0.018139 0.000000 0.000000 0.000000 0.016308 0.000000 0.000000 0.000000 0.015528 0.00000 0.00000 0.00000 Xiao, G. Tordova, M. Jagadeesh, J. Drohat, A.C. Stivers, J.T. Gilliland, G.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 55.130 61.320 64.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Proteins PSFGEY 0867 0887-3585 35 13 24 10.1002/(SICI)1097-0134(19990401)35:1<13::AID-PROT2>3.3.CO;2-U 10090282 Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited. 1999 10.2210/pdb1eug/pdb pdb_00001eug 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 AREA DETECTOR 1997-08-15 BRUKER GRAPHITE CRYSTAL SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE BRUKER 25706.135 PROTEIN (GLYCOSYLASE) 3.2.2.3 1 man polymer 18.015 water 300 nat water UDG, UNG no no MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVR PGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMPVLPAESE MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVR PGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDWMPVLPAESE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia coli B Escherichia sample SIGMA CHEMICAL UNG 37762 Escherichia coli 562 Escherichia coli 1 2.05 39.9 8.5 PROTEIN CONCENTRATION 14.9 MG/ML, 0.2 M SODIUM ACETATE, 30% PEG4000, 0.1 M TRIS BUFFER, PH 8.5 USING HANGING DROP AT 293K. software struct_ref_seq_dif chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif repository Initial release Version format compliance Source and taxonomy Version format compliance Refinement description Database references Data collection Database references Refinement description 1 0 1999-10-12 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2018-03-14 1 5 2023-08-09 _struct_ref_seq_dif.details _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details BNL Y RCSB 1998-10-12 REL REL HOH water 1UDG PDB ENTRY 1UDG PDB experimental model HOH 301 2 HOH HOH 301 A HOH 302 2 HOH HOH 302 A HOH 303 2 HOH HOH 303 A HOH 304 2 HOH HOH 304 A HOH 305 2 HOH HOH 305 A HOH 306 2 HOH HOH 306 A HOH 307 2 HOH HOH 307 A HOH 308 2 HOH HOH 308 A HOH 309 2 HOH HOH 309 A HOH 310 2 HOH HOH 310 A HOH 311 2 HOH HOH 311 A HOH 312 2 HOH HOH 312 A HOH 313 2 HOH HOH 313 A HOH 314 2 HOH HOH 314 A HOH 315 2 HOH HOH 315 A HOH 316 2 HOH HOH 316 A HOH 317 2 HOH HOH 317 A HOH 318 2 HOH HOH 318 A HOH 319 2 HOH HOH 319 A HOH 320 2 HOH HOH 320 A HOH 321 2 HOH HOH 321 A HOH 322 2 