0.016264 0.000000 0.006521 0.000000 0.018043 0.000000 0.000000 0.000000 0.014933 0.00000 0.00000 0.00000 Lai, L.H. Yokota, H. Hung, L.W. Kim, R. Kim, S.H. Berkeley Structural Genomics Center (BSGC) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 111.85 90.00 61.484 55.424 72.145 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H13 N O4 S 195.237 2-(N-MORPHOLINO)-ETHANESULFONIC ACID non-polymer C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 8 897 904 10.1016/S0969-2126(00)00179-9 10997908 Crystal structure of archaeal RNase HII: a homologue of human major RNase H 2000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 120 1 CCD MAD M x-ray 1 1.0 1.0 5.0.2 ALS 1.0 SYNCHROTRON ALS BEAMLINE 5.0.2 26693.609 RIBONUCLEASE HII 3.1.26.4 2 man polymer 195.237 2-(N-MORPHOLINO)-ETHANESULFONIC ACID 2 syn non-polymer 18.015 water 2-(N-MORPHOLINO)ETHANESULFONATE 313 nat water no yes (MSE)IIIGIDEAGRGPVLGP(MSE)VVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGYVEKRILEAEEI NQL(MSE)NSINLNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKA DAKYPVVSAASIIAKAERDEIIDYYKKIYGDIGSGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRILDKSKQTKLI IE MIIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGYVEKRILEAEEINQLMNSIN LNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASI IAKAERDEIIDYYKKIYGDIGSGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRILDKSKQTKLIIE A,B BSGCAIR30321 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Methanocaldococcus Escherichia sample 2190 Methanocaldococcus jannaschii 562 Escherichia coli 1 2.36 48 seeding 6.2 PEG 3350, potassium thiocyanate, magnesium chloride, pH 6.2, seeding, temperature 293K 293 Berkeley Structural Genomics Center BSGC PSI, Protein Structure Initiative repository Initial release Version format compliance Version format compliance 1 0 2000-09-13 1 1 2008-04-27 1 2 2011-07-13 Y RCSB Y RCSB 2000-03-07 REL REL MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HOH water MES 301 2 MES MES 301 A MES 302 2 MES MES 302 B HOH 403 3 HOH HOH 403 A HOH 405 3 HOH HOH 405 A HOH 406 3 HOH HOH 406 A HOH 410 3 HOH HOH 410 A HOH 411 3 HOH HOH 411 A HOH 420 3 HOH HOH 420 A HOH 422 3 HOH HOH 422 A HOH 424 3 HOH HOH 424 A HOH 425 3 HOH HOH 425 A HOH 429 3 HOH HOH 429 A HOH 430 3 HOH HOH 430 A HOH 432 3 HOH HOH 432 A HOH 434 3 HOH HOH 434 A HOH 441 3 HOH HOH 441 A HOH 445 3 HOH HOH 445 A HOH 446 3 HOH HOH 446 A HOH 447 3 HOH HOH 447 A HOH 449 3 HOH HOH 449 A HOH 453 3 HOH HOH 453 A HOH 454 3 HOH HOH 454 A HOH 458 3 HOH HOH 458 A HOH 459 3 HOH HOH 459 A HOH 461 3 HOH HOH 461 A HOH 462 3 HOH HOH 462 A HOH 465 3 HOH HOH 465 A HOH 468 3 HOH HOH 468 A HOH 475 3 HOH HOH 475 A HOH 478 3 HOH HOH 478 A HOH 479 3 HOH HOH 479 A HOH 481 3 HOH HOH 481 A HOH 483 3 HOH HOH 483 A HOH 485 3 HOH HOH 485 A HOH 492 3 HOH HOH 492 A HOH 494 3 HOH HOH 494 A HOH 497 3 HOH HOH 497 A HOH 501 3 HOH HOH 501 A HOH 502 3 HOH HOH 502 A HOH 503 3 HOH HOH 503 A HOH 512 3 HOH HOH 512 A HOH 515 3 HOH HOH 515 A HOH 519 3 HOH HOH 519 A HOH 521 3 HOH HOH 521 A HOH 522 3 HOH HOH 522 A HOH 523 3 HOH HOH 523 A HOH 524 3 HOH HOH 524 A HOH 525 3 HOH HOH 525 A HOH 526 3 HOH HOH 526 A HOH 527 3 HOH HOH 527 A HOH 528 3 HOH HOH 528 A HOH 531 3 HOH HOH 531 A HOH 532 3 HOH