0.031496 0.000000 0.015965 0.000000 0.038873 0.000000 0.000000 0.000000 0.032889 0.000000 0.000000 0.000000 Chiu, T.K. Dickerson, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 116.88 90.00 31.750 25.725 34.088 Ca 2 40.078 CALCIUM ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C2 H6 O 46.068 ETHANOL non-polymer H2 O 18.015 WATER non-polymer N 1 N CA N 2 N O N 3 N P N 4 N O N 5 N O N 6 N O N 7 N C N 8 R C N 9 N O N 10 S C N 11 N O N 12 N C N 13 R C Y 14 N N Y 15 N C Y 16 N N Y 17 N C Y 18 N C N 19 N N Y 20 N N Y 21 N C Y 22 N N Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N O N 39 N P N 40 N O N 41 N O N 42 N O N 43 N C N 44 R C N 45 N O N 46 S C N 47 N O N 48 N C N 49 R C N 50 N N N 51 N C N 52 N O N 53 N N N 54 N C N 55 N N N 56 N C N 57 N C N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N O N 73 N P N 74 N O N 75 N O N 76 N O N 77 N C N 78 R C N 79 N O N 80 S C N 81 N O N 82 N C N 83 R C Y 84 N N Y 85 N C Y 86 N N Y 87 N C N 88 N C N 89 N O N 90 N N N 91 N C N 92 N N N 93 N N Y 94 N C N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N O N 110 N P N 111 N O N 112 N O N 113 N O N 114 N C N 115 R C N 116 N O N 117 S C N 118 N O N 119 N C N 120 R C N 121 N N N 122 N C N 123 N O N 124 N N N 125 N C N 126 N O N 127 N C N 128 N C N 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N C N 146 N C N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N O N 155 N H N 156 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 301 915 945 10.1006/jmbi.2000.4012 10966796 1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium. 2000 UK J.Mol.Biol. JMOBAK 0070 0022-2836 292 589 608 10.1006/jmbi.1999.3075 Absence of minor groove monovalent cations in the crosslinked dodecamer CGCGAATTCGCG 1999 10.2210/pdb1ene/pdb pdb_00001ene 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 AREA DETECTOR 1998-11-19 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.9500 1.0 X8C NSLS 0.9500 SYNCHROTRON NSLS BEAMLINE X8C 3045.992 DNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3') 1 syn polymer 40.078 CALCIUM ION 5 syn non-polymer 46.068 ETHANOL 3 syn non-polymer 18.015 water 89 nat water no no (DC)(DC)(DA)(DG)(DC)(DG)(DC)(DT)(DG)(DG) CCAGCGCTGG A polydeoxyribonucleotide n n n n n n n n n n 1 2.06 36.80 VAPOR DIFFUSION, SITTING DROP initial concentrations in droplet: 0.17 mM dna, 61.20 mM calcium acetate, 10-15% MPD, 30% final MPD concentration in reservoir. Solutions were unbuffered, VAPOR DIFFUSION, SITTING DROP, temperature 275.0K 275.0 calcium acetate 1 streptonigrin 1 MPD 1 MPD 2 -6.207 1 19 A 1 A 10 -0.157 A_DC1:DG10_A 1 -14.176 0.105 0.056 -0.141 -0.504 1 19 A 2 A 9 -0.933 A_DC2:DG9_A 2 -11.690 0.312 0.085 -0.162 -1.186 1 20 A 3 A 8 0.541 A_DA3:DT8_A 3 -4.100 0.034 0.076 -0.125 10.655 1 19 A 4 A 7 0.764 A_DG4:DC7_A 4 -6.195 -0.141 0.249 -0.074 14.547 1 19 A 5 A 6 -0.019 A_DC5:DG6_A 5 -14.635 0.247 -0.084 -0.123 -14.547 1 19 A 6 A 5 -0.019 A_DG6:DC5_A 6 -14.635 -0.247 -0.084 -0.123 -10.655 1 19 A 7 A 4 0.764 A_DC7:DG4_A 7 -6.195 0.141 0.249 -0.074 1.186 1 20 A 8 A 3 0.541 A_DT8:DA3_A 8 -4.100 -0.034 0.076 -0.125 0.504 1 19 A 9 A 2 -0.933 A_DG9:DC2_A 9 -11.690 -0.312 0.085 -0.162 6.206 1 19 A 10 A 1 -0.157 A_DG10:DC1_A 10 -14.176 -0.105 0.056 -0.141 3.263 30.164 A A 1 2 16.539 A A 10 9 3.268 8.478 -0.545 0.732 AA_DC1DC2:DG9DG10_AA 1 3.398 -6.630 28.778 -0.360 1.754 2.835 51.094 A A 2 3 -8.559 A A 9 8 3.253 -7.359 0.137 2.854 AA_DC2DA3:DT8DG9_AA 2 -1.177 1.369 50.583 3.787 -0.236 3.021 22.583 A A 3 4 24.210 A A 8 7 3.083 9.182 0.715 0.800 