HOH HOH 322 A HOH 323 2 HOH HOH 323 A HOH 324 2 HOH HOH 324 A HOH 325 2 HOH HOH 325 A HOH 326 2 HOH HOH 326 A HOH 327 2 HOH HOH 327 A HOH 328 2 HOH HOH 328 A HOH 329 2 HOH HOH 329 A HOH 330 2 HOH HOH 330 A HOH 331 2 HOH HOH 331 A HOH 332 2 HOH HOH 332 A HOH 333 2 HOH HOH 333 A HOH 334 2 HOH HOH 334 A HOH 335 2 HOH HOH 335 A HOH 336 2 HOH HOH 336 A HOH 337 2 HOH HOH 337 A HOH 338 2 HOH HOH 338 A HOH 339 2 HOH HOH 339 A HOH 340 2 HOH HOH 340 A HOH 341 2 HOH HOH 341 A HOH 342 2 HOH HOH 342 A HOH 343 2 HOH HOH 343 A HOH 344 2 HOH HOH 344 A HOH 345 2 HOH HOH 345 A HOH 346 2 HOH HOH 346 A HOH 347 2 HOH HOH 347 A HOH 348 2 HOH HOH 348 A HOH 349 2 HOH HOH 349 A HOH 350 2 HOH HOH 350 A HOH 351 2 HOH HOH 351 A HOH 352 2 HOH HOH 352 A HOH 353 2 HOH HOH 353 A HOH 354 2 HOH HOH 354 A HOH 355 2 HOH HOH 355 A HOH 356 2 HOH HOH 356 A HOH 357 2 HOH HOH 357 A HOH 358 2 HOH HOH 358 A HOH 359 2 HOH HOH 359 A HOH 360 2 HOH HOH 360 A HOH 361 2 HOH HOH 361 A HOH 362 2 HOH HOH 362 A HOH 363 2 HOH HOH 363 A HOH 364 2 HOH HOH 364 A HOH 365 2 HOH HOH 365 A HOH 366 2 HOH HOH 366 A HOH 367 2 HOH HOH 367 A HOH 368 2 HOH HOH 368 A HOH 369 2 HOH HOH 369 A HOH 370 2 HOH HOH 370 A HOH 371 2 HOH HOH 371 A HOH 372 2 HOH HOH 372 A HOH 373 2 HOH HOH 373 A HOH 374 2 HOH HOH 374 A HOH 375 2 HOH HOH 375 A HOH 376 2 HOH HOH 376 A HOH 377 2 HOH HOH 377 A HOH 378 2 HOH HOH 378 A HOH 379 2 HOH HOH 379 A HOH 380 2 HOH HOH 380 A HOH 381 2 HOH HOH 381 A HOH 382 2 HOH HOH 382 A HOH 383 2 HOH HOH 383 A HOH 384 2 HOH HOH 384 A HOH 385 2 HOH HOH 385 A HOH 386 2 HOH HOH 386 A HOH 387 2 HOH HOH 387 A HOH 388 2 HOH HOH 388 A HOH 389 2 HOH HOH 389 A HOH 390 2 HOH HOH 390 A HOH 391 2 HOH HOH 391 A HOH 392 2 HOH HOH 392 A HOH 393 2 HOH HOH 393 A HOH 394 2 HOH HOH 394 A HOH 395 2 HOH HOH 395 A HOH 396 2 HOH HOH 396 A HOH 397 2 HOH HOH 397 A HOH 398 2 HOH HOH 398 A HOH 399 2 HOH HOH 399 A HOH 400 2 HOH HOH 400 A HOH 401 2 HOH HOH 401 A HOH 402 2 HOH HOH 402 A HOH 403 2 HOH HOH 403 A HOH 404 2 HOH HOH 404 A HOH 405 2 HOH HOH 405 A HOH 406 2 HOH HOH 406 A HOH 407 2 HOH HOH 407 A HOH 408 2 HOH HOH 408 A HOH 409 2 HOH HOH 409 A HOH 410 2 HOH HOH 410 A HOH 411 2 HOH HOH 411 A HOH 412 2 HOH HOH 412 A HOH 413 2 HOH HOH 413 A HOH 414 2 HOH HOH 414 A HOH 415 2 HOH HOH 415 A HOH 416 2 HOH HOH 416 A HOH 417 2 HOH HOH 417 A HOH 418 2 HOH HOH 418 A HOH 419 2 HOH HOH 419 A HOH 420 2 HOH HOH 420 A HOH 421 