1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lin, Y.
Dotsch, V.
Wintner, T.
Peariso, K.
Myers, L.C.
Penner-Hahn, J.E.
Verdine, G.L.
Wagner, G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
US
Biochemistry
BICHAW
0033
0006-2960
40
4261
4271
10.1021/bi002109p
11284682
Structural basis for the functional switch of the E. coli Ada protein
2001
10.2210/pdb1eyf/pdb
pdb_00001eyf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
10469.978
ADA REGULATORY PROTEIN
N-TERMINAL 10 KDA DOMAIN
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
no
no
MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRARHALRENVSFYANASEALAAGFRPCKRCQPDKANPR
QHRLDKITHACR
MKKATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRARHALRENVSFYANASEALAAGFRPCKRCQPDKANPR
QHRLDKITHACR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
PLASMID
PADA39
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-09-09
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1ADN contains the preliminary structures of the same protein on which the refined structures are based
RCSB
Y
RCSB
2000-05-06
REL
ZN
ZINC ION
This structure was determined using standard 2D homonuclear and 3D heteronuclear techinques
structures with the lowest energy
50
25
2D NOESY
2D NOESY
3D_15N-separated_NOESY
HNHA
6.4
ambient
298
K
6.4
ambient
298
K
6.4
ambient
298
K
6.4
ambient
298
K
the structures are based on a total of 1014 restraints, 872 are NOE-derived
distance constraints, 82 dihedral angle restraints,46 distance restraints
from hydrogen bonds, and 14 zinc cluster distance restraints
distance geometry
13
lowest energy
2 mM N-Ada10; 25 mM sodium phosphate buffer pH 6.4,
50 mM NaCl, and 10 mM 2-mercaptoethanol;
90% H2O, 10% D2O
90% H2O/10% D2O
2 mM N-Ada10; 25 mM sodium phosphate buffer pH 6.4,
50 mM NaCl, and 10 mM 2-mercaptoethanol;
100% D2O
90% H2O/10% D2O
2 mM N-Ada10 U-15N; 25 mM sodium phosphate buffer pH 6.4,
50 mM NaCl, and 10 mM 2-mercaptoethanol;
90% H2O, 10% D2O
100% D2O
2 mM N-Ada10 U-15N, 13C; 25 mM sodium phosphate buffer pH 6.4,
50 mM NaCl, and 10 mM 2-mercaptoethanol;
90% H2O, 10% D2O
90% H2O/10% D2O
collection
UXNMR
collection
VNMR
processing
Felix
95
Brartels et al
data analysis
XEASY
Havel et al
structure solution
DGII
Havel et al
refinement
DGII
500
Bruker
AMX
600
Bruker
AMX
500
Varian
VXRS
500
Varian
UNITY
400
Varian
UNITYPLUS
750
Varian
UNITYPLUS
ZN
93
2
ZN
ZN
93
A
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
LYS
3
n
3
LYS
3
A
ALA
4
n
4
ALA
4
A
THR
5
n
5
THR
5
A
CYS
6
n
6
CYS
6
A
LEU
7
n
7
LEU
7
A
THR
8
n
8
THR
8
A
ASP
9
n
9
ASP
9
A
ASP
10
n
10
ASP
10
A
GLN
11
n
11
GLN
11
A
ARG
12
n
12
ARG
12
A
TRP
13
n
13
TRP
13
A
GLN
14
n
14
GLN
14
A
SER
15
n
15
SER
15
A
VAL
16
n
16
VAL
16
A
LEU
17
n
17
LEU
17
A
ALA
18
n
18
ALA
18
A
ARG
19
n
19
ARG
19
A
ASP
20
n
20
ASP
20
A
PRO
21
n
21
PRO
21
A
ASN
22
n
22
ASN
22
A
ALA
23
n
23
ALA
23
A
ASP
24
n
24
ASP
24
A
GLY
25
n
25
GLY
25
A
GLU
26
n
26
GLU
26
A
PHE
27
n
27
