0.023256 0.000000 0.002897 0.000000 0.013210 0.000000 0.000000 0.000000 0.023490 0.00000 0.00000 0.00000 CIS PROLINE - PRO E 23 CIS PROLINE - PRO E 133 Blundell, T.L. Dealwis, C.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 97.10 90.00 43.000 75.700 42.900 C32 H52 N6 O7 P 1 663.765 N-(tert-butoxycarbonyl)-L-phenylalanyl-N-{(1S)-1-[(R)-hydroxy(2-{[(2S)-2-methylbutyl]amino}-2-oxoethyl)phosphoryl]-3-methylbutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide PD-130,328 peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 211 919 941 10.1016/0022-2836(90)90084-Y 2179568 X-ray analyses of aspartic proteinases. The three-dimensional structure at 2.1 A resolution of endothiapepsin. 1990 UK J.Mol.Biol. JMOBAK 0070 0022-2836 216 1017 X-Ray Analyses of Aspartic Proteinases. III Three-Dimensional Structure of Endothiapepsin Complexed with a Transition-State Isostere Inhibitor of Renin at 1.6 Angstroms Resolution 1990 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 33813.855 ENDOTHIAPEPSIN 3.4.23.22 1 man polymer 663.765 N-(tert-butoxycarbonyl)-L-phenylalanyl-N-{(1S)-1-[(R)-hydroxy(2-{[(2S)-2-methylbutyl]amino}-2-oxoethyl)phosphoryl]-3-methylbutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide 1 syn non-polymer 96.063 SULFATE ION 2 syn non-polymer 18.015 water 264 nat water no no STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYG DGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTAD LGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS GAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGA TTPTLGFASK STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYG DGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKASLDSPVFTAD LGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVS GAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGA TTPTLGFASK E polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chestnut blight fungus sample 5116 Cryphonectria parasitica 2.01 38.80 pdbx_database_status struct_conf struct_conf_type repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Derived calculations Other 1 0 1994-01-31 1 1 2008-03-03 1 2 2011-07-13 1 3 2012-12-12 1 4 2017-11-29 _pdbx_database_status.process_site Y BNL 1992-03-11 REL 0EM N-(tert-butoxycarbonyl)-L-phenylalanyl-N-{(1S)-1-[(R)-hydroxy(2-{[(2S)-2-methylbutyl]amino}-2-oxoethyl)phosphoryl]-3-methylbutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide SO4 SULFATE ION HOH water THE PHOSPHINATE INHIBITOR PD130328 COMPLEXED WITH ENDOTHIAPEPSIN HAS TWO SHORT HYDROGEN BONDS OF 2.44 ANGSTROMS AND 2.51 ANGSTROMS BETWEEN ASP 32 AND P-02 OF THE PHOSPHINATE AND BETWEEN ASP 215 AND P-01 OF THE PHOSPHINATE, RESPECTIVELY. SHORT HYDROGEN BONDS OF THE SAME MAGNITUDE HAVE BEEN OBSERVED WITH SEVERAL SMALL MOLECULE STRUCTURES OF PHOSPHOROUS DERIVATIVES (CALLERI AND SPEAKMAN 1964; SPEAKMAN 