2 HOH HOH 421 A HOH 422 2 HOH HOH 422 A HOH 423 2 HOH HOH 423 A HOH 424 2 HOH HOH 424 A HOH 425 2 HOH HOH 425 A HOH 426 2 HOH HOH 426 A HOH 427 2 HOH HOH 427 A HOH 428 2 HOH HOH 428 A HOH 429 2 HOH HOH 429 A HOH 430 2 HOH HOH 430 A HOH 431 2 HOH HOH 431 A HOH 432 2 HOH HOH 432 A HOH 433 2 HOH HOH 433 A HOH 434 2 HOH HOH 434 A HOH 435 2 HOH HOH 435 A HOH 436 2 HOH HOH 436 A HOH 437 2 HOH HOH 437 A HOH 438 2 HOH HOH 438 A HOH 439 2 HOH HOH 439 A HOH 440 2 HOH HOH 440 A HOH 441 2 HOH HOH 441 A HOH 442 2 HOH HOH 442 A HOH 443 2 HOH HOH 443 A HOH 444 2 HOH HOH 444 A HOH 445 2 HOH HOH 445 A HOH 446 2 HOH HOH 446 A HOH 447 2 HOH HOH 447 A HOH 448 2 HOH HOH 448 A HOH 449 2 HOH HOH 449 A HOH 450 2 HOH HOH 450 A HOH 451 2 HOH HOH 451 A HOH 452 2 HOH HOH 452 A HOH 453 2 HOH HOH 453 A HOH 454 2 HOH HOH 454 A HOH 455 2 HOH HOH 455 A HOH 456 2 HOH HOH 456 A HOH 457 2 HOH HOH 457 A HOH 458 2 HOH HOH 458 A HOH 459 2 HOH HOH 459 A HOH 460 2 HOH HOH 460 A HOH 461 2 HOH HOH 461 A HOH 462 2 HOH HOH 462 A HOH 463 2 HOH HOH 463 A HOH 464 2 HOH HOH 464 A HOH 465 2 HOH HOH 465 A HOH 466 2 HOH HOH 466 A HOH 467 2 HOH HOH 467 A HOH 468 2 HOH HOH 468 A HOH 469 2 HOH HOH 469 A HOH 470 2 HOH HOH 470 A HOH 471 2 HOH HOH 471 A HOH 472 2 HOH HOH 472 A HOH 473 2 HOH HOH 473 A HOH 474 2 HOH HOH 474 A HOH 475 2 HOH HOH 475 A HOH 476 2 HOH HOH 476 A HOH 477 2 HOH HOH 477 A HOH 478 2 HOH HOH 478 A HOH 479 2 HOH HOH 479 A HOH 480 2 HOH HOH 480 A HOH 481 2 HOH HOH 481 A HOH 482 2 HOH HOH 482 A HOH 483 2 HOH HOH 483 A HOH 484 2 HOH HOH 484 A HOH 485 2 HOH HOH 485 A HOH 486 2 HOH HOH 486 A HOH 487 2 HOH HOH 487 A HOH 488 2 HOH HOH 488 A HOH 489 2 HOH HOH 489 A HOH 490 2 HOH HOH 490 A HOH 491 2 HOH HOH 491 A HOH 492 2 HOH HOH 492 A HOH 493 2 HOH HOH 493 A HOH 494 2 HOH HOH 494 A HOH 495 2 HOH HOH 495 A HOH 496 2 HOH HOH 496 A HOH 497 2 HOH HOH 497 A HOH 498 2 HOH HOH 498 A HOH 499 2 HOH HOH 499 A HOH 500 2 HOH HOH 500 A HOH 501 2 HOH HOH 501 A HOH 502 2 HOH HOH 502 A HOH 503 2 HOH HOH 503 A HOH 504 2 HOH HOH 504 A HOH 505 2 HOH HOH 505 A HOH 506 2 HOH HOH 506 A HOH 507 2 HOH HOH 507 A HOH 508 2 HOH HOH 508 A HOH 509 2 HOH HOH 509 A HOH 510 2 HOH HOH 510 A HOH 511 2 HOH HOH 511 A HOH 512 2 HOH HOH 512 A HOH 513 2 HOH HOH 513 A HOH 514 2 HOH HOH 514 A HOH 515 2 HOH HOH 515 A HOH 516 2 HOH HOH 516 A HOH 517 2 HOH HOH 517 A HOH 518 2 HOH HOH 518 A HOH 519 2 HOH HOH 519 A HOH 