PHE
27
A
VAL
28
n
28
VAL
28
A
PHE
29
n
29
PHE
29
A
ALA
30
n
30
ALA
30
A
VAL
31
n
31
VAL
31
A
ARG
32
n
32
ARG
32
A
THR
33
n
33
THR
33
A
THR
34
n
34
THR
34
A
GLY
35
n
35
GLY
35
A
ILE
36
n
36
ILE
36
A
PHE
37
n
37
PHE
37
A
CYS
38
n
38
CYS
38
A
ARG
39
n
39
ARG
39
A
PRO
40
n
40
PRO
40
A
SER
41
n
41
SER
41
A
CYS
42
n
42
CYS
42
A
ARG
43
n
43
ARG
43
A
ALA
44
n
44
ALA
44
A
ARG
45
n
45
ARG
45
A
HIS
46
n
46
HIS
46
A
ALA
47
n
47
ALA
47
A
LEU
48
n
48
LEU
48
A
ARG
49
n
49
ARG
49
A
GLU
50
n
50
GLU
50
A
ASN
51
n
51
ASN
51
A
VAL
52
n
52
VAL
52
A
SER
53
n
53
SER
53
A
PHE
54
n
54
PHE
54
A
TYR
55
n
55
TYR
55
A
ALA
56
n
56
ALA
56
A
ASN
57
n
57
ASN
57
A
ALA
58
n
58
ALA
58
A
SER
59
n
59
SER
59
A
GLU
60
n
60
GLU
60
A
ALA
61
n
61
ALA
61
A
LEU
62
n
62
LEU
62
A
ALA
63
n
63
ALA
63
A
ALA
64
n
64
ALA
64
A
GLY
65
n
65
GLY
65
A
PHE
66
n
66
PHE
66
A
ARG
67
n
67
ARG
67
A
PRO
68
n
68
PRO
68
A
CYS
69
n
69
CYS
69
A
LYS
70
n
70
LYS
70
A
ARG
71
n
71
ARG
71
A
CYS
72
n
72
CYS
72
A
GLN
73
n
73
GLN
73
A
PRO
74
n
74
PRO
74
A
ASP
75
n
75
ASP
75
A
LYS
76
n
76
LYS
76
A
ALA
77
n
77
ALA
77
A
ASN
78
n
78
ASN
78
A
PRO
79
n
79
PRO
79
A
ARG
80
n
80
ARG
80
A
GLN
81
n
81
GLN
81
A
HIS
82
n
82
HIS
82
A
ARG
83
n
83
ARG
83
A
LEU
84
n
84
LEU
84
A
ASP
85
n
85
ASP
85
A
LYS
86
n
86
LYS
86
A
ILE
87
n
87
ILE
87
A
THR
88
n
88
THR
88
A
HIS
89
n
89
HIS
89
A
ALA
90
n
90
ALA
90
A
CYS
91
n
91
CYS
91
A
ARG
92
n
92
ARG
92
A
author_defined_assembly
1
monomeric
A
CYS
38
A
SG
CYS
38
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
42
A
SG
CYS
42
1_555
114.4
A
CYS
38
A
SG
CYS
38
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
69
A
SG
CYS
69
1_555
94.0
A
CYS
42
A
SG
CYS
42
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
69
A
SG
CYS
69
1_555
128.5
A
CYS
38
A
SG
CYS
38
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
72
A
SG
CYS
72
1_555
103.5
A
CYS
42
A
SG
CYS
42
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
72
A
SG
CYS
72
1_555
96.6
A
CYS
69
A
SG
CYS
69
1_555
A
ZN
93
B
ZN
ZN
1_555
A
CYS
72
A
SG
CYS
72
1_555
118.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
55
A
N
TYR
55
A
O
VAL
28
A
O
VAL
28
A
N
VAL
31
A
N
VAL
31
A
O
ILE
36
A
O
ILE
36
A
N
PHE
37
A
N
PHE
37
A
O
ARG
67
A
O
ARG
67
1
A
A
HG21
HG22
VAL
VAL
31
52
1.17
2
A
A
HD2
HB2
TYR
ALA
55
61
1.24
2
A
A
HB1
HE1
ALA
PHE
23
27
1.34
3
A
A
HB2
HE1
ALA
TYR
30
55
1.08
3
A
A
HG22
HD1
VAL
TYR
28
55
1.32
3
A
A
HG21
HB2
VAL
TYR
28
55
1.35
4
A
A
HB2
HE2
ALA
TYR
30
55
0.97
4
A
A
HG2
HD2
ARG
PRO
67
68
1.14
4
A
A
HG21
HB2
VAL
TYR
28
55
1.30
4
A
A
HG22
HD2
VAL
TYR
28
55
1.31
5
A
A
HB2
HE1
ALA
TYR
30
55
1.02
5
A
A
HE2
HB1
PHE
ALA
37
58
1.27
5
A
A
HG21
HB2
VAL
TYR
28
55
1.28
6
A
A
HA
HB3
GLN
GLN
11
14
1.26
6
A
A
HB2
HE1
ALA
TYR
30
55
1.27
6
A
A
HG21
HB2
VAL
TYR
28
55
1.30
6
A
A
HD2
HB3
PHE
ALA
37
61
1.30
7
A
A
HA
HB3
GLN
GLN
11
14
1.27
8
A
A
HE1
HG3
PHE
PRO
27
40
1.31
8
A
A
HG21
HB2
VAL
TYR
28
55
1.34
8
A
A
HD12
HH21
LEU
ARG
7
12
1.35
9
A
A
HG13
HG22
VAL
THR
31
33
1.24
10
A
A
HB2
HE2
ALA