HOH 532 A HOH 535 3 HOH HOH 535 A HOH 536 3 HOH HOH 536 A HOH 538 3 HOH HOH 538 A HOH 539 3 HOH HOH 539 A HOH 541 3 HOH HOH 541 A HOH 542 3 HOH HOH 542 A HOH 543 3 HOH HOH 543 A HOH 544 3 HOH HOH 544 A HOH 549 3 HOH HOH 549 A HOH 554 3 HOH HOH 554 A HOH 558 3 HOH HOH 558 A HOH 564 3 HOH HOH 564 A HOH 566 3 HOH HOH 566 A HOH 567 3 HOH HOH 567 A HOH 573 3 HOH HOH 573 A HOH 574 3 HOH HOH 574 A HOH 575 3 HOH HOH 575 A HOH 578 3 HOH HOH 578 A HOH 582 3 HOH HOH 582 A HOH 589 3 HOH HOH 589 A HOH 591 3 HOH HOH 591 A HOH 592 3 HOH HOH 592 A HOH 593 3 HOH HOH 593 A HOH 594 3 HOH HOH 594 A HOH 598 3 HOH HOH 598 A HOH 602 3 HOH HOH 602 A HOH 603 3 HOH HOH 603 A HOH 605 3 HOH HOH 605 A HOH 607 3 HOH HOH 607 A HOH 610 3 HOH HOH 610 A HOH 611 3 HOH HOH 611 A HOH 612 3 HOH HOH 612 A HOH 614 3 HOH HOH 614 A HOH 617 3 HOH HOH 617 A HOH 618 3 HOH HOH 618 A HOH 620 3 HOH HOH 620 A HOH 622 3 HOH HOH 622 A HOH 628 3 HOH HOH 628 A HOH 631 3 HOH HOH 631 A HOH 632 3 HOH HOH 632 A HOH 633 3 HOH HOH 633 A HOH 635 3 HOH HOH 635 A HOH 637 3 HOH HOH 637 A HOH 642 3 HOH HOH 642 A HOH 643 3 HOH HOH 643 A HOH 646 3 HOH HOH 646 A HOH 648 3 HOH HOH 648 A HOH 653 3 HOH HOH 653 A HOH 654 3 HOH HOH 654 A HOH 655 3 HOH HOH 655 A HOH 657 3 HOH HOH 657 A HOH 660 3 HOH HOH 660 A HOH 665 3 HOH HOH 665 A HOH 667 3 HOH HOH 667 A HOH 669 3 HOH HOH 669 A HOH 671 3 HOH HOH 671 A HOH 672 3 HOH HOH 672 A HOH 673 3 HOH HOH 673 A HOH 674 3 HOH HOH 674 A HOH 678 3 HOH HOH 678 A HOH 684 3 HOH HOH 684 A HOH 685 3 HOH HOH 685 A HOH 686 3 HOH HOH 686 A HOH 688 3 HOH HOH 688 A HOH 690 3 HOH HOH 690 A HOH 692 3 HOH HOH 692 A HOH 694 3 HOH HOH 694 A HOH 695 3 HOH HOH 695 A HOH 699 3 HOH HOH 699 A HOH 701 3 HOH HOH 701 A HOH 702 3 HOH HOH 702 A HOH 704 3 HOH HOH 704 A HOH 707 3 HOH HOH 707 A HOH 708 3 HOH HOH 708 A HOH 713 3 HOH HOH 713 A HOH 401 3 HOH HOH 401 B HOH 402 3 HOH HOH 402 B HOH 404 3 HOH HOH 404 B HOH 407 3 HOH HOH 407 B HOH 408 3 HOH HOH 408 B HOH 409 3 HOH HOH 409 B HOH 412 3 HOH HOH 412 B HOH 413 3 HOH HOH 413 B HOH 414 3 HOH HOH 414 B HOH 415 3 HOH HOH 415 B HOH 416 3 HOH HOH 416 B HOH 417 3 HOH HOH 417 B HOH 418 3 HOH HOH 418 B HOH 419 3 HOH HOH 419 B HOH 421 3 HOH HOH 421 B HOH 423 3 HOH HOH 423 B HOH 426 3 HOH HOH 426 B HOH 427 3 HOH HOH 427 B HOH 428 3 HOH HOH 428 B HOH 431 3 HOH HOH 431 B HOH 433 3 HOH HOH 433 B HOH 435 3 HOH HOH 435 B HOH 436 3 HOH HOH 436 B HOH 437 3 HOH HOH 437 B HOH 438 3 HOH HOH 438 B HOH 439 3 HOH HOH 439 B HOH 440 3 HOH HOH 440 B HOH 442 3 HOH HOH 442 B HOH 443 3 HOH HOH 443 B HOH 444 3 HOH HOH 444 B HOH 448 3 HOH HOH 448 B HOH 450 3 HOH HOH 450 B HOH 451 3 HOH HOH 451 B HOH 452 3 HOH HOH 452 B HOH 455 3 HOH HOH 455 B HOH 456 3 HOH HOH 456 B HOH 457 3 HOH HOH 457 B HOH 460 3 HOH HOH 460 B HOH 463 3 HOH HOH 463 B HOH 464 3 HOH HOH 464 B HOH 466 3 HOH HOH 466 B HOH 467 3 HOH HOH 467 B HOH 469 3 HOH HOH 469 B HOH 470 3 HOH HOH 470 B HOH 471 3 HOH HOH 471 B HOH 472 3 HOH HOH 472 B HOH 473 3 HOH HOH 473 B HOH 474 3 HOH HOH 474 B HOH 476 3 HOH HOH 476 B HOH 477 3 HOH HOH 477 B HOH 480 3 HOH HOH 480 B HOH 482 3 HOH HOH 482 B HOH 484 3 HOH HOH 484 B HOH 486 3 HOH HOH 486 B HOH 487 3 HOH HOH 487 B HOH 488 3 HOH HOH 488 B HOH 489 3 HOH HOH 489 B HOH 490 3 HOH HOH 490 B HOH 491 3 HOH HOH 491 B HOH 