1972; FENSKE ET AL., 1973). THE COMPLETE SEQUENCE WAS DETERMINED BY V. PEDERSEN AS TRYPTIC FRAGMENTS WHICH WERE ALIGNED IN THE ELECTRON DENSITY. HOMOLOGY WITH OTHER ASPARTIC PROTEINASES WAS USED TO RESOLVE ALIGNMENT AMBIGUITIES. THE RESIDUE NUMBERING IS BASED ON THAT OF PORCINE PEPSIN. Inhibitor N-(tert-butoxycarbonyl)-L-phenylalanyl-N-{(1S)-1-[(R)-hydroxy(2-{[(2S)-2-methylbutyl]amino}-2-oxoethyl)phosphoryl]-3- methylbutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide Peptide-like BOC 1 2 0EM 0EM 822 E SO4 1 3 SO4 SO4 823 E SO4 3 3 SO4 SO4 824 E HOH 2 4 HOH HOH 825 E HOH 3 4 HOH HOH 826 E HOH 4 4 HOH HOH 827 E HOH 5 4 HOH HOH 828 E HOH 6 4 HOH HOH 829 E HOH 7 4 HOH HOH 830 E HOH 8 4 HOH HOH 831 E HOH 9 4 HOH HOH 832 E HOH 10 4 HOH HOH 833 E HOH 11 4 HOH HOH 834 E HOH 12 4 HOH HOH 835 E HOH 13 4 HOH HOH 836 E HOH 14 4 HOH HOH 837 E HOH 15 4 HOH HOH 838 E HOH 16 4 HOH HOH 839 E HOH 17 4 HOH HOH 840 E HOH 18 4 HOH HOH 841 E HOH 19 4 HOH HOH 842 E HOH 20 4 HOH HOH 843 E HOH 21 4 HOH HOH 844 E HOH 22 4 HOH HOH 845 E HOH 23 4 HOH HOH 846 E HOH 24 4 HOH HOH 847 E HOH 25 4 HOH HOH 848 E HOH 26 4 HOH HOH 849 E HOH 27 4 HOH HOH 850 E HOH 28 4 HOH HOH 851 E HOH 29 4 HOH HOH 852 E HOH 30 4 HOH HOH 853 E HOH 31 4 HOH HOH 854 E HOH 32 4 HOH HOH 855 E HOH 33 4 HOH HOH 856 E HOH 34 4 HOH HOH 857 E HOH 35 4 HOH HOH 858 E HOH 36 4 HOH HOH 859 E HOH 37 4 HOH HOH 860 E HOH 38 4 HOH HOH 861 E HOH 39 4 HOH HOH 862 E HOH 40 4 HOH HOH 863 E HOH 41 4 HOH HOH 864 E HOH 42 4 HOH HOH 865 E HOH 43 4 HOH HOH 866 E HOH 44 4 HOH HOH 867 E HOH 45 4 HOH HOH 868 E HOH 46 4 HOH HOH 869 E HOH 47 4 HOH HOH 870 E HOH 48 4 HOH HOH 871 E HOH 49 4 HOH HOH 872 E HOH 50 4 HOH HOH 873 E HOH 51 4 HOH HOH 874 E HOH 52 4 HOH HOH 875 E HOH 53 4 HOH HOH 876 E HOH 54 4 HOH HOH 877 E HOH 55 4 HOH HOH 878 E HOH 56 4 HOH HOH 879 E HOH 57 4 HOH HOH 880 E HOH 58 4 HOH HOH 881 E HOH 59 4 HOH HOH 882 E HOH 60 4 HOH HOH 883 E HOH 61 4 HOH HOH 884 E HOH 62 4 HOH HOH 885 E HOH 63 4 HOH HOH 886 E HOH 64 4 HOH HOH 887 E HOH 65 4 HOH HOH 888 E HOH 66 4 HOH HOH 889 E HOH 67 4 HOH HOH 890 E HOH 68 4 HOH HOH 891 E HOH 69 4 HOH HOH 892 E HOH 70 4 HOH HOH 893 E HOH 71 4 HOH HOH 894 E HOH 72 4 HOH HOH 895 E HOH 73 4 HOH HOH 896 E HOH 74 4 HOH HOH 897 E HOH 75 4 HOH HOH 898 E HOH 76 4 HOH HOH 899 E HOH 77 4 HOH HOH 900 E HOH 78 4 HOH HOH 901 E HOH 79 4 HOH HOH 902 E HOH 80 4 HOH HOH 903 E HOH 81 4 HOH HOH 904 E HOH 82 4 HOH HOH 905 E HOH 83 4 HOH HOH 906 E HOH 84 4 HOH HOH 907 E HOH 85 4 HOH HOH 908 E HOH 86 4 HOH HOH 909 E HOH 87 4 HOH HOH 910 E HOH 88 4 HOH HOH 911 E HOH 89 4 HOH HOH 912 E HOH 90 4 HOH HOH 913 E HOH 91 4 HOH HOH 914 E HOH 92 4 HOH HOH 915 E HOH 93 4 HOH HOH 916 E HOH 94 4 HOH HOH 917 E HOH 95 4 HOH HOH 918 E HOH 96 4 HOH HOH 919 E HOH 97 4 HOH HOH 920 E HOH 98 4 HOH HOH 921 E HOH 99 4 HOH HOH 922 E HOH 100 