520 2 HOH HOH 520 A HOH 521 2 HOH HOH 521 A HOH 522 2 HOH HOH 522 A HOH 523 2 HOH HOH 523 A HOH 524 2 HOH HOH 524 A HOH 525 2 HOH HOH 525 A HOH 526 2 HOH HOH 526 A HOH 527 2 HOH HOH 527 A HOH 528 2 HOH HOH 528 A HOH 529 2 HOH HOH 529 A HOH 530 2 HOH HOH 530 A HOH 531 2 HOH HOH 531 A HOH 532 2 HOH HOH 532 A HOH 533 2 HOH HOH 533 A HOH 534 2 HOH HOH 534 A HOH 535 2 HOH HOH 535 A HOH 536 2 HOH HOH 536 A HOH 537 2 HOH HOH 537 A HOH 538 2 HOH HOH 538 A HOH 539 2 HOH HOH 539 A HOH 540 2 HOH HOH 540 A HOH 541 2 HOH HOH 541 A HOH 542 2 HOH HOH 542 A HOH 543 2 HOH HOH 543 A HOH 544 2 HOH HOH 544 A HOH 545 2 HOH HOH 545 A HOH 546 2 HOH HOH 546 A HOH 547 2 HOH HOH 547 A HOH 548 2 HOH HOH 548 A HOH 549 2 HOH HOH 549 A HOH 550 2 HOH HOH 550 A HOH 551 2 HOH HOH 551 A HOH 552 2 HOH HOH 552 A HOH 553 2 HOH HOH 553 A HOH 554 2 HOH HOH 554 A HOH 555 2 HOH HOH 555 A HOH 556 2 HOH HOH 556 A HOH 557 2 HOH HOH 557 A HOH 558 2 HOH HOH 558 A HOH 559 2 HOH HOH 559 A HOH 560 2 HOH HOH 560 A HOH 561 2 HOH HOH 561 A HOH 562 2 HOH HOH 562 A HOH 563 2 HOH HOH 563 A HOH 564 2 HOH HOH 564 A HOH 565 2 HOH HOH 565 A HOH 566 2 HOH HOH 566 A HOH 567 2 HOH HOH 567 A HOH 568 2 HOH HOH 568 A HOH 569 2 HOH HOH 569 A HOH 570 2 HOH HOH 570 A HOH 571 2 HOH HOH 571 A HOH 572 2 HOH HOH 572 A HOH 573 2 HOH HOH 573 A HOH 574 2 HOH HOH 574 A HOH 575 2 HOH HOH 575 A HOH 576 2 HOH HOH 576 A HOH 577 2 HOH HOH 577 A HOH 578 2 HOH HOH 578 A HOH 579 2 HOH HOH 579 A HOH 580 2 HOH HOH 580 A HOH 581 2 HOH HOH 581 A HOH 582 2 HOH HOH 582 A HOH 583 2 HOH HOH 583 A HOH 584 2 HOH HOH 584 A HOH 585 2 HOH HOH 585 A HOH 586 2 HOH HOH 586 A HOH 587 2 HOH HOH 587 A HOH 588 2 HOH HOH 588 A HOH 589 2 HOH HOH 589 A HOH 590 2 HOH HOH 590 A HOH 591 2 HOH HOH 591 A HOH 592 2 HOH HOH 592 A HOH 593 2 HOH HOH 593 A HOH 594 2 HOH HOH 594 A HOH 595 2 HOH HOH 595 A HOH 596 2 HOH HOH 596 A HOH 597 2 HOH HOH 597 A HOH 598 2 HOH HOH 598 A HOH 599 2 HOH HOH 599 A HOH 600 2 HOH HOH 600 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A LEU 5 n 5 LEU 5 A THR 6 n 6 THR 6 A TRP 7 n 7 TRP 7 A HIS 8 n 8 HIS 8 A ASP 9 n 9 ASP 9 A VAL 10 n 10 VAL 10 A LEU 11 n 11 LEU 11 A ALA 12 n 12 ALA 12 A GLU 13 n 13 GLU 13 A GLU 14 n 14 GLU 14 A LYS 15 n 15 LYS 15 A GLN 16 n 16 GLN 16 A GLN 17 n 17 GLN 17 A PRO 18 n 18 PRO 18 A TYR 19 n 19 TYR 19 A PHE 20 n 20 PHE 20 A LEU 21 n 21 LEU 21 A ASN 22 n 22 ASN 22 A THR 23 n 23 THR 