1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
King, G.F.
Maciejewski, M.W.
Pan, B.
Mullen, G.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
7
1013
1017
10.1038/80917
11062554
Structural basis for the topological specificity function of MinE.
2000
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
56
641
649
A Division Inhibitor and a Topological Specificity Factor Coded for by the Minicell Locus Determine Proper Placement of the Division Septum in E. coli
1989
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
92
4313
4317
Proper Placement of the Escherichia coli Division Site Requires Two Functions that are Associated with Different Domains of the MinE Protein
1995
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
91
685
694
The MinE ring: An FtsZ-Independent Cell Structure Required for Selection of the Correct Division Site in E. coli
1997
UK
MOL.MICROBIOL.
MOMIEE
2007
0950-382X
31
1161
1169
10.1046/j.1365-2958.1999.01256.x
The Dimerization and Topological Specificity Functions of MinE Reside in a Structurally Autonomous C-terminal Domain
1999
10.2210/pdb1ev0/pdb
pdb_00001ev0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
6713.656
MINE
MINE TOPOLOGICAL SPECIFICITY DOMAIN
2
man
polymer
CELL DIVISION TOPOLOGICAL SPECIFICITY FACTOR
no
no
RSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
RSDAEPHYLPQLRKDILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
PLASMID
PET15B
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-11-01
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
RCSB
Y
RCSB
2000-04-19
REL
REL
The structure was determined using triple-resonance
NMR spectroscopy. Intermonomer NOEs
were determined using a heterolabeled
protein sample.
Lowest energy and least restraint violations
60
20
3D_15N-separated_NOESY
3D_HNHA and 3D_HNHB
2D HMQC-J
3D_15N-separated_TOCSY
3D_13C-separated_NOESY
3D_CBCA(CO)NH and 3D_HNCACB
3D HNCO
3D HCCH-TOCSY
3D_C(CO)NH_TOCSY and 3D_HC(CO)NH_TOCSY
13C and 15N 3D_edited/filtered_NOESY
0.075
5.7
ambient
298
K
900 structures were calculated using
torsion angle dynamics (DYANA).
The best 60 structures were then
refined using dynamical simulated
annealing in X-PLOR.
torsion angle dynamics followed by
dynamical simulated annealing
1
lowest energy
3.0 mM U-15N,13C MinE; 20 mM sodium
phosphate; 50 mM NaCl; 15 mM DTT;
1 mM EDTA; 0.02% sodium azide;
1 mM 4-(2-aminoethyl)benzenesulfonyl
fluoride; pH 5.7
92.5% H2O, 7.5% D2O