493 3 HOH HOH 493 B HOH 495 3 HOH HOH 495 B HOH 496 3 HOH HOH 496 B HOH 498 3 HOH HOH 498 B HOH 499 3 HOH HOH 499 B HOH 500 3 HOH HOH 500 B HOH 504 3 HOH HOH 504 B HOH 505 3 HOH HOH 505 B HOH 506 3 HOH HOH 506 B HOH 507 3 HOH HOH 507 B HOH 508 3 HOH HOH 508 B HOH 509 3 HOH HOH 509 B HOH 510 3 HOH HOH 510 B HOH 511 3 HOH HOH 511 B HOH 513 3 HOH HOH 513 B HOH 514 3 HOH HOH 514 B HOH 516 3 HOH HOH 516 B HOH 517 3 HOH HOH 517 B HOH 518 3 HOH HOH 518 B HOH 520 3 HOH HOH 520 B HOH 529 3 HOH HOH 529 B HOH 530 3 HOH HOH 530 B HOH 533 3 HOH HOH 533 B HOH 534 3 HOH HOH 534 B HOH 537 3 HOH HOH 537 B HOH 540 3 HOH HOH 540 B HOH 545 3 HOH HOH 545 B HOH 546 3 HOH HOH 546 B HOH 547 3 HOH HOH 547 B HOH 548 3 HOH HOH 548 B HOH 550 3 HOH HOH 550 B HOH 551 3 HOH HOH 551 B HOH 552 3 HOH HOH 552 B HOH 553 3 HOH HOH 553 B HOH 555 3 HOH HOH 555 B HOH 556 3 HOH HOH 556 B HOH 557 3 HOH HOH 557 B HOH 559 3 HOH HOH 559 B HOH 560 3 HOH HOH 560 B HOH 561 3 HOH HOH 561 B HOH 562 3 HOH HOH 562 B HOH 563 3 HOH HOH 563 B HOH 565 3 HOH HOH 565 B HOH 568 3 HOH HOH 568 B HOH 569 3 HOH HOH 569 B HOH 570 3 HOH HOH 570 B HOH 571 3 HOH HOH 571 B HOH 572 3 HOH HOH 572 B HOH 576 3 HOH HOH 576 B HOH 577 3 HOH HOH 577 B HOH 579 3 HOH HOH 579 B HOH 580 3 HOH HOH 580 B HOH 581 3 HOH HOH 581 B HOH 583 3 HOH HOH 583 B HOH 584 3 HOH HOH 584 B HOH 585 3 HOH HOH 585 B HOH 586 3 HOH HOH 586 B HOH 587 3 HOH HOH 587 B HOH 588 3 HOH HOH 588 B HOH 590 3 HOH HOH 590 B HOH 595 3 HOH HOH 595 B HOH 596 3 HOH HOH 596 B HOH 597 3 HOH HOH 597 B HOH 599 3 HOH HOH 599 B HOH 600 3 HOH HOH 600 B HOH 601 3 HOH HOH 601 B HOH 604 3 HOH HOH 604 B HOH 606 3 HOH HOH 606 B HOH 608 3 HOH HOH 608 B HOH 609 3 HOH HOH 609 B HOH 613 3 HOH HOH 613 B HOH 615 3 HOH HOH 615 B HOH 616 3 HOH HOH 616 B HOH 619 3 HOH HOH 619 B HOH 621 3 HOH HOH 621 B HOH 623 3 HOH HOH 623 B HOH 624 3 HOH HOH 624 B HOH 625 3 HOH HOH 625 B HOH 626 3 HOH HOH 626 B HOH 627 3 HOH HOH 627 B HOH 629 3 HOH HOH 629 B HOH 630 3 HOH HOH 630 B HOH 634 3 HOH HOH 634 B HOH 636 3 HOH HOH 636 B HOH 638 3 HOH HOH 638 B HOH 639 3 HOH HOH 639 B HOH 640 3 HOH HOH 640 B HOH 641 3 HOH HOH 641 B HOH 644 3 HOH HOH 644 B HOH 645 3 HOH HOH 645 B HOH 647 3 HOH HOH 647 B HOH 649 3 HOH HOH 649 B HOH 650 3 HOH HOH 650 B HOH 651 3 HOH HOH 651 B HOH 652 3 HOH HOH 652 B HOH 656 3 HOH HOH 656 B HOH 658 3 HOH HOH 658 B HOH 659 3 HOH HOH 659 B HOH 661 3 HOH HOH 661 B HOH 662 3 HOH HOH 662 B HOH 663 3 HOH HOH 663 B HOH 664 3 HOH HOH 664 B HOH 666 3 HOH HOH 666 B HOH 668 3 HOH HOH 668 B HOH 670 3 HOH HOH 670 B HOH 675 3 HOH HOH 675 B HOH 676 3 HOH HOH 676 B HOH 677 3 HOH HOH 677 B HOH 679 3 HOH HOH 679 B HOH 680 3 HOH HOH 680 B HOH 681 3 HOH HOH 681 B HOH 682 3 HOH HOH 682 B HOH 683 3 HOH HOH 683 B HOH 687 3 HOH HOH 687 B HOH 689 3 HOH HOH 689 B HOH 691 3 HOH HOH 691 B HOH 693 3 HOH HOH 693 B HOH 696 3 HOH HOH 696 B HOH 697 3 HOH HOH 697 B HOH 698 3 HOH HOH 698 B HOH 700 3 HOH HOH 700 B HOH 703 3 HOH HOH 703 B HOH 705 3 HOH HOH 705 B HOH 706 3 HOH HOH 706 B HOH 709 3 HOH HOH 709 B HOH 710 3 HOH HOH 710 B HOH 711 3 HOH HOH 711 B HOH 712 3 HOH HOH 712 B MSE 1 n 1 MSE 1 A ILE 2 n 2 ILE 2 A ILE 3 n 3 ILE 3 A ILE 4 n 4 ILE 4 A GLY 5 n 5 GLY 5 A ILE 6 n 6 ILE 6 A ASP 7 n 7 ASP 7 A GLU 8 n 8 GLU 8 A ALA 9 n 9 ALA 9 A GLY 