AA_DA3DG4:DC7DT8_AA 3 -3.012 7.941 20.435 -1.247 -2.905 3.149 38.798 A A 4 5 -5.375 A A 7 6 3.249 -3.564 -0.501 0.598 AA_DG4DC5:DG6DC7_AA 4 2.333 -3.519 38.572 1.326 1.034 3.615 45.135 A A 5 6 13.430 A A 6 5 3.769 10.227 0.000 -0.305 AA_DC5DG6:DC5DG6_AA 5 0.000 0.000 44.020 -1.445 0.000 3.149 38.798 A A 6 7 -5.375 A A 5 4 3.249 -3.564 0.501 0.598 AA_DG6DC7:DG4DC5_AA 6 -2.333 3.519 38.572 1.326 -1.034 3.021 22.583 A A 7 8 24.210 A A 4 3 3.083 9.182 -0.715 0.800 AA_DC7DT8:DA3DG4_AA 7 3.012 -7.941 20.435 -1.247 2.905 2.835 51.094 A A 8 9 -8.559 A A 3 2 3.253 -7.359 -0.137 2.854 AA_DT8DG9:DC2DA3_AA 8 1.177 -1.369 50.583 3.787 0.236 3.263 30.164 A A 9 10 16.539 A A 2 1 3.268 8.478 0.545 0.732 AA_DG9DG10:DC1DC2_AA 9 -3.398 6.630 28.778 -0.360 -1.754 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2000-09-25 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 1 4 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id NDB Y NDB 2000-03-21 REL REL CA CALCIUM ION EOH ETHANOL HOH water 5DNB BDJ019 PDB experimental model 543 111 2 CA CA 111 A OC7 112 2 CA CA 112 A OC5 113 2 CA CA 113 A OC6 1113 2 CA CA 1113 A OC3 114 2 CA CA 114 A 543 111 3 EOH EOH 1114 A EOH 227 3 EOH EOH 227 A EOH 244 3 EOH EOH 244 A HOH 201 4 HOH HOH 201 A HOH 202 4 HOH HOH 202 A HOH 203 4 HOH HOH 203 A HOH 204 4 HOH HOH 204 A HOH 205 4 HOH HOH 205 A HOH 206 4 HOH HOH 206 A HOH 207 4 HOH HOH 207 A HOH 208 4 HOH HOH 208 A HOH 209 4 HOH HOH 209 A HOH 210 4 HOH HOH 210 A HOH 211 4 HOH HOH 211 A HOH 212 4 HOH HOH 212 A HOH 214 4 HOH HOH 214 A HOH 215 4 HOH HOH 215 A HOH 216 4 HOH HOH 216 A HOH 217 4 HOH HOH 217 A HOH 218 4 HOH HOH 218 A HOH 219 4 HOH HOH 219 A HOH 221 4 HOH HOH 221 A HOH 222 4 HOH HOH 222 A HOH 224 4 HOH HOH 224 A HOH 225 4 HOH HOH 225 A HOH 226 4 HOH HOH 226 A HOH 228 4 HOH HOH 228 A HOH 229 4 HOH HOH 229 A HOH 230 4 HOH HOH 230 A HOH 231 4 HOH HOH 231 A HOH 233 4 HOH HOH 233 A HOH 234 4 HOH HOH 234 A HOH 235 4 HOH HOH 235 A HOH 236 4 HOH HOH 236 A HOH 237 4 HOH HOH 237 A HOH 238 4 HOH HOH 238 A HOH 240 4 HOH HOH 240 A HOH 241 4 HOH HOH 241 A HOH 243 4 HOH HOH 243 A HOH 248 4 HOH HOH 248 A HOH 249 4 HOH HOH 249 A HOH 250 4 HOH HOH 250 A HOH 252 4 HOH HOH 252 A HOH 253 4 HOH HOH 253 A HOH 256 4 HOH HOH 256 A HOH 259 4 HOH HOH 259 A HOH 260 4 HOH HOH 260 A HOH 262 4 HOH HOH 262 A HOH 265 4 HOH HOH 265 A HOH 267 4 HOH HOH 267 A HOH 287 4 HOH HOH 287 A HOH 1229 4 HOH HOH 1229 A HOH 1244 4 HOH HOH 1244 A HOH 1249 4 HOH HOH 1249 A HOH 1251 4 HOH HOH 1251 A HOH 1258 4 HOH HOH 1258 A HOH 1276 4 HOH HOH 1276 A HOH 1280 4 HOH HOH 1280 A HOH 1283 4 HOH HOH 1283 A HOH 1301 4 HOH HOH 1301 A HOH 1320 4 HOH HOH 1320 A HOH 1342 4 HOH HOH 1342 A HOH 1343 4 HOH HOH 1343 A HOH 1356 4 HOH HOH 1356 A HOH 1358 4 HOH HOH 1358 A 543 111 4 HOH HOH 1359 A 543 111 4 HOH HOH 1360 A 543 111 4 HOH HOH 1361 A 543 111 4 HOH HOH 1362 A 543 111 4 HOH HOH 1363 A 543 111 4 HOH HOH 1364 A OC7 112 4 HOH HOH 1365 A OC7 112 4 HOH HOH 1366 A OC7 112 4 HOH HOH 1367 A OC7 112 4 HOH HOH 1368 A OC7 112 4 HOH HOH 1369 A OC7 112 4 HOH HOH 1370 A OC7 112 4 HOH HOH 1371 A OC5 113 4 HOH HOH 1372 A OC5 113 4 HOH HOH 1373 A OC5 113 4 HOH HOH 1374 A OC5 113 4 HOH HOH 1375 A OC5 113 4 HOH HOH 1376 A OC6 1113 4 HOH HOH 1377 A OC6 1113 4 HOH HOH 1378 A OC6 1113 4 HOH HOH 1379 A OC6 1113 4 HOH HOH 1380 A OC6 1113 4 HOH HOH 1381 A OC6 1113 4 HOH HOH 1382 A OC3 114 4 HOH HOH 1383 A OC3 114 4 HOH HOH 1384 A OC3 114 4 HOH HOH 1385 A C 1 n 1 DC 1 A C 2 n 2 DC 2 A A 3 n 3 DA 3 A G 4 n 4 DG 4 A C 5 n 5 DC 5 A G 6 n 6 DG 6 A C 7 n 7 DC 7 A T 8 n 8 DT 8 A G 9 