0.006873
0.000000
0.000000
0.000000
0.006873
0.000000
0.000000
0.000000
0.006873
0.00000
0.00000
0.00000
Vetting, M.W.
D'Argenio, D.A.
Ornston, L.N.
Ohlendorf, D.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
145.500
145.500
145.500
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Fe 3
55.845
FE (III) ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
FE
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
O
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
R
C
N
310
N
O
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
N
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
39
7943
7955
10.1021/bi000151e
10891075
Structure of Acinetobacter strain ADP1 protocatechuate 3, 4-dioxygenase at 2.2 A resolution: implications for the mechanism of an intradiol dioxygenase.
2000
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
236
372
373
10.1006/jmbi.1994.1142
Crystallization and Preliminary X-ray Analysis of Protocatechuate 3,4-dioxygenase from Acinetobacter calcoaceticus
1994
US
J.Bacteriol.
JOBAAY
0767
0021-9193
181
6478
6487
Substitution, Insertion, Deletion, Suppression, and Altered Substrate Specificity in Functional Protocatechuate 3,4-dioxygenases.
1999
US
Biochemistry
BICHAW
0033
0006-2960
36
10052
10066
10.1021/bi970469f
Crystal Structures of Substrate and Substrate Analog Complexes of Protocatechuate 3,4-dioxygenase: Endogenous Fe3+ Ligand Displacement in Response to Substrate binding.
1997
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
244
586
608
10.1006/jmbi.1994.1754
Structure of Protocatechuate 3,4-dioxygenase from Pseudomonas aeruginosa at 2.15 A resolution
1994
10.2210/pdb1eo2/pdb
pdb_00001eo2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
AREA DETECTOR
1999-01-01
SIEMENS HI-STAR
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
23508.100
PROTOCATECHUATE 3,4-DIOXYGENASE ALPHA CHAIN
1.13.11.3
1
man
polymer
27583.031
PROTOCATECHUATE 3,4-DIOXYGENASE BETA CHAIN
1.13.11.3
1
man
polymer
55.845
FE (III) ION
1
syn
non-polymer
18.015
water
183
nat
water
no
no
MNGWNFQELKETPSQTGGPYVHIGLLPKQANIEVFEHNLDNNLVQDNTQGQRIRLEGQVFDGLGLPLRDVLIEIWQADTN
GVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPGRKGSTQAPHISLIIFARGINIGLHTRVYFDDEAEA
NAKDPVLNSIEWATRRQTLVAKREERDGEVVYRFDIRIQGENETVFFDI
MNGWNFQELKETPSQTGGPYVHIGLLPKQANIEVFEHNLDNNLVQDNTQGQRIRLEGQVFDGLGLPLRDVLIEIWQADTN
GVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPGRKGSTQAPHISLIIFARGINIGLHTRVYFDDEAEA
NAKDPVLNSIEWATRRQTLVAKREERDGEVVYRFDIRIQGENETVFFDI
A
polypeptide(L)
no
no
MSQIIWGAYAQRNTEDHPPAYAPGYKTSVLRSPKNALISIAETLSEVTAPHFSADKFGPKDNDLILNYAKDGLPIGERVI
VHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWRNRINEWRPA
HIHFSLIADGWAQRLISQFYFEGDTLIDSCPILKTIPSEQQRRALIALEDKSNFIEADSRCYRFDITLRGRRATYFENDL
T
MSQIIWGAYAQRNTEDHPPAYAPGYKTSVLRSPKNALISIAETLSEVTAPHFSADKFGPKDNDLILNYAKDGLPIGERVI
VHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWRNRINEWRPA
HIHFSLIADGWAQRLISQFYFEGDTLIDSCPILKTIPSEQQRRALIALEDKSNFIEADSRCYRFDITLRGRRATYFENDL
T
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Acinetobacter
ADP1
Escherichia
sample
CLONED AND EXPRESSED IN E.COLI
62977
Acinetobacter sp.
562
Escherichia coli
Acinetobacter
ADP1
Escherichia
sample
62977
Acinetobacter sp.
562
Escherichia coli
1
2.51
51.01