10 n 10 GLY 10 A ARG 11 n 11 ARG 11 A GLY 12 n 12 GLY 12 A PRO 13 n 13 PRO 13 A VAL 14 n 14 VAL 14 A LEU 15 n 15 LEU 15 A GLY 16 n 16 GLY 16 A PRO 17 n 17 PRO 17 A MSE 18 n 18 MSE 18 A VAL 19 n 19 VAL 19 A VAL 20 n 20 VAL 20 A CYS 21 n 21 CYS 21 A ALA 22 n 22 ALA 22 A PHE 23 n 23 PHE 23 A ALA 24 n 24 ALA 24 A ILE 25 n 25 ILE 25 A GLU 26 n 26 GLU 26 A LYS 27 n 27 LYS 27 A GLU 28 n 28 GLU 28 A ARG 29 n 29 ARG 29 A GLU 30 n 30 GLU 30 A GLU 31 n 31 GLU 31 A GLU 32 n 32 GLU 32 A LEU 33 n 33 LEU 33 A LYS 34 n 34 LYS 34 A LYS 35 n 35 LYS 35 A LEU 36 n 36 LEU 36 A GLY 37 n 37 GLY 37 A VAL 38 n 38 VAL 38 A LYS 39 n 39 LYS 39 A n 40 40 A n 41 41 A n 42 42 A GLU 43 n 43 GLU 43 A LEU 44 n 44 LEU 44 A THR 45 n 45 THR 45 A LYS 46 n 46 LYS 46 A ASN 47 n 47 ASN 47 A LYS 48 n 48 LYS 48 A ARG 49 n 49 ARG 49 A ALA 50 n 50 ALA 50 A TYR 51 n 51 TYR 51 A LEU 52 n 52 LEU 52 A LYS 53 n 53 LYS 53 A LYS 54 n 54 LYS 54 A LEU 55 n 55 LEU 55 A LEU 56 n 56 LEU 56 A GLU 57 n 57 GLU 57 A ASN 58 n 58 ASN 58 A LEU 59 n 59 LEU 59 A GLY 60 n 60 GLY 60 A TYR 61 n 61 TYR 61 A VAL 62 n 62 VAL 62 A GLU 63 n 63 GLU 63 A LYS 64 n 64 LYS 64 A ARG 65 n 65 ARG 65 A ILE 66 n 66 ILE 66 A LEU 67 n 67 LEU 67 A GLU 68 n 68 GLU 68 A ALA 69 n 69 ALA 69 A GLU 70 n 70 GLU 70 A GLU 71 n 71 GLU 71 A ILE 72 n 72 ILE 72 A ASN 73 n 73 ASN 73 A GLN 74 n 74 GLN 74 A LEU 75 n 75 LEU 75 A MSE 76 n 76 MSE 76 A ASN 77 n 77 ASN 77 A SER 78 n 78 SER 78 A ILE 79 n 79 ILE 79 A ASN 80 n 80 ASN 80 A LEU 81 n 81 LEU 81 A ASN 82 n 82 ASN 82 A ASP 83 n 83 ASP 83 A ILE 84 n 84 ILE 84 A GLU 85 n 85 GLU 85 A ILE 86 n 86 ILE 86 A ASN 87 n 87 ASN 87 A ALA 88 n 88 ALA 88 A PHE 89 n 89 PHE 89 A SER 90 n 90 SER 90 A LYS 91 n 91 LYS 91 A VAL 92 n 92 VAL 92 A ALA 93 n 93 ALA 93 A LYS 94 n 94 LYS 94 A ASN 95 n 95 ASN 95 A LEU 96 n 96 LEU 96 A ILE 97 n 97 ILE 97 A GLU 98 n 98 GLU 98 A LYS 99 n 99 LYS 99 A LEU 100 n 100 LEU 100 A ASN 101 n 101 ASN 101 A ILE 102 n 102 ILE 102 A ARG 103 n 103 ARG 103 A ASP 104 n 104 ASP 104 A ASP 105 n 105 ASP 105 A GLU 106 n 106 GLU 106 A ILE 107 n 107 ILE 107 A GLU 108 n 108 GLU 108 A ILE 109 n 109 ILE 109 A TYR 110 n 110 TYR 110 A ILE 111 n 111 ILE 111 A ASP 112 n 112 ASP 112 A ALA 113 n 113 ALA 113 A CYS 114 n 114 CYS 114 A SER 115 n 115 SER 115 A THR 116 n 116 THR 116 A ASN 117 n 117 ASN 117 A THR 118 n 118 THR 118 A LYS 119 n 119 LYS 119 A LYS 120 n 120 LYS 120 A PHE 121 n 121 PHE 121 A GLU 122 n 122 GLU 122 A ASP 123 n 123 ASP 123 A SER 124 n 124 SER 124 A PHE 125 n 125 PHE 125 A LYS 126 n 126 LYS 126 A ASP 127 n 127 ASP 127 A LYS 128 n 128 LYS 128 A ILE 129 n 129 ILE 129 A GLU 130 n 130 GLU 130 A ASP 131 n 131 ASP 131 A ILE 132 n 132 ILE 132 A ILE 133 n 133 ILE 133 A LYS 134 n 134 LYS 134 A GLU 135 n 135 GLU 135 A ARG 136 n 136 ARG 136 A ASN 137 n 137 ASN 137 A LEU 138 n 138 LEU 138 A ASN 139 n 139 ASN 139 A ILE 140 n 140 ILE 140 A LYS 141 n 141 LYS 141 A ILE 142 n 142 ILE 142 A ILE 143 n 143 ILE 143 A ALA 144 n 144 ALA 144 A GLU 145 n 145 GLU 145 A HIS 146 n 146 HIS 146 A LYS 147 n 147 LYS 147 A ALA 148 n 148 ALA 148 A ASP 149 n 149 ASP 149 A ALA 150 n 150 ALA 150 A LYS 151 n 151 LYS 151 A TYR 152 n 152 TYR 152 A PRO 153 n 153 PRO 153 A VAL 154 n 154 VAL 154 A VAL 155 n 155 VAL 155 A SER 156 n 156 SER 156 A ALA 157 