4 HOH HOH 923 E HOH 101 4 HOH HOH 924 E HOH 102 4 HOH HOH 925 E HOH 103 4 HOH HOH 926 E HOH 104 4 HOH HOH 927 E HOH 105 4 HOH HOH 928 E HOH 106 4 HOH HOH 929 E HOH 107 4 HOH HOH 930 E HOH 108 4 HOH HOH 931 E HOH 109 4 HOH HOH 932 E HOH 110 4 HOH HOH 933 E HOH 111 4 HOH HOH 934 E HOH 112 4 HOH HOH 935 E HOH 113 4 HOH HOH 936 E HOH 114 4 HOH HOH 937 E HOH 115 4 HOH HOH 938 E HOH 116 4 HOH HOH 939 E HOH 117 4 HOH HOH 940 E HOH 118 4 HOH HOH 941 E HOH 119 4 HOH HOH 942 E HOH 120 4 HOH HOH 943 E HOH 121 4 HOH HOH 944 E HOH 122 4 HOH HOH 945 E HOH 123 4 HOH HOH 946 E HOH 124 4 HOH HOH 947 E HOH 125 4 HOH HOH 948 E HOH 126 4 HOH HOH 949 E HOH 127 4 HOH HOH 950 E HOH 128 4 HOH HOH 951 E HOH 129 4 HOH HOH 952 E HOH 130 4 HOH HOH 953 E HOH 131 4 HOH HOH 954 E HOH 132 4 HOH HOH 955 E HOH 133 4 HOH HOH 956 E HOH 134 4 HOH HOH 957 E HOH 135 4 HOH HOH 958 E HOH 136 4 HOH HOH 959 E HOH 137 4 HOH HOH 960 E HOH 138 4 HOH HOH 961 E HOH 139 4 HOH HOH 962 E HOH 140 4 HOH HOH 963 E HOH 141 4 HOH HOH 964 E HOH 142 4 HOH HOH 965 E HOH 143 4 HOH HOH 966 E HOH 144 4 HOH HOH 967 E HOH 145 4 HOH HOH 968 E HOH 146 4 HOH HOH 969 E HOH 147 4 HOH HOH 970 E HOH 148 4 HOH HOH 971 E HOH 149 4 HOH HOH 972 E HOH 150 4 HOH HOH 973 E HOH 151 4 HOH HOH 974 E HOH 152 4 HOH HOH 975 E HOH 153 4 HOH HOH 976 E HOH 154 4 HOH HOH 977 E HOH 155 4 HOH HOH 978 E HOH 156 4 HOH HOH 979 E HOH 157 4 HOH HOH 980 E HOH 158 4 HOH HOH 981 E HOH 159 4 HOH HOH 982 E HOH 160 4 HOH HOH 983 E HOH 161 4 HOH HOH 984 E HOH 162 4 HOH HOH 985 E HOH 163 4 HOH HOH 986 E HOH 164 4 HOH HOH 987 E HOH 165 4 HOH HOH 988 E HOH 166 4 HOH HOH 989 E HOH 167 4 HOH HOH 990 E HOH 168 4 HOH HOH 991 E HOH 169 4 HOH HOH 992 E HOH 170 4 HOH HOH 993 E HOH 171 4 HOH HOH 994 E HOH 172 4 HOH HOH 995 E HOH 173 4 HOH HOH 996 E HOH 174 4 HOH HOH 997 E HOH 175 4 HOH HOH 998 E HOH 176 4 HOH HOH 999 E HOH 177 4 HOH HOH 1000 E HOH 178 4 HOH HOH 1001 E HOH 179 4 HOH HOH 1002 E HOH 180 4 HOH HOH 1003 E HOH 181 4 HOH HOH 1004 E HOH 182 4 HOH HOH 1005 E HOH 183 4 HOH HOH 1006 E HOH 184 4 HOH HOH 1007 E HOH 185 4 HOH HOH 1008 E HOH 186 4 HOH HOH 1009 E HOH 187 4 HOH HOH 1010 E HOH 188 4 HOH HOH 1011 E HOH 189 4 HOH HOH 1012 E HOH 190 4 HOH HOH 1013 E HOH 191 4 HOH HOH 1014 E HOH 192 4 HOH HOH 1015 E HOH 193 4 HOH HOH 1016 E HOH 194 4 HOH HOH 1017 E HOH 195 4 HOH HOH 1018 E HOH 196 4 HOH HOH 1019 E HOH 197 4 HOH HOH 1020 E HOH 198 4 HOH HOH 1021 E HOH 199 4 HOH HOH 1022 E HOH 200 4 HOH HOH 1023 E HOH 201 4 HOH HOH 1024 E HOH 202 4 HOH HOH 1025 E HOH 203 4 HOH HOH 1026 E HOH 204 4 HOH HOH 1027 E HOH 205 4 HOH HOH 1028 E HOH 206 4 HOH HOH 1029 E HOH 207 4 HOH HOH 1030 E HOH 208 4 HOH HOH 1031 E HOH 209 4 HOH HOH 1032 E HOH 210 4 HOH HOH 1033 E HOH 211 4 HOH HOH 1034 E HOH 212 4 HOH HOH 1035 E HOH 213 4 HOH HOH 1036 E HOH 215 4 HOH HOH 1037 E HOH 216 4 HOH HOH 1038 E