0.015690 0.009059 0.000000 0.000000 0.018118 0.000000 0.000000 0.000000 0.015751 0.00000 0.00000 0.00000 Chatani, E. Hayashi, R. Moriyama, H. Ueki, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 63.733 63.733 63.490 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Protein Sci. PRCIEI 0795 0961-8368 11 72 81 10.1110/ps.ps.31102 11742124 Conformational strictness required for maximum activity and stability of bovine pancreatic ribonuclease A as revealed by crystallographic study of three Phe120 mutants at 1.4 A resolution. 2002 10.2210/pdb1eid/pdb pdb_00001eid 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1999-11-01 RIGAKU RAXIS IV SINGLE WAVELENGTH M x-ray 1 0.708459 1.0 BL40B2 SPring-8 0.708459 SYNCHROTRON SPRING-8 BEAMLINE BL40B2 13618.204 RIBONUCLEASE A 3.1.27.5 F120G 1 man polymer 18.015 water 142 nat water no no KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHGDASV KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHGDASV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos Escherichia sample 9913 PANCREAS Bos taurus 562 Escherichia coli PLASMID 1 2.73 54.99 VAPOR DIFFUSION, HANGING DROP 6.0 ammonium sulfate, sodium chloride, sodium acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 database_2 struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Database references 1 0 2002-02-13 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-11-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details 1DP1 is the same enzyme. This time we used synchrotron as radiation source. 1EIC and this structure are both Phe120 mutants of RNase A. Phe120Trp mutsnt of RNAse A RCSB Y RCSB 2000-02-25 REL REL HOH water TIP 1 2 HOH HOH 125 A TIP 2 2 HOH HOH 126 A TIP 3 2 HOH HOH 127 A TIP 4 2 HOH HOH 128 A TIP 5 2 HOH HOH 129 A TIP 6 2 HOH HOH 130 A TIP 7 2 HOH HOH 131 A TIP 8 2 HOH HOH 132 A TIP 9 2 HOH HOH 133 A TIP 10 2 HOH HOH 134 A TIP 11 2 HOH HOH 135 A TIP 12 2 HOH HOH 136 A TIP 13 2 HOH HOH 137 A TIP 14 2 HOH HOH 138 A TIP 16 2 HOH HOH 139 A TIP 17 2 HOH HOH 140 A TIP 18 2 HOH HOH 141 A TIP 19 2 HOH HOH 142 A TIP 20 2 HOH HOH 143 A TIP 22 2 HOH HOH 144 A TIP 23 2 HOH HOH 145 A TIP 24 2 HOH HOH 146 A TIP 25 2 HOH HOH 147 A TIP 26 2 HOH HOH 148 A TIP 27 2 HOH HOH 149 A TIP 28 2 HOH HOH 150 A TIP 29 2 HOH HOH 151 A TIP 30 2 HOH HOH 152 A TIP 31 2 HOH HOH 153 A TIP 32 2 HOH HOH 154 A TIP 33 2 HOH HOH 155 A TIP 34 2 HOH HOH 156 A TIP 35 2 HOH HOH 157 A TIP 36 