n 157 ALA 157 A ALA 158 n 158 ALA 158 A SER 159 n 159 SER 159 A ILE 160 n 160 ILE 160 A ILE 161 n 161 ILE 161 A ALA 162 n 162 ALA 162 A LYS 163 n 163 LYS 163 A ALA 164 n 164 ALA 164 A GLU 165 n 165 GLU 165 A ARG 166 n 166 ARG 166 A ASP 167 n 167 ASP 167 A GLU 168 n 168 GLU 168 A ILE 169 n 169 ILE 169 A ILE 170 n 170 ILE 170 A ASP 171 n 171 ASP 171 A TYR 172 n 172 TYR 172 A TYR 173 n 173 TYR 173 A LYS 174 n 174 LYS 174 A LYS 175 n 175 LYS 175 A ILE 176 n 176 ILE 176 A TYR 177 n 177 TYR 177 A GLY 178 n 178 GLY 178 A ASP 179 n 179 ASP 179 A ILE 180 n 180 ILE 180 A GLY 181 n 181 GLY 181 A SER 182 n 182 SER 182 A GLY 183 n 183 GLY 183 A TYR 184 n 184 TYR 184 A PRO 185 n 185 PRO 185 A SER 186 n 186 SER 186 A ASP 187 n 187 ASP 187 A PRO 188 n 188 PRO 188 A LYS 189 n 189 LYS 189 A THR 190 n 190 THR 190 A ILE 191 n 191 ILE 191 A LYS 192 n 192 LYS 192 A PHE 193 n 193 PHE 193 A LEU 194 n 194 LEU 194 A GLU 195 n 195 GLU 195 A ASP 196 n 196 ASP 196 A TYR 197 n 197 TYR 197 A PHE 198 n 198 PHE 198 A LYS 199 n 199 LYS 199 A LYS 200 n 200 LYS 200 A HIS 201 n 201 HIS 201 A LYS 202 n 202 LYS 202 A LYS 203 n 203 LYS 203 A LEU 204 n 204 LEU 204 A PRO 205 n 205 PRO 205 A ASP 206 n 206 ASP 206 A ILE 207 n 207 ILE 207 A ALA 208 n 208 ALA 208 A ARG 209 n 209 ARG 209 A THR 210 n 210 THR 210 A HIS 211 n 211 HIS 211 A TRP 212 n 212 TRP 212 A LYS 213 n 213 LYS 213 A THR 214 n 214 THR 214 A CYS 215 n 215 CYS 215 A LYS 216 n 216 LYS 216 A ARG 217 n 217 ARG 217 A ILE 218 n 218 ILE 218 A LEU 219 n 219 LEU 219 A ASP 220 n 220 ASP 220 A LYS 221 n 221 LYS 221 A SER 222 n 222 SER 222 A LYS 223 n 223 LYS 223 A GLN 224 n 224 GLN 224 A THR 225 n 225 THR 225 A n 226 226 A n 227 227 A n 228 228 A n 229 229 A n 230 230 A MSE 1 n 1 MSE 1 B ILE 2 n 2 ILE 2 B ILE 3 n 3 ILE 3 B ILE 4 n 4 ILE 4 B GLY 5 n 5 GLY 5 B ILE 6 n 6 ILE 6 B ASP 7 n 7 ASP 7 B GLU 8 n 8 GLU 8 B ALA 9 n 9 ALA 9 B GLY 10 n 10 GLY 10 B ARG 11 n 11 ARG 11 B GLY 12 n 12 GLY 12 B PRO 13 n 13 PRO 13 B VAL 14 n 14 VAL 14 B LEU 15 n 15 LEU 15 B GLY 16 n 16 GLY 16 B PRO 17 n 17 PRO 17 B MSE 18 n 18 MSE 18 B VAL 19 n 19 VAL 19 B VAL 20 n 20 VAL 20 B CYS 21 n 21 CYS 21 B ALA 22 n 22 ALA 22 B PHE 23 n 23 PHE 23 B ALA 24 n 24 ALA 24 B ILE 25 n 25 ILE 25 B GLU 26 n 26 GLU 26 B LYS 27 n 27 LYS 27 B GLU 28 n 28 GLU 28 B ARG 29 n 29 ARG 29 B GLU 30 n 30 GLU 30 B GLU 31 n 31 GLU 31 B GLU 32 n 32 GLU 32 B LEU 33 n 33 LEU 33 B LYS 34 n 34 LYS 34 B LYS 35 n 35 LYS 35 B LEU 36 n 36 LEU 36 B GLY 37 n 37 GLY 37 B VAL 38 n 38 VAL 38 B LYS 39 n 39 LYS 39 B ASP 40 n 40 ASP 40 B SER 41 n 41 SER 41 B LYS 42 n 42 LYS 42 B GLU 43 n 43 GLU 43 B LEU 44 n 44 LEU 44 B THR 45 n 45 THR 45 B LYS 46 n 46 LYS 46 B ASN 47 n 47 ASN 47 B LYS 48 n 48 LYS 48 B ARG 49 n 49 ARG 49 B ALA 50 n 50 ALA 50 B TYR 51 n 51 TYR 51 B LEU 52 n 52 LEU 52 B LYS 53 n 53 LYS 53 B LYS 54 n 54 LYS 54 B LEU 55 n 55 LEU 55 B LEU 56 n 56 LEU 56 B GLU 57 n 57 GLU 57 B ASN 58 n 58 ASN 58 B LEU 59 n 59 LEU 59 B GLY 60 n 60 GLY 60 B TYR 61 n 61 TYR 61 B VAL 62 n 62 VAL 62 B GLU 63 n 63 GLU 63 B LYS 64 n 64 LYS 64 B ARG 65 n 65 ARG 65 B ILE 66 n 66 ILE 66 B LEU 67 n 67 LEU 67 B GLU 68 n 68 GLU 68 B ALA 69 n 69 ALA 69 B GLU 70 n 70 GLU 70 B GLU 71 n 71 GLU 71 B ILE 72 n 72 ILE 72 B ASN 73 n 73 ASN 73 B GLN 74 n 74 GLN 74 