n 9 DG 9 A G 10 n 10 DG 10 A 0.1200000 0.1470000 654 5 13004 author_defined_assembly 2 dimeric A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A DG 10 A O6 DG 10 2_656 78.0 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1372 C J O HOH 1_555 81.2 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1372 C J O HOH 1_555 90.7 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 1_555 140.0 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 1_555 62.1 A HOH 1372 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 1_555 95.4 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 2_655 122.5 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 2_655 58.0 A HOH 1372 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 2_655 129.4 A HOH 1373 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1373 C J O HOH 2_655 36.5 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1374 C J O HOH 1_555 143.9 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1374 C J O HOH 1_555 134.3 A HOH 1372 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1374 C J O HOH 1_555 82.6 A HOH 1373 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1374 C J O HOH 1_555 73.6 A HOH 1373 C J O HOH 2_655 A CA 113 C D CA CA 1_555 A HOH 1374 C J O HOH 1_555 92.6 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 90.6 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 82.8 A HOH 1372 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 170.5 A HOH 1373 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 87.8 A HOH 1373 C J O HOH 2_655 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 51.9 A HOH 1374 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1375 C J O HOH 1_555 106.9 A DG 9 A N7 DG 9 2_656 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 73.9 A DG 10 A O6 DG 10 2_656 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 149.7 A HOH 1372 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 96.2 A HOH 1373 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 145.7 A HOH 1373 C J O HOH 2_655 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 131.5 A HOH 1374 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 76.0 A HOH 1375 C J O HOH 1_555 A CA 113 C D CA CA 1_555 A HOH 1376 C J O HOH 1_555 86.1 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1359 C J O HOH 1_555 113.9 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1360 C J O HOH 1_555 93.3 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1360 C J O HOH 1_555 130.2 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1360 C J O HOH 2_655 82.9 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1360 C J O HOH 2_655 51.5 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1360 C J O HOH 2_655 95.3 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1361 C J O HOH 1_555 82.0 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1361 C J O HOH 1_555 145.9 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1361 C J O HOH 1_555 75.0 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1361 C J O HOH 1_555 161.5 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1362 C J O HOH 1_555 77.7 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1362 C J O HOH 1_555 77.2 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1362 C J O HOH 1_555 151.8 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1362 C J O HOH 1_555 109.7 A HOH 1361 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1362 C J O HOH 1_555 77.3 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 72.9 