VAPOR DIFFUSION, HANGING DROP
7.0
100mM Tris-HCl pH 7.5, 2.0 M ammonium sulfate, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
diffrn_source
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Source and taxonomy
Version format compliance
Refinement description
Data collection
Data collection
Database references
Derived calculations
1
0
2000-08-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2018-04-04
1
5
2024-02-07
_diffrn_source.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal structure of Acinetobacter sp. ADP1 Protocatechuate 3,4-dioxygenase at pH < 7.0
Crystal structure of Acinetobacter sp. ADP1 Protocatechuate 3,4-dioxygenase in complex with cyanide
Crystal structure of Acinetobacter sp. ADP1 Protocatechuate 3,4-dioxygenase in complex with 3,4-dihydroxybenzoate
Crystal structure of Acinetobacter sp. ADP1 Protocatechuate 3,4-dioxygenase in complex with 4-nitrocatechol
RCSB
Y
RCSB
2000-03-21
REL
REL
FE
FE (III) ION
HOH
water
Structure at pH 8.5 to 2.25 angstroms resolution
FE
600
3
FE
FE
600
B
HOH
701
4
HOH
HOH
701
A
HOH
702
4
HOH
HOH
702
A
HOH
704
4
HOH
HOH
704
A
HOH
709
4
HOH
HOH
709
A
HOH
710
4
HOH
HOH
710
A
HOH
711
4
HOH
HOH
711
A
HOH
712
4
HOH
HOH
712
A
HOH
713
4
HOH
HOH
713
A
HOH
714
4
HOH
HOH
714
A
HOH
717
4
HOH
HOH
717
A
HOH
720
4
HOH
HOH
720
A
HOH
724
4
HOH
HOH
724
A
HOH
725
4
HOH
HOH
725
A
HOH
726
4
HOH
HOH
726
A
HOH
730
4
HOH
HOH
730
A
HOH
736
4
HOH
HOH
736
A
HOH
737
4
HOH
HOH
737
A
HOH
738
4
HOH
HOH
738
A
HOH
739
4
HOH
HOH
739
A
HOH
741
4
HOH
HOH
741
A
HOH
745
4
HOH
HOH
745
A
HOH
748
4
HOH
HOH
748
A
HOH
750
4
HOH
HOH
750
A
HOH
751
4
HOH
HOH
751
A
HOH
757
4
HOH
HOH
757
A
HOH
762
4
HOH
HOH
762
A
HOH
763
4
HOH
HOH
763
A
HOH
765
4
HOH
HOH
765
A
HOH
770
4
HOH
HOH
770
A
HOH
776
4
HOH
HOH
776
A
HOH
779
4
HOH
HOH
779
A
HOH
781
4
HOH
HOH
781
A
HOH
784
4
HOH
HOH
784
A
HOH
785
4
HOH
HOH
785
A
HOH
786
4
HOH
HOH
786
A
HOH
787
4
HOH
HOH
787
A
HOH
789
4
HOH
HOH
789
A
HOH
794
4
HOH
HOH
794
A
HOH
795
4
HOH
HOH
795
A
HOH
796
4
HOH
HOH
796
A
HOH
800
4
HOH
HOH
800
A
HOH
804
4
HOH
HOH
804
A
HOH
812
4
HOH
HOH
812
A
HOH
816
4
HOH
HOH
816
A
HOH
818
4
HOH
HOH
818
A
HOH
819
4
HOH
HOH
819
A
HOH
824
4
HOH
HOH
824
A
HOH
828
4
HOH
HOH
828
A
HOH
833
4
HOH
HOH
833
A
HOH
834
4
HOH
HOH
834
A
HOH
835
4
HOH
HOH
835
A
HOH
836
4
HOH
HOH
836
A
HOH
839
4
HOH
HOH
839
A
HOH
850
4
HOH
HOH
850
A
HOH
851
4
HOH
HOH
851
A
HOH
857
4
HOH
HOH
857
A
HOH
859
4
HOH
HOH
859
A
HOH
860
4
HOH
HOH
860
A
HOH
861
4
HOH
HOH
861
A
HOH
862
4
HOH
HOH
862
A
HOH
864
4
HOH
HOH
864
A
HOH
865
4
HOH
HOH
865
A
HOH
867
4
HOH
HOH
867
A
HOH
868
4
HOH
HOH
868
A
HOH
870
4
HOH
HOH
870
A
HOH
875
4
HOH
HOH
875
A
HOH
700
4
HOH
HOH
700
B
HOH
703
4
HOH
HOH
703
B
HOH
705
4
HOH
HOH
705
B
HOH
706
4
HOH
HOH
706
B
HOH
707
4
HOH
HOH
707
B
HOH
708
4
HOH
HOH
708
B
HOH
715
4
HOH
HOH
715
B
HOH
716
4
HOH
HOH
716
B
HOH
718
4
HOH
HOH
718
B
HOH
719
4
HOH
HOH
719
B
HOH
721
4
HOH
HOH
721
B
HOH
722
4
HOH
HOH
722
B
HOH
723
4
HOH
HOH
723
B
HOH
727
4
HOH
HOH
727
B
HOH
728
4
HOH
HOH
728
B
HOH
729
4
HOH
HOH
729
B
HOH
731
4
HOH
HOH
731
B
HOH
732
4
HOH
HOH
732
B
HOH
733
4
HOH
HOH
733
B
HOH
734
4
HOH
HOH
734
B
HOH
735
4
HOH
HOH
735
B
HOH
740
4
HOH
HOH
740
B
HOH
742
4
HOH
HOH
742
B
HOH
743
4
HOH
HOH
743
B
HOH
744
4
HOH
HOH
744
B
HOH
746
4
HOH
HOH
746
B
HOH
747
4