B LEU 75 n 75 LEU 75 B MSE 76 n 76 MSE 76 B ASN 77 n 77 ASN 77 B SER 78 n 78 SER 78 B ILE 79 n 79 ILE 79 B ASN 80 n 80 ASN 80 B LEU 81 n 81 LEU 81 B ASN 82 n 82 ASN 82 B ASP 83 n 83 ASP 83 B ILE 84 n 84 ILE 84 B GLU 85 n 85 GLU 85 B ILE 86 n 86 ILE 86 B ASN 87 n 87 ASN 87 B ALA 88 n 88 ALA 88 B PHE 89 n 89 PHE 89 B SER 90 n 90 SER 90 B LYS 91 n 91 LYS 91 B VAL 92 n 92 VAL 92 B ALA 93 n 93 ALA 93 B LYS 94 n 94 LYS 94 B ASN 95 n 95 ASN 95 B LEU 96 n 96 LEU 96 B ILE 97 n 97 ILE 97 B GLU 98 n 98 GLU 98 B LYS 99 n 99 LYS 99 B LEU 100 n 100 LEU 100 B ASN 101 n 101 ASN 101 B ILE 102 n 102 ILE 102 B ARG 103 n 103 ARG 103 B ASP 104 n 104 ASP 104 B ASP 105 n 105 ASP 105 B GLU 106 n 106 GLU 106 B ILE 107 n 107 ILE 107 B GLU 108 n 108 GLU 108 B ILE 109 n 109 ILE 109 B TYR 110 n 110 TYR 110 B ILE 111 n 111 ILE 111 B ASP 112 n 112 ASP 112 B ALA 113 n 113 ALA 113 B CYS 114 n 114 CYS 114 B SER 115 n 115 SER 115 B THR 116 n 116 THR 116 B ASN 117 n 117 ASN 117 B THR 118 n 118 THR 118 B LYS 119 n 119 LYS 119 B LYS 120 n 120 LYS 120 B PHE 121 n 121 PHE 121 B GLU 122 n 122 GLU 122 B ASP 123 n 123 ASP 123 B SER 124 n 124 SER 124 B PHE 125 n 125 PHE 125 B LYS 126 n 126 LYS 126 B ASP 127 n 127 ASP 127 B LYS 128 n 128 LYS 128 B ILE 129 n 129 ILE 129 B GLU 130 n 130 GLU 130 B ASP 131 n 131 ASP 131 B ILE 132 n 132 ILE 132 B ILE 133 n 133 ILE 133 B LYS 134 n 134 LYS 134 B GLU 135 n 135 GLU 135 B ARG 136 n 136 ARG 136 B ASN 137 n 137 ASN 137 B LEU 138 n 138 LEU 138 B ASN 139 n 139 ASN 139 B ILE 140 n 140 ILE 140 B LYS 141 n 141 LYS 141 B ILE 142 n 142 ILE 142 B ILE 143 n 143 ILE 143 B ALA 144 n 144 ALA 144 B GLU 145 n 145 GLU 145 B HIS 146 n 146 HIS 146 B LYS 147 n 147 LYS 147 B ALA 148 n 148 ALA 148 B ASP 149 n 149 ASP 149 B ALA 150 n 150 ALA 150 B LYS 151 n 151 LYS 151 B TYR 152 n 152 TYR 152 B PRO 153 n 153 PRO 153 B VAL 154 n 154 VAL 154 B VAL 155 n 155 VAL 155 B SER 156 n 156 SER 156 B ALA 157 n 157 ALA 157 B ALA 158 n 158 ALA 158 B SER 159 n 159 SER 159 B ILE 160 n 160 ILE 160 B ILE 161 n 161 ILE 161 B ALA 162 n 162 ALA 162 B LYS 163 n 163 LYS 163 B ALA 164 n 164 ALA 164 B GLU 165 n 165 GLU 165 B ARG 166 n 166 ARG 166 B ASP 167 n 167 ASP 167 B GLU 168 n 168 GLU 168 B ILE 169 n 169 ILE 169 B ILE 170 n 170 ILE 170 B ASP 171 n 171 ASP 171 B TYR 172 n 172 TYR 172 B TYR 173 n 173 TYR 173 B LYS 174 n 174 LYS 174 B LYS 175 n 175 LYS 175 B ILE 176 n 176 ILE 176 B TYR 177 n 177 TYR 177 B GLY 178 n 178 GLY 178 B ASP 179 n 179 ASP 179 B ILE 180 n 180 ILE 180 B GLY 181 n 181 GLY 181 B SER 182 n 182 SER 182 B GLY 183 n 183 GLY 183 B TYR 184 n 184 TYR 184 B PRO 185 n 185 PRO 185 B SER 186 n 186 SER 186 B ASP 187 n 187 ASP 187 B PRO 188 n 188 PRO 188 B LYS 189 n 189 LYS 189 B THR 190 n 190 THR 190 B ILE 191 n 191 ILE 191 B LYS 192 n 192 LYS 192 B PHE 193 n 193 PHE 193 B LEU 194 n 194 LEU 194 B GLU 195 n 195 GLU 195 B ASP 196 n 196 ASP 196 B TYR 197 n 197 TYR 197 B PHE 198 n 198 PHE 198 B LYS 199 n 199 LYS 199 B LYS 200 n 200 LYS 200 B HIS 201 n 201 HIS 201 B LYS 202 n 202 LYS 202 B LYS 203 n 203 LYS 203 B LEU 204 n 204 LEU 204 B PRO 205 n 205 PRO 205 B ASP 206 n 206 ASP 206 B ILE 207 n 207 ILE 207 B ALA 208 n 208 ALA 208 B ARG 209 n 209 ARG 209 B THR 210 n 210 THR 210 B HIS 211 n 211 HIS 211 B TRP 212 n 212 