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 74.2 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 75.4 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 23.1 A HOH 1361 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 139.7 A HOH 1362 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 1_555 125.3 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 94.5 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 97.7 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 36.5 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 59.4 A HOH 1361 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 111.4 A HOH 1362 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 167.7 A HOH 1363 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1363 C J O HOH 2_655 42.6 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 151.2 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 79.4 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 96.6 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 122.8 A HOH 1361 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 74.6 A HOH 1362 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 80.9 A HOH 1363 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 135.9 A HOH 1363 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 1_555 109.4 A EOH 1114 C G O EOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 105.0 A HOH 1359 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 24.3 A HOH 1360 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 153.9 A HOH 1360 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 69.2 A HOH 1361 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 125.3 A HOH 1362 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 52.9 A HOH 1363 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 92.0 A HOH 1363 C J O HOH 2_655 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 121.7 A HOH 1364 C J O HOH 1_555 A CA 111 C B CA CA 1_555 A HOH 1364 C J O HOH 2_655 76.3 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1366 C J O HOH 1_555 129.5 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1367 C J O HOH 1_555 149.9 A HOH 1366 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1367 C J O HOH 1_555 78.9 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1368 C J O HOH 1_555 72.7 A HOH 1366 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1368 C J O HOH 1_555 74.0 A HOH 1367 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1368 C J O HOH 1_555 132.5 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1369 C J O HOH 1_555 85.1 A HOH 1366 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1369 C J O HOH 1_555 83.3 A HOH 1367 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1369 C J O HOH 1_555 89.6 A HOH 1368 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1369 C J O HOH 1_555 124.1 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1370 C J O HOH 1_555 71.6 A HOH 1366 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1370 C J O HOH 1_555 152.7 A HOH 1367 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1370 C J O HOH 1_555 78.4 A HOH 1368 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1370 C J O HOH 1_555 133.2 A HOH 1369 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1370 C J O HOH 1_555 81.6 A HOH 1365 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 103.0 A HOH 1366 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 101.6 A HOH 1367 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 76.1 A HOH 1368 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 