0.029101 0.016802 0.000000 0.000000 0.033603 0.000000 0.000000 0.000000 0.005151 0.00000 0.00000 0.00000 Shu, W. Liu, J. Ji, H. Lu, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 34.363 34.363 194.135 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N O N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 S C N 102 N C N 103 N C N 104 N C N 105 N O N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N N N 120 S C N 121 N C N 122 N O N 123 N C N 124 N C N 125 N C N 126 N C N 127 N O N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N C N 148 N C N 149 N N N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N S N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N N N 187 S C N 188 N C N 189 N O N 190 N C N 191 N O N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 S C N 202 N C N 203 N O N 204 R C N 205 N O N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C Y 222 N C Y 223 N C Y 224 N C Y 225 N C Y 226 N C Y 227 N C N 228 N O N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N doub N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N doub N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing Y 216 N doub Y 217 N sing Y 218 N sing N 219 N sing Y 220 N doub N 221 N sing Y 222 N doub N 223 N sing Y 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 299 1101 1112 10.1006/jmbi.2000.3776 10843861 Core structure of the outer membrane lipoprotein from Escherichia coli at 1.9 A resolution. 2000 10.2210/pdb1eq7/pdb pdb_00001eq7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110.0 1 IMAGE PLATE 1999-03-19 RIGAKU RAXIS IV SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 6161.724 OUTER MEMBRANE LIPOPROTEIN PROTEIN MOIETY 1 man polymer 18.015 water 61 nat water no no SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli PLASMID PLPP-56 1 1.79 31.28 VAPOR DIFFUSION, HANGING DROP 4.6 PEG 4000, ammonium sulfate, sodium acetate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K 293.0 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references 1 0 2000-06-28 1 1 2008-04-27 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2000-04-03 REL HOH water HOH 101 2 HOH HOH 101 A HOH 102 2 HOH HOH 102 A HOH 103 2 HOH HOH 103 A HOH 104 2 HOH HOH 104 A HOH 105 2 HOH HOH 105 A HOH 106 2 HOH HOH 106 A HOH 107 2 HOH HOH 107 A HOH 108 2 HOH HOH 108 A HOH 109 2 HOH HOH 109 A HOH 110 2 HOH HOH 110 A HOH 111 2 HOH HOH 111 A HOH 112 2 HOH HOH 112 A HOH 113 2 HOH HOH 113 A HOH 114 2 HOH HOH 114 A HOH 115 2 HOH HOH 115 A HOH 116 2 HOH HOH 116 A HOH 117 2 HOH HOH 117 A HOH 118 2 HOH HOH 118 A HOH 119 2 HOH HOH 119 A HOH 120 2 HOH HOH 120 A HOH 121 2 HOH HOH 121 A HOH 122 2 HOH HOH 122 A HOH 123 2 HOH HOH 123 A HOH 124 2 HOH HOH 124 A HOH 125 2 HOH HOH 125 A HOH 126 2 HOH HOH 126 A HOH 127 2 HOH HOH 127 A HOH 128 2 HOH HOH 128 A HOH 129 2 HOH HOH 129 A HOH 130 2 HOH HOH 130 A HOH 131 2 HOH HOH 131 A HOH 132 2 HOH HOH 132 A HOH 133 2 HOH HOH 133 A HOH 134 2 HOH HOH 134 A HOH 135 2 HOH HOH 135 A HOH 136 2 HOH HOH 136 A HOH 137 2 HOH HOH 137 A HOH 138 2 HOH HOH 138 A HOH 139 2 HOH HOH 139 A HOH 140 2 HOH HOH 140 A HOH 141 2 HOH HOH 141 A HOH 142 2 HOH HOH 142 A HOH 143 2 HOH HOH 143 A HOH 144 2 HOH HOH 144 A HOH 145 2 HOH HOH 145 A HOH 146 2 HOH HOH 146 A HOH 147 2 HOH HOH 147 A HOH 148 2 HOH HOH 148 A HOH 149 2 HOH HOH 149 A HOH 150 2 HOH HOH 150 