HOH 217 4 HOH HOH 1039 E HOH 218 4 HOH HOH 1040 E HOH 219 4 HOH HOH 1041 E HOH 220 4 HOH HOH 1042 E HOH 221 4 HOH HOH 1043 E HOH 222 4 HOH HOH 1044 E HOH 224 4 HOH HOH 1045 E HOH 225 4 HOH HOH 1046 E HOH 226 4 HOH HOH 1047 E HOH 227 4 HOH HOH 1048 E HOH 228 4 HOH HOH 1049 E HOH 229 4 HOH HOH 1050 E HOH 230 4 HOH HOH 1051 E HOH 231 4 HOH HOH 1052 E HOH 232 4 HOH HOH 1053 E HOH 233 4 HOH HOH 1054 E HOH 234 4 HOH HOH 1055 E HOH 236 4 HOH HOH 1056 E HOH 237 4 HOH HOH 1057 E HOH 238 4 HOH HOH 1058 E HOH 239 4 HOH HOH 1059 E HOH 240 4 HOH HOH 1060 E HOH 241 4 HOH HOH 1061 E HOH 242 4 HOH HOH 1062 E HOH 243 4 HOH HOH 1063 E HOH 244 4 HOH HOH 1064 E HOH 245 4 HOH HOH 1065 E HOH 246 4 HOH HOH 1066 E HOH 247 4 HOH HOH 1067 E HOH 248 4 HOH HOH 1068 E HOH 249 4 HOH HOH 1069 E HOH 250 4 HOH HOH 1070 E HOH 251 4 HOH HOH 1071 E HOH 252 4 HOH HOH 1072 E HOH 253 4 HOH HOH 1073 E HOH 254 4 HOH HOH 1074 E HOH 255 4 HOH HOH 1075 E HOH 256 4 HOH HOH 1076 E HOH 257 4 HOH HOH 1077 E HOH 258 4 HOH HOH 1078 E HOH 259 4 HOH HOH 1079 E HOH 260 4 HOH HOH 1080 E HOH 261 4 HOH HOH 1081 E HOH 262 4 HOH HOH 1082 E HOH 263 4 HOH HOH 1083 E HOH 264 4 HOH HOH 1084 E HOH 265 4 HOH HOH 1085 E HOH 267 4 HOH HOH 1086 E HOH 1 4 HOH HOH 1087 E HOH 223 4 HOH HOH 1088 E SER -2 n 1 SER -2 E THR -1 n 2 THR -1 E GLY 0 n 3 GLY 0 E SER 1 n 4 SER 1 E ALA 2 n 5 ALA 2 E THR 3 n 6 THR 3 E THR 4 n 7 THR 4 E THR 5 n 8 THR 5 E PRO 6 n 9 PRO 6 E ILE 7 n 10 ILE 7 E ASP 8 n 11 ASP 8 E SER 9 n 12 SER 9 E LEU 10 n 13 LEU 10 E ASP 11 n 14 ASP 11 E ASP 12 n 15 ASP 12 E ALA 13 n 16 ALA 13 E TYR 14 n 17 TYR 14 E ILE 15 n 18 ILE 15 E THR 16 n 19 THR 16 E PRO 17 n 20 PRO 17 E VAL 18 n 21 VAL 18 E GLN 19 n 22 GLN 19 E ILE 20 n 23 ILE 20 E GLY 21 n 24 GLY 21 E THR 22 n 25 THR 22 E PRO 23 n 26 PRO 23 E ALA 24 n 27 ALA 24 E GLN 25 n 28 GLN 25 E THR 26 n 29 THR 26 E LEU 27 n 30 LEU 27 E ASN 28 n 31 ASN 28 E LEU 29 n 32 LEU 29 E ASP 30 n 33 ASP 30 E PHE 31 n 34 PHE 31 E ASP 32 n 35 ASP 32 E THR 33 n 36 THR 33 E GLY 34 n 37 GLY 34 E SER 35 n 38 SER 35 E SER 36 n 39 SER 36 E ASP 37 n 40 ASP 37 E LEU 38 n 41 LEU 38 E TRP 39 n 42 TRP 39 E VAL 40 n 43 VAL 40 E PHE 41 n 44 PHE 41 E SER 42 n 45 SER 42 E SER 43 n 46 SER 43 E GLU 44 n 47 GLU 44 E THR 45 n 48 THR 45 E THR 46 n 49 THR 46 E ALA 47 n 50 ALA 47 E SER 48 n 51 SER 48 E GLU 49 n 52 GLU 49 E VAL 50 n 53 VAL 50 E ASP 51 n 54 ASP 51 E GLY 52 n 55 GLY 52 E GLN 53 n 56 GLN 53 E THR 54 n 57 THR 54 E ILE 55 n 58 ILE 55 E TYR 56 n 59 TYR 56 E THR 57 n 60 THR 57 E PRO 58 n 61 PRO 58 E SER 59 n 62 SER 59 E LYS 60 n 63 LYS 60 E SER 61 n 64 SER 61 E THR 62 n 65 THR 62 E THR 63 n 66 THR 63 E ALA 63 n 67 A ALA 63 E LYS 64 n 68 LYS 64 E LEU 65 n 69 LEU 65 E LEU 66 n 70 LEU 66 E SER 67 n 71 SER 67 E GLY 68 n 72 GLY 68 E ALA 69 n 73 ALA 69 E THR 70 n 74 THR 70 E TRP 71 n 75 TRP 71 E SER 72 n 76 SER 72 E