72.3 A HOH 1369 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 163.5 A HOH 1370 C J O HOH 1_555 A CA 112 C C CA CA 1_555 A HOH 1371 C J O HOH 1_555 87.4 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1366 D J O HOH 1_555 100.8 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1367 D J O HOH 1_555 75.9 A HOH 1366 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1367 D J O HOH 1_555 77.7 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1368 D J O HOH 1_555 74.6 A HOH 1366 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1368 D J O HOH 1_555 155.4 A HOH 1367 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1368 D J O HOH 1_555 77.8 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1369 D J O HOH 1_555 154.6 A HOH 1366 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1369 D J O HOH 1_555 84.6 A HOH 1367 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1369 D J O HOH 1_555 81.2 A HOH 1368 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1369 D J O HOH 1_555 90.2 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1370 D J O HOH 1_555 115.0 A HOH 1366 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1370 D J O HOH 1_555 129.2 A HOH 1367 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1370 D J O HOH 1_555 143.4 A HOH 1368 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1370 D J O HOH 1_555 72.6 A HOH 1369 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1370 D J O HOH 1_555 78.1 A HOH 1365 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 80.6 A HOH 1366 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 80.7 A HOH 1367 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 144.2 A HOH 1368 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 121.3 A HOH 1369 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 124.8 A HOH 1370 D J O HOH 1_555 A CA 112 D C CA CA 1_555 A HOH 1371 D J O HOH 1_555 71.5 A HOH 1383 B J O HOH 1_555 A CA 114 B F CA CA 1_555 A HOH 1384 B J O HOH 1_555 138.3 A HOH 1383 B J O HOH 1_555 A CA 114 B F CA CA 1_555 A HOH 1385 B J O HOH 1_555 88.0 A HOH 1384 B J O HOH 1_555 A CA 114 B F CA CA 1_555 A HOH 1385 B J O HOH 1_555 97.5 A HOH 1377 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1378 D J O HOH 1_555 80.8 A HOH 1377 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1379 D J O HOH 1_555 96.9 A HOH 1378 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1379 D J O HOH 1_555 82.5 A HOH 1377 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1380 D J O HOH 1_555 82.3 A HOH 1378 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1380 D J O HOH 1_555 154.6 A HOH 1379 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1380 D J O HOH 1_555 80.8 A HOH 1377 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1381 D J O HOH 1_555 148.2 A HOH 1378 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1381 D J O HOH 1_555 100.2 A HOH 1379 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1381 D J O HOH 1_555 52.4 A HOH 1380 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1381 D J O HOH 1_555 84.4 A HOH 1377 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1382 D J O HOH 1_555 67.0 A HOH 1378 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1382 D J O HOH 1_555 140.7 A HOH 1379 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1382 D J O HOH 1_555 122.1 A HOH 1380 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1382 D J O HOH 1_555 43.4 A HOH 1381 D J O HOH 1_555 A CA 1113 D E CA CA 1_555 A HOH 1382 D J O HOH 1_555 119.0 A HOH 