2 HOH HOH 158 A TIP 37 2 HOH HOH 159 A TIP 38 2 HOH HOH 160 A TIP 39 2 HOH HOH 161 A TIP 40 2 HOH HOH 162 A TIP 41 2 HOH HOH 163 A TIP 42 2 HOH HOH 164 A TIP 43 2 HOH HOH 165 A TIP 44 2 HOH HOH 166 A TIP 45 2 HOH HOH 167 A TIP 46 2 HOH HOH 168 A TIP 47 2 HOH HOH 169 A TIP 48 2 HOH HOH 170 A TIP 49 2 HOH HOH 171 A TIP 50 2 HOH HOH 172 A TIP 51 2 HOH HOH 173 A TIP 52 2 HOH HOH 174 A TIP 53 2 HOH HOH 175 A TIP 54 2 HOH HOH 176 A TIP 55 2 HOH HOH 177 A TIP 56 2 HOH HOH 178 A TIP 57 2 HOH HOH 179 A TIP 58 2 HOH HOH 180 A TIP 59 2 HOH HOH 181 A TIP 60 2 HOH HOH 182 A TIP 61 2 HOH HOH 183 A TIP 62 2 HOH HOH 184 A TIP 63 2 HOH HOH 185 A TIP 64 2 HOH HOH 186 A TIP 65 2 HOH HOH 187 A TIP 66 2 HOH HOH 188 A TIP 67 2 HOH HOH 189 A TIP 68 2 HOH HOH 190 A TIP 69 2 HOH HOH 191 A TIP 70 2 HOH HOH 192 A TIP 71 2 HOH HOH 193 A TIP 72 2 HOH HOH 194 A TIP 73 2 HOH HOH 195 A TIP 74 2 HOH HOH 196 A TIP 75 2 HOH HOH 197 A TIP 76 2 HOH HOH 198 A TIP 77 2 HOH HOH 199 A TIP 78 2 HOH HOH 200 A TIP 79 2 HOH HOH 201 A TIP 80 2 HOH HOH 202 A TIP 81 2 HOH HOH 203 A TIP 82 2 HOH HOH 204 A TIP 83 2 HOH HOH 205 A TIP 84 2 HOH HOH 206 A TIP 85 2 HOH HOH 207 A TIP 86 2 HOH HOH 208 A TIP 87 2 HOH HOH 209 A TIP 88 2 HOH HOH 210 A TIP 89 2 HOH HOH 211 A TIP 90 2 HOH HOH 212 A TIP 91 2 HOH HOH 213 A TIP 92 2 HOH HOH 214 A TIP 93 2 HOH HOH 215 A TIP 94 2 HOH HOH 216 A TIP 95 2 HOH HOH 217 A TIP 96 2 HOH HOH 218 A TIP 97 2 HOH HOH 219 A TIP 98 2 HOH HOH 220 A TIP 99 2 HOH HOH 221 A TIP 100 2 HOH HOH 222 A TIP 101 2 HOH HOH 223 A TIP 102 2 HOH HOH 224 A TIP 103 2 HOH HOH 225 A TIP 104 2 HOH HOH 226 A TIP 105 2 HOH HOH 227 A TIP 106 2 HOH HOH 228 A TIP 107 2 HOH HOH 229 A TIP 108 2 HOH HOH 230 A TIP 109 2 HOH HOH 231 A TIP 110 2 HOH HOH 232 A TIP 111 2 HOH HOH 233 A TIP 112 2 HOH HOH 234 A TIP 113 2 HOH HOH 235 A TIP 114 2 HOH HOH 236 A TIP 115 2 HOH HOH 237 A TIP 116 2 HOH HOH 238 A TIP 117 2 HOH HOH 239 A TIP 118 2 HOH HOH 240 A TIP 119 2 HOH HOH 241 A TIP 120 2 HOH HOH 242 A TIP 121 2 HOH HOH 243 A TIP 122 2 HOH HOH 244 A TIP 123 2 HOH HOH 245 A TIP 124 2 HOH HOH 246 A TIP 125 2 HOH HOH 247 A TIP 126 2 HOH HOH 248 A TIP 127 2 HOH HOH 249 A TIP 128 2 HOH HOH 250 A TIP 129 2 HOH HOH 251 A TIP 130 2 HOH HOH 252 A TIP 131 2 HOH HOH 253 A TIP 132 2 HOH HOH 254 A TIP 133 2 HOH HOH 255 A TIP 134 2 HOH HOH 256 A TIP 135 2 HOH HOH 257 A TIP 136 2 HOH HOH 258 A TIP 137 2 HOH HOH 259 A TIP 138 2 HOH HOH 260 A TIP 139 2 HOH HOH 261 A