TYR
30
55
1.01
10
A
A
HG22
HD2
VAL
TYR
28
55
1.28
10
A
A
HG21
HB2
VAL
TYR
28
55
1.30
11
A
A
HG21
HB2
VAL
TYR
28
55
1.31
11
A
A
HG13
HG22
VAL
THR
31
33
1.34
11
A
A
HD22
H
LEU
ASP
84
85
1.35
12
A
A
HA
HB2
GLN
GLN
11
14
1.31
12
A
A
HG21
HB2
VAL
TYR
28
55
1.33
13
A
A
HG21
HB2
VAL
TYR
28
55
1.30
14
A
A
HG21
HB2
VAL
TYR
28
55
1.27
15
A
A
HG21
HB2
VAL
TYR
28
55
1.29
15
A
A
HE2
HB1
PHE
ALA
37
58
1.30
16
A
A
HB2
HE1
ALA
TYR
30
55
1.10
16
A
A
HG21
HB2
VAL
TYR
28
55
1.30
17
A
A
HA
HB2
GLN
GLN
11
14
1.28
18
A
A
HB2
HE2
ALA
TYR
30
55
1.09
18
A
A
HG22
HD2
VAL
TYR
28
55
1.26
18
A
A
HG21
HB2
VAL
TYR
28
55
1.31
19
A
A
HD2
HB3
PHE
ALA
37
61
1.15
19
A
A
HG21
HB2
VAL
TYR
28
55
1.34
20
A
A
HB2
HE1
ALA
TYR
30
55
1.24
20
A
A
HG21
HG22
VAL
VAL
31
52
1.31
20
A
A
HA
HB2
GLN
GLN
11
14
1.34
21
A
A
HG21
HA
VAL
PRO
16
40
1.29
21
A
A
HA
HB2
GLN
GLN
11
14
1.31
22
A
A
HB2
HE1
ALA
TYR
30
55
1.01
22
A
A
HG21
HB3
VAL
PRO
16
40
1.18
22
A
A
HA
HB3
GLN
GLN
11
14
1.27
22
A
A
HG21
HB2
VAL
TYR
28
55
1.29
23
A
A
HB2
HE2
ALA
TYR
30
55
0.94
23
A
A
HG22
HD2
VAL
TYR
28
55
1.16
23
A
A
HA
HB2
GLN
GLN
11
14
1.29
23
A
A
HG2
HD2
ARG
PRO
39
40
1.29
23
A
A
HG21
HB2
VAL
TYR
28
55
1.33
24
A
A
HA
HB3
GLN
GLN
11
14
1.24
24
A
A
HD21
HD3
ASN
PRO
78
79
1.32
24
A
A
HG21
HB2
VAL
TYR
28
55
1.32
25
A
A
HG22
HD2
VAL
TYR
28
55
1.22
25
A
A
HB1
HE2
ALA
PHE
30
66
1.24
25
A
A
HG21
HB2
VAL
TYR
28
55
1.33
1
3.32
0.50
120.30
123.62
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
2
3.33
0.50
120.30
123.63
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
3
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
4
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
5
3.27
0.50
120.30
123.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
6
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
7
3.32
0.50
120.30
123.62
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
8
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
9
3.32
0.50
120.30
123.62
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
10
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
11
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
12
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
13
3.33
0.50
120.30
123.63
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
14
3.40
0.50
120.30
123.70
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
15
3.36
0.50
120.30
123.66
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
16
3.28
0.50
120.30
123.58
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
17
3.36
0.50
120.30
123.66
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
18
3.33
0.50
120.30
123.63
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
19
3.38
0.50
120.30
123.68
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
20
3.37
0.50
120.30
123.67
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
21
3.29
0.50
120.30
123.59
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
22
3.30
0.50
120.30
123.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
