0.017795
0.000000
0.000000
0.000000
0.013904
0.000000
0.000000
0.000000
0.012725
0.00000
0.00000
0.00000
Maignan, S.
Guilloteau, J.P.
Pouzieux, S.
Choi-Sledeski, Y.M.
Becker, M.R.
Klein, S.I.
Ewing, W.R.
Pauls, H.W.
Spada, A.P.
Mikol, V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
56.196
71.922
78.587
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C27 H30 N4 O3
458.552
3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER
RPR128515
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
N
303
N
C
N
304
N
N
N
305
R
C
N
306
N
C
N
307
R
C
N
308
N
C
N
309
N
O
N
310
N
C
N
311
N
C
N
312
N
N
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
N
319
N
C
N
320
N
N
N
321
N
N
N
322
N
O
N
323
N
O
N
324
N
C
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
R
C
N
374
N
O
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
N
C
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
N
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
N
N
414
S
C
N
415
N
C
N
416
N
O
N
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
N
424
N
O
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
N
N
438
S
C
N
439
N
C
N
440
N
O
N
441
N
C
N
442
N
C
N
443
N
C
N
444
N
O
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
Y
277
N
doub
Y
278
N
sing
N
279
N
sing
Y
280
N
sing
Y
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
sing
N
285
N
sing
Y
286
N
doub
N
287
N
sing
N
288
N
sing
Y
289
N
doub
Y
290
N
sing
N
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
sing
N
297
N
sing
Y
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
Y
324
N
doub
Y
325
N
sing
N
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
doub
N
330
N
sing
Y
331
N
sing
N
332
N
sing
Y
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
Y
383
N
doub
Y
384
N
sing
Y
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
doub
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
43
3226
3232
10.1021/jm000940u
10966741
Crystal structures of human factor Xa complexed with potent inhibitors.
2000
10.2210/pdb1ezq/pdb
pdb_00001ezq
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95
1
IMAGE PLATE
1998-04-30
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.901
1.0
DW32
LURE
0.901
SYNCHROTRON
LURE BEAMLINE DW32
28550.596
COAGULATION FACTOR XA
3.4.21.6
ACTIVATED FACTOR XA, HEAVY CHAIN
1
nat
polymer
15210.793
COAGULATION FACTOR XA
3.4.21.6
FACTOR X LIGHT CHAIN
1
nat
polymer
synthetic organic molecule
40.078
CALCIUM ION
1
syn
non-polymer
458.552
3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER
1
syn
non-polymer
18.015
water
109
nat
water
no
no
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKA
KSHAPEVITSSPLK
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKA
KSHAPEVITSSPLK
A
polypeptide(L)
no
no
EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT
RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER
EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT
RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
human
Homo
sample
9606
Homo sapiens
1
1.81
32.19
VAPOR DIFFUSION, HANGING DROP
5.7
18-20% PEG 600, 50mM Mes-NaOH, 1mM RPR128515, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 292K
292
pdbx_unobs_or_zero_occ_atoms
software
chem_comp_atom
chem_comp_bond
database_2
entity
pdbx_entity_src_syn
pdbx_struct_conn_angle
pdbx_unobs_or_zero_occ_atoms
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Advisory
Refinement description
Advisory
Data collection
Database references
Derived calculations
Source and taxonomy
Structure summary
1
0
2000-09-20
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.details
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
human coagulation factor Xa with inhibitor RPR208815
human coagulation factor Xa with inhibitor RPR208707
bovine pancreatic trypsin with inhibitor RPR131247