ILE 73 n 77 ILE 73 E SER 74 n 78 SER 74 E TYR 75 n 79 TYR 75 E GLY 76 n 80 GLY 76 E ASP 77 n 81 ASP 77 E GLY 78 n 82 GLY 78 E SER 79 n 83 SER 79 E SER 80 n 84 SER 80 E SER 80 n 85 A SER 80 E SER 81 n 86 SER 81 E GLY 82 n 87 GLY 82 E ASP 83 n 88 ASP 83 E VAL 84 n 89 VAL 84 E TYR 85 n 90 TYR 85 E THR 86 n 91 THR 86 E ASP 87 n 92 ASP 87 E THR 88 n 93 THR 88 E VAL 89 n 94 VAL 89 E SER 90 n 95 SER 90 E VAL 91 n 96 VAL 91 E GLY 92 n 97 GLY 92 E GLY 93 n 98 GLY 93 E LEU 94 n 99 LEU 94 E THR 95 n 100 THR 95 E VAL 96 n 101 VAL 96 E THR 97 n 102 THR 97 E GLY 98 n 103 GLY 98 E GLN 99 n 104 GLN 99 E ALA 100 n 105 ALA 100 E VAL 101 n 106 VAL 101 E GLU 102 n 107 GLU 102 E SER 103 n 108 SER 103 E ALA 104 n 109 ALA 104 E LYS 105 n 110 LYS 105 E LYS 106 n 111 LYS 106 E VAL 107 n 112 VAL 107 E SER 108 n 113 SER 108 E SER 109 n 114 SER 109 E SER 110 n 115 SER 110 E PHE 111 n 116 PHE 111 E THR 112 n 117 THR 112 E GLU 113 n 118 GLU 113 E ASP 114 n 119 ASP 114 E SER 115 n 120 SER 115 E THR 116 n 121 THR 116 E ILE 117 n 122 ILE 117 E ASP 118 n 123 ASP 118 E GLY 119 n 124 GLY 119 E LEU 120 n 125 LEU 120 E LEU 121 n 126 LEU 121 E GLY 122 n 127 GLY 122 E LEU 123 n 128 LEU 123 E ALA 124 n 129 ALA 124 E PHE 125 n 130 PHE 125 E SER 126 n 131 SER 126 E THR 127 n 132 THR 127 E LEU 128 n 133 LEU 128 E ASN 129 n 134 ASN 129 E THR 130 n 135 THR 130 E VAL 131 n 136 VAL 131 E SER 132 n 137 SER 132 E PRO 133 n 138 PRO 133 E THR 134 n 139 THR 134 E GLN 134 n 140 A GLN 134 E GLN 135 n 141 GLN 135 E LYS 136 n 142 LYS 136 E THR 137 n 143 THR 137 E PHE 138 n 144 PHE 138 E PHE 139 n 145 PHE 139 E ASP 140 n 146 ASP 140 E ASN 141 n 147 ASN 141 E ALA 142 n 148 ALA 142 E LYS 143 n 149 LYS 143 E ALA 144 n 150 ALA 144 E SER 145 n 151 SER 145 E LEU 146 n 152 LEU 146 E ASP 147 n 153 ASP 147 E SER 148 n 154 SER 148 E PRO 149 n 155 PRO 149 E VAL 150 n 156 VAL 150 E PHE 151 n 157 PHE 151 E THR 152 n 158 THR 152 E ALA 153 n 159 ALA 153 E ASP 154 n 160 ASP 154 E LEU 155 n 161 LEU 155 E GLY 156 n 162 GLY 156 E TYR 157 n 163 TYR 157 E HIS 158 n 164 HIS 158 E ALA 159 n 165 ALA 159 E PRO 162 n 166 PRO 162 E GLY 163 n 167 GLY 163 E THR 164 n 168 THR 164 E TYR 165 n 169 TYR 165 E ASN 166 n 170 ASN 166 E PHE 167 n 171 PHE 167 E GLY 168 n 172 GLY 168 E PHE 169 n 173 PHE 169 E ILE 170 n 174 ILE 170 E ASP 171 n 175 ASP 171 E THR 172 n 176 THR 172 E THR 173 n 177 THR 173 E ALA 174 n 178 ALA 174 E TYR 175 n 179 TYR 175 E THR 176 n 180 THR 176 E GLY 177 n 181 GLY 177 E SER 178 n 182 SER 178 E ILE 179 n 183 ILE 179 E THR 180 n 184 THR 180 E TYR 181 n 185 TYR 181 E THR 182 n 186 THR 182 E ALA 183 n 187 ALA 183 E VAL 184 n 188 VAL 184 E SER 184 n 189 A SER 184 E THR 185 n 190 THR 185 E LYS 186 n 191 LYS 186 E GLN 187 n 192 GLN 187 E GLY 188 n 193 GLY 188 E PHE 189 n 194 PHE 189 E TRP 190 n 195 TRP 190 E GLU 191 n 196 GLU 191 E TRP 192 n 197 