3.5 mM U-15N MinE; 20 mM sodium
phosphate; 50 mM NaCl; 15 mM DTT;
1 mM EDTA; 0.02% sodium azide;
1 mM 4-(2-aminoethyl)benzenesulfonyl
fluoride; pH 5.7
92.5% H2O, 7.5% D2O
2.13 mM unlabeled MinE; 2.06 mM
U-15N,13C MinE; 20 mM sodium
phosphate; 50 mM NaCl; 15 mM DTT;
1.5 mM EDTA; 0.02% sodium azide;
0.2 mM PMSF; pH 5.7
95% H2O/5% D2O
3.0 mM U-15N,13C MinE; 20 mM sodium
phosphate; 50 mM NaCl; 15 mM DTT;
1.5 mM EDTA; 0.02% sodium azide;
0.2 mM PMSF; pH 5.7
100% D2O
Molecular Simulations
processing
Felix
97.0
Tai-he Xia and Christian Bartels
data analysis
XEASY
1.3.13
Peter Guentert
structure solution
DYANA
1.5
Axel Brunger
refinement
X-PLOR
3.851
600
Varian
INOVA
500
Varian
INOVA
ARG
31
n
1
ARG
31
A
SER
32
n
2
SER
32
A
ASP
33
n
3
ASP
33
A
ALA
34
n
4
ALA
34
A
GLU
35
n
5
GLU
35
A
PRO
36
n
6
PRO
36
A
HIS
37
n
7
HIS
37
A
TYR
38
n
8
TYR
38
A
LEU
39
n
9
LEU
39
A
PRO
40
n
10
PRO
40
A
GLN
41
n
11
GLN
41
A
LEU
42
n
12
LEU
42
A
ARG
43
n
13
ARG
43
A
LYS
44
n
14
LYS
44
A
ASP
45
n
15
ASP
45
A
ILE
46
n
16
ILE
46
A
LEU
47
n
17
LEU
47
A
GLU
48
n
18
GLU
48
A
VAL
49
n
19
VAL
49
A
ILE
50
n
20
ILE
50
A
CYS
51
n
21
CYS
51
A
LYS
52
n
22
LYS
52
A
TYR
53
n
23
TYR
53
A
VAL
54
n
24
VAL
54
A
GLN
55
n
25
GLN
55
A
ILE
56
n
26
ILE
56
A
ASP
57
n
27
ASP
57
A
PRO
58
n
28
PRO
58
A
GLU
59
n
29
GLU
59
A
MET
60
n
30
MET
60
A
VAL
61
n
31
VAL
61
A
THR
62
n
32
THR
62
A
VAL
63
n
33
VAL
63
A
GLN
64
n
34
GLN
64
A
LEU
65
n
35
LEU
65
A
GLU
66
n
36
GLU
66
A
GLN
67
n
37
GLN
67
A
LYS
68
n
38
LYS
68
A
ASP
69
n
39
ASP
69
A
GLY
70
n
40
GLY
70
A
ASP
71
n
41
ASP
71
A
ILE
72
n
42
ILE
72
A
SER
73
n
43
SER
73
A
ILE
74
n
44
ILE
74
A
LEU
75
n
45
LEU
75
A
GLU
76
n
46
GLU
76
A
LEU
77
n
47
LEU
77
A
ASN
78
n
48
ASN
78
A
VAL
79
n
49
VAL
79
A
THR
80
n
50
THR
80
A
LEU
81
n
51
LEU
81
A
PRO
82
n
52
PRO
82
A
GLU
83
n
53
GLU
83
A
ALA
84
n
54
ALA
84
A
GLU
85
n
55
GLU
85
A
GLU
86
n
56
GLU
86
A
LEU
87
n
57
LEU
87
A
LYS
88
n
58
LYS
88
A
ARG
31
n
1
ARG
31
B
SER
32
n
2
SER
32
B
ASP
33
n
3
ASP
33
B
ALA
34
n
4
ALA
34
B
GLU
35
n
5
GLU
35
B
PRO
36
n
6
PRO
36
B
HIS
37
n
7
HIS
37
B
TYR
38
n
8
TYR
38
B
LEU
39
n
9
LEU
39
B
PRO
40
n
10
PRO
40
B
GLN
41
n
11
GLN
41
B
LEU
42
n
12
LEU
42
B
ARG
43
n
13
ARG
43
B
LYS
44
n
14
LYS
44
B
ASP
45
n
15
ASP
45
B
ILE
46
n
16
ILE
46
B
LEU
47
n
17
LEU
47
B
GLU
48
n
18
GLU
48
B
VAL
49
n
19
VAL
49
B
ILE
50
n
20
ILE
50
B
CYS
51
n
21
CYS
51
B
LYS
52
n
22
LYS
52
B
TYR
53
n
23
TYR
53
B
VAL
54
n
24
VAL
54
B
GLN
55
n
25
GLN
55
B
ILE
56
n
26
ILE
56
B
ASP
57
n
27
ASP
57
B
PRO
