1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kingston, R.L.
Fitzon-Ostendorp, T.
Eisenmesser, E.Z.
Schatz, G.W.
Vogt, V.M.
Post, C.B.
Rossmann, M.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure Fold.Des.
FODEFH
1263
0969-2126
8
617
628
10.1016/S0969-2126(00)00148-9
10873863
Structure and self-association of the Rous sarcoma virus capsid protein.
2000
10.2210/pdb1eoq/pdb
pdb_00001eoq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
10435.036
GAG POLYPROTEIN CAPSID PROTEIN P27
C-TERMINAL DOMAIN
1
man
polymer
no
no
MDIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTAPLTD
QGIAAAMSSAIQPLIM
MDIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTAPLTD
QGIAAAMSSAIQPLIM
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Alpharetrovirus
Rous sarcoma virus
PRAGUE C
Escherichia
sample
11888
Rous sarcoma virus - Prague C
562
Escherichia coli
PET-3XC (NOVAGEN)
audit_author
pdbx_struct_assembly
pdbx_struct_oper_list
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Derived calculations
Structure summary
Database references
1
0
2000-08-02
1
1
2008-04-27
1
2
2011-07-13
1
3
2019-06-05
1
4
2022-12-21
_audit_author.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
ROUS SARCOMA VIRUS CAPSID PROTEIN: N-TERMINAL DOMAIN
RCSB
Y
RCSB
2000-03-23
REL
The structure was determined using triple-resonance NMR spectroscopy.
1
3D_13C-separated_NOESY
3D_15N-separated_NOESY
HNHA
HNHB
HNHA
50 mM NaCl
4.9
ambient
298
K
50 mM NaCl
4.9
ambient
298
K
50 mM NaCl
4.9
ambient
298
K
torsion angle dynamics/simulated annealing
U-15N RSV CA(155-249) (used for the 3D_15N-SEPARATED_NOESY, HNHA, HNHB expts) and U-15N/U-13C RSV CA(155-249) (used for the 3D_13C-SEPARATED_NOESY expt) both suspended in the same buffer (50 mM Sodium phosphate pH 4.9 50 mM NaCl 1 mM EDTA 1 mM DTT)
90% H20, 10%D20
U-15N RSV CA(155-249) 50 mM Sodium phosphate pH 4.9 50 mM NaCl 1 mM EDTA 1 mM DTT
90% H20, 10%D20
U-15N,13C RSV CA(155-249) 50 mM Sodium phosphate pH 4.9 50 mM NaCl 1 mM EDTA 1 mM DTT
90% H20, 10%D20
Delaglio, F.
processing
NMRPipe
1.6
Kraulis, P.
data analysis
ANSIG
3.3
BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,READ,RICE,SIMONSON,WARREN
refinement
CNS
1.0
600
Varian
UNITYPLUS
MET
154
n
1
MET
154
A
ASP
155
n
2
ASP
155
A
ILE
156
n
3
ILE
156
A
MET
157
n
4
MET
157
A
GLN
158
n
5
GLN
158
A
GLY
159
n
6
GLY
159
A
PRO
160
n
7
PRO
160
A
SER
161
n
8
SER
161
A
GLU
162
n
9
GLU
162
A
SER
163
n
10
SER
163
A
PHE
164
n
11
PHE
164
A
VAL
165
n
12
VAL
165
A
ASP
166
n
13
ASP
166
A
PHE
167
n
14
PHE
167
A
ALA
168
n
15
ALA
168
A
ASN
169
n
16
ASN
169
A
ARG
170
n
17
ARG
170
A
LEU
171
n
18
LEU
171
A
ILE
172
n
19
ILE
172
A
LYS
173
n
20
LYS