TRP 192 E THR 193 n 198 THR 193 E SER 194 n 199 SER 194 E THR 195 n 200 THR 195 E GLY 196 n 201 GLY 196 E TYR 197 n 202 TYR 197 E ALA 198 n 203 ALA 198 E VAL 199 n 204 VAL 199 E GLY 200 n 205 GLY 200 E SER 201 n 206 SER 201 E GLY 202 n 207 GLY 202 E THR 203 n 208 THR 203 E PHE 203 n 209 A PHE 203 E LYS 204 n 210 LYS 204 E SER 204 n 211 A SER 204 E THR 205 n 212 THR 205 E SER 206 n 213 SER 206 E ILE 207 n 214 ILE 207 E ASP 211 n 215 ASP 211 E GLY 212 n 216 GLY 212 E ILE 213 n 217 ILE 213 E ALA 214 n 218 ALA 214 E ASP 215 n 219 ASP 215 E THR 216 n 220 THR 216 E GLY 217 n 221 GLY 217 E THR 218 n 222 THR 218 E THR 219 n 223 THR 219 E LEU 220 n 224 LEU 220 E LEU 221 n 225 LEU 221 E TYR 222 n 226 TYR 222 E LEU 223 n 227 LEU 223 E PRO 224 n 228 PRO 224 E ALA 225 n 229 ALA 225 E THR 226 n 230 THR 226 E VAL 227 n 231 VAL 227 E VAL 228 n 232 VAL 228 E SER 229 n 233 SER 229 E ALA 230 n 234 ALA 230 E TYR 231 n 235 TYR 231 E TRP 232 n 236 TRP 232 E ALA 233 n 237 ALA 233 E GLN 234 n 238 GLN 234 E VAL 235 n 239 VAL 235 E SER 236 n 240 SER 236 E GLY 237 n 241 GLY 237 E ALA 238 n 242 ALA 238 E LYS 238 n 243 A LYS 238 E SER 239 n 244 SER 239 E SER 240 n 245 SER 240 E SER 241 n 246 SER 241 E SER 242 n 247 SER 242 E VAL 243 n 248 VAL 243 E GLY 244 n 249 GLY 244 E GLY 245 n 250 GLY 245 E TYR 246 n 251 TYR 246 E VAL 247 n 252 VAL 247 E PHE 248 n 253 PHE 248 E PRO 249 n 254 PRO 249 E CYS 250 n 255 CYS 250 E SER 251 n 256 SER 251 E ALA 252 n 257 ALA 252 E THR 253 n 258 THR 253 E LEU 254 n 259 LEU 254 E PRO 255 n 260 PRO 255 E SER 256 n 261 SER 256 E PHE 257 n 262 PHE 257 E THR 258 n 263 THR 258 E PHE 259 n 264 PHE 259 E GLY 260 n 265 GLY 260 E VAL 261 n 266 VAL 261 E GLY 262 n 267 GLY 262 E SER 263 n 268 SER 263 E ALA 264 n 269 ALA 264 E ARG 265 n 270 ARG 265 E ILE 266 n 271 ILE 266 E VAL 267 n 272 VAL 267 E ILE 268 n 273 ILE 268 E PRO 269 n 274 PRO 269 E GLY 270 n 275 GLY 270 E ASP 271 n 276 ASP 271 E TYR 272 n 277 TYR 272 E ILE 273 n 278 ILE 273 E ASP 274 n 279 ASP 274 E PHE 275 n 280 PHE 275 E GLY 276 n 281 GLY 276 E PRO 277 n 282 PRO 277 E ILE 278 n 283 ILE 278 E SER 279 n 284 SER 279 E THR 280 n 285 THR 280 E GLY 281 n 286 GLY 281 E SER 282 n 287 SER 282 E SER 282 n 288 A SER 282 E SER 821 n 289 SER 821 E CYS 283 n 290 CYS 283 E PHE 284 n 291 PHE 284 E GLY 285 n 292 GLY 285 E GLY 286 n 293 GLY 286 E ILE 287 n 294 ILE 287 E GLN 288 n 295 GLN 288 E SER 289 n 296 SER 289 E SER 294 n 297 SER 294 E ALA 295 n 298 ALA 295 E GLY 296 n 299 GLY 296 E ILE 297 n 300 ILE 297 E GLY 298 n 301 GLY 298 E ILE 299 n 302 ILE 299 E ASN 300 n 303 ASN 300 E ILE 301 n 304 ILE 301 E PHE 302 n 305 PHE 302 E GLY 303 n 306 GLY 303 E ASP 304 n 307 ASP 304 E VAL 305 n 308 VAL 305 E ALA 306 n 309 ALA 306 E LEU 307 n 310 LEU 307 E LYS 308 n 311 LYS 308 E ALA 309 n 312 ALA 309 E ALA 310 n 313 ALA 310 E PHE 311 n 314 