23
3.32
0.50
120.30
123.62
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
24
3.37
0.50
120.30
123.67
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
25
3.31
0.50
120.30
123.61
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
92
92
92
N
1
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
2
A
A
C
OXT
ARG
ARG
92
92
0.200
0.019
1.229
1.429
N
3
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
4
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
5
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
6
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
7
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
8
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
9
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
10
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
11
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
12
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
13
A
A
C
OXT
ARG
ARG
92
92
0.200
0.019
1.229
1.429
N
14
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
15
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
16
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
17
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
18
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
19
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
20
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
21
A
A
C
OXT
ARG
ARG
92
92
0.200
0.019
1.229
1.429
N
22
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
23
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
24
A
A
C
OXT
ARG
ARG
92
92
0.200
0.019
1.229
1.429
N
25
A
A
C
OXT
ARG
ARG
92
92
0.201
0.019
1.229
1.430
N
1
A
LYS
3
168.24
151.74
1
A
ALA
4
172.87
47.65
1
A
THR
5
47.17
-96.13
1
A
ASP
10
-41.67
-75.93
1
A
ARG
19
76.55
30.23
1
A
ASP
20
-51.21
89.17
1
A
PHE
27
-177.98
-174.95
1
A
CYS
42
-60.64
94.72
1
A
ARG
45
-45.48
106.78
1
A
ASP
75
75.87
62.30
1
A
LYS
76
-103.17
45.97
1
A
PRO
79
-73.57
-88.54
1
A
ARG
80
-23.19
-70.77
1
A
GLN
81
-15.97
123.28
1
A
HIS
82
-28.52
134.47
1
A
ARG
83
-97.35
56.01
1
A
LEU
84
-42.43
154.29
1
A
ASP
85
-39.86
-81.76
1
A
LYS
86
167.04
-48.52
1
A
HIS
89
59.44
93.15
2
A
ALA
4
170.94
-56.19
2
A
THR
5
89.54
-84.45
2
A
CYS
6
-102.29
48.19
2
A
ASP
20
-66.18
98.38
2
A
ASP
24
-40.93
-98.47
2
A
PHE
27
-175.85
-178.06
2
A
PRO
40
-49.32
-18.10
2
A
ARG
45
-43.16
105.79
2
A
ARG
71
-135.19
-42.97
2
A
CYS
72
-102.32
-72.92
2
A
PRO
74
-92.40
-98.97
2
A
ASP
75
177.30
49.58
2
A
LYS
76
-90.78
37.65
2
A
ASN
78
-145.20
56.31
2
A
ARG
80
-20.93
-71.21
2
A
GLN
81
59.21
-177.07
2
A
ARG
83
48.39
91.73
2
A
LEU
84
179.50
108.30
2
A
ASP
85
-148.44
-145.30
2
A
LYS
86
64.48
-172.67
2
A
ALA
90
62.63
-174.21
3
A
ALA
4
177.65
-156.19
3
A
CYS
6
-100.51
62.79
3
A
ASP
10
-42.38
-72.95
3
A
ASP
20
-55.46
99.32
3
A
PHE
27
-172.68
-178.70
3
A
CYS
42
-63.45
90.98
3
A
PRO
79
-46.72
104.96
3
A
ARG
80
-38.40
-162.24
3
A
GLN
81
5.15
84.50
3
A
ARG
83
29.71