HOH
HOH
747
B
HOH
749
4
HOH
HOH
749
B
HOH
752
4
HOH
HOH
752
B
HOH
753
4
HOH
HOH
753
B
HOH
754
4
HOH
HOH
754
B
HOH
755
4
HOH
HOH
755
B
HOH
756
4
HOH
HOH
756
B
HOH
758
4
HOH
HOH
758
B
HOH
759
4
HOH
HOH
759
B
HOH
760
4
HOH
HOH
760
B
HOH
761
4
HOH
HOH
761
B
HOH
764
4
HOH
HOH
764
B
HOH
766
4
HOH
HOH
766
B
HOH
767
4
HOH
HOH
767
B
HOH
768
4
HOH
HOH
768
B
HOH
769
4
HOH
HOH
769
B
HOH
771
4
HOH
HOH
771
B
HOH
772
4
HOH
HOH
772
B
HOH
773
4
HOH
HOH
773
B
HOH
774
4
HOH
HOH
774
B
HOH
775
4
HOH
HOH
775
B
HOH
777
4
HOH
HOH
777
B
HOH
778
4
HOH
HOH
778
B
HOH
780
4
HOH
HOH
780
B
HOH
782
4
HOH
HOH
782
B
HOH
783
4
HOH
HOH
783
B
HOH
788
4
HOH
HOH
788
B
HOH
790
4
HOH
HOH
790
B
HOH
791
4
HOH
HOH
791
B
HOH
792
4
HOH
HOH
792
B
HOH
793
4
HOH
HOH
793
B
HOH
797
4
HOH
HOH
797
B
HOH
798
4
HOH
HOH
798
B
HOH
799
4
HOH
HOH
799
B
HOH
801
4
HOH
HOH
801
B
HOH
802
4
HOH
HOH
802
B
HOH
803
4
HOH
HOH
803
B
HOH
805
4
HOH
HOH
805
B
HOH
806
4
HOH
HOH
806
B
HOH
807
4
HOH
HOH
807
B
HOH
808
4
HOH
HOH
808
B
HOH
809
4
HOH
HOH
809
B
HOH
810
4
HOH
HOH
810
B
HOH
811
4
HOH
HOH
811
B
HOH
813
4
HOH
HOH
813
B
HOH
814
4
HOH
HOH
814
B
HOH
815
4
HOH
HOH
815
B
HOH
817
4
HOH
HOH
817
B
HOH
820
4
HOH
HOH
820
B
HOH
821
4
HOH
HOH
821
B
HOH
822
4
HOH
HOH
822
B
HOH
823
4
HOH
HOH
823
B
HOH
825
4
HOH
HOH
825
B
HOH
826
4
HOH
HOH
826
B
HOH
827
4
HOH
HOH
827
B
HOH
829
4
HOH
HOH
829
B
HOH
830
4
HOH
HOH
830
B
HOH
831
4
HOH
HOH
831
B
HOH
832
4
HOH
HOH
832
B
HOH
837
4
HOH
HOH
837
B
HOH
838
4
HOH
HOH
838
B
HOH
840
4
HOH
HOH
840
B
HOH
841
4
HOH
HOH
841
B
HOH
842
4
HOH
HOH
842
B
HOH
843
4
HOH
HOH
843
B
HOH
844
4
HOH
HOH
844
B
HOH
845
4
HOH
HOH
845
B
HOH
846
4
HOH
HOH
846
B
HOH
847
4
HOH
HOH
847
B
HOH
848
4
HOH
HOH
848
B
HOH
849
4
HOH
HOH
849
B
HOH
852
4
HOH
HOH
852
B
HOH
853
4
HOH
HOH
853
B
HOH
854
4
HOH
HOH
854
B
HOH
855
4
HOH
HOH
855
B
HOH
856
4
HOH
HOH
856
B
HOH
858
4
HOH
HOH
858
B
HOH
863
4
HOH
HOH
863
B
HOH
866
4
HOH
HOH
866
B
HOH
869
4
HOH
HOH
869
B
HOH
871
4
HOH
HOH
871
B
HOH
872
4
HOH
HOH
872
B
HOH
873
4
HOH
HOH
873
B
HOH
874
4
HOH
HOH
874
B
HOH
876
4
HOH
HOH
876
B
HOH
877
4
HOH
HOH
877
B
HOH
878
4
HOH
HOH
878
B
HOH
879
4
HOH
HOH
879
B
HOH
880
4
HOH
HOH
880
B
HOH
881
4
HOH
HOH
881
B
HOH
882
4
HOH
HOH
882
B
n
1
-3
A
n
2
-2
A
n
3
-1
A
n
4
0
A
n
5
1
A
n
6
2
A
n
7
3
A
GLU
4
n
8
GLU
4
A
LEU
5
n
9
LEU
5
A
LYS
6
n
10
LYS
6
A
GLU
7
n
11
GLU
7
A
THR
8
n
12
THR
8
A
PRO
9
n
13
PRO
9
A
SER
10
n
14
SER
10
A
GLN
11
n
15
GLN
11
A
THR
12
n
16
THR
12
A
GLY
13
n
17
GLY
13
A
GLY
14
n
18
GLY
14
A
PRO
15
n
19
PRO
15
A
TYR
16
n
20
TYR
16
A
VAL
17
n
21
VAL
17
A
HIS
18
n
22
HIS
18
A
ILE
19
n
23
ILE
19
A
GLY
20
n
24
GLY
20
A
LEU
21
n
25
LEU
21
A
LEU
22
n
26
LEU
22
A
PRO
23
n
27
PRO
23
A
LYS
24
n
28
LYS
24
A
GLN
25
n
29
GLN
25
A
ALA
26
n
30
ALA
26
A
ASN
27
n
31
ASN
27
A
ILE
28
n
32
ILE
28
A
GLU
29
n
33
GLU
29
A
VAL
30
n
34
VAL
30
A
PHE
31
n
35
PHE
31
A
GLU
32
n
36
GLU
32
A
HIS
33
n
37
HIS
33
A
ASN
34
n
38
ASN
34
A
LEU
35
n
39
LEU
35
A
ASP
36
n
40
ASP
36
A
ASN
37
n
41
ASN
37
A
ASN
38
n
42
ASN
38
A
LEU
39
n
43
LEU
39
A
VAL
40
n
44
VAL
40
A
GLN
41
n
45
GLN
41
A
ASP
42
n
46
ASP
42
A
ASN
43
n
47
ASN
43
A
THR
44
n
48
THR
44
A
GLN
45
n
49
GLN
45
A
GLY
46
n
50
GLY
46
A
GLN
47
n
51
GLN
47
A
ARG
48
n
52
ARG
48
A
ILE
49
n
53
ILE
49
A
ARG
50
n
54
ARG
50
A
LEU
51
n
55
LEU
51
A
GLU
52
n
56
GLU