PHE 311 E VAL 312 n 315 VAL 312 E VAL 313 n 316 VAL 313 E PHE 314 n 317 PHE 314 E ASN 315 n 318 ASN 315 E GLY 316 n 319 GLY 316 E ALA 317 n 320 ALA 317 E THR 318 n 321 THR 318 E THR 319 n 322 THR 319 E PRO 319 n 323 A PRO 319 E THR 320 n 324 THR 320 E LEU 321 n 325 LEU 321 E GLY 322 n 326 GLY 322 E PHE 323 n 327 PHE 323 E ALA 324 n 328 ALA 324 E SER 325 n 329 SER 325 E LYS 326 n 330 LYS 326 E author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 E O THR 5 A O THR 8 E N ILE 15 A N ILE 18 E O THR 16 A O THR 19 E N LEU 29 A N LEU 32 E O ASP 30 A O ASP 33 E N LEU 121 A N LEU 126 E O LEU 120 A O LEU 125 E N TRP 39 A N TRP 42 E O VAL 40 A O VAL 43 E N ALA 104 A N ALA 109 E O SER 103 A O SER 108 E N ASP 83 A N ASP 88 E O GLY 82 A O GLY 87 E N TRP 71 A N TRP 75 A E O SER 184 A O SER 189 E N GLU 191 A N GLU 196 E O TRP 192 A O TRP 197 E N GLY 212 A N GLY 216 E O ILE 213 A O ILE 217 E N PHE 302 A N PHE 305 E O ILE 301 A O ILE 304 E N TYR 222 A N TYR 226 E O LEU 221 A O LEU 225 E N GLN 288 A N GLN 295 E O CYS 283 A O CYS 290 E N PHE 248 A N PHE 253 E O VAL 247 A O VAL 252 A E N LYS 238 A N LYS 243 E O GLN 25 A O GLN 28 E N ILE 20 A N ILE 23 E O GLN 19 A O GLN 22 E N SER 90 A N SER 95 E O VAL 89 A O VAL 94 E N VAL 96 A N VAL 101 E O LYS 204 A O LYS 210 E N TYR 197 A N TYR 202 E O GLY 196 A O GLY 201 E N GLY 260 A N GLY 265 E O PHE 259 A O PHE 264 E N ILE 266 A N ILE 271 E O ALA 2 A O ALA 5 E N TYR 165 A N TYR 169 E O THR 164 A O THR 168 E N ASP 154 A N ASP 160 E O ALA 153 A O ALA 159 E N VAL 312 A N VAL 315 E O VAL 313 A O VAL 316 E N GLY 322 A N GLY 326 E O LEU 321 A O LEU 325 E N THR 182 A N THR 186 1 E E O O HOH HOH 989 1064 1.37 1 15.48 1.50 110.90 126.38 E E E CA CB CG2 VAL VAL VAL 150 150 150 N 1 14.22 1.50 110.90 125.12 E E E CA CB CG2 VAL VAL VAL 305 305 305 N 1 E E O O HOH HOH 1046 1061 0.21 1_555 2_656 1 E E O O HOH HOH 909 1037 1.92 1_555 1_655 1 E ASP 51 -87.28 -128.18 THE QUANTITY GIVEN IN THE TEMPERATURE FACTOR FIELD OF THE *ATOM* AND *HETATM* RECORDS BELOW IS U**2, WHICH IS THE MEAN-SQUARE AMPLITUDE OF ATOMIC VIBRATION. THE TEMPERATURE FACTOR, B, CAN BE DERIVED BY THE FOLLOWING RELATION - B = 8 * (PI)**2 * U**2. IT IS AN INDICATION OF POSSIBLE ERRORS IN THE REFINEMENT THAT SOME ARE SLIGHTLY NEGATIVE. 0.17 1.9 1 1.9 264 2709 56 0 2389 0.009 0.007 refinement RESTRAIN ENDOTHIAPEPSIN (E.C.3.4.23.22) COMPLEX WITH THE INHIBITOR PD130328 X-RAY ANALYSES OF ASPARTIC PROTEINASES. THE THREE-DIMENSIONAL STRUCTURE AT 2.1 ANGSTROMS RESOLUTION OF ENDOTHIAPEPSIN 1 N N 2 N N 3 N N 3 N N 4 N N E THR 57 A THR 60 HELX_P E SER 61 A SER 64 5 H1 5 E SER 108 A SER 113 HELX_P E GLU 113 A GLU 118 1 H2 6 E THR 137 A THR 143 HELX_P E LYS 143 A LYS 149 1 H3 7 E PRO 224 A PRO 228 HELX_P E GLN 234 A GLN 238 1 H4 11 E GLY 303 A GLY 306 HELX_P E LYS 308 A LYS 311 1 H5 6 disulf 2.085 E CYS 250 