0.012634 0.007294 0.000000 0.000000 0.014589 0.000000 0.000000 0.000000 0.015033 0.00000 0.00000 0.00000 Lukacs, C.M. Aggarwal, A.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 79.150 79.150 66.520 C2 H4 O2 60.052 ACETIC ACID non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 8 126 130 10.1038/84111 11175900 Structure of free BglII reveals an unprecedented scissor-like motion for opening an endonuclease. 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2000-03-01 BRANDEIS - B4 MAD M x-ray 1 0.9793 1.0 0.9789 1.0 0.9689 1.0 X25 NSLS 0.9793, 0.9789, 0.9689 SYNCHROTRON NSLS BEAMLINE X25 26031.756 RESTRICTION ENDONUCLEASE BGLII 3.1.21.4 1 man polymer 60.052 ACETIC ACID 1 syn non-polymer 18.015 water 81 nat water no yes (MSE)KIDITDYNHADEILNPQLWKEIEETLLK(MSE)PLHVKASDQASKVGSLIFDPVGTNQYIKDELVPKHWKNNIPI PKRFDFLGTDIDFGKRDTLVEVQFSNYPFLLNNTVRSELFHKSN(MSE)DIDEEG(MSE)KVAIIITKGH(MSE)FPASN SSLYYEQAQNQLNSLAEYNVFDVPIRLVGLIEDFETDIDIVSTTYADKRYSRTITKRDTVKGKVIDTNTPNTRRRKRGTI VTY MKIDITDYNHADEILNPQLWKEIEETLLKMPLHVKASDQASKVGSLIFDPVGTNQYIKDELVPKHWKNNIPIPKRFDFLG TDIDFGKRDTLVEVQFSNYPFLLNNTVRSELFHKSNMDIDEEGMKVAIIITKGHMFPASNSSLYYEQAQNQLNSLAEYNV FDVPIRLVGLIEDFETDIDIVSTTYADKRYSRTITKRDTVKGKVIDTNTPNTRRRKRGTIVTY A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample 1423 Bacillus subtilis 562 Escherichia coli 1 2.31 46.75 VAPOR DIFFUSION, HANGING DROP 6.0 30% isopropanol, 0.2 M sodium acetate, 0.1 M Bis-tris, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 repository Initial release Version format compliance Version format compliance Source and taxonomy 1 0 2001-01-17 1 1 2008-04-27 1 2 2011-07-13 1 3 2012-05-09 BglII complexed to DNA, 1.5 A BglII complexed to DNA, 1.7 A RCSB Y RCSB 2000-04-07 REL ACY ACETIC ACID HOH water ACE 600 2 ACY ACY 600 A WAT 501 3 HOH HOH 501 A WAT 502 3 HOH HOH 502 A WAT 503 3 HOH HOH 503 A WAT 504 3 HOH HOH 504 A WAT 505 3 HOH HOH 505 A WAT 506 3 HOH HOH 506 A WAT 507 3 HOH HOH 507 A WAT 508 3 HOH HOH 508 A WAT 509 3 HOH HOH 509 A WAT 510 3 HOH HOH 510 A WAT 511 3 HOH HOH 511 A WAT 512 3 HOH HOH 512 A WAT 513 3 HOH HOH 513 A WAT 514 3 HOH HOH 514 A WAT 515 3 HOH HOH 515 A WAT 516 3 HOH HOH 516 A WAT 517 3 HOH HOH 517 A WAT 518 3 HOH HOH 518 A WAT 519 3 HOH HOH 519 A WAT 520 3 HOH HOH 520 A WAT 521 3 HOH HOH 521 A WAT 522 3 HOH HOH 522 A WAT 523 3 HOH HOH 523 A WAT 524 3 HOH HOH 524 A WAT 525 3 HOH HOH 525 A WAT 526 3 HOH HOH 526 A WAT 527 3 HOH HOH 527 A WAT 528 3 HOH HOH 528 A WAT 529 3 HOH HOH 529 A WAT 530 3 HOH HOH 