23 A LEU 24 n 24 LEU 24 A GLN 25 n 25 GLN 25 A THR 26 n 26 THR 26 A VAL 27 n 27 VAL 27 A ALA 28 n 28 ALA 28 A SER 29 n 29 SER 29 A GLU 30 n 30 GLU 30 A ARG 31 n 31 ARG 31 A GLN 32 n 32 GLN 32 A SER 33 n 33 SER 33 A GLY 34 n 34 GLY 34 A VAL 35 n 35 VAL 35 A THR 36 n 36 THR 36 A ILE 37 n 37 ILE 37 A TYR 38 n 38 TYR 38 A PRO 39 n 39 PRO 39 A PRO 40 n 40 PRO 40 A GLN 41 n 41 GLN 41 A LYS 42 n 42 LYS 42 A ASP 43 n 43 ASP 43 A VAL 44 n 44 VAL 44 A PHE 45 n 45 PHE 45 A ASN 46 n 46 ASN 46 A ALA 47 n 47 ALA 47 A PHE 48 n 48 PHE 48 A ARG 49 n 49 ARG 49 A PHE 50 n 50 PHE 50 A THR 51 n 51 THR 51 A GLU 52 n 52 GLU 52 A LEU 53 n 53 LEU 53 A GLY 54 n 54 GLY 54 A ASP 55 n 55 ASP 55 A VAL 56 n 56 VAL 56 A LYS 57 n 57 LYS 57 A VAL 58 n 58 VAL 58 A VAL 59 n 59 VAL 59 A ILE 60 n 60 ILE 60 A LEU 61 n 61 LEU 61 A GLY 62 n 62 GLY 62 A GLN 63 n 63 GLN 63 A ASP 64 n 64 ASP 64 A PRO 65 n 65 PRO 65 A TYR 66 n 66 TYR 66 A HIS 67 n 67 HIS 67 A GLY 68 n 68 GLY 68 A PRO 69 n 69 PRO 69 A GLY 70 n 70 GLY 70 A GLN 71 n 71 GLN 71 A ALA 72 n 72 ALA 72 A HIS 73 n 73 HIS 73 A GLY 74 n 74 GLY 74 A LEU 75 n 75 LEU 75 A ALA 76 n 76 ALA 76 A PHE 77 n 77 PHE 77 A SER 78 n 78 SER 78 A VAL 79 n 79 VAL 79 A ARG 80 n 80 ARG 80 A PRO 81 n 81 PRO 81 A GLY 82 n 82 GLY 82 A ILE 83 n 83 ILE 83 A ALA 84 n 84 ALA 84 A ILE 85 n 85 ILE 85 A PRO 86 n 86 PRO 86 A PRO 87 n 87 PRO 87 A SER 88 n 88 SER 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A ASN 91 n 91 ASN 91 A MET 92 n 92 MET 92 A TYR 93 n 93 TYR 93 A LYS 94 n 94 LYS 94 A GLU 95 n 95 GLU 95 A LEU 96 n 96 LEU 96 A GLU 97 n 97 GLU 97 A ASN 98 n 98 ASN 98 A THR 99 n 99 THR 99 A ILE 100 n 100 ILE 100 A PRO 101 n 101 PRO 101 A GLY 102 n 102 GLY 102 A PHE 103 n 103 PHE 103 A THR 104 n 104 THR 104 A ARG 105 n 105 ARG 105 A PRO 106 n 106 PRO 106 A ASN 107 n 107 ASN 107 A HIS 108 n 108 HIS 108 A GLY 109 n 109 GLY 109 A TYR 110 n 110 TYR 110 A LEU 111 n 111 LEU 111 A GLU 112 n 112 GLU 112 A SER 113 n 113 SER 113 A TRP 114 n 114 TRP 114 A ALA 115 n 115 ALA 115 A ARG 116 n 116 ARG 116 A GLN 117 n 117 GLN 117 A GLY 118 n 118 GLY 118 A VAL 119 n 119 VAL 119 A LEU 120 n 120 LEU 120 A LEU 121 n 121 LEU 121 A LEU 122 n 122 LEU 122 A ASN 123 n 123 ASN 123 A THR 124 n 124 THR 124 A VAL 125 n 125 VAL 125 A LEU 126 n 126 LEU 126 A THR 127 n 127 THR 127 A VAL 128 n 128 VAL 128 A ARG 129 n 129 ARG 129 A ALA 130 n 130 ALA 130 A GLY 131 n 131 GLY 