1377 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1378 E J O HOH 1_555 120.5 A HOH 1377 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1379 E J O HOH 1_555 69.6 A HOH 1378 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1379 E J O HOH 1_555 145.0 A HOH 1377 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1380 E J O HOH 1_555 74.2 A HOH 1378 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1380 E J O HOH 1_555 73.3 A HOH 1379 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1380 E J O HOH 1_555 137.9 A HOH 1377 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1381 E J O HOH 1_555 79.1 A HOH 1378 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1381 E J O HOH 1_555 148.0 A HOH 1379 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1381 E J O HOH 1_555 62.6 A HOH 1380 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1381 E J O HOH 1_555 90.4 A HOH 1377 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1382 E J O HOH 1_555 158.5 A HOH 1378 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1382 E J O HOH 1_555 73.4 A HOH 1379 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1382 E J O HOH 1_555 109.4 A HOH 1380 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1382 E J O HOH 1_555 96.6 A HOH 1381 E J O HOH 1_555 A CA 1113 E E CA CA 1_555 A HOH 1382 E J O HOH 1_555 81.6 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_656 -x+1,y,-z+1 crystal symmetry operation 16.3380180286 0.0000000000 30.4049758380 1 A HOH 218 J HOH 1 A DA 3 0.069 SIDE CHAIN 1 A DG 6 A 0.085 SIDE CHAIN 1 A DC 7 A 0.078 SIDE CHAIN 1 A DG 9 0.070 SIDE CHAIN 1 -16.39 2.50 109.70 93.31 A A A C4' C3' O3' DC DC DC 1 1 1 A A N 1 2.47 0.40 105.80 108.27 A A A C8 N9 C4 DA DA DA 3 3 3 N 1 -6.20 1.00 110.10 103.90 A A A C1' O4' C4' DG DG DG 4 4 4 N 1 17.82 1.20 119.70 137.52 A A A C3' O3' P DC DC DG 5 5 6 A A A Y 1 11.67 1.10 109.80 121.47 A A A C5' C4' O4' DG DG DG 6 6 6 A A N 1 3.17 0.50 128.60 131.77 A A A N3 C4 C5 DG DG DG 6 6 6 N 1 -3.80 0.60 118.80 115.00 A A A C4 C5 C6 DG DG DG 6 6 6 N 1 A A O3' P DC DC 1 2 -0.077 0.012 1.607 1.530 A A Y REFINEMENT STARTED IN X-PLOR 3.843 WITH IDEAL B-DNA FITTED ONTO BDJ019. AFTER ALL DATA HAS BEEN ADDED AND REFINED BY SIMULATED ANNEALING IN X-PLOR 3.843, REFINEMENT CONTINUED BY CONJUGATE GRADIENT LEAST-SQUARES IN SHELXL-97. THE TOP 50 MOST DISAGREEABLE REFLECTIONS WERE REJECTED TOWARDS THE LATTER STAGES OF REFINEMENT BUT THESE ARE STILL INCLUDED IN THE RELEASED DATA. 0.1477000 0.1214000 0.1214000 0.985 8.0 16552 665 13423 13423 4814 5 95.5 random 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT BDJ019 Parkinson et al. SHELX swat option 13 113 276.5 0.985 8.0 76 477 50 351 0 0.018 0.048 0.286 0.006 0.026 0.035 4.41 0.985 8.0 1ENE 13423 13423 -1.0 0.0320000 1 30.7 4.65 95.5 0.0900000 0.985 1.016 9.1 1279 91.5 model building X-PLOR refinement SHELXL-97 data reduction DENZO data scaling SCALEPACK phasing X-PLOR 1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM. 1 N N 2 N N 2 N N 2 N N 2 N N 2 N N 3 N N 3 N N 3 N N 4 N N metalc 2.712 C A DG 9 A N7 DG 9 2_656 A CA 113 D CA CA 1_555 metalc 2.638 C A DG 10 A O6 DG 10 2_656 A CA 113 D CA CA 1_555 metalc 2.447 C C A CA 111 B CA CA 1_555 A EOH 1114 G O EOH 1_555 metalc 2.413 C C A CA 111 B CA CA 1_555 A HOH 1359 J O HOH 1_555 metalc 2.382 C C A CA 111 B CA CA 1_555 A HOH 1360 J O HOH 1_555 metalc 3.387 C C A CA 111 B CA CA 1_555 A HOH 1360 J O HOH 2_655 metalc 2.446 C C A CA 111 B CA CA 1_555 A HOH 1361 J O HOH 1_555 metalc 2.434 C C A CA 111 B CA CA 1_555 A