TIP 140 2 HOH HOH 262 A TIP 141 2 HOH HOH 263 A TIP 142 2 HOH HOH 264 A TIP 143 2 HOH HOH 265 A TIP 144 2 HOH HOH 266 A LYS 1 n 1 LYS 1 A GLU 2 n 2 GLU 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A ARG 10 n 10 ARG 10 A GLN 11 n 11 GLN 11 A HIS 12 n 12 HIS 12 A MET 13 n 13 MET 13 A ASP 14 n 14 ASP 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A SER 18 n 18 SER 18 A ALA 19 n 19 ALA 19 A ALA 20 n 20 ALA 20 A SER 21 n 21 SER 21 A SER 22 n 22 SER 22 A SER 23 n 23 SER 23 A ASN 24 n 24 ASN 24 A TYR 25 n 25 TYR 25 A CYS 26 n 26 CYS 26 A ASN 27 n 27 ASN 27 A GLN 28 n 28 GLN 28 A MET 29 n 29 MET 29 A MET 30 n 30 MET 30 A LYS 31 n 31 LYS 31 A SER 32 n 32 SER 32 A ARG 33 n 33 ARG 33 A ASN 34 n 34 ASN 34 A LEU 35 n 35 LEU 35 A THR 36 n 36 THR 36 A LYS 37 n 37 LYS 37 A ASP 38 n 38 ASP 38 A ARG 39 n 39 ARG 39 A CYS 40 n 40 CYS 40 A LYS 41 n 41 LYS 41 A PRO 42 n 42 PRO 42 A VAL 43 n 43 VAL 43 A ASN 44 n 44 ASN 44 A THR 45 n 45 THR 45 A PHE 46 n 46 PHE 46 A VAL 47 n 47 VAL 47 A HIS 48 n 48 HIS 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A LEU 51 n 51 LEU 51 A ALA 52 n 52 ALA 52 A ASP 53 n 53 ASP 53 A VAL 54 n 54 VAL 54 A GLN 55 n 55 GLN 55 A ALA 56 n 56 ALA 56 A VAL 57 n 57 VAL 57 A CYS 58 n 58 CYS 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A LYS 61 n 61 LYS 61 A ASN 62 n 62 ASN 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A CYS 65 n 65 CYS 65 A LYS 66 n 66 LYS 66 A ASN 67 n 67 ASN 67 A GLY 68 n 68 GLY 68 A GLN 69 n 69 GLN 69 A THR 70 n 70 THR 70 A ASN 71 n 71 ASN 71 A CYS 72 n 72 CYS 72 A TYR 73 n 73 TYR 73 A GLN 74 n 74 GLN 74 A SER 75 n 75 SER 75 A TYR 76 n 76 TYR 76 A SER 77 n 77 SER 77 A THR 78 n 78 THR 78 A MET 79 n 79 MET 79 A SER 80 n 80 SER 80 A ILE 81 n 81 ILE 81 A THR 82 n 82 THR 82 A ASP 83 n 83 ASP 83 A CYS 84 n 84 CYS 84 A ARG 85 n 85 ARG 85 A GLU 86 n 86 GLU 86 A THR 87 n 87 THR 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A SER 90 n 90 SER 90 A LYS 91 n 91 LYS 91 A TYR 92 n 92 TYR 92 A PRO 93 n 93 PRO 93 A ASN 94 n 94 ASN 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A TYR 97 n 97 TYR 97 A LYS 98 n 98 LYS 98 A THR 99 n 99 THR 99 A THR 100 n 100 THR 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A ASN 103 n 103 ASN 103 A LYS 104 n 104 LYS 104 A HIS 105 n 105 HIS 105 A ILE 106 n 106 ILE 106 A ILE 107 n 107 ILE 107 A VAL 108 n 108 VAL 108 A ALA 109 n 109 ALA 109 A CYS 110 n 110 CYS 110 A GLU 111 n 111 GLU 111 A GLY 112 n 