131 A GLN 132 n 132 GLN 132 A ALA 133 n 133 ALA 133 A HIS 134 n 134 HIS 134 A SER 135 n 135 SER 135 A HIS 136 n 136 HIS 136 A ALA 137 n 137 ALA 137 A SER 138 n 138 SER 138 A LEU 139 n 139 LEU 139 A GLY 140 n 140 GLY 140 A TRP 141 n 141 TRP 141 A GLU 142 n 142 GLU 142 A THR 143 n 143 THR 143 A PHE 144 n 144 PHE 144 A THR 145 n 145 THR 145 A ASP 146 n 146 ASP 146 A LYS 147 n 147 LYS 147 A VAL 148 n 148 VAL 148 A ILE 149 n 149 ILE 149 A SER 150 n 150 SER 150 A LEU 151 n 151 LEU 151 A ILE 152 n 152 ILE 152 A ASN 153 n 153 ASN 153 A GLN 154 n 154 GLN 154 A HIS 155 n 155 HIS 155 A ARG 156 n 156 ARG 156 A GLU 157 n 157 GLU 157 A GLY 158 n 158 GLY 158 A VAL 159 n 159 VAL 159 A VAL 160 n 160 VAL 160 A PHE 161 n 161 PHE 161 A LEU 162 n 162 LEU 162 A LEU 163 n 163 LEU 163 A TRP 164 n 164 TRP 164 A GLY 165 n 165 GLY 165 A SER 166 n 166 SER 166 A HIS 167 n 167 HIS 167 A ALA 168 n 168 ALA 168 A GLN 169 n 169 GLN 169 A LYS 170 n 170 LYS 170 A LYS 171 n 171 LYS 171 A GLY 172 n 172 GLY 172 A ALA 173 n 173 ALA 173 A ILE 174 n 174 ILE 174 A ILE 175 n 175 ILE 175 A ASP 176 n 176 ASP 176 A LYS 177 n 177 LYS 177 A GLN 178 n 178 GLN 178 A ARG 179 n 179 ARG 179 A HIS 180 n 180 HIS 180 A HIS 181 n 181 HIS 181 A VAL 182 n 182 VAL 182 A LEU 183 n 183 LEU 183 A LYS 184 n 184 LYS 184 A ALA 185 n 185 ALA 185 A PRO 186 n 186 PRO 186 A HIS 187 n 187 HIS 187 A PRO 188 n 188 PRO 188 A SER 189 n 189 SER 189 A PRO 190 n 190 PRO 190 A LEU 191 n 191 LEU 191 A SER 192 n 192 SER 192 A ALA 193 n 193 ALA 193 A HIS 194 n 194 HIS 194 A ARG 195 n 195 ARG 195 A GLY 196 n 196 GLY 196 A PHE 197 n 197 PHE 197 A PHE 198 n 198 PHE 198 A GLY 199 n 199 GLY 199 A CYS 200 n 200 CYS 200 A ASN 201 n 201 ASN 201 A HIS 202 n 202 HIS 202 A PHE 203 n 203 PHE 203 A VAL 204 n 204 VAL 204 A LEU 205 n 205 LEU 205 A ALA 206 n 206 ALA 206 A ASN 207 n 207 ASN 207 A GLN 208 n 208 GLN 208 A TRP 209 n 209 TRP 209 A LEU 210 n 210 LEU 210 A GLU 211 n 211 GLU 211 A GLN 212 n 212 GLN 212 A HIS 213 n 213 HIS 213 A GLY 214 n 214 GLY 214 A GLU 215 n 215 GLU 215 A THR 216 n 216 THR 216 A PRO 217 n 217 PRO 217 A ILE 218 n 218 ILE 218 A ASP 219 n 219 ASP 219 A TRP 220 n 220 TRP 220 A MET 221 n 221 MET 221 A PRO 222 n 222 PRO 222 A VAL 223 n 223 VAL 223 A LEU 224 n 224 LEU 224 A PRO 225 n 225 PRO 225 A ALA 226 n 226 ALA 226 A GLU 227 n 227 GLU 227 A SER 228 n 228 SER 228 A GLU 229 n 229 GLU 229 A 0.182 0.194 0.188 