TRP 212 B LYS 213 n 213 LYS 213 B THR 214 n 214 THR 214 B CYS 215 n 215 CYS 215 B LYS 216 n 216 LYS 216 B ARG 217 n 217 ARG 217 B ILE 218 n 218 ILE 218 B LEU 219 n 219 LEU 219 B ASP 220 n 220 ASP 220 B LYS 221 n 221 LYS 221 B SER 222 n 222 SER 222 B LYS 223 n 223 LYS 223 B GLN 224 n 224 GLN 224 B THR 225 n 225 THR 225 B n 226 226 B n 227 227 B n 228 228 B n 229 229 B n 230 230 B author_defined_assembly 2 dimeric A MSE 1 SELENOMETHIONINE A MSE 1 MET A MSE 18 SELENOMETHIONINE A MSE 18 MET A MSE 76 SELENOMETHIONINE A MSE 76 MET B MSE 1 SELENOMETHIONINE B MSE 1 MET B MSE 18 SELENOMETHIONINE B MSE 18 MET B MSE 76 SELENOMETHIONINE B MSE 76 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 67 A N LEU 67 A O MSE 18 A O MSE 18 A O ILE 25 A O ILE 25 A N ILE 3 A N ILE 3 A N ILE 2 A N ILE 2 A O GLU 106 A O GLU 106 A N ILE 107 A N ILE 107 A O ASN 139 A O ASN 139 B N LEU 67 B N LEU 67 B O MSE 18 B O MSE 18 B O ILE 25 B O ILE 25 B N ILE 3 B N ILE 3 B N ILE 2 B N ILE 2 B O GLU 106 B O GLU 106 B O ASP 105 B O ASP 105 B N ASN 139 B N ASN 139 1 A CG GLU 43 A CG GLU 43 1 Y 1 A CD GLU 43 A CD GLU 43 1 Y 1 A OE1 GLU 43 A OE1 GLU 43 1 Y 1 A OE2 GLU 43 A OE2 GLU 43 1 Y 1 A CG LYS 189 A CG LYS 189 1 Y 1 A CD LYS 189 A CD LYS 189 1 Y 1 A CE LYS 189 A CE LYS 189 1 Y 1 A NZ LYS 189 A NZ LYS 189 1 Y 1 A CG LYS 223 A CG LYS 223 1 Y 1 A CD LYS 223 A CD LYS 223 1 Y 1 A CE LYS 223 A CE LYS 223 1 Y 1 A NZ LYS 223 A NZ LYS 223 1 Y 1 A CG GLN 224 A CG GLN 224 1 Y 1 A CD GLN 224 A CD GLN 224 1 Y 1 A OE1 GLN 224 A OE1 GLN 224 1 Y 1 A NE2 GLN 224 A NE2 GLN 224 1 Y 1 A OG1 THR 225 A OG1 THR 225 1 Y 1 A CG2 THR 225 A CG2 THR 225 1 Y 1 B CG LYS 39 B CG LYS 39 1 Y 1 B CD LYS 39 B CD LYS 39 1 Y 1 B CE LYS 39 B CE LYS 39 1 Y 1 B NZ LYS 39 B NZ LYS 39 1 Y 1 B CG ASP 40 B CG ASP 40 1 Y 1 B OD1 ASP 40 B OD1 ASP 40 1 Y 1 B OD2 ASP 40 B OD2 ASP 40 1 Y 1 B OG SER 41 B OG SER 41 1 Y 1 B CG LYS 42 B CG LYS 42 1 Y 1 B CD LYS 42 B CD LYS 42 1 Y 1 B CE LYS 42 B CE LYS 42 1 Y 1 B NZ LYS 42 B NZ LYS 42 1 Y 1 B CG GLU 43 B CG GLU 43 1 Y 1 B CD GLU 43 B CD GLU 43 1 Y 1 B OE1 GLU 43 B OE1 GLU 43 1 Y 1 B OE2 GLU 43 B OE2 GLU 43 1 Y 1 A ASP 40 A ASP 40 1 Y 1 A SER 41 A SER 41 1 Y 1 A LYS 42 A LYS 42 1 Y 1 A LYS 226 A LYS 226 1 Y 1 A LEU 227 A LEU 227 1 Y 1 A ILE 228 A ILE 228 1 Y 1 A ILE 229 A ILE 229 1 Y 1 A GLU 230 A GLU 230 1 Y 1 B LYS 226 B LYS 226 1 Y 1 B LEU 227 B LEU 227 1 Y 1 B ILE 228 B ILE 228 1 Y 1 B ILE 229 B ILE 229 1 Y 1 B GLU 230 B GLU 230 1 Y 1 A SER 78 -137.98 -32.56 1 A LYS 174 -56.46 -3.15 1 A ASP 179 -58.34 106.04 1 A ASP 187 -58.62 106.34 1 B LYS 39 -74.32 38.98 1 B ASP 179 -69.33 96.65 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM 33.7 7.96 0.00 -2.83 -4.74 0.00 -3.22 Used Maximum likelihood target 0.262 0.007 0.21 0.21256 0.21 2.00 20.00 1467 30523 29715 4.9 97.4 RANDOM 346794.70 10000 0.00 1 RESTRAINED THROUGHOUT 0.0 0.0 MAD PHASING cns FLAT MODEL 45.92 0.325 0.32 0.24 5.00 0.23 0.17 2.00 20.00 341 3950 24 0 3585 0.008 1.3 21.1 0.72 0.306 0.021 0.25 2.13 218 4186 6 5.0 86.3 14.1 2.0 20.0 1EKE 30523 29715 0.0 0.0 0.059 1 18.3 5.8 97.4 0.225 2.00 2.03 1410 5.1 94.6 data reduction DENZO data scaling SCALEPACK phasing SOLVE refinement CNS 0.5 RIBONUCLEASE HII (E.C.3.1.26.4) CRYSTAL STRUCTURE OF CLASS II