112 GLY 112 A ASN 113 n 113 ASN 113 A PRO 114 n 114 PRO 114 A TYR 115 n 115 TYR 115 A VAL 116 n 116 VAL 116 A PRO 117 n 117 PRO 117 A VAL 118 n 118 VAL 118 A HIS 119 n 119 HIS 119 A GLY 120 n 120 GLY 120 A ASP 121 n 121 ASP 121 A ALA 122 n 122 ALA 122 A SER 123 n 123 SER 123 A VAL 124 n 124 VAL 124 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 46 A O PHE 46 A N THR 82 A N THR 82 A O ARG 85 A O ARG 85 A N LYS 98 A N LYS 98 A N VAL 63 A N VAL 63 A O CYS 72 A O CYS 72 A N TYR 73 A N TYR 73 A O VAL 108 A O VAL 108 A N GLU 111 A N GLU 111 A O VAL 116 A O VAL 116 1 A GLN 60 -99.85 -136.13 1 A SER 89 -81.83 43.08 1 A ALA 122 -49.68 94.09 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 21.5 0.41 0.18 0.00 0.41 0.00 -0.83 0.265 0.005 0.21 1.40 5.99 2613 26197 26197 10.0 89.2 RANDOM 118515.49 0.00 1 RESTRAINED THROUGHOUT 2.0 0.20 0.18 6.00 0.02 0.13 1.40 5.99 142 1086 0 0 944 0.005 1.1 27.0 0.57 1.43 1.50 2.47 2.00 2.15 2.00 3.26 2.50 0.262 0.016 0.259 1.45 267 2309 10 10.4 88.1 14.2 1.20 41.655 1EID 47039 41727 2.0 0.043 1 12.6 5 88.8 0.307 1.20 1.24 4032 5 87.3 data reduction DENZO data scaling SCALEPACK model building X-PLOR refinement X-PLOR 3.851 phasing X-PLOR CRYSTAL STRUCTURE OF F120G MUTANT OF BOVINE PANCREATIC RIBONUCLEASE A 1 N N 2 N N The biological assembly is a monomer A THR 3 A THR 3 HELX_P A MET 13 A MET 13 1 1 11 A ASN 24 A ASN 24 HELX_P A ARG 33 A ARG 33 1 2 10 A SER 50 A SER 50 HELX_P A ALA 56 A ALA 56 1 3 7 A VAL 57 A VAL 57 HELX_P A GLN 60 A GLN 60 5 4 4 disulf 2.034 A CYS 26 A SG CYS 26 1_555 A CYS 84 A SG CYS 84 1_555 disulf 2.030 A CYS 40 A SG CYS 40 1_555 A CYS 95 A SG CYS 95 1_555 disulf 2.031 A CYS 58 A SG CYS 58 1_555 A CYS 110 A SG CYS 110 1_555 disulf 2.031 A CYS 65 A SG CYS 65 1_555 A CYS 72 A SG CYS 72 1_555 HYDROLASE ribonuclease, RNase A, Bovine pancreas, Hydrolase A TYR 92 A TYR 92 1 A PRO 93 A PRO 93 0.20 A ASN 113 A ASN 113 1 A PRO 114 A PRO 114 0.40 RNAS1_BOVIN UNP 1 27 P61823 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 27 150 1EID 1 124 P61823 A 1 1 124 1 PHE engineered mutation GLY 120 1EID A P61823 UNP 146 120 3 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 43 A VAL 43 A VAL 47 A VAL 47 A MET 79 A MET 79 A GLU 86 A GLU 86 A TYR 97 A TYR 97 A LYS 104 A LYS 104 A LYS 61 A LYS 61 A VAL 63 A VAL 63 A CYS 72 A CYS 72 A GLN 74 A GLN 74 A ILE 107 A ILE 107 A GLU 111 A GLU 111 A VAL 116 A VAL 116 A ASP 121 A ASP 121 154 P 32 2 1