55.58
3
A
LEU
84
-38.39
109.78
3
A
LYS
86
84.17
121.34
3
A
ILE
87
49.39
81.66
3
A
HIS
89
-149.85
-83.08
3
A
ALA
90
-119.91
-84.14
3
A
CYS
91
169.44
135.18
4
A
LYS
2
65.52
63.37
4
A
ALA
4
-60.49
-98.93
4
A
THR
5
30.97
49.94
4
A
ASP
10
-42.77
-75.98
4
A
ARG
19
72.19
30.36
4
A
ASP
20
-69.23
94.07
4
A
PHE
27
-171.08
-177.60
4
A
CYS
42
-67.39
92.10
4
A
ARG
45
-43.58
107.87
4
A
CYS
69
-47.93
150.66
4
A
ARG
71
-131.47
-45.92
4
A
CYS
72
-103.63
-66.67
4
A
PRO
74
-94.96
-96.24
4
A
ASP
75
171.95
67.13
4
A
ARG
80
-21.96
-67.71
4
A
GLN
81
-19.27
131.88
4
A
ARG
83
40.00
65.43
4
A
LEU
84
179.52
130.07
4
A
ASP
85
-39.94
-73.96
4
A
LYS
86
165.03
-52.87
4
A
ILE
87
35.42
86.58
4
A
ALA
90
-151.94
27.11
4
A
CYS
91
39.10
35.95
5
A
LYS
2
33.02
84.03
5
A
LYS
3
75.55
136.80
5
A
ALA
4
170.94
120.05
5
A
THR
5
51.31
90.57
5
A
CYS
6
-66.99
83.65
5
A
ASP
10
-47.65
-73.04
5
A
PHE
27
-179.43
-179.15
5
A
CYS
42
-57.98
97.63
5
A
ALA
44
-40.94
150.18
5
A
ARG
45
-45.49
98.73
5
A
LEU
48
-48.19
153.67
5
A
CYS
72
-106.80
-68.09
5
A
ASP
75
78.28
55.72
5
A
PRO
79
-69.36
-93.66
5
A
ARG
80
-18.79
-97.53
5
A
GLN
81
-19.79
122.03
5
A
ARG
83
-113.86
51.68
5
A
ASP
85
-121.66
-53.11
5
A
LYS
86
78.69
138.86
5
A
HIS
89
75.19
67.27
5
A
ALA
90
-44.56
103.99
6
A
LYS
3
-60.95
-88.07
6
A
ALA
4
160.34
35.62
6
A
THR
5
-159.63
-68.04
6
A
CYS
6
57.04
97.91
6
A
ASP
20
-51.84
94.33
6
A
ASP
24
-55.59
107.84
6
A
CYS
69
-43.28
153.61
6
A
ARG
71
-135.51
-51.08
6
A
CYS
72
-103.01
-62.43
6
A
PRO
74
-33.34
91.40
6
A
ASP
75
-148.60
-70.05
6
A
LYS
76
-114.86
77.24
6
A
ASN
78
-34.08
135.09
6
A
ARG
80
-21.41
-72.50
6
A
HIS
82
46.48
95.76
6
A
LEU
84
-39.71
114.97
6
A
ASP
85
-118.26
-81.56
6
A
LYS
86
157.16
-179.76
6
A
ILE
87
64.54
85.52
7
A
ALA
4
-45.03
92.92
7
A
ASP
10
-47.64
-78.19
7
A
ASP
20
-53.40
94.48
7
A
ARG
45
-47.15
108.57
7
A
LEU
48
-46.78
150.56
7
A
ARG
71
-134.19
-47.34
7
A
CYS
72
-105.52
-60.68
7
A
PRO
74
-32.58
88.21
7
A
ASP
75
-129.86
-62.63
7
A
ARG
80
24.72
-106.63
7
A
GLN
81
66.26
85.30
7
A
ARG
83
37.65
76.17
7
A
LEU
84
179.51
114.63
7
A
LYS
86
166.48
126.55
8
A
ALA
4
71.39
152.44
8
A
THR
5
168.49
136.40
8
A
CYS
6
76.59
48.03
8
A
THR
8
-48.65
151.98
8
A
ASP
10
-47.77
-78.69
8
A
ASP
20
-56.84
92.36
8
A
CYS
69
-44.38
152.22
8
A
CYS
72
-95.01
-60.56
8
A
ASP
75
73.76
56.10
8
A
ALA
77
-63.16
84.73
8
A
ASN
78
162.21
93.82
8
A
PRO
79
-68.74
-107.91
8
A
ARG
80
-30.09
-72.99
8
A
GLN
81
-27.55
143.67
8
A
ARG
83
21.68
59.87
8
A
LEU
84
-34.33
140.90
8
A
LYS
86
172.31
-76.13
8
A
ILE
87
65.03
97.12
8
A
ALA
90
-159.93
71.50
9
A
ALA
4
81.12
120.06
9
A
CYS
6
78.12
140.06
9
A
ASP
10
-46.10
-77.44
9
A
ASP
20
-52.29
88.57
9
A
CYS
42
-52.35
102.68
9
A
ALA
44
-46.66
153.59
9
A
LYS
76
-107.40
40.97
9
A
ALA
77
-66.67
96.50
9
A
ASN
78
-52.74
100.83
9
A
ARG
80
-22.15
-73.80
9
A
GLN
81
40.17
86.55
9
A
LEU
84
179.55
53.01
9
A
ASP
85
-68.46
-83.28
9
A
LYS
86
61.89
141.21
10
A
LYS
2
50.12
-157.06
10
A
ALA
4
-45.77
153.75
10
A
ASP
10
-44.96
-77.31
10
A
ARG
19
79.50
