEU
167
-130.27
-32.40
1
A
ALA
171
-48.52
-18.88
1
A
ILE
190
-71.67
-78.75
1
A
PHE
201
-125.58
-75.38
1
A
GLU
295
-43.53
-70.93
protein_rep.param
protein.top
carbohydrate.param
water.top
water_rep.param
carbohydrate.top
31.80
0.00
0.00
0.00
0.00
0.00
0.00
Used simulated annealing, energy minimization, individual B-factor refinement.
Used isotropic B-factor correction and bulk solvent correction.
0.27
0.012
0.2262
0.2337
0.2337
2.50
20.0
512
10900
10620
4.8
97.4
Random
1390208.41
1
THROUGHOUT
0.00
0.00
difference fourier
1ei9 (uncomplexed ppt1)
Generated parameter/topology files for palmitate with XPLO2D
flat model
49.5058
0.34248
0.42
0.34
5.00
0.39
0.33
2.50
20.0
36
2319
73
0
2210
1.4
0.008
23.1
0.83
2.09
1.50
3.36
2.00
1.80
2.00
3.04
2.50
0.374
0.039
0.318
2.66
92
1628
5.3
97.9
43.8
2.500
21.064
1EH5
47325
46474
0.0
0.0
0.148
1
10.1
4.4
98.2
0.362
2.50
2.64
1507
1
4.2
97.8
data reduction
MOSFLM
data scaling
SCALA
data reduction
TRUNCATE
refinement
CNS
data scaling
CCP4
(SCALA
data scaling
TRUNCATE
phasing
CNS
CRYSTAL STRUCTURE OF PALMITOYL PROTEIN THIOESTERASE 1 COMPLEXED WITH PALMITATE
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
A
SER
50
A
SER
23
HELX_P
A
ILE
62
A
ILE
35
1
1
13
A
THR
75
A
THR
48
HELX_P
A
LEU
86
A
LEU
59
1
2
12
A
ASN
87
A
ASN
60
HELX_P
A
LYS
101
A
LYS
74
1
3
15
A
ASP
102
A
ASP
75
HELX_P
A
GLN
106
A
GLN
79
5
4
5
A
GLN
116
A
GLN
89
HELX_P
A
CYS
128
A
CYS
101
1
5
13
A
SER
157
A
SER
130
HELX_P
A
THR
166
A
THR
139
1
6
10
A
ASN
173
A
ASN
146
HELX_P
A
GLU
178
A
GLU
151
1
7
6
A
VAL
181
A
VAL
154
HELX_P
A
TYR
185
A
TYR
158
5
8
5
A
ARG
191
A
ARG
164
HELX_P
A
SER
199
A
SER
172
1
9
9
A
PHE
201
A
PHE
174
HELX_P
A
ASN
206
A
ASN
179
1
10
6
A
ASN
212
A
ASN
185
HELX_P
A
ALA
221
A
ALA
194
1
11
10
A
PRO
238
A
PRO
211
HELX_P
A
PHE
244
A
PHE
217
5
12
7
A
PRO
257
A
PRO
230
HELX_P
A
GLU
260
A
GLU
233
5
13
4
A
SER
261
A
SER
234
HELX_P
A
GLN
266
A
GLN
239
1
14
6
A
GLY
270
A
GLY
243
HELX_P
A
ALA
277
A
ALA
250
1
15
8
A
SER
293
A
SER
266
HELX_P
A
ILE
301
A
ILE
274
1
16
9
A
ILE
301
A
ILE
274
HELX_P
A
GLU
306
A
GLU
279
1
17
6
disulf
2.051
A
CYS
45
A
SG
CYS
18
1_555
A
CYS
46
A
SG
CYS
19
1_555
disulf
2.041
A
CYS
96
A
SG
CYS
69
1_555
A
CYS
128
A
SG
CYS
101
1_555
disulf
2.040
A
CYS
152
A
SG
CYS
125
1_555
A
CYS
160
A
SG
CYS
133
1_555
covale
1.284
one
A
SER
115
A
OG
SER
88
1_555
A
PLM
430
E
C1
PLM
1_555
covale
1.451
one
N-Glycosylation
A
ASN
197
A
ND2
ASN
170
1_555
A
NAG
400
C
C1
NAG
1_555
covale
1.453
one
N-Glycosylation
A
ASN
212
A
ND2
ASN
185
1_555
A
NAG
410
D
C1
NAG
1_555
covale
1.452
one
N-Glycosylation
A
ASN
232
A
ND2
ASN
205
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.393
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
HYDROLASE
ALPHA/BETA HYDROLASE, GLYCOPROTEIN, HYDROLASE
A
SER
130
A
SER
103
1
A
PRO
131
A
PRO
104
-0.39
A
ASP
237
A
ASP
210
1
A
PRO
238
A
PRO
211
0.32
PPT_BOVIN
UNP
1
28
P45478
DPPAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEIGKTLREDVENSFFLNVNSQVTTVCQILAKDPKLQQ
GYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQHQGVFGLPRCPGESSHICDFIRKTLNAGAYNKAIQERLVQAEYWH
DPIREDIYRNHSIFLADINQERGVNESYKKNLMALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQD
RLGLKAMDKAGQLVFLALEGDHLQLSEEWFYAHIIPFLE
28
306
1EH5
28
306
P45478
A
1
1
279
6
2
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
VAL
67
A
VAL
40
A
SER
69
A
SER
42
A
LEU
35
A
LEU
8
A
TRP
38
A
TRP
11
A
TYR
109
A
TYR
82
A
PHE
114
A
PHE
87
A
MET
133
A
MET
106
A
VAL
139
A
VAL
112
A
LYS
224
A
LYS
197
A
PHE
230
A
PHE
203
A
LEU
280
A
LEU
253
A
LEU
285
A
LEU
258
A
PHE
246
A
PHE
219
A
TYR
247
A
TYR
220
A
THR
255
A
THR
228
A
ILE
256
A
ILE
229
91
P 41 2 2