530 A WAT 531 3 HOH HOH 531 A WAT 532 3 HOH HOH 532 A WAT 533 3 HOH HOH 533 A WAT 534 3 HOH HOH 534 A WAT 535 3 HOH HOH 535 A WAT 536 3 HOH HOH 536 A WAT 537 3 HOH HOH 537 A WAT 538 3 HOH HOH 538 A WAT 539 3 HOH HOH 539 A WAT 540 3 HOH HOH 540 A WAT 541 3 HOH HOH 541 A WAT 542 3 HOH HOH 542 A WAT 543 3 HOH HOH 543 A WAT 544 3 HOH HOH 544 A WAT 545 3 HOH HOH 545 A WAT 546 3 HOH HOH 546 A WAT 547 3 HOH HOH 547 A WAT 548 3 HOH HOH 548 A WAT 549 3 HOH HOH 549 A WAT 550 3 HOH HOH 550 A WAT 551 3 HOH HOH 551 A WAT 552 3 HOH HOH 552 A WAT 553 3 HOH HOH 553 A WAT 554 3 HOH HOH 554 A WAT 555 3 HOH HOH 555 A WAT 556 3 HOH HOH 556 A WAT 557 3 HOH HOH 557 A WAT 558 3 HOH HOH 558 A WAT 559 3 HOH HOH 559 A WAT 560 3 HOH HOH 560 A WAT 561 3 HOH HOH 561 A WAT 562 3 HOH HOH 562 A WAT 563 3 HOH HOH 563 A WAT 564 3 HOH HOH 564 A WAT 565 3 HOH HOH 565 A WAT 566 3 HOH HOH 566 A WAT 567 3 HOH HOH 567 A WAT 568 3 HOH HOH 568 A WAT 569 3 HOH HOH 569 A WAT 570 3 HOH HOH 570 A WAT 571 3 HOH HOH 571 A WAT 572 3 HOH HOH 572 A WAT 573 3 HOH HOH 573 A WAT 574 3 HOH HOH 574 A WAT 575 3 HOH HOH 575 A WAT 576 3 HOH HOH 576 A WAT 577 3 HOH HOH 577 A WAT 578 3 HOH HOH 578 A WAT 579 3 HOH HOH 579 A WAT 580 3 HOH HOH 580 A WAT 581 3 HOH HOH 581 A MSE 1 n 1 MSE 1 A LYS 2 n 2 LYS 2 A ILE 3 n 3 ILE 3 A ASP 4 n 4 ASP 4 A ILE 5 n 5 ILE 5 A THR 6 n 6 THR 6 A ASP 7 n 7 ASP 7 A TYR 8 n 8 TYR 8 A ASN 9 n 9 ASN 9 A HIS 10 n 10 HIS 10 A ALA 11 n 11 ALA 11 A ASP 12 n 12 ASP 12 A GLU 13 n 13 GLU 13 A ILE 14 n 14 ILE 14 A LEU 15 n 15 LEU 15 A ASN 16 n 16 ASN 16 A PRO 17 n 17 PRO 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A TRP 20 n 20 TRP 20 A LYS 21 n 21 LYS 21 A GLU 22 n 22 GLU 22 A ILE 23 n 23 ILE 23 A GLU 24 n 24 GLU 24 A GLU 25 n 25 GLU 25 A THR 26 n 26 THR 26 A LEU 27 n 27 LEU 27 A LEU 28 n 28 LEU 28 A LYS 29 n 29 LYS 29 A MSE 30 n 30 MSE 30 A PRO 31 n 31 PRO 31 A LEU 32 n 32 LEU 32 A HIS 33 n 33 HIS 33 A VAL 34 n 34 VAL 34 A LYS 35 n 35 LYS 35 A ALA 36 n 36 ALA 36 A SER 37 n 37 SER 37 A n 38 38 A n 39 39 A n 40 40 A n 41 41 A n 42 42 A n 43 43 A n 44 44 A SER 45 n 45 SER 45 A LEU 46 n 46 LEU 46 A ILE 47 n 47 ILE 47 A PHE 48 n 48 PHE 48 A ASP 49 n 49 ASP 49 A PRO 50 n 50 PRO 50 A VAL 51 n 51 VAL 51 A GLY 52 n 52 GLY 52 A THR 53 n 53 THR 53 A ASN 54 n 54 ASN 54 A GLN 55 n 55 GLN 55 A TYR 56 n 56 TYR 56 A ILE 57 n 57 ILE 57 A LYS 58 n 58 LYS 58 A ASP 59 n 59 ASP 59 A GLU 60 n 60 GLU 60 A LEU 61 n 61 LEU 61 A VAL 62 n 62 VAL 62 A PRO 63 n 63 PRO 63 A LYS 64 n 64 LYS 64 A HIS 65 n 