58
n
28
PRO
58
B
GLU
59
n
29
GLU
59
B
MET
60
n
30
MET
60
B
VAL
61
n
31
VAL
61
B
THR
62
n
32
THR
62
B
VAL
63
n
33
VAL
63
B
GLN
64
n
34
GLN
64
B
LEU
65
n
35
LEU
65
B
GLU
66
n
36
GLU
66
B
GLN
67
n
37
GLN
67
B
LYS
68
n
38
LYS
68
B
ASP
69
n
39
ASP
69
B
GLY
70
n
40
GLY
70
B
ASP
71
n
41
ASP
71
B
ILE
72
n
42
ILE
72
B
SER
73
n
43
SER
73
B
ILE
74
n
44
ILE
74
B
LEU
75
n
45
LEU
75
B
GLU
76
n
46
GLU
76
B
LEU
77
n
47
LEU
77
B
ASN
78
n
48
ASN
78
B
VAL
79
n
49
VAL
79
B
THR
80
n
50
THR
80
B
LEU
81
n
51
LEU
81
B
PRO
82
n
52
PRO
82
B
GLU
83
n
53
GLU
83
B
ALA
84
n
54
ALA
84
B
GLU
85
n
55
GLU
85
B
GLU
86
n
56
GLU
86
B
LEU
87
n
57
LEU
87
B
LYS
88
n
58
LYS
88
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
68
A
N
LYS
38
A
O
ILE
72
A
O
ILE
42
A
O
LEU
81
A
O
LEU
51
B
N
SER
73
B
N
SER
43
B
O
ASN
78
B
O
ASN
48
B
N
THR
62
B
N
THR
32
1
A
VAL
54
-150.49
-138.47
1
A
GLN
55
-170.96
106.85
1
A
ILE
74
-150.02
88.14
1
A
GLU
83
-61.11
-170.37
1
A
ALA
84
-177.50
139.67
1
A
GLU
85
-176.79
-39.67
1
B
VAL
54
-150.47
-138.45
1
B
GLN
55
-170.97
106.87
1
B
ILE
74
-150.05
88.13
1
B
GLU
83
-61.15
-170.36
1
B
ALA
84
-177.49
139.70
1
B
GLU
85
-176.82
-39.63
2
A
HIS
37
77.13
-4.54
2
A
VAL
54
-151.17
-138.51
2
A
GLN
55
-170.62
107.22
2
A
GLU
83
-60.72
-168.91
2
A
ALA
84
-171.56
-171.09
2
A
GLU
86
60.06
67.69
2
B
HIS
37
77.01
-4.42
2
B
VAL
54
-151.11
-138.55
2
B
GLN
55
-170.59
107.20
2
B
GLU
83
-60.73
-168.89
2
B
ALA
84
-171.54
-171.08
3
A
HIS
37
76.04
-1.44
3
A
VAL
54
-150.73
-138.14
3
A
GLN
55
-173.31
108.50
3
A
GLU
85
-173.62
-61.40
3
A
GLU
86
-177.20
39.19
3
B
HIS
37
76.07
-1.44
3
B
VAL
54
-150.73
-138.25
3
B
GLN
55
-173.19
108.49
3
B
GLU
85
-173.62
-61.52
3
B
GLU
86
-177.15
39.16
4
A
VAL
54
-151.09
-138.28
4
A
GLN
55
-172.45
109.28
4
A
GLU
83
-60.13
-169.15
4
A
GLU
85
-176.27
75.31
4
A
GLU
86
-172.01
34.25
4
B
VAL
54
-151.08
-138.38
4
B
GLN
55
-172.37
109.29
4
B
GLU
83
-60.21
-169.10
4
B
GLU
85
-176.13
75.29
4
B
GLU
86
-172.08
34.36
5
A
VAL
54
-151.41
-138.48
5
A
GLN
55
-170.05
107.39
5
A
LEU
75
-160.60
102.61
5
A
ALA
84
179.95
118.64
5
A
GLU
85
-177.07
43.38
5
B
VAL
54
-151.41
-138.50
5
B
GLN
55
-170.05
107.41
5
B
LEU
75
-160.61
102.61
5
B
ALA
84
179.94
118.60
5
B
GLU
85
-177.03
43.32
6
A
HIS
37
75.19
-1.42
6
A
VAL
54
-151.72
-138.55
6
A
GLN
55
-171.74
108.91
6
A
GLU
83
-63.63
-168.59
6
A
ALA
84
-177.09
85.46
6
A
GLU
85
-62.13
88.74
6
A
GLU
86
60.21
89.17
6
B
HIS
37
75.27
-1.49
6
B
VAL
54
-151.64
-138.46
6
B
GLN
55
-171.78
108.88
6
B
GLU