32.78
10
A
ALA
44
-47.81
152.01
10
A
ARG
45
-48.31
107.61
10
A
HIS
46
-49.77
157.40
10
A
PRO
74
-35.31
92.18
10
A
ASP
75
-164.87
-66.35
10
A
PRO
79
-68.79
-87.65
10
A
ARG
80
-21.08
-67.82
10
A
GLN
81
-16.33
109.93
10
A
ARG
83
47.15
93.75
10
A
LEU
84
179.47
152.65
10
A
ASP
85
-62.51
-75.44
10
A
LYS
86
168.25
161.92
10
A
THR
88
-52.93
-87.71
10
A
ALA
90
65.64
-164.51
11
A
LYS
2
-124.75
-84.80
11
A
ALA
4
164.94
-46.07
11
A
ASP
10
-40.61
-74.81
11
A
ASP
20
-64.22
96.93
11
A
PHE
27
-173.58
-178.34
11
A
ARG
45
-45.05
95.94
11
A
LEU
48
-47.98
152.56
11
A
ARG
71
-130.44
-45.23
11
A
CYS
72
-98.98
-67.88
11
A
ASP
75
72.52
59.43
11
A
LYS
76
-103.32
45.57
11
A
ASN
78
-59.43
106.94
11
A
ARG
80
-16.99
-88.31
11
A
GLN
81
-15.47
109.21
11
A
HIS
82
56.86
118.05
11
A
ARG
83
-100.51
58.19
11
A
LEU
84
-37.28
142.01
11
A
ASP
85
-45.35
-71.97
11
A
LYS
86
166.18
-168.60
11
A
ILE
87
72.48
153.44
11
A
HIS
89
55.03
95.41
11
A
ALA
90
-145.22
-72.24
12
A
LYS
2
-162.40
-153.57
12
A
LYS
3
83.41
124.40
12
A
ALA
4
82.21
-19.12
12
A
ASP
10
-44.25
-76.86
12
A
CYS
42
-64.42
92.14
12
A
ARG
45
-43.71
93.49
12
A
ARG
71
-135.25
-50.26
12
A
CYS
72
-88.85
-74.87
12
A
PRO
74
-39.63
90.37
12
A
ASP
75
-169.21
-72.12
12
A
ARG
80
24.64
-105.51
12
A
GLN
81
160.39
151.21
12
A
ARG
83
32.25
55.51
12
A
LEU
84
-33.86
129.20
12
A
ASP
85
-63.37
-142.04
12
A
LYS
86
169.03
-39.20
12
A
ILE
87
41.52
79.63
13
A
LYS
3
-172.21
-147.72
13
A
ALA
4
82.12
-89.91
13
A
THR
5
41.21
84.65
13
A
ARG
19
49.23
25.51
13
A
ASP
20
-55.41
97.38
13
A
CYS
42
-62.79
93.64
13
A
ARG
71
-137.46
-48.76
13
A
PRO
74
-25.21
81.02
13
A
ASP
75
67.19
63.80
13
A
ARG
80
-20.74
-70.03
13
A
HIS
82
74.85
124.24
13
A
ARG
83
-61.91
99.80
13
A
LEU
84
179.54
122.20
13
A
ASP
85
27.80
-86.02
13
A
LYS
86
163.59
151.06
13
A
HIS
89
71.47
169.08
14
A
THR
5
70.55
164.07
14
A
THR
8
-48.67
167.69
14
A
ASP
20
-43.56
90.88
14
A
PHE
27
-172.95
-178.22
14
A
ALA
44
-46.06
151.33
14
A
ARG
45
-46.03
102.11
14
A
CYS
69
-48.62
150.81
14
A
ARG
71
-132.30
-48.00
14
A
PRO
74
-40.32
91.55
14
A
ASP
75
-134.45
-60.78
14
A
ASN
78
72.37
119.14
14
A
ARG
80
-18.00
-93.40
14
A
GLN
81
159.80
-52.85
14
A
HIS
82
43.32
85.91
14
A
LEU
84
179.48
134.48
14
A
ASP
85
-151.07
-142.24
14
A
LYS
86
90.16
-10.21
14
A
HIS
89
83.33
23.57
15
A
LYS
2
-91.78
-98.13
15
A
LYS
3
38.41
49.37
15
A
ALA
4
45.17
80.92
15
A
CYS
6
-102.74
70.25
15
A
ASP
10
-47.79
-79.82
15
A
ASP
24
-67.36
93.34
15
A
CYS
42
-67.90
98.56
15
A
ARG
45
-58.66
81.15
15
A
ALA
47
-48.67
153.19
15
A
CYS
69
-42.13
150.83
15
A
ARG
71
-130.01
-46.60
15
A
CYS
72
-104.00
-65.35
15
A
ASP
75
75.25
60.61
15
A
ARG
80
-14.76
-88.09
15
A
GLN
81
72.97
51.97
15
A
HIS
82
179.00
129.29
15
A
LEU
84
-36.02
114.73
15
A
LYS
86
-38.70
155.86
15
A
THR
88
-70.11
-84.04
15
A
HIS
89
76.32
129.06
15
A
ALA
90
57.96
95.80
15
A
CYS
91
-67.56
84.33
16
A
ALA
4
80.69
151.67
16
A
THR
5
-157.38
-44.68
16
A
CYS
6
33.30
89.36
16
A
THR
8
-52.84
172.45
16
A
ASP
10
-41.18
-73.03
16
A
ASP
20