65 HIS 65 A TRP 66 n 66 TRP 66 A LYS 67 n 67 LYS 67 A ASN 68 n 68 ASN 68 A ASN 69 n 69 ASN 69 A ILE 70 n 70 ILE 70 A PRO 71 n 71 PRO 71 A ILE 72 n 72 ILE 72 A PRO 73 n 73 PRO 73 A LYS 74 n 74 LYS 74 A ARG 75 n 75 ARG 75 A PHE 76 n 76 PHE 76 A ASP 77 n 77 ASP 77 A PHE 78 n 78 PHE 78 A LEU 79 n 79 LEU 79 A GLY 80 n 80 GLY 80 A THR 81 n 81 THR 81 A ASP 82 n 82 ASP 82 A ILE 83 n 83 ILE 83 A ASP 84 n 84 ASP 84 A PHE 85 n 85 PHE 85 A GLY 86 n 86 GLY 86 A LYS 87 n 87 LYS 87 A ARG 88 n 88 ARG 88 A ASP 89 n 89 ASP 89 A THR 90 n 90 THR 90 A LEU 91 n 91 LEU 91 A VAL 92 n 92 VAL 92 A GLU 93 n 93 GLU 93 A VAL 94 n 94 VAL 94 A GLN 95 n 95 GLN 95 A PHE 96 n 96 PHE 96 A SER 97 n 97 SER 97 A ASN 98 n 98 ASN 98 A TYR 99 n 99 TYR 99 A PRO 100 n 100 PRO 100 A PHE 101 n 101 PHE 101 A LEU 102 n 102 LEU 102 A LEU 103 n 103 LEU 103 A ASN 104 n 104 ASN 104 A ASN 105 n 105 ASN 105 A THR 106 n 106 THR 106 A VAL 107 n 107 VAL 107 A ARG 108 n 108 ARG 108 A SER 109 n 109 SER 109 A GLU 110 n 110 GLU 110 A LEU 111 n 111 LEU 111 A PHE 112 n 112 PHE 112 A HIS 113 n 113 HIS 113 A LYS 114 n 114 LYS 114 A n 115 115 A n 116 116 A n 117 117 A n 118 118 A n 119 119 A n 120 120 A n 121 121 A n 122 122 A GLY 123 n 123 GLY 123 A MET 124 n 124 MSE 124 A LYS 125 n 125 LYS 125 A VAL 126 n 126 VAL 126 A ALA 127 n 127 ALA 127 A ILE 128 n 128 ILE 128 A ILE 129 n 129 ILE 129 A ILE 130 n 130 ILE 130 A THR 131 n 131 THR 131 A LYS 132 n 132 LYS 132 A GLY 133 n 133 GLY 133 A HIS 134 n 134 HIS 134 A MSE 135 n 135 MSE 135 A PHE 136 n 136 PHE 136 A PRO 137 n 137 PRO 137 A ALA 138 n 138 ALA 138 A SER 139 n 139 SER 139 A ASN 140 n 140 ASN 140 A SER 141 n 141 SER 141 A SER 142 n 142 SER 142 A LEU 143 n 143 LEU 143 A TYR 144 n 144 TYR 144 A TYR 145 n 145 TYR 145 A GLU 146 n 146 GLU 146 A GLN 147 n 147 GLN 147 A ALA 148 n 148 ALA 148 A GLN 149 n 149 GLN 149 A ASN 150 n 150 ASN 150 A GLN 151 n 151 GLN 151 A LEU 152 n 152 LEU 152 A ASN 153 n 153 ASN 153 A SER 154 n 154 SER 154 A LEU 155 n 155 LEU 155 A ALA 156 n 156 ALA 156 A GLU 157 n 157 GLU 157 A TYR 158 n 158 TYR 158 A ASN 159 n 159 ASN 159 A VAL 160 n 160 VAL 160 A PHE 161 n 161 PHE 161 A ASP 162 n 162 ASP 162 A VAL 163 n 163 VAL 163 A PRO 164 n 164 PRO 164 A ILE 165 n 165 ILE 165 A ARG 166 n 166 ARG 166 A LEU 167 n 167 LEU 167 A VAL 168 n 168 VAL 168 A GLY 169 n 169 GLY 169 A LEU 170 n 170 LEU 170 A ILE 171 n 171 ILE 171 A GLU 172 n 172 GLU 172 A ASP 173 n 173 ASP 173 A PHE 174 n 174 PHE 174 A GLU 175 n 175 GLU 175 A THR 176 n 176 THR 176 A ASP 177 