83
-63.62
-168.54
6
B
ALA
84
-177.08
85.38
6
B
GLU
85
-62.06
88.84
6
B
GLU
86
60.11
89.19
7
A
HIS
37
76.18
-2.40
7
A
VAL
54
-151.44
-138.30
7
A
GLN
55
-169.26
106.88
7
A
GLU
83
-59.48
-170.12
7
A
ALA
84
-177.26
108.53
7
A
GLU
85
-176.76
93.20
7
B
HIS
37
76.23
-2.46
7
B
VAL
54
-151.47
-138.34
7
B
GLN
55
-169.23
106.86
7
B
GLU
83
-59.52
-170.03
7
B
ALA
84
-177.27
108.46
7
B
GLU
85
-176.79
93.15
8
A
HIS
37
77.41
-4.66
8
A
VAL
54
-151.33
-138.27
8
A
GLN
55
-170.25
109.71
8
A
GLU
83
-61.12
-169.54
8
A
GLU
85
-66.23
-174.12
8
B
HIS
37
77.45
-4.62
8
B
VAL
54
-151.24
-138.27
8
B
GLN
55
-170.22
109.71
8
B
GLU
83
-61.14
-169.55
8
B
GLU
85
-66.21
-174.21
9
A
HIS
37
74.77
-0.88
9
A
VAL
54
-151.21
-138.65
9
A
GLN
55
-166.70
112.64
9
A
GLU
83
-55.17
171.92
9
A
ALA
84
-176.53
-163.50
9
B
HIS
37
74.82
-0.88
9
B
VAL
54
-151.18
-138.61
9
B
GLN
55
-166.70
112.60
9
B
GLU
83
-55.21
171.92
9
B
ALA
84
-176.56
-163.58
10
A
VAL
54
-151.31
-138.30
10
A
GLN
55
-173.73
108.32
10
A
GLU
83
-61.67
-169.46
10
A
ALA
84
-176.29
39.82
10
A
GLU
85
-66.95
82.67
10
A
GLU
86
-178.09
37.54
10
B
VAL
54
-151.38
-138.26
10
B
GLN
55
-173.78
108.35
10
B
GLU
83
-61.62
-169.38
10
B
ALA
84
-176.35
39.81
10
B
GLU
85
-67.01
82.77
10
B
GLU
86
-178.11
37.46
11
A
HIS
37
74.67
-0.29
11
A
VAL
54
-150.77
-138.59
11
A
GLN
55
-172.36
106.89
11
A
ALA
84
-179.65
137.72
11
A
GLU
85
-178.61
114.24
11
B
HIS
37
74.65
-0.29
11
B
VAL
54
-150.80
-138.63
11
B
GLN
55
-172.38
106.98
11
B
ALA
84
-179.65
137.68
11
B
GLU
85
-178.57
114.29
12
A
HIS
37
80.02
-9.06
12
A
VAL
54
-151.29
-138.11
12
A
GLN
55
-172.92
107.69
12
A
GLU
83
-61.89
-169.20
12
A
ALA
84
-176.83
127.33
12
B
HIS
37
79.96
-9.07
12
B
VAL
54
-151.34
-138.09
12
B
GLN
55
-172.95
107.72
12
B
GLU
83
-61.77
-169.27
12
B
ALA
84
-176.76
127.35
13
A
VAL
54
-150.77
-138.80
13
A
GLN
55
-168.60
109.12
13
A
GLU
83
-61.09
-175.21
13
A
ALA
84
-178.36
141.70
13
A
GLU
85
-177.43
-41.72
13
A
GLU
86
-177.25
37.22
13
B
VAL
54
-150.78
-138.86
13
B
GLN
55
-168.55
109.14
13
B
GLU
83
-61.02
-175.29
13
B
ALA
84
-178.31
141.75
13
B
GLU
85
-177.41
-41.69
13
B
GLU
86
-177.27
37.15
14
A
HIS
37
74.73
-0.27
14
A
VAL
54
-152.17
-138.51
14
A
GLN
55
-168.47
111.70
14
A
GLU
83
-60.76
-172.92
14
A
ALA
84
-178.16
147.67
14
A
GLU
85
-177.20
51.43
14
A
GLU
86
-177.76
39.42
14
B
HIS
37
74.71
-0.19
14
B
VAL
54
-152.09
-138.50
14
B
GLN
55
-168.43
111.74
14
B
GLU
83
-60.84
-173.04
14
B
ALA
84
-178.11
147.68
14
B
GLU
85
-177.14
51.41
14
B
GLU
86
-177.75