RIBONUCLEASE H (RNASE HII) WITH MES LIGAND 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A ARG 29 A ARG 29 HELX_P A LYS 35 A LYS 35 1 1 7 A THR 45 A THR 45 HELX_P A GLY 60 A GLY 60 1 2 16 A GLU 68 A GLU 68 HELX_P A MSE 76 A MSE 76 1 3 9 A ASN 80 A ASN 80 HELX_P A LEU 100 A LEU 100 1 4 21 A ASN 117 A ASN 117 HELX_P A LYS 134 A LYS 134 1 5 18 A LYS 147 A LYS 147 HELX_P A LYS 151 A LYS 151 5 6 5 A TYR 152 A TYR 152 HELX_P A TYR 177 A TYR 177 1 7 26 A ASP 187 A ASP 187 HELX_P A LYS 202 A LYS 202 1 8 16 A TRP 212 A TRP 212 HELX_P A SER 222 A SER 222 1 9 11 B ARG 29 B ARG 29 HELX_P B LEU 36 B LEU 36 1 10 8 B THR 45 B THR 45 HELX_P B GLY 60 B GLY 60 1 11 16 B GLU 68 B GLU 68 HELX_P B MSE 76 B MSE 76 1 12 9 B ASN 80 B ASN 80 HELX_P B LEU 100 B LEU 100 1 13 21 B ASN 117 B ASN 117 HELX_P B ARG 136 B ARG 136 1 14 20 B LYS 147 B LYS 147 HELX_P B LYS 151 B LYS 151 5 15 5 B TYR 152 B TYR 152 HELX_P B GLY 178 B GLY 178 1 16 27 B ASP 187 B ASP 187 HELX_P B LYS 202 B LYS 202 1 17 16 B TRP 212 B TRP 212 HELX_P B LYS 223 B LYS 223 1 18 12 covale 1.330 A MSE 1 A C MSE 1 1_555 A ILE 2 A N ILE 2 1_555 covale 1.332 A PRO 17 A C PRO 17 1_555 A MSE 18 A N MSE 18 1_555 covale 1.324 A MSE 18 A C MSE 18 1_555 A VAL 19 A N VAL 19 1_555 covale 1.328 A LEU 75 A C LEU 75 1_555 A MSE 76 A N MSE 76 1_555 covale 1.327 A MSE 76 A C MSE 76 1_555 A ASN 77 A N ASN 77 1_555 covale 1.327 B MSE 1 B C MSE 1 1_555 B ILE 2 B N ILE 2 1_555 covale 1.324 B PRO 17 B C PRO 17 1_555 B MSE 18 B N MSE 18 1_555 covale 1.331 B MSE 18 B C MSE 18 1_555 B VAL 19 B N VAL 19 1_555 covale 1.328 B LEU 75 B C LEU 75 1_555 B MSE 76 B N MSE 76 1_555 covale 1.330 B MSE 76 B C MSE 76 1_555 B ASN 77 B N ASN 77 1_555 HYDROLASE Nuclease, Endonuclease, Structural Genomics, BSGC structure funded by NIH, Protein Structure Initiative, PSI, Berkeley Structural Genomics Center, HYDROLASE RNH2_METJA UNP 1 1 Q57599 MIIIGIDEAGRGPVLGPMVVCAFAIEKEREEELKKLGVKDSKELTKNKRAYLKKLLENLGYVEKRILEAEEINQLMNSIN LNDIEINAFSKVAKNLIEKLNIRDDEIEIYIDACSTNTKKFEDSFKDKIEDIIKERNLNIKIIAEHKADAKYPVVSAASI IAKAERDEIIDYYKKIYGDIGSGYPSDPKTIKFLEDYFKKHKKLPDIARTHWKTCKRILDKSKQTKLIIE 1 230 1EKE 1 230 Q57599 A 1 1 230 1 230 1EKE 1 230 Q57599 B 1 1 230 1 MET MODIFIED RESIDUE MSE 1 1EKE A Q57599 UNP 1 1 1 MET MODIFIED RESIDUE MSE 18 1EKE A Q57599 UNP 18 18 1 MET MODIFIED RESIDUE MSE 76 1EKE A Q57599 UNP 76 76 2 MET MODIFIED RESIDUE MSE 1 1EKE B Q57599 UNP 1 1 2 MET MODIFIED RESIDUE MSE 18 1EKE B Q57599 UNP 18 18 2 MET MODIFIED RESIDUE MSE 76 1EKE B Q57599 UNP 76 76 5 5 anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel parallel parallel A TYR 61 A TYR 61 A LEU 67 A LEU 67 A MSE 18 A MSE 18 A GLU 26 A GLU 26 A ILE 2 A ILE 2 A ALA 9 A ALA 9 A GLU 106 A GLU 106 A ASP 112 A ASP 112 A ASN 139 A ASN 139 A GLU 145 A GLU 145 B TYR 61 B TYR 61 B LEU 67 B LEU 67 B MSE 18 B MSE 18 B GLU 26 B GLU 26 B ILE 2 B ILE 2 B ALA 9 B ALA 9 B ASP 105 B ASP 105 B ASP 112 B ASP 112 B LEU 138 B LEU 138 B GLU 145 B GLU 145 BINDING SITE FOR RESIDUE MES A 301 Software 4 BINDING SITE FOR RESIDUE MES B 302 Software 3 A TRP 212 A TRP 212 4 1_555 A LYS 213 A LYS 213 4 1_555 A HOH 403 E HOH 4 1_555 A HOH 422 E HOH 4 1_555 B TRP 212 B TRP 212 3 1_555 B LYS 213 B LYS 213 3 1_555 B HOH 680 F HOH 3 1_555 4 P 1 21 1