52
A
GLY
53
n
57
GLY
53
A
GLN
54
n
58
GLN
54
A
VAL
55
n
59
VAL
55
A
PHE
56
n
60
PHE
56
A
ASP
57
n
61
ASP
57
A
GLY
58
n
62
GLY
58
A
LEU
59
n
63
LEU
59
A
GLY
60
n
64
GLY
60
A
LEU
61
n
65
LEU
61
A
PRO
62
n
66
PRO
62
A
LEU
63
n
67
LEU
63
A
ARG
64
n
68
ARG
64
A
ASP
65
n
69
ASP
65
A
VAL
66
n
70
VAL
66
A
LEU
67
n
71
LEU
67
A
ILE
68
n
72
ILE
68
A
GLU
69
n
73
GLU
69
A
ILE
70
n
74
ILE
70
A
TRP
71
n
75
TRP
71
A
GLN
72
n
76
GLN
72
A
ALA
73
n
77
ALA
73
A
ASP
74
n
78
ASP
74
A
THR
75
n
79
THR
75
A
ASN
76
n
80
ASN
76
A
GLY
77
n
81
GLY
77
A
VAL
78
n
82
VAL
78
A
TYR
79
n
83
TYR
79
A
PRO
80
n
84
PRO
80
A
SER
81
n
85
SER
81
A
GLN
82
n
86
GLN
82
A
ALA
83
n
87
ALA
83
A
ASP
84
n
88
ASP
84
A
THR
85
n
89
THR
85
A
GLN
86
n
90
GLN
86
A
GLY
87
n
91
GLY
87
A
LYS
88
n
92
LYS
88
A
GLN
88
n
93
A
GLN
88
A
VAL
88
n
94
B
VAL
88
A
ASP
88
n
95
C
ASP
88
A
PRO
88
n
96
D
PRO
88
A
ASN
88
n
97
E
ASN
88
A
PHE
89
n
98
PHE
89
A
LEU
90
n
99
LEU
90
A
GLY
91
n
100
GLY
91
A
TRP
92
n
101
TRP
92
A
GLY
93
n
102
GLY
93
A
ARG
94
n
103
ARG
94
A
THR
95
n
104
THR
95
A
GLY
96
n
105
GLY
96
A
ALA
97
n
106
ALA
97
A
ASP
98
n
107
ASP
98
A
PHE
99
n
108
PHE
99
A
GLY
100
n
109
GLY
100
A
THR
101
n
110
THR
101
A
GLY
102
n
111
GLY
102
A
PHE
103
n
112
PHE
103
A
TRP
104
n
113
TRP
104
A
SER
105
n
114
SER
105
A
PHE
106
n
115
PHE
106
A
ASN
107
n
116
ASN
107
A
THR
108
n
117
THR
108
A
ILE
109
n
118
ILE
109
A
LYS
110
n
119
LYS
110
A
PRO
111
n
120
PRO
111
A
GLY
112
n
121
GLY
112
A
ALA
113
n
122
ALA
113
A
VAL
114
n
123
VAL
114
A
PRO
115
n
124
PRO
115
A
GLY
116
n
125
GLY
116
A
ARG
117
n
126
ARG
117
A
LYS
118
n
127
LYS
118
A
GLY
119
n
128
GLY
119
A
SER
120
n
129
SER
120
A
THR
121
n
130
THR
121
A
GLN
122
n
131
GLN
122
A
ALA
123
n
132
ALA
123
A
PRO
124
n
133
PRO
124
A
HIS
125
n
134
HIS
125
A
ILE
126
n
135
ILE
126
A
SER
127
n
136
SER
127
A
LEU
128
n
137
LEU
128
A
ILE
129
n
138
ILE
129
A
ILE
130
n
139
ILE
130
A
PHE
131
n
140
PHE
131
A
ALA
132
n
141
ALA
132
A
ARG
133
n
142
ARG
133
A
GLY
134
n
143
GLY
134
A
ILE
135
n
144
ILE
135
A
ASN
136
n
145
ASN
136
A
ILE
137
n
146
ILE
137
A
GLY
138
n
147
GLY
138
A
LEU
139
n
148
LEU
139
A
HIS
140
n
149
HIS
140
A
THR
141
n
150
THR
141
A
ARG
142
n
151
ARG
142
A
VAL
143
n
152
VAL
143
A
TYR
144
n
153
TYR
144
A
PHE
145
n
154
PHE
145
A
ASP
146
n
155
ASP
146
A
ASP
147
n
156
ASP
147
A
GLU
148
n
157
GLU
148
A
ALA
149
n
158
ALA
149
A
GLU
150
n
159
GLU
150
A
ALA
151
n
160
ALA
151
A
ASN
152
n
161
ASN
152
A
ALA
153
n
162
ALA
153
A
LYS
154
n
163
LYS
154
A
ASP
155
n
164
ASP
155
A
PRO
156
n
165
PRO
156
A
VAL
157
n
166
VAL
157
A
LEU
158
n
167
LEU
158
A
ASN
159
n
168
ASN
159
A
SER
160
n
169
SER
160
A
ILE
161
n
170
ILE
161
A
GLU
162
n
171
GLU
162
A
TRP
163
n
172
TRP
163
A
ALA
164
n
173
ALA
164
A
THR
165
n
174
THR
165
A
ARG
166
n
175
ARG
166
A
ARG
167
n
176
ARG
167
A
GLN
168
n
177
GLN
168
A
THR
169
n
178
THR
169
A
LEU
170
n
179
LEU
170
A
VAL
171
n
180
VAL
171
A
ALA
172
n
181
ALA
172
A
LYS
173
n
182
LYS
173
A
ARG
174
n
183
ARG
174
A
GLU
175
n
184
GLU
175
A
GLU
176
n
185
GLU
176
A
ARG
177
n
186
ARG
177
A
ASP
178
n
187
ASP
178
A
GLY
179
n
188
GLY
179
A
GLU
180
n
189
GLU
180
A
VAL
181
n
190
VAL
181
A
VAL
182
n
191
VAL
182
A
TYR
183
n
192
TYR
183
A
ARG
184
n
193
ARG
184
A
PHE
185
n
194
PHE
185
A
ASP
186
n
195
ASP
186
A
ILE
187
n
196
ILE
187
A
ARG
188
n
197