n 177 ASP 177 A ILE 178 n 178 ILE 178 A ASP 179 n 179 ASP 179 A ILE 180 n 180 ILE 180 A VAL 181 n 181 VAL 181 A SER 182 n 182 SER 182 A THR 183 n 183 THR 183 A THR 184 n 184 THR 184 A TYR 185 n 185 TYR 185 A ALA 186 n 186 ALA 186 A ASP 187 n 187 ASP 187 A LYS 188 n 188 LYS 188 A n 189 189 A TYR 190 n 190 TYR 190 A SER 191 n 191 SER 191 A ARG 192 n 192 ARG 192 A THR 193 n 193 THR 193 A ILE 194 n 194 ILE 194 A THR 195 n 195 THR 195 A LYS 196 n 196 LYS 196 A ARG 197 n 197 ARG 197 A ASP 198 n 198 ASP 198 A THR 199 n 199 THR 199 A VAL 200 n 200 VAL 200 A LYS 201 n 201 LYS 201 A GLY 202 n 202 GLY 202 A LYS 203 n 203 LYS 203 A VAL 204 n 204 VAL 204 A ILE 205 n 205 ILE 205 A ASP 206 n 206 ASP 206 A n 207 207 A n 208 208 A n 209 209 A n 210 210 A n 211 211 A n 212 212 A n 213 213 A n 214 214 A n 215 215 A n 216 216 A ARG 217 n 217 ARG 217 A GLY 218 n 218 GLY 218 A THR 219 n 219 THR 219 A ILE 220 n 220 ILE 220 A VAL 221 n 221 VAL 221 A THR 222 n 222 THR 222 A TYR 223 n 223 TYR 223 A author_defined_assembly 2 dimeric A MSE 1 SELENOMETHIONINE A MSE 1 MET A MSE 30 SELENOMETHIONINE A MSE 30 MET A MSE 124 SELENOMETHIONINE A MSE 124 MET A MSE 135 SELENOMETHIONINE A MSE 135 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_764 -x+2,-x+y+1,-z-1/3 crystal symmetry operation 118.7250000000 68.5459107095 -22.1733333333 A N TYR 8 A N TYR 8 A O ILE 165 A O ILE 165 A N ARG 166 A N ARG 166 A O ALA 127 A O ALA 127 A N ILE 128 A N ILE 128 A O LEU 91 A O LEU 91 A N VAL 94 A N VAL 94 A O ILE 83 A O ILE 83 A O GLY 86 A O GLY 86 A N LYS 67 A N LYS 67 A N ILE 47 A N ILE 47 A O LYS 35 A O LYS 35 A N LEU 32 A N LEU 32 A O ASP 179 A O ASP 179 A N ALA 186 A N ALA 186 A O THR 193 A O THR 193 A N ILE 205 A N ILE 205 A O THR 219 A O THR 219 1 A CB LYS 114 A CB LYS 114 1 Y 1 A CG LYS 114 A CG LYS 114 1 Y 1 A CD LYS 114 A CD LYS 114 1 Y 1 A CE LYS 114 A CE LYS 114 1 Y 1 A NZ LYS 114 A NZ LYS 114 1 Y 1 A N TYR 190 A N TYR 190 1 Y 1 A CA TYR 190 A CA TYR 190 1 Y 1 A CB TYR 190 A CB TYR 190 1 Y 1 A CG TYR 190 A CG TYR 190 1 Y 1 A CD1 TYR 190 A CD1 TYR 190 1 Y 1 A CD2 TYR 190 A CD2 TYR 190 1 Y 1 A CE1 TYR 190 A CE1 TYR 190 1 Y 1 A CE2 TYR 190 A CE2 TYR 190 1 Y 1 A CZ TYR 190 A CZ TYR 190 1 Y 1 A OH TYR 190 A OH TYR 190 1 Y 1 A ASP 38 A ASP 38 1 Y 1 A GLN 39 A GLN 39 1 Y 1 A ALA 40 A ALA 40 1 Y 1 A SER 41 A SER 41 1 Y 1 A LYS 42 A LYS 42 1 Y 1 A VAL 43 A VAL 43 1 Y 1 A GLY 44 A GLY 44 1 Y 1 A SER 115 A SER 115 1 Y 1 A ASN 116 A ASN 116 1 Y 1 A MSE 117 A MSE 117 1 Y 1 A ASP 118 A ASP 