A SG CYS 255 1_555 E CYS 283 A SG CYS 290 1_555 HYDROLASE/HYDROLASE INHIBITOR ACID PROTEINASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX E THR 22 A THR 25 1 E PRO 23 A PRO 26 -0.35 E SER 132 A SER 137 1 E PRO 133 A PRO 138 0.07 CARP_CRYPA UNP 1 1 P11838 MSSPLKNALVTAMLAGGALSSPTKQHVGIPVNASPEVGPGKYSFKQVRNPNYKFNGPLSVKKTYLKYGVPIPAWLEDAVQ NSTSGLAERSTGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLS GATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV VSAYWAQVSGAKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALK AAFVVFNGATTPTLGFASK 90 419 1ENT -2 326 P11838 E 1 1 330 8 8 4 4 6 anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel E THR -1 A THR 2 E ILE 7 A ILE 10 E ALA 13 A ALA 16 E GLY 21 A GLY 24 E ALA 24 A ALA 27 E THR 33 A THR 36 E ILE 117 A ILE 122 E ALA 124 A ALA 129 E SER 36 A SER 39 E GLU 44 A GLU 47 E GLN 99 A GLN 104 E LYS 105 A LYS 110 E GLY 78 A GLY 82 E ASP 87 A ASP 92 E TRP 71 A TRP 75 E GLY 76 A GLY 80 E SER 178 A SER 182 E LYS 186 A LYS 191 E PHE 189 A PHE 194 E THR 195 A THR 200 E ASP 211 A ASP 215 E THR 216 A THR 220 E ILE 299 A ILE 302 E PHE 302 A PHE 305 E THR 219 A THR 223 E PRO 224 A PRO 228 E SER 282 A SER 287 E SER 294 A SER 297 E GLY 244 A GLY 249 E CYS 250 A CYS 255 E ALA 238 A ALA 242 E SER 241 A SER 246 E ALA 24 A ALA 27 E ASN 28 A ASN 31 E PRO 17 A PRO 20 E GLY 21 A GLY 24 E VAL 89 A VAL 94 E VAL 91 A VAL 96 E LEU 94 A LEU 99 E VAL 96 A VAL 101 E GLY 202 A GLY 207 E LYS 204 A LYS 210 E GLY 196 A GLY 201 E VAL 199 A VAL 204 E SER 256 A SER 261 E VAL 261 A VAL 266 E ALA 264 A ALA 269 E ILE 268 A ILE 273 E THR -1 A THR 2 E PRO 6 A PRO 9 E PRO 162 A PRO 166 E THR 172 A THR 176 E SER 148 A SER 154 E TYR 157 A TYR 163 E ALA 310 A ALA 313 E GLY 316 A GLY 319 E THR 319 A THR 322 E LYS 326 A LYS 330 E SER 178 A SER 182 E LYS 186 A LYS 191 BINDING SITE FOR RESIDUE 0EM E 822 Software 16 BINDING SITE FOR RESIDUE SO4 E 823 Software 5 BINDING SITE FOR RESIDUE SO4 E 824 Software 7 CATALYTIC SITE Author 2 E ASP 32 A ASP 35 16 1_555 E GLY 34 A GLY 37 16 1_555 E SER 35 A SER 38 16 1_555 E TYR 75 A TYR 79 16 1_555 E GLY 76 A GLY 80 16 1_555 E ASP 77 A ASP 81 16 1_555 E ASP 114 A ASP 119 16 1_555 E ILE 117 A ILE 122 16 1_555 E PHE 189 A PHE 194 16 1_555 E ASP 215 A ASP 219 16 1_555 E GLY 217 A GLY 221 16 1_555 E THR 218 A THR 222 16 1_555 E THR 219 A THR 223 16 1_555 E ILE 297 A ILE 300 16 1_555 E ILE 301 A ILE 304 16 1_555 E HOH 1087 E HOH 16 1_555 E LYS 238 A LYS 243 A 5 1_555 E SER 240 A SER 245 5 1_555 E SER 241 A SER 246 5 1_555 E SER 242 A SER 247 5 1_555 E HOH 1013 E HOH 5 1_555 E SER 108 A SER 113 7 1_555 E SER 109 A SER 114 7 1_555 E THR 318 A THR 321 7 1_556 E THR 319 A THR 322 7 1_556 E HOH 996 E HOH 7 1_555 E HOH 1001 E HOH 7 1_555 E HOH 1035 E HOH 7 1_555 E ASP 32 A ASP 35 2 1_555 E ASP 215 A ASP 219 2 1_555 4 P 1 21 1