ARG
188
A
ILE
189
n
198
ILE
189
A
GLN
190
n
199
GLN
190
A
GLY
191
n
200
GLY
191
A
GLU
192
n
201
GLU
192
A
ASN
193
n
202
ASN
193
A
GLU
194
n
203
GLU
194
A
THR
195
n
204
THR
195
A
VAL
196
n
205
VAL
196
A
PHE
197
n
206
PHE
197
A
PHE
198
n
207
PHE
198
A
ASP
199
n
208
ASP
199
A
ILE
200
n
209
ILE
200
A
n
1
300
B
n
2
301
B
n
3
302
B
ILE
303
n
4
ILE
303
B
ILE
304
n
5
ILE
304
B
TRP
305
n
6
TRP
305
B
GLY
306
n
7
GLY
306
B
ALA
307
n
8
ALA
307
B
TYR
308
n
9
TYR
308
B
ALA
309
n
10
ALA
309
B
GLN
310
n
11
GLN
310
B
ARG
311
n
12
ARG
311
B
ASN
312
n
13
ASN
312
B
THR
313
n
14
THR
313
B
GLU
314
n
15
GLU
314
B
ASP
315
n
16
ASP
315
B
HIS
316
n
17
HIS
316
B
PRO
317
n
18
PRO
317
B
PRO
318
n
19
PRO
318
B
ALA
319
n
20
ALA
319
B
TYR
320
n
21
TYR
320
B
ALA
321
n
22
ALA
321
B
PRO
322
n
23
PRO
322
B
GLY
323
n
24
GLY
323
B
TYR
324
n
25
TYR
324
B
LYS
325
n
26
LYS
325
B
THR
326
n
27
THR
326
B
SER
327
n
28
SER
327
B
VAL
328
n
29
VAL
328
B
LEU
329
n
30
LEU
329
B
ARG
330
n
31
ARG
330
B
SER
331
n
32
SER
331
B
PRO
332
n
33
PRO
332
B
LYS
333
n
34
LYS
333
B
ASN
334
n
35
ASN
334
B
ALA
335
n
36
ALA
335
B
LEU
336
n
37
LEU
336
B
ILE
337
n
38
ILE
337
B
SER
338
n
39
SER
338
B
ILE
339
n
40
ILE
339
B
ALA
340
n
41
ALA
340
B
GLU
341
n
42
GLU
341
B
THR
342
n
43
THR
342
B
LEU
343
n
44
LEU
343
B
SER
344
n
45
SER
344
B
GLU
345
n
46
GLU
345
B
VAL
346
n
47
VAL
346
B
THR
347
n
48
THR
347
B
ALA
348
n
49
ALA
348
B
PRO
349
n
50
PRO
349
B
HIS
350
n
51
HIS
350
B
PHE
351
n
52
PHE
351
B
SER
352
n
53
SER
352
B
ALA
353
n
54
ALA
353
B
ASP
354
n
55
ASP
354
B
LYS
355
n
56
LYS
355
B
PHE
356
n
57
PHE
356
B
GLY
357
n
58
GLY
357
B
PRO
358
n
59
PRO
358
B
LYS
359
n
60
LYS
359
B
ASP
360
n
61
ASP
360
B
ASN
361
n
62
ASN
361
B
ASP
362
n
63
ASP
362
B
LEU
363
n
64
LEU
363
B
ILE
364
n
65
ILE
364
B
LEU
365
n
66
LEU
365
B
ASN
366
n
67
ASN
366
B
TYR
367
n
68
TYR
367
B
ALA
368
n
69
ALA
368
B
LYS
369
n
70
LYS
369
B
ASP
370
n
71
ASP
370
B
GLY
371
n
72
GLY
371
B
LEU
372
n
73
LEU
372
B
PRO
373
n
74
PRO
373
B
ILE
374
n
75
ILE
374
B
GLY
375
n
76
GLY
375
B
GLU
376
n
77
GLU
376
B
ARG
377
n
78
ARG
377
B
VAL
378
n
79
VAL
378
B
ILE
379
n
80
ILE
379
B
VAL
380
n
81
VAL
380
B
HIS
381
n
82
HIS
381
B
GLY
382
n
83
GLY
382
B
TYR
383
n
84
TYR
383
B
VAL
384
n
85
VAL
384
B
ARG
385
n
86
ARG
385
B
ASP
386
n
87
ASP
386
B
GLN
387
n
88
GLN
387
B
PHE
388
n
89
PHE
388
B
GLY
389
n
90
GLY
389
B
ARG
390
n
91
ARG
390
B
PRO
391
n
92
PRO
391
B
VAL
392
n
93
VAL
392
B
LYS
393
n
94
LYS
393
B
ASN
394
n
95
ASN
394
B
ALA
395
n
96
ALA
395
B
LEU
396
n
97
LEU
396
B
VAL
397
n
98
VAL
397
B
GLU
398
n
99
GLU
398
B
VAL
399
n
100
VAL
399
B
TRP
400
n
101
TRP
400
B
GLN
401
n
102
GLN
401
B
ALA
402
n
103
ALA
402
B
ASN
403
n
104
ASN
403
B
ALA
404
n
105
ALA
404
B
SER
405
n
106
SER
405
B
GLY
406
n
107
GLY
406
B
ARG
407
n
108
ARG
407
B
TYR
408
n
109
TYR
408
B
ARG
409
n
110
ARG
409
B
HIS
410
n
111
HIS
410
B
PRO
411
n
112
PRO
411
B
ASN
412
n
113
ASN
412
B
ASP
413
n
114
ASP
413
B
GLN
414
n
115
GLN
414
B
TYR
415
n
116
TYR
415
B
ILE
416
n
117
ILE
416
B
GLY
417
n
118
GLY
417
B
ALA
418
n
119
ALA
418
B
MET
419
n
120
MET
419
B
ASP
420
n
121
ASP
420
B
PRO
421
n
122
PRO
421
B
ASN
422
n
123
ASN
422
B
PHE
423
n
124
PHE
423
B
GLY
424
n
125
GLY
424
B
GLY
425
n
126
GLY
425
B
CYS
426
n
127
CYS
426
B
GLY
427
n
128
GLY
427
B
ARG
428
n
129
ARG