173
A
ALA
174
n
21
ALA
174
A
VAL
175
n
22
VAL
175
A
GLU
176
n
23
GLU
176
A
GLY
177
n
24
GLY
177
A
SER
178
n
25
SER
178
A
ASP
179
n
26
ASP
179
A
LEU
180
n
27
LEU
180
A
PRO
181
n
28
PRO
181
A
PRO
182
n
29
PRO
182
A
SER
183
n
30
SER
183
A
ALA
184
n
31
ALA
184
A
ARG
185
n
32
ARG
185
A
ALA
186
n
33
ALA
186
A
PRO
187
n
34
PRO
187
A
VAL
188
n
35
VAL
188
A
ILE
189
n
36
ILE
189
A
ILE
190
n
37
ILE
190
A
ASP
191
n
38
ASP
191
A
CYS
192
n
39
CYS
192
A
PHE
193
n
40
PHE
193
A
ARG
194
n
41
ARG
194
A
GLN
195
n
42
GLN
195
A
LYS
196
n
43
LYS
196
A
SER
197
n
44
SER
197
A
GLN
198
n
45
GLN
198
A
PRO
199
n
46
PRO
199
A
ASP
200
n
47
ASP
200
A
ILE
201
n
48
ILE
201
A
GLN
202
n
49
GLN
202
A
GLN
203
n
50
GLN
203
A
LEU
204
n
51
LEU
204
A
ILE
205
n
52
ILE
205
A
ARG
206
n
53
ARG
206
A
THR
207
n
54
THR
207
A
ALA
208
n
55
ALA
208
A
PRO
209
n
56
PRO
209
A
SER
210
n
57
SER
210
A
THR
211
n
58
THR
211
A
LEU
212
n
59
LEU
212
A
THR
213
n
60
THR
213
A
THR
214
n
61
THR
214
A
PRO
215
n
62
PRO
215
A
GLY
216
n
63
GLY
216
A
GLU
217
n
64
GLU
217
A
ILE
218
n
65
ILE
218
A
ILE
219
n
66
ILE
219
A
LYS
220
n
67
LYS
220
A
TYR
221
n
68
TYR
221
A
VAL
222
n
69
VAL
222
A
LEU
223
n
70
LEU
223
A
ASP
224
n
71
ASP
224
A
ARG
225
n
72
ARG
225
A
GLN
226
n
73
GLN
226
A
LYS
227
n
74
LYS
227
A
THR
228
n
75
THR
228
A
ALA
229
n
76
ALA
229
A
PRO
230
n
77
PRO
230
A
n
78
231
A
n
79
232
A
n
80
233
A
n
81
234
A
n
82
235
A
n
83
236
A
n
84
237
A
n
85
238
A
n
86
239
A
n
87
240
A
n
88
241
A
n
89
242
A
n
90
243
A
n
91
244
A
n
92
245
A
n
93
246
A
n
94
247
A
n
95
248
A
n
96
249
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
LEU
231
A
LEU
78
1
Y
1
A
THR
232
A
THR
79
1
Y
1
A
ASP
233
A
ASP
80
1
Y
1
A
GLN
234
A
GLN
81
1
Y
1
A
GLY
235
A
GLY
82
1
Y
1
A
ILE
236
A
ILE
83
1
Y
1
A
ALA
237
A
ALA
84
1
Y
1
A
ALA
238
A
ALA
85
1
Y
1
A
ALA
239
A
ALA
86
1
Y
1
A
MET
240
A
MET
87
1
Y
1
A
SER
241
A
SER
88
1
Y
1
A
SER
242
A
SER
89
1
Y
1
A
ALA
243
A
ALA
90
1
Y
1
A
ILE
244
A
ILE
91
1
Y
1
A
GLN
245
A
GLN
92
1
Y
1
A
PRO
246
A
PRO
93
1
Y
1
A
LEU
247
A
LEU
94
1
Y
1
A
ILE
248
A
ILE
95
1
Y
1
A
MET
249
A
MET
96
1
Y
1
A
A
O
H
ILE
VAL
218
222
1.59
1
A
PRO
209
-71.27
-160.97
1
A
SER
210
57.99
159.27
ROUS SARCOMA VIRUS CAPSID PROTEIN: C-TERMINAL DOMAIN
1
N
N
A
SER
163
A
SER
10
HELX_P
A
GLY
177
A
GLY
24
1
1
15
A
PRO
181
A
PRO
28
HELX_P
A
SER
197
A
SER
44
1
2
17
A
GLN
198
A
GLN
45
HELX_P
A
ALA
208
A
ALA
55
1
3
11
A
THR
214
A
THR
61
HELX_P
A
GLN
226
A
GLN
73
1
4
13
VIRAL PROTEIN
VIRUS/VIRAL PROTEIN, Viral protein
GAG_RSVP
UNP
1
393
P03322
ADIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDRQKTAPLTD
QGIAAAMSSAIQPLIM
394
488
1EOQ
155
249
P03322
A
1
2
96
1
initiating methionine
MET
154
1EOQ
A
P03322
UNP
1
1
P 1