-51.39
94.32
16
A
PHE
27
-172.13
-177.16
16
A
CYS
42
-62.50
91.82
16
A
ARG
45
-43.14
91.19
16
A
ALA
47
-41.64
150.92
16
A
CYS
69
-42.86
153.43
16
A
ARG
71
-135.96
-49.73
16
A
PRO
74
-45.66
93.37
16
A
ASP
75
-142.91
-74.62
16
A
ASN
78
85.82
142.84
16
A
ARG
80
24.70
-105.58
16
A
ARG
83
71.22
81.65
16
A
LEU
84
179.48
107.64
16
A
LYS
86
76.88
38.43
16
A
ALA
90
-159.87
-75.12
17
A
ALA
4
50.78
-92.43
17
A
THR
8
-52.98
172.73
17
A
ASP
10
-40.82
-74.93
17
A
ASP
20
-51.76
90.90
17
A
CYS
42
-60.80
91.89
17
A
ARG
45
-43.33
107.69
17
A
LEU
48
-47.38
150.99
17
A
ARG
71
-130.13
-45.79
17
A
PRO
74
-34.78
90.49
17
A
ASP
75
-150.33
-79.23
17
A
PRO
79
-81.33
47.54
17
A
ARG
80
-20.50
-73.10
17
A
GLN
81
48.05
-94.55
17
A
LEU
84
-44.96
165.33
17
A
ASP
85
-133.06
-65.26
17
A
HIS
89
-95.20
59.22
17
A
ALA
90
82.58
120.97
18
A
LYS
2
78.18
-70.69
18
A
LYS
3
74.10
73.88
18
A
ALA
4
-43.40
98.06
18
A
ASP
10
-43.39
-77.64
18
A
ASP
20
-52.07
93.99
18
A
CYS
42
-67.69
85.96
18
A
LEU
48
-47.26
152.79
18
A
ARG
71
-137.45
-64.61
18
A
CYS
72
-91.92
-60.21
18
A
PRO
74
-33.53
82.81
18
A
PRO
79
-55.30
96.55
18
A
ARG
80
-20.76
-72.72
18
A
GLN
81
54.51
-176.72
18
A
ARG
83
65.03
87.24
18
A
LEU
84
179.52
127.00
18
A
ASP
85
-119.55
-84.77
18
A
ILE
87
56.78
89.32
18
A
CYS
91
-127.16
-71.48
19
A
LYS
2
52.54
96.20
19
A
LYS
3
39.49
-108.41
19
A
ALA
4
158.13
-152.76
19
A
THR
5
89.03
34.65
19
A
CYS
6
65.50
76.39
19
A
THR
8
-59.15
170.93
19
A
ASP
10
-43.90
-75.80
19
A
ASP
20
-45.00
94.38
19
A
CYS
42
-45.89
100.81
19
A
ARG
71
-122.53
-55.99
19
A
PRO
79
-47.07
108.24
19
A
ARG
80
23.56
-109.65
19
A
GLN
81
31.05
73.83
19
A
ARG
83
53.67
99.14
19
A
LEU
84
179.49
116.27
19
A
ASP
85
-63.07
-156.75
19
A
LYS
86
163.44
88.31
19
A
THR
88
-78.32
-167.32
20
A
LYS
3
69.30
115.67
20
A
ALA
4
67.44
112.37
20
A
THR
5
64.30
95.53
20
A
ASP
20
-59.66
96.07
20
A
CYS
42
-64.68
91.14
20
A
ARG
45
-40.02
101.83
20
A
LEU
48
-49.30
157.07
20
A
ARG
49
-33.87
-38.46
20
A
ARG
71
-134.98
-50.75
20
A
PRO
74
-55.12
82.12
20
A
ASP
75
-162.34
-70.57
20
A
ALA
77
-51.68
175.92
20
A
ARG
80
-24.02
-69.98
20
A
GLN
81
-25.56
-87.30
20
A
HIS
82
-148.60
-57.11
20
A
ARG
83
32.26
86.75
20
A
LEU
84
179.69
92.08
20
A
ASP
85
-125.40
-68.71
20
A
LYS
86
-30.58
124.47
20
A
HIS
89
-96.62
-71.42
20
A
ALA
90
166.34
-41.92
21
A
ALA
4
71.27
97.16
21
A
THR
5
63.53
112.92
21
A
THR
8
-48.52
152.43
21
A
ASP
10
-40.22
-70.83
21
A
ASP
20
-54.40
93.98
21
A
PHE
27
-176.68
-178.26
21
A
CYS
42
-55.10
100.64
21
A
CYS
69
-41.37
151.17
21
A
ARG
71
-137.12
-48.69
21
A
CYS
72
-100.65
-74.48
21
A
PRO
74
-32.51
87.56
21
A
ASP
75
-153.90
-69.13
21
A
ASN
78
62.85
72.70
21
A
ARG
80
-15.85
-100.76
21
A
GLN
81
31.62
76.64
21
A
HIS
82
63.06
151.92
21
A
ARG
83
-112.11
58.07
21
A
LEU
84
-38.62
133.40
21
A
LYS
86
63.27
117.82
21
A
ILE
87
178.14
98.32
21
A
ALA
90
-113.12
-75.83
22
A
LYS
3
72.32
42.67
22
A
ALA
4
173.63
134.62
22
A
THR
8
-48.96
172.24
22
A
ASP
20
-57.84
98.37
22
A
PHE
27
-170.68
-178.61
22
A
CYS