HOH 1362 J O HOH 1_555 metalc 2.479 C C A CA 111 B CA CA 1_555 A HOH 1363 J O HOH 1_555 metalc 2.312 C C A CA 111 B CA CA 1_555 A HOH 1363 J O HOH 2_655 metalc 2.397 C C A CA 111 B CA CA 1_555 A HOH 1364 J O HOH 1_555 metalc 2.853 C C A CA 111 B CA CA 1_555 A HOH 1364 J O HOH 2_655 metalc 2.458 C C A CA 112 C CA CA 1_555 A HOH 1365 J O HOH 1_555 metalc 2.457 D D A CA 112 C CA CA 1_555 A HOH 1365 J O HOH 1_555 metalc 2.422 C C A CA 112 C CA CA 1_555 A HOH 1366 J O HOH 1_555 metalc 2.417 D D A CA 112 C CA CA 1_555 A HOH 1366 J O HOH 1_555 metalc 2.444 C C A CA 112 C CA CA 1_555 A HOH 1367 J O HOH 1_555 metalc 2.439 D D A CA 112 C CA CA 1_555 A HOH 1367 J O HOH 1_555 metalc 2.465 C C A CA 112 C CA CA 1_555 A HOH 1368 J O HOH 1_555 metalc 2.437 D D A CA 112 C CA CA 1_555 A HOH 1368 J O HOH 1_555 metalc 2.440 C C A CA 112 C CA CA 1_555 A HOH 1369 J O HOH 1_555 metalc 2.417 D D A CA 112 C CA CA 1_555 A HOH 1369 J O HOH 1_555 metalc 2.436 C C A CA 112 C CA CA 1_555 A HOH 1370 J O HOH 1_555 metalc 2.410 D D A CA 112 C CA CA 1_555 A HOH 1370 J O HOH 1_555 metalc 2.428 C C A CA 112 C CA CA 1_555 A HOH 1371 J O HOH 1_555 metalc 2.439 D D A CA 112 C CA CA 1_555 A HOH 1371 J O HOH 1_555 metalc 2.464 C C A CA 113 D CA CA 1_555 A HOH 1372 J O HOH 1_555 metalc 2.415 C C A CA 113 D CA CA 1_555 A HOH 1373 J O HOH 1_555 metalc 3.197 C C A CA 113 D CA CA 1_555 A HOH 1373 J O HOH 2_655 metalc 2.442 C C A CA 113 D CA CA 1_555 A HOH 1374 J O HOH 1_555 metalc 2.464 C C A CA 113 D CA CA 1_555 A HOH 1375 J O HOH 1_555 metalc 2.427 C C A CA 113 D CA CA 1_555 A HOH 1376 J O HOH 1_555 metalc 2.406 B B A CA 114 F CA CA 1_555 A HOH 1383 J O HOH 1_555 metalc 2.437 B B A CA 114 F CA CA 1_555 A HOH 1384 J O HOH 1_555 metalc 2.424 B B A CA 114 F CA CA 1_555 A HOH 1385 J O HOH 1_555 metalc 2.446 D D A CA 1113 E CA CA 1_555 A HOH 1377 J O HOH 1_555 metalc 2.437 E E A CA 1113 E CA CA 1_555 A HOH 1377 J O HOH 1_555 metalc 2.462 D D A CA 1113 E CA CA 1_555 A HOH 1378 J O HOH 1_555 metalc 2.442 E E A CA 1113 E CA CA 1_555 A HOH 1378 J O HOH 1_555 metalc 2.481 D D A CA 1113 E CA CA 1_555 A HOH 1379 J O HOH 1_555 metalc 2.448 E E A CA 1113 E CA CA 1_555 A HOH 1379 J O HOH 1_555 metalc 2.463 D D A CA 1113 E CA CA 1_555 A HOH 1380 J O HOH 1_555 metalc 2.444 E E A CA 1113 E CA CA 1_555 A HOH 1380 J O HOH 1_555 metalc 2.475 D D A CA 1113 E CA CA 1_555 A HOH 1381 J O HOH 1_555 metalc 2.453 E E A CA 1113 E CA CA 1_555 A HOH 1381 J O HOH 1_555 metalc 2.468 D D A CA 1113 E CA CA 1_555 A HOH 1382 J O HOH 1_555 metalc 2.440 E E A CA 1113 E CA CA 1_555 A HOH 1382 J O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 A DG 10 A N1 DG 10 2_656 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 A DG 10 A O6 DG 10 2_656 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 A DG 10 A N2 DG 10 2_656 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 A DG 9 A N1 DG 9 2_656 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 A DG 9 A O6 DG 9 2_656 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 A DG 9 A N2 DG 9 2_656 hydrog WATSON-CRICK A DA 3 A N1 DA 3 1_555 A DT 8 A N3 DT 8 2_656 hydrog WATSON-CRICK A DA 3 A N6 DA 3 1_555 A DT 8 A O4 DT 8 2_656 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 A DC 7 A N3 DC 7 2_656 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 A DC 7 A O2 DC 7 2_656 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 A DC 7 A N4 DC 7 2_656 hydrog WATSON-CRICK A DC 5 A N3 DC 5 1_555 A DG 6 A N1 DG 6 2_656 hydrog WATSON-CRICK A DC 5 A N4 DC 5 1_555 A DG 6 A O6 DG 6 2_656 hydrog