428
B
MET
429
n
130
MET
429
B
LEU
430
n
131
LEU
430
B
THR
431
n
132
THR
431
B
ASP
432
n
133
ASP
432
B
ASP
433
n
134
ASP
433
B
ASN
434
n
135
ASN
434
B
GLY
435
n
136
GLY
435
B
TYR
436
n
137
TYR
436
B
TYR
437
n
138
TYR
437
B
VAL
438
n
139
VAL
438
B
PHE
439
n
140
PHE
439
B
ARG
440
n
141
ARG
440
B
THR
441
n
142
THR
441
B
ILE
442
n
143
ILE
442
B
LYS
443
n
144
LYS
443
B
PRO
444
n
145
PRO
444
B
GLY
445
n
146
GLY
445
B
PRO
446
n
147
PRO
446
B
TYR
447
n
148
TYR
447
B
PRO
448
n
149
PRO
448
B
TRP
449
n
150
TRP
449
B
ARG
450
n
151
ARG
450
B
ASN
451
n
152
ASN
451
B
ARG
452
n
153
ARG
452
B
ILE
453
n
154
ILE
453
B
ASN
454
n
155
ASN
454
B
GLU
455
n
156
GLU
455
B
TRP
456
n
157
TRP
456
B
ARG
457
n
158
ARG
457
B
PRO
458
n
159
PRO
458
B
ALA
459
n
160
ALA
459
B
HIS
460
n
161
HIS
460
B
ILE
461
n
162
ILE
461
B
HIS
462
n
163
HIS
462
B
PHE
463
n
164
PHE
463
B
SER
464
n
165
SER
464
B
LEU
465
n
166
LEU
465
B
ILE
466
n
167
ILE
466
B
ALA
467
n
168
ALA
467
B
ASP
468
n
169
ASP
468
B
GLY
469
n
170
GLY
469
B
TRP
470
n
171
TRP
470
B
ALA
471
n
172
ALA
471
B
GLN
472
n
173
GLN
472
B
ARG
473
n
174
ARG
473
B
LEU
474
n
175
LEU
474
B
ILE
475
n
176
ILE
475
B
SER
476
n
177
SER
476
B
GLN
477
n
178
GLN
477
B
PHE
478
n
179
PHE
478
B
TYR
479
n
180
TYR
479
B
PHE
480
n
181
PHE
480
B
GLU
481
n
182
GLU
481
B
GLY
482
n
183
GLY
482
B
ASP
483
n
184
ASP
483
B
THR
484
n
185
THR
484
B
LEU
485
n
186
LEU
485
B
ILE
486
n
187
ILE
486
B
ASP
487
n
188
ASP
487
B
SER
488
n
189
SER
488
B
CYS
489
n
190
CYS
489
B
PRO
490
n
191
PRO
490
B
ILE
491
n
192
ILE
491
B
LEU
492
n
193
LEU
492
B
LYS
493
n
194
LYS
493
B
THR
494
n
195
THR
494
B
ILE
495
n
196
ILE
495
B
PRO
496
n
197
PRO
496
B
SER
497
n
198
SER
497
B
GLU
498
n
199
GLU
498
B
GLN
499
n
200
GLN
499
B
GLN
500
n
201
GLN
500
B
ARG
501
n
202
ARG
501
B
ARG
502
n
203
ARG
502
B
ALA
503
n
204
ALA
503
B
LEU
504
n
205
LEU
504
B
ILE
505
n
206
ILE
505
B
ALA
506
n
207
ALA
506
B
LEU
507
n
208
LEU
507
B
GLU
508
n
209
GLU
508
B
ASP
509
n
210
ASP
509
B
LYS
510
n
211
LYS
510
B
SER
511
n
212
SER
511
B
ASN
512
n
213
ASN
512
B
PHE
513
n
214
PHE
513
B
ILE
514
n
215
ILE
514
B
GLU
515
n
216
GLU
515
B
ALA
516
n
217
ALA
516
B
ASP
517
n
218
ASP
517
B
SER
518
n
219
SER
518
B
ARG
519
n
220
ARG
519
B
CYS
520
n
221
CYS
520
B
TYR
521
n
222
TYR
521
B
ARG
522
n
223
ARG
522
B
PHE
523
n
224
PHE
523
B
ASP
524
n
225
ASP
524
B
ILE
525
n
226
ILE
525
B
THR
526
n
227
THR
526
B
LEU
527
n
228
LEU
527
B
ARG
528
n
229
ARG
528
B
GLY
529
n
230
GLY
529
B
ARG
530
n
231
ARG
530
B
ARG
531
n
232
ARG
531
B
ALA
532
n
233
ALA
532
B
THR
533
n
234
THR
533
B
TYR
534
n
235
TYR
534
B
PHE
535
n
236
PHE
535
B
GLU
536
n
237
GLU
536
B
ASN
537
n
238
ASN
537
B
ASP
538
n
239
ASP
538
B
LEU
539
n
240
LEU
539
B
THR
540
n
241
THR
540
B
author_and_software_defined_assembly
PISA,PQS
24
24-meric
141130
-653
173540
B
TYR
408
B
OH
TYR
109
1_555
B
FE
600
C
FE
FE
1_555
B
TYR
447
B
OH
TYR
148
1_555
109.7
B
TYR
408
B
OH
TYR
109
1_555
B
FE
600
C
FE
FE
1_555
B
HIS
460
B
NE2
HIS
161
1_555
104.0
B
TYR
447
B
OH
TYR
148
1_555
B
FE
600
C
FE
FE
1_555
B
HIS
460
B
NE2
HIS
161
1_555
92.4
B
TYR
408
B
OH
TYR
109
1_555
B
FE
600
C
FE
FE
1_555
B
HIS
462
B
NE2
HIS
163
1_555
87.6
B
TYR
447
B
OH
TYR
148
1_555
B
FE
600
C
FE
FE
1_555
B
HIS
462
B
NE2
HIS
163
1_555
162.6
B
HIS
460
B
NE2
HIS
161
1_555
B
FE