42
-55.21
101.89
22
A
ARG
45
-50.83
87.04
22
A
ARG
71
-131.91
-64.76
22
A
CYS
72
-87.11
-70.81
22
A
PRO
74
-39.77
91.56
22
A
ASP
75
-145.70
-71.88
22
A
ASN
78
38.70
58.51
22
A
ARG
80
-21.46
-78.26
22
A
GLN
81
5.22
82.86
22
A
LEU
84
179.51
160.90
22
A
ASP
85
-111.67
-71.60
22
A
LYS
86
-39.09
137.03
22
A
ILE
87
-170.35
95.37
22
A
ALA
90
-155.29
-69.48
22
A
CYS
91
-167.13
-46.84
23
A
ALA
4
51.47
-151.87
23
A
ASP
10
-39.08
-72.17
23
A
ASP
20
-53.30
95.94
23
A
CYS
42
-55.75
107.91
23
A
ARG
45
-54.13
90.08
23
A
CYS
69
-40.56
150.07
23
A
ARG
71
-136.81
-50.56
23
A
CYS
72
-95.25
-74.46
23
A
PRO
74
-40.27
91.11
23
A
ASP
75
-149.19
-67.10
23
A
ASN
78
-35.94
149.44
23
A
ARG
80
-20.33
-76.10
23
A
GLN
81
-16.09
84.26
23
A
ARG
83
26.96
59.42
23
A
LEU
84
-37.02
127.35
23
A
ASP
85
-114.11
-83.22
23
A
LYS
86
160.94
86.07
24
A
LYS
2
169.99
-49.10
24
A
LYS
3
55.95
88.62
24
A
ALA
4
52.21
-153.94
24
A
THR
5
50.83
-171.77
24
A
THR
8
-52.26
178.69
24
A
ARG
19
70.54
38.45
24
A
CYS
42
-63.86
98.47
24
A
ALA
44
-45.73
166.72
24
A
CYS
69
-44.51
152.70
24
A
ARG
71
-138.90
-49.77
24
A
CYS
72
-93.81
-69.76
24
A
PRO
74
-38.17
90.04
24
A
ASP
75
-136.28
-64.87
24
A
ASN
78
-23.70
-47.39
24
A
PRO
79
-42.76
90.59
24
A
ARG
80
-20.47
-103.28
24
A
GLN
81
156.80
169.61
24
A
LEU
84
179.52
139.03
24
A
ASP
85
-72.74
-70.99
24
A
LYS
86
-40.51
100.66
24
A
ALA
90
-57.36
-85.89
25
A
LYS
2
-125.55
-98.75
25
A
ALA
4
-179.79
-78.46
25
A
THR
5
52.54
110.69
25
A
CYS
6
95.99
64.57
25
A
ASP
10
-42.33
-73.26
25
A
ASP
20
-60.30
95.05
25
A
PHE
27
-176.68
-178.54
25
A
PRO
40
-37.94
-26.96
25
A
CYS
42
-54.47
97.85
25
A
ALA
44
-49.78
154.93
25
A
ARG
71
-139.60
-48.52
25
A
CYS
72
-82.18
-74.67
25
A
PRO
74
-28.43
84.36
25
A
ASP
75
-130.63
-61.84
25
A
LYS
76
-112.05
59.57
25
A
ARG
80
16.06
-116.46
25
A
GLN
81
27.13
-91.34
25
A
HIS
82
170.75
154.08
25
A
LEU
84
179.58
113.32
25
A
LYS
86
50.99
-169.34
25
A
HIS
89
-139.24
-45.68
25
A
ALA
90
-46.72
102.85
25
A
CYS
91
66.20
-164.90
REFINED STRUCTURE OF THE DNA METHYL PHOSPHOTRIESTER REPAIR DOMAIN OF E. COLI ADA
1
N
N
2
N
N
A
THR
8
A
THR
8
HELX_P
A
ALA
18
A
ALA
18
1
1
11
A
LEU
48
A
LEU
48
HELX_P
A
GLU
50
A
GLU
50
5
2
3
A
ASN
57
A
ASN
57
HELX_P
A
ALA
64
A
ALA
64
1
3
8
metalc
2.353
A
CYS
38
A
SG
CYS
38
1_555
A
ZN
93
B
ZN
ZN
1_555
metalc
2.244
A
CYS
42
A
SG
CYS
42
1_555
A
ZN
93
B
ZN
ZN
1_555
metalc
2.358
A
CYS
69
A
SG
CYS
69
1_555
A
ZN
93
B
ZN
ZN
1_555
metalc
2.370
A
CYS
72
A
SG
CYS
72
1_555
A
ZN
93
B
ZN
ZN
1_555
DNA BINDING PROTEIN
One central beta-sheet sandwiched between two alpha-helices, DNA BINDING PROTEIN
ADA_ECOLI
UNP
1
P06134
1
92
1EYF
1
92
P06134
A
1
1
92
4
anti-parallel
anti-parallel
parallel
A
VAL
52
A
VAL
52
A
TYR
55
A
TYR
55
A
VAL
28
A
VAL
28
A
VAL
31
A
VAL
31
A
ILE
36
A
ILE
36
A
CYS
38
A
CYS
38
A
ARG
67
A
ARG
67
A
PRO
68
A
PRO
68
BINDING SITE FOR RESIDUE ZN A 93
A
ZN
93
Software
4
A
CYS
38
A
CYS
38
4
1_555
A
CYS
42
A
CYS
42
4
1_555
A
CYS
69
A
CYS
69
4
1_555
A
CYS
72
A
CYS
72
4
1_555