WATSON-CRICK A DC 5 A O2 DC 5 1_555 A DG 6 A N2 DG 6 2_656 hydrog WATSON-CRICK A DG 6 A N1 DG 6 1_555 A DC 5 A N3 DC 5 2_656 hydrog WATSON-CRICK A DG 6 A N2 DG 6 1_555 A DC 5 A O2 DC 5 2_656 hydrog WATSON-CRICK A DG 6 A O6 DG 6 1_555 A DC 5 A N4 DC 5 2_656 hydrog WATSON-CRICK A DC 7 A N3 DC 7 1_555 A DG 4 A N1 DG 4 2_656 hydrog WATSON-CRICK A DC 7 A N4 DC 7 1_555 A DG 4 A O6 DG 4 2_656 hydrog WATSON-CRICK A DC 7 A O2 DC 7 1_555 A DG 4 A N2 DG 4 2_656 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 A DA 3 A N1 DA 3 2_656 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 A DA 3 A N6 DA 3 2_656 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 A DC 2 A N3 DC 2 2_656 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 A DC 2 A O2 DC 2 2_656 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 A DC 2 A N4 DC 2 2_656 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 A DC 1 A N3 DC 1 2_656 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 A DC 1 A O2 DC 1 2_656 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 A DC 1 A N4 DC 1 2_656 DNA divalent cations, DNA sequence-specific binding, shelxdna, B-DNA, DNA 1ENE PDB 1 1ENE 1 10 1ENE 1 10 1ENE A 1 1 10 BINDING SITE FOR RESIDUE CA A 111 A CA 111 Software 13 BINDING SITE FOR RESIDUE CA A 112 A CA 112 Software 8 BINDING SITE FOR RESIDUE CA A 113 A CA 113 Software 11 BINDING SITE FOR RESIDUE CA A 1113 A CA 1113 Software 14 BINDING SITE FOR RESIDUE CA A 114 A CA 114 Software 4 BINDING SITE FOR RESIDUE EOH A 1114 A EOH 1114 Software 12 BINDING SITE FOR RESIDUE EOH A 227 A EOH 227 Software 7 BINDING SITE FOR RESIDUE EOH A 244 A EOH 244 Software 6 A EOH 1114 G EOH 13 1_555 A HOH 1301 J HOH 13 1_555 A HOH 1301 J HOH 13 2_655 A HOH 1356 J HOH 13 1_555 A HOH 1359 J HOH 13 1_555 A HOH 1359 J HOH 13 2_655 A HOH 1360 J HOH 13 1_555 A HOH 1361 J HOH 13 1_555 A HOH 1362 J HOH 13 1_555 A HOH 1363 J HOH 13 2_655 A HOH 1363 J HOH 13 1_555 A HOH 1364 J HOH 13 2_655 A HOH 1364 J HOH 13 1_555 A HOH 222 J HOH 8 1_555 A HOH 1365 J HOH 8 1_555 A HOH 1366 J HOH 8 1_555 A HOH 1367 J HOH 8 1_555 A HOH 1368 J HOH 8 1_555 A HOH 1369 J HOH 8 1_555 A HOH 1370 J HOH 8 1_555 A HOH 1371 J HOH 8 1_555 A DG 9 A DG 9 11 2_656 A DG 10 A DG 10 11 2_656 A HOH 259 J HOH 11 1_555 A CA 1113 E CA 11 1_555 A HOH 1372 J HOH 11 1_555 A HOH 1373 J HOH 11 1_555 A HOH 1374 J HOH 11 1_555 A HOH 1375 J HOH 11 1_555 A HOH 1376 J HOH 11 1_555 A HOH 1379 J HOH 11 1_555 A HOH 1381 J HOH 11 1_555 A CA 113 D CA 14 1_555 A HOH 215 J HOH 14 1_555 A HOH 252 J HOH 14 1_555 A HOH 259 J HOH 14 1_555 A HOH 1372 J HOH 14 1_555 A HOH 1374 J HOH 14 1_555 A HOH 1375 J HOH 14 1_555 A HOH 1376 J HOH 14 1_555 A HOH 1377 J HOH 14 1_555 A HOH 1378 J HOH 14 1_555 A HOH 1379 J HOH 14 1_555 A HOH 1380 J HOH 14 1_555 A HOH 1381 J HOH 14 1_555 A HOH 1382 J HOH 14 1_555 A HOH 260 J HOH 4 1_555 A HOH 1383 J HOH 4 1_555 A HOH 1384 J HOH 4 1_555 A HOH 1385 J HOH 4 1_555 A DC 1 A DC 1 12 2_655 A DC 2 A DC 2 12 2_655 A DG 10 A DG 10 12 2_656 A CA 111 B CA 12 1_555 A HOH 202 J HOH 12 1_555 A HOH 228 J HOH 12 1_555 A HOH 229 J HOH 12 1_555 A HOH 1301 J HOH 12 2_655 A HOH 1356 J HOH 12 1_555 A HOH 1360 J HOH 12 1_555 A HOH 1362 J HOH 12 1_555 A HOH 1363 J HOH 12 1_555 A DC 5 A DC 5 7 3_545 A DT 8 A DT 8 7 2_656 A HOH 204 J HOH 7 1_555 A HOH 207 J HOH 7 1_555 A HOH 241 J HOH 7 1_555 A EOH 244 I EOH 7 1_555 A HOH 1358 J HOH 7 1_555 A DG 6 A DG 6 6 2_656 A DC 7 A DC 7 6 2_656 A EOH 227 H EOH 6 1_555 A HOH 241 J HOH 6 1_555 A HOH 250 J HOH 6 3_545 A HOH 1342 J HOH 6 4_646 5 monoclinic C 1 2 1