A HOH 151 2 HOH HOH 151 A HOH 152 2 HOH HOH 152 A HOH 153 2 HOH HOH 153 A HOH 154 2 HOH HOH 154 A HOH 155 2 HOH HOH 155 A HOH 156 2 HOH HOH 156 A HOH 157 2 HOH HOH 157 A HOH 158 2 HOH HOH 158 A HOH 159 2 HOH HOH 159 A HOH 160 2 HOH HOH 160 A HOH 161 2 HOH HOH 161 A SER 1 n 1 SER 1 A SER 2 n 2 SER 2 A ASN 3 n 3 ASN 3 A ALA 4 n 4 ALA 4 A LYS 5 n 5 LYS 5 A ILE 6 n 6 ILE 6 A ASP 7 n 7 ASP 7 A GLN 8 n 8 GLN 8 A LEU 9 n 9 LEU 9 A SER 10 n 10 SER 10 A SER 11 n 11 SER 11 A ASP 12 n 12 ASP 12 A VAL 13 n 13 VAL 13 A GLN 14 n 14 GLN 14 A THR 15 n 15 THR 15 A LEU 16 n 16 LEU 16 A ASN 17 n 17 ASN 17 A ALA 18 n 18 ALA 18 A LYS 19 n 19 LYS 19 A VAL 20 n 20 VAL 20 A ASP 21 n 21 ASP 21 A GLN 22 n 22 GLN 22 A LEU 23 n 23 LEU 23 A SER 24 n 24 SER 24 A ASN 25 n 25 ASN 25 A ASP 26 n 26 ASP 26 A VAL 27 n 27 VAL 27 A ASN 28 n 28 ASN 28 A ALA 29 n 29 ALA 29 A MET 30 n 30 MET 30 A ARG 31 n 31 ARG 31 A SER 32 n 32 SER 32 A ASP 33 n 33 ASP 33 A VAL 34 n 34 VAL 34 A GLN 35 n 35 GLN 35 A ALA 36 n 36 ALA 36 A ALA 37 n 37 ALA 37 A LYS 38 n 38 LYS 38 A ASP 39 n 39 ASP 39 A ASP 40 n 40 ASP 40 A ALA 41 n 41 ALA 41 A ALA 42 n 42 ALA 42 A ARG 43 n 43 ARG 43 A ALA 44 n 44 ALA 44 A ASN 45 n 45 ASN 45 A GLN 46 n 46 GLN 46 A ARG 47 n 47 ARG 47 A LEU 48 n 48 LEU 48 A ASP 49 n 49 ASP 49 A ASN 50 n 50 ASN 50 A MET 51 n 51 MET 51 A ALA 52 n 52 ALA 52 A THR 53 n 53 THR 53 A LYS 54 n 54 LYS 54 A TYR 55 n 55 TYR 55 A ARG 56 n 56 ARG 56 A author_and_software_defined_assembly PISA,PQS 3 trimeric 5980 -58 9050 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -y+1,x-y,z crystal symmetry operation 34.3630000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_665 -x+y+1,-x+1,z crystal symmetry operation 17.1815000000 29.7592309502 0.0000000000 1 A CD GLN 8 A CD GLN 8 1 Y 1 A OE1 GLN 8 A OE1 GLN 8 1 Y 1 A NE2 GLN 8 A NE2 GLN 8 1 Y 1 A CD LYS 19 A CD LYS 19 1 Y 1 A CE LYS 19 A CE LYS 19 1 Y 1 A NZ LYS 19 A NZ LYS 19 1 Y 1 A CD LYS 38 A CD LYS 38 1 Y 1 A CE LYS 38 A CE LYS 38 1 Y 1 A NZ LYS 38 A NZ LYS 38 1 Y 1 A CB THR 53 A CB THR 53 1 Y 1 A OG1 THR 53 A OG1 THR 53 1 Y 1 A CG2 THR 53 A CG2 THR 53 1 Y 1 A CD LYS 54 A CD LYS 54 1 Y 1 A CE LYS 54 A CE LYS 54 1 Y 1 A NZ LYS 54 A NZ LYS 54 1 Y 1 A CG ARG 56 A CG ARG 56 1 Y 1 A CD ARG 56 A CD ARG 56 1 Y 1 A NE ARG 56 A NE ARG 56 1 Y 1 A CZ ARG 56 A CZ ARG 56 1 Y 1 A NH1 ARG 56 A NH1 ARG 56 1 Y 1 A NH2 ARG 56 A NH2 ARG 56 1 Y PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP 26.2 -0.57 0.15 0.00 -0.57 0.00 1.15 0.2690000 0.011 0.2140000 0.2140000 1.90 15.00 567 3749 3749 15.1 99.8 RANDOM 1 RESTRAINED THROUGHOUT 0.0 0.0 Engh & Huber FLAT MODEL 82.36 0.444 0.31 0.23 5.00 0.28 0.18 1.90 15.00 61 469 0 0 408 0.006 0.8 17.9 0.61 0.80 1.50 1.22 2.00 1.56 2.00 2.24 2.50 0.3230000 0.033 0.2690000 2.02 94 511 6 15.5 99.2 25.1 1.9 15.0 1EQ7 3749 3749 0.0 0.0 0.0550000 1 99.8 phasing AMoRE refinement CNS 0.5 data reduction DENZO data scaling SCALEPACK CORE STRUCTURE OF THE OUTER MEMBRANE LIPOPROTEIN FROM ESCHERICHIA COLI AT 1.9 ANGSTROM RESOLUTION 1 N N 2 N N The biological assembly is a trimer constructed from chain A and its two symmetry partners generated by the three-fold. A ASN 3 A ASN 3 HELX_P A THR 53 A THR 53 1 1 51 MEMBRANE PROTEIN lipoprotein, outer membrane, protein folding, helix capping, MEMBRANE PROTEIN LPP_ECOLI UNP 1 P69776 22 77 1EQ7 1 56 P69776 A 1 1 56 155 H 3 2