600
C
FE
FE
1_555
B
HIS
462
B
NE2
HIS
163
1_555
83.4
B
TYR
408
B
OH
TYR
109
1_555
B
FE
600
C
FE
FE
1_555
B
HOH
700
E
O
HOH
1_555
112.5
B
TYR
447
B
OH
TYR
148
1_555
B
FE
600
C
FE
FE
1_555
B
HOH
700
E
O
HOH
1_555
87.3
B
HIS
460
B
NE2
HIS
161
1_555
B
FE
600
C
FE
FE
1_555
B
HOH
700
E
O
HOH
1_555
141.3
B
HIS
462
B
NE2
HIS
163
1_555
B
FE
600
C
FE
FE
1_555
B
HOH
700
E
O
HOH
1_555
85.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-x,-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_555
z,x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
6_555
z,-x,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
7_555
-z,-x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
8_555
-z,x,-y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_555
y,z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
10_555
-y,z,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
11_555
y,-z,-x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
12_555
-y,-z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
95
A
O
THR
104
A
N
ILE
68
A
N
ILE
72
A
O
TRP
71
A
O
TRP
75
A
N
SER
127
A
N
SER
136
A
O
ILE
130
A
O
ILE
139
A
N
LEU
139
A
N
LEU
148
A
O
TYR
144
A
O
TYR
153
A
N
ALA
172
A
N
ALA
181
A
O
ARG
177
A
O
ARG
186
A
N
GLU
180
A
N
GLU
189
A
N
TYR
183
A
N
TYR
192
A
O
ARG
50
A
O
ARG
54
A
O
GLY
53
A
O
GLY
57
A
N
TRP
104
A
N
TRP
113
A
N
PHE
56
A
N
PHE
60
A
O
ILE
187
A
O
ILE
196
A
O
VAL
114
A
O
VAL
123
A
N
GLN
122
A
N
GLN
131
A
N
ASP
199
A
N
ASP
208
B
O
ILE
337
B
O
ILE
38
B
N
GLY
306
B
N
GLY
7
B
O
ARG
531
B
O
ARG
232
B
O
THR
441
B
O
THR
142
B
N
VAL
378
B
N
VAL
79
B
N
ILE
379
B
N
ILE
80
B
O
ARG
519
B
O
ARG
220
B
N
ARG
522
B
N
ARG
223
B
O
LEU
507
B
O
LEU
208
B
N
ALA
506
B
N
ALA
207
B
O
TYR
479
B
O
TYR
180
B
N
PHE
478
B
N
PHE
179
B
O
ILE
461
B
O
ILE
162
B
O
ILE
466
B
O
ILE
167
B
N
LEU
396
B
N
LEU
97
B
N
VAL
399
B
N
VAL
100
B
O
GLY
427
B
O
GLY
128
B
O
THR
441
B
O
THR
142
B
N
VAL
378
B
N
VAL
79
B
O
TYR
383
B
O
TYR
84
B
N
ILE
525
B
N
ILE
226
B
N
TRP
449
B
N
TRP
150
B
O
GLU
455
B
O
GLU
156
1
B
HOH
766
E
HOH
1
A
MET
-3
A
MET
1
1
Y
1
A
ASN
-2
A
ASN
2
1
Y
1
A
GLY
-1
A
GLY
3
1
Y
1
A
TRP
0
A
TRP
4
1
Y
1
A
ASN
1
A
ASN
5
1
Y
1
A
PHE
2
A
PHE
6
1
Y
1
A
GLN
3
A
GLN
7
1
Y
1
B
MET
300
B
MET
1
1
Y
1
B
SER
301
B
SER
2
1
Y
1
B
GLN
302
B
GLN
3
1
Y
1
-17.29
2.70
111.00
93.71
B
B
B
N
CA
C
ASN
ASN
ASN
451
451
451
N
1
-16.26
2.70
111.00
94.74
B
B
B
N
CA
C
ARG
ARG
ARG
452
452
452
N
1
A
LEU
22
-146.29
55.56
1
A
ASP
74
-77.28
-168.32
1
A
ALA
132
176.13
165.45
1
A
ASP
178
77.13
-82.73
1
B
ASN
366
-64.99
0.08
1
B
LYS
369
-104.67
-72.43
1
B
ILE
453
-39.58
-37.94
1
B
ASN
454
-103.61
45.70
1
B
ALA
467
-113.09
-129.62
1
B
ASP
509
-113.02
73.14
1
B
ASP
517
-141.61
-76.93
1
B
PHE
535
-126.23
-130.66
0.2180000
0.1760000
0.1760000
0.1760000
2.25
20.0
1017
23933
20754
86.8
5% of data
1
0
0
Engh & Huber
2.25
20.0
183
3712
1
0
3528
1.48
0.0055
2.25
20
1EO2
150778
23393
1
0.0740000
1
8.96
6.3
98.6
0.3220000
2.25
2.32
1
3.2
92.3
refinement
CNS
data scaling
X-GEN
phasing
CNS
CRYSTAL STRUCTURE OF ACINETOBACTER SP. ADP1 PROTOCATECHUATE 3,4-DIOXYGENASE
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
The biological assembly is a dodecamer (AB) X 12 constructed from the 23(T) symmetry of the space group acting on the A and B subunits in the asymmetric unit.