0.202 0.241 0.250 1162 1305 5.0 5.0 21937 author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 120 A O LEU 120 A N VAL 58 A N VAL 58 A O VAL 59 A O VAL 59 A N VAL 160 A N VAL 160 A O PHE 161 A O PHE 161 A N HIS 181 A N HIS 181 1 A MET 1 A MET 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A ASN 3 A ASN 3 1 Y 1 A GLU 4 A GLU 4 1 Y 1 15.64 1.40 123.60 139.24 A A A CD NE CZ ARG ARG ARG 80 80 80 N 1 6.02 0.50 120.30 126.32 A A A NE CZ NH1 ARG ARG ARG 80 80 80 N 1 -6.43 0.50 120.30 113.87 A A A NE CZ NH2 ARG ARG ARG 80 80 80 N 1 -3.83 0.50 120.30 116.47 A A A NE CZ NH2 ARG ARG ARG 195 195 195 N 1 -10.46 1.60 122.70 112.24 A A A O C N CYS CYS ASN 200 200 201 Y 1 -24.48 2.50 121.70 97.22 A A A C N CA CYS ASN ASN 200 201 201 Y 1 A GLN 63 -114.10 -81.12 1 A GLN 71 -83.61 -72.33 1 A HIS 73 -148.08 33.51 1 A PHE 77 68.44 -12.60 1 A THR 99 -133.30 -34.38 1 A LEU 139 -80.00 -155.79 0.250 0.194 0.202 1.60 99 8488 1305 24809 7462 5.0 92.5 EVERY 20TH REFLECTION 1 FREE R 1.0 MOLECULAR REPLACEMENT PDB ENTRY 1UDG ENGH AND HUBER MOEWS & KRETSINGER 0 2117 1.60 99 300 2090 0 0 1790 0.008 0.024 0.000 0.026 0.041 0.050 0.012 0.000 0.060 1.60 99.0 1EUG 27664 1.5 0.095 1 7.3 4.2 97.9 0.280 1.60 1.70 3.1 1 2.9 97.9 data scaling X-GEN data reduction X-GEN phasing AMoRE refinement SHELXL-97 CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED 1 N N 2 N N A TRP 7 A TRP 7 HELX_P A LEU 11 A LEU 11 1 1 5 A GLU 14 A GLU 14 HELX_P A GLN 16 A GLN 16 5 2 3 A PRO 18 A PRO 18 HELX_P A GLN 32 A GLN 32 1 3 15 A GLN 41 A GLN 41 HELX_P A ASP 43 A ASP 43 5 4 3 A ASN 46 A ASN 46 HELX_P A PHE 50 A PHE 50 1 5 5 A LEU 53 A LEU 53 HELX_P A ASP 55 A ASP 55 5 6 3 A PRO 87 A PRO 87 HELX_P A GLU 97 A GLU 97 1 7 11 A GLU 112 A GLU 112 HELX_P A GLN 117 A GLN 117 1 8 6 A TRP 141 A TRP 141 HELX_P A HIS 155 A HIS 155 1 9 15 A SER 166 A SER 166 HELX_P A LYS 171 A LYS 171 1 10 6 A ALA 193 A ALA 193 HELX_P A ARG 195 A ARG 195 5 11 3 A HIS 202 A HIS 202 HELX_P A GLN 212 A GLN 212 1 12 11 HYDROLASE GLYCOSYLASE, HYDROLASE A TYR 38 A TYR 38 1 A PRO 39 A PRO 39 -6.42 UNG_ECOLI UNP 1 P12295 1 229 1EUG 1 229 P12295 A 1 1 229 1 ARG engineered mutation HIS 213 1EUG A P12295 UNP 213 213 4 parallel parallel parallel A VAL 119 A VAL 119 A ASN 123 A ASN 123 A VAL 58 A VAL 58 A GLY 62 A GLY 62 A VAL 160 A VAL 160 A TRP 164 A TRP 164 A HIS 181 A HIS 181 A ALA 185 A ALA 185 19 P 21 21 21