39.31
15
A
VAL
54
-151.15
-138.39
15
A
GLN
55
-169.64
109.47
15
A
ALA
84
-178.88
126.68
15
A
GLU
85
-176.89
53.67
15
B
VAL
54
-151.24
-138.50
15
B
GLN
55
-169.55
109.70
15
B
ALA
84
-179.02
126.66
15
B
GLU
85
-176.94
53.68
16
A
VAL
54
-150.59
-138.58
16
A
GLN
55
-171.58
107.31
16
A
ALA
84
-178.08
132.53
16
A
GLU
85
-154.16
32.66
16
A
GLU
86
59.40
70.98
16
B
VAL
54
-150.62
-138.56
16
B
GLN
55
-171.57
107.29
16
B
ALA
84
-178.18
132.45
16
B
GLU
85
-154.17
32.73
16
B
GLU
86
59.37
70.96
17
A
VAL
54
-151.94
-138.09
17
A
GLN
55
-171.21
111.27
17
A
ALA
84
-178.83
127.99
17
A
GLU
85
-165.78
37.66
17
B
VAL
54
-152.00
-138.06
17
B
GLN
55
-171.21
111.14
17
B
ALA
84
-178.83
127.93
17
B
GLU
85
-165.71
37.60
18
A
HIS
37
77.86
-6.06
18
A
VAL
54
-150.47
-138.36
18
A
GLN
55
-174.05
106.53
18
A
GLU
83
-61.33
-169.77
18
A
ALA
84
-177.62
-176.97
18
A
GLU
85
-177.59
-51.32
18
B
HIS
37
77.86
-6.08
18
B
VAL
54
-150.46
-138.37
18
B
GLN
55
-174.08
106.51
18
B
GLU
83
-61.34
-169.84
18
B
ALA
84
-177.61
-176.99
18
B
GLU
85
-177.57
-51.36
19
A
SER
32
68.38
-46.34
19
A
HIS
37
76.36
-2.02
19
A
VAL
54
-151.24
-138.50
19
A
GLN
55
-170.18
108.25
19
A
ILE
74
-150.18
89.33
19
A
GLU
83
-60.62
-170.65
19
A
ALA
84
-177.52
78.50
19
B
SER
32
68.26
-46.18
19
B
HIS
37
76.28
-2.01
19
B
VAL
54
-151.13
-138.52
19
B
GLN
55
-170.16
108.18
19
B
ILE
74
-150.17
89.37
19
B
GLU
83
-60.54
-170.69
19
B
ALA
84
-177.55
78.60
20
A
HIS
37
76.05
-2.40
20
A
VAL
54
-151.49
-138.07
20
A
GLN
55
-172.38
109.20
20
A
GLU
83
-62.29
-168.01
20
A
ALA
84
-177.17
135.26
20
A
GLU
85
-177.70
98.85
20
B
HIS
37
76.04
-2.41
20
B
VAL
54
-151.48
-138.07
20
B
GLN
55
-172.35
109.20
20
B
GLU
83
-62.20
-167.99
20
B
ALA
84
-177.22
135.19
20
B
GLU
85
-177.63
98.91
SOLUTION STRUCTURE OF THE MINE TOPOLOGICAL SPECIFICITY DOMAIN
1
N
N
1
N
N
A
ARG
31
A
ARG
1
HELX_P
A
GLU
35
A
GLU
5
5
1
5
A
TYR
38
A
TYR
8
HELX_P
A
VAL
54
A
VAL
24
1
2
17
A
ASP
57
A
ASP
27
HELX_P
A
GLU
59
A
GLU
29
5
3
3
B
ARG
31
B
ARG
1
HELX_P
B
GLU
35
B
GLU
5
5
4
5
B
TYR
38
B
TYR
8
HELX_P
B
VAL
54
B
VAL
24
1
5
17
B
ASP
57
B
ASP
27
HELX_P
B
GLU
59
B
GLU
29
5
6
3
CELL CYCLE
MinE, topological specificity, cell division, MinCD, minicell, CELL CYCLE
MINE_ECOLI
UNP
1
P0A734
31
88
1EV0
31
88
P0A734
A
1
1
58
31
88
1EV0
31
88
P0A734
B
1
1
58
4
anti-parallel
anti-parallel
anti-parallel
A
VAL
61
A
VAL
31
A
LYS
68
A
LYS
38
A
ILE
72
A
ILE
42
A
LEU
81
A
LEU
51
B
ILE
72
B
ILE
42
B
LEU
81
B
LEU
51
B
VAL
61
B
VAL
31
B
LYS
68
B
LYS
38
1
P 1