A
TYR
16
A
TYR
20
HELX_P
A
LEU
21
A
LEU
25
1
1
6
A
LEU
22
A
LEU
26
HELX_P
A
ASN
27
A
ASN
31
5
2
6
A
GLU
148
A
GLU
157
HELX_P
A
LYS
154
A
LYS
163
1
3
7
A
ASP
155
A
ASP
164
HELX_P
A
ILE
161
A
ILE
170
1
4
7
A
TRP
163
A
TRP
172
HELX_P
A
GLN
168
A
GLN
177
1
5
6
B
ASN
312
B
ASN
13
HELX_P
B
HIS
316
B
HIS
17
5
6
5
B
TYR
324
B
TYR
25
HELX_P
B
LEU
329
B
LEU
30
5
7
6
B
THR
342
B
THR
43
HELX_P
B
THR
347
B
THR
48
1
8
6
B
SER
352
B
SER
53
HELX_P
B
PHE
356
B
PHE
57
5
9
5
B
GLY
469
B
GLY
170
HELX_P
B
ARG
473
B
ARG
174
5
10
5
B
ASP
483
B
ASP
184
HELX_P
B
CYS
489
B
CYS
190
5
11
7
B
ILE
491
B
ILE
192
HELX_P
B
ILE
495
B
ILE
196
5
12
5
B
SER
497
B
SER
198
HELX_P
B
ALA
503
B
ALA
204
1
13
7
B
LYS
510
B
LYS
211
HELX_P
B
PHE
513
B
PHE
214
5
14
4
metalc
1.883
B
TYR
408
B
OH
TYR
109
1_555
B
FE
600
C
FE
FE
1_555
metalc
2.048
B
TYR
447
B
OH
TYR
148
1_555
B
FE
600
C
FE
FE
1_555
metalc
2.236
B
HIS
460
B
NE2
HIS
161
1_555
B
FE
600
C
FE
FE
1_555
metalc
2.121
B
HIS
462
B
NE2
HIS
163
1_555
B
FE
600
C
FE
FE
1_555
metalc
1.928
B
FE
600
C
FE
FE
1_555
B
HOH
700
E
O
HOH
1_555
OXIDOREDUCTASE
beta-sandwich, mixed alpha/beta structure, dioxygenase, biodegradation, OXIDOREDUCTASE
PCXA_ACIAD
UNP
1
1
P20371
MNGWNFQELKETPSQTGGPYVHIGLLPKQANIEVFEHNLDNNLVQDNTQGQRIRLEGQVFDGLSLPLRDVLIEIWQADTN
GVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPGRKGSTQAPHISLIIFARGINIGLHTRVYFDDEAEA
NAKDPVLNSIEWATRRQTLVAKREERDGEVVYRFDIRIQGENETVFFDI
PCXB_ACIAD
UNP
2
1
P20372
MSQIIWGAYAQRNTEDHPPAYAPGYKTSVLRSPKNALISIAETLSEVTAPHFSADKFGPKDNDLILNYAKDGLPIGERVI
VHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPWRNRINEWRPA
HIHFSLIADGWAQRLISQFYFEGDTLIDSCPILKTIPSEQQRRALIALEDKSNFIEADSRCYRFDITLRGRRATYFENDL
T
1
209
1EO2
-3
200
P20371
A
1
1
209
1
241
1EO2
300
540
P20372
B
2
1
241
1
SER
SEE REMARK 999
GLY
60
1EO2
A
P20371
UNP
64
64
8
2
2
2
2
8
3
2
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
A
TRP
92
A
TRP
101
A
GLY
96
A
GLY
105
A
VAL
66
A
VAL
70
A
TRP
71
A
TRP
75
A
HIS
125
A
HIS
134
A
ALA
132
A
ALA
141
A
LEU
139
A
LEU
148
A
PHE
145
A
PHE
154
A
VAL
171
A
VAL
180
A
ARG
177
A
ARG
186
A
GLU
180
A
GLU
189
A
ARG
184
A
ARG
193
A
ARG
48
A
ARG
52
A
GLY
53
A
GLY
57
A
TRP
104
A
TRP
113
A
ILE
109
A
ILE
118
A
VAL
55
A
VAL
59
A
PHE
56
A
PHE
60
A
ILE
187
A
ILE
196
A
ARG
188
A
ARG
197
A
VAL
114
A
VAL
123
A
PRO
115
A
PRO
124
A
THR
121
A
THR
130
A
GLN
122
A
GLN
131
A
PHE
198
A
PHE
207
A
ASP
199
A
ASP
208
B
ILE
337
B
ILE
38
B
SER
338
B
SER
39
B
ILE
304
B
ILE
5
B
TYR
308
B
TYR
9
B
ARG
530
B
ARG
231
B
THR
533
B
THR
234
B
TYR
436
B
TYR
137
B
ILE
442
B
ILE
143
B
ARG
377
B
ARG
78
B
ASP
386
B
ASP
87
B
ARG
519
B
ARG
220
B
ARG
522
B
ARG
223
B
ILE
505
B
ILE
206
B
GLU
508
B
GLU
209
B
LEU
474
B
LEU
175
B
PHE
480
B
PHE
181
B
HIS
460
B
HIS
161
B
ILE
466
B
ILE
167
B
LEU
396
B
LEU
97
B
TRP
400
B
TRP
101
B
CYS
426
B
CYS
127
B
LEU
430
B
LEU
131
B
TYR
436
B
TYR
137
B
ILE
442
B
ILE
143
B
ARG
377
B
ARG
78
B
ASP
386
B
ASP
87
B
ILE
525
B
ILE
226
B
LEU
527
B
LEU
228
B
TYR
447
B
TYR
148
B
TRP
449
B
TRP
150
B
GLU
455
B
GLU
156
B
ARG
457
B
ARG
158
BINDING SITE FOR RESIDUE FE B 600
B
FE
600
Software
5
B
TYR
408
B
TYR
109
5
1_555
B
TYR
447
B
TYR
148
5
1_555
B
HIS
460
B
HIS
161
5
1_555
B
HIS
462
B
HIS
163
5
1_555
B
HOH
700
E
HOH
5
1_555
197
I 2 3