118 1 Y 1 A ILE 119 A ILE 119 1 Y 1 A ASP 120 A ASP 120 1 Y 1 A GLU 121 A GLU 121 1 Y 1 A GLU 122 A GLU 122 1 Y 1 A ARG 189 A ARG 189 1 Y 1 A THR 207 A THR 207 1 Y 1 A ASN 208 A ASN 208 1 Y 1 A THR 209 A THR 209 1 Y 1 A PRO 210 A PRO 210 1 Y 1 A ASN 211 A ASN 211 1 Y 1 A THR 212 A THR 212 1 Y 1 A ARG 213 A ARG 213 1 Y 1 A ARG 214 A ARG 214 1 Y 1 A ARG 215 A ARG 215 1 Y 1 A LYS 216 A LYS 216 1 Y 1 A A NH2 NE2 ARG GLN 88 149 2.19 1_555 3_665 1 A ARG 88 55.44 -114.02 0.2580000 0.2140000 2.3 20.0 555 10963 10963 5.0 99.6 Random 1 THROUGHOUT 0 0 MAD Engh & Huber 2.3 20.0 81 1677 4 0 1592 0.007 1.27 36.6 2.3 40.0 1ES8 10979 10979 -2 0.0630000 1 14.4 3.1 99.4 0.1520000 2.30 2.38 1083 1 2.9 99.1 phasing SHARP refinement CNS data reduction DENZO data scaling SCALEPACK RESTRICTION ENDONUCLEASE BGLII (E.C.3.1.21.4) Crystal structure of free BglII 1 N N 2 N N 3 N N A HIS 10 A HIS 10 HELX_P A LEU 15 A LEU 15 1 1 6 A ASN 16 A ASN 16 HELX_P A MSE 30 A MSE 30 1 2 15 A ASP 49 A ASP 49 HELX_P A VAL 62 A VAL 62 1 3 14 A PRO 63 A PRO 63 HELX_P A HIS 65 A HIS 65 5 4 3 A ARG 75 A ARG 75 HELX_P A LEU 79 A LEU 79 5 5 5 A PRO 100 A PRO 100 HELX_P A HIS 113 A HIS 113 1 6 14 A TYR 144 A TYR 144 HELX_P A TYR 158 A TYR 158 1 7 15 covale 1.328 A MSE 1 A C MSE 1 1_555 A LYS 2 A N LYS 2 1_555 covale 1.327 A LYS 29 A C LYS 29 1_555 A MSE 30 A N MSE 30 1_555 covale 1.344 A MSE 30 A C MSE 30 1_555 A PRO 31 A N PRO 31 1_555 covale 1.329 A GLY 123 A C GLY 123 1_555 A MSE 124 A N MSE 124 1_555 covale 1.326 A MSE 124 A C MSE 124 1_555 A LYS 125 A N LYS 125 1_555 covale 1.330 A HIS 134 A C HIS 134 1_555 A MSE 135 A N MSE 135 1_555 covale 1.328 A MSE 135 A C MSE 135 1_555 A PHE 136 A N PHE 136 1_555 HYDROLASE RESTRICTION ENDONUCLEASE, RESTRICTION ENZYME, uncomplexed, HYDROLASE T2B2_BACSU UNP 1 Q45488 1 223 1ES8 1 223 Q45488 A 1 1 223 6 5 anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A LYS 2 A LYS 2 A TYR 8 A TYR 8 A ILE 165 A ILE 165 A ILE 171 A ILE 171 A VAL 126 A VAL 126 A LYS 132 A LYS 132 A THR 90 A THR 90 A GLN 95 A GLN 95 A ASP 82 A ASP 82 A LYS 87 A LYS 87 A LYS 67 A LYS 67 A ASN 69 A ASN 69 A LEU 46 A LEU 46 A PHE 48 A PHE 48 A LEU 32 A LEU 32 A ALA 36 A ALA 36 A ILE 178 A ILE 178 A ASP 187 A ASP 187 A ARG 192 A ARG 192 A ILE 205 A ILE 205 A THR 219 A THR 219 A THR 222 A THR 222 BINDING SITE FOR RESIDUE ACY A 600 Software 5 A ASP 82 A ASP 82 5 1_555 A GLN 95 A GLN 95 5 1_555 A SER 97 A SER 97 5 1_555 A TYR 99 A TYR 99 5 1_555 A ASN 104 A ASN 104 5 1_555 154 P 32 2 1