bovine pancreatic trypsin with inhibitor RPR128515
RCSB
Y
RCSB
2000-05-11
REL
REL
CA
CALCIUM ION
RPR
3-[(3'-AMINOMETHYL-BIPHENYL-4-CARBONYL)-AMINO]-2-(3-CARBAMIMIDOYL-BENZYL)-BUTYRIC ACID METHYL ESTER
HOH
water
CA
1
3
CA
CA
1
A
RPR
1
4
RPR
RPR
265
A
HOH
2
5
HOH
HOH
266
A
HOH
3
5
HOH
HOH
267
A
HOH
4
5
HOH
HOH
268
A
HOH
5
5
HOH
HOH
269
A
HOH
6
5
HOH
HOH
270
A
HOH
7
5
HOH
HOH
271
A
HOH
9
5
HOH
HOH
272
A
HOH
10
5
HOH
HOH
273
A
HOH
11
5
HOH
HOH
274
A
HOH
12
5
HOH
HOH
275
A
HOH
13
5
HOH
HOH
276
A
HOH
14
5
HOH
HOH
277
A
HOH
15
5
HOH
HOH
278
A
HOH
16
5
HOH
HOH
279
A
HOH
17
5
HOH
HOH
280
A
HOH
20
5
HOH
HOH
281
A
HOH
21
5
HOH
HOH
282
A
HOH
22
5
HOH
HOH
283
A
HOH
23
5
HOH
HOH
284
A
HOH
24
5
HOH
HOH
285
A
HOH
25
5
HOH
HOH
286
A
HOH
26
5
HOH
HOH
287
A
HOH
27
5
HOH
HOH
288
A
HOH
30
5
HOH
HOH
289
A
HOH
35
5
HOH
HOH
290
A
HOH
37
5
HOH
HOH
291
A
HOH
39
5
HOH
HOH
292
A
HOH
41
5
HOH
HOH
293
A
HOH
43
5
HOH
HOH
294
A
HOH
44
5
HOH
HOH
295
A
HOH
45
5
HOH
HOH
296
A
HOH
46
5
HOH
HOH
297
A
HOH
49
5
HOH
HOH
298
A
HOH
52
5
HOH
HOH
299
A
HOH
53
5
HOH
HOH
300
A
HOH
55
5
HOH
HOH
301
A
HOH
56
5
HOH
HOH
302
A
HOH
57
5
HOH
HOH
303
A
HOH
59
5
HOH
HOH
304
A
HOH
60
5
HOH
HOH
305
A
HOH
61
5
HOH
HOH
306
A
HOH
63
5
HOH
HOH
307
A
HOH
64
5
HOH
HOH
308
A
HOH
66
5
HOH
HOH
309
A
HOH
68
5
HOH
HOH
310
A
HOH
70
5
HOH
HOH
311
A
HOH
72
5
HOH
HOH
312
A
HOH
73
5
HOH
HOH
313
A
HOH
74
5
HOH
HOH
314
A
HOH
75
5
HOH
HOH
315
A
HOH
76
5
HOH
HOH
316
A
HOH
77
5
HOH
HOH
317
A
HOH
78
5
HOH
HOH
318
A
HOH
79
5
HOH
HOH
319
A
HOH
81
5
HOH
HOH
320
A
HOH
83
5
HOH
HOH
321
A
HOH
84
5
HOH
HOH
322
A
HOH
87
5
HOH
HOH
323
A
HOH
88
5
HOH
HOH
324
A
HOH
89
5
HOH
HOH
325
A
HOH
90
5
HOH
HOH
326
A
HOH
91
5
HOH
HOH
327
A
HOH
92
5
HOH
HOH
328
A
HOH
93
5
HOH
HOH
329
A
HOH
94
5
HOH
HOH
330
A
HOH
95
5
HOH
HOH
331
A
HOH
96
5
HOH
HOH
332
A
HOH
97
5
HOH
HOH
333
A
HOH
98
5
HOH
HOH
334
A
HOH
99
5
HOH
HOH
335
A
HOH
100
5
HOH
HOH
336
A
HOH
101
5
HOH
HOH
337
A
HOH
104
5
HOH
HOH
338
A
HOH
105
5
HOH
HOH
339
A
HOH
106
5
HOH
HOH
340
A
HOH
107
5
HOH
HOH
341
A
HOH
108
5
HOH
HOH
342
A
HOH
109
5
HOH
HOH
343
A
HOH
110
5
HOH
HOH
344
A
HOH
111
5
HOH
HOH
345
A
HOH
112
5
HOH
HOH
346
A
HOH
113
5
HOH
HOH
347
A
HOH
115
5
HOH
HOH
348
A
HOH
116
5
HOH
HOH
349
A
HOH
117
5
HOH
HOH
350
A
HOH
118
5
HOH
HOH
351
A
HOH
120
5
HOH
HOH
352
A
HOH
121
5
HOH
HOH
353
A
HOH
122
5
HOH
HOH
354
A
HOH
124
5
HOH
HOH
355
A
HOH
126
5
HOH
HOH
356
A
HOH
127
5
HOH
HOH
357
A
HOH
128
5
HOH
HOH
358
A
HOH
18
5
HOH
HOH
52
B
HOH
19
5
HOH
HOH
53
B
HOH
28
5
HOH
HOH
54
B
HOH
34
5
HOH
HOH
55
B
HOH
48
5
HOH
HOH
56
B
HOH
50
5
HOH
HOH
57
B
HOH
51
5
HOH
HOH
58
B
HOH
54
5
HOH
HOH
59
B
HOH
80
5
HOH
HOH
60
B
HOH
82
5
HOH
HOH
61
B
HOH
102
5
HOH
HOH
62
B
HOH
103
5
HOH
HOH
63
B
HOH
114
5
HOH
HOH
64
B
HOH
119
5
HOH
HOH
65
B
HOH
123
5
HOH
HOH
66
B
HOH
125
5
HOH
HOH
67
B
ILE
16
n
1
ILE
16
A
VAL
17
n
2
VAL
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
GLN
20
n
5
GLN
20
A
GLU
21
n
6
GLU
21
A
CYS
22
n
7
CYS
22
A
LYS
23
n
8
LYS
23
A
ASP
24
n
9
ASP
24
A
GLY
25
n
10
GLY
25
A
GLU
26
n
11
GLU
26
A
CYS
27
n
12
CYS
27
A
PRO
28
n
13
PRO
28
A
TRP
29
n
14
TRP
29
A
GLN
30
n
15
GLN
30
A
ALA
31
n
16
ALA
31
A
LEU
32
n
17
LEU
32
A
LEU
33
n
18
LEU
33
A
ILE
34
n
19
ILE
34
A
ASN
35
n
20
ASN
35
A
GLU
36
n
21
GLU
36
A
GLU
37
n
22
GLU
37
A
ASN
38
n
23
ASN
38
A
GLU
39
n
24
GLU
39
A
GLY
40
n
25
GLY
40
A
PHE
41
n
26
PHE
41
A
CYS
42
n
27
CYS
42
A
GLY
43
n
28
GLY
43
A
GLY
44
n
29
GLY
44
A
THR
45
n
30
THR
45
A
ILE
46
n
31
ILE
46
A
LEU
47
n
32
LEU
47
A
SER
48
n
33
SER
48
A
GLU
49
n
34
GLU
49
A
PHE
50
n
35
PHE
50
A
TYR
51
n
36
TYR
51
A
ILE
52
n
37
ILE
52
A
LEU
53
n
38
LEU
53
A
THR
54
n
39
THR
54
A
ALA
55
n
40
ALA
55
A
ALA
56
n
41
ALA
56
A
HIS
57
n
42
HIS
57
A
CYS
58
n
43
CYS
58
A
LEU
59
n
44
LEU
59
A
TYR
60
n
45
TYR
60
A
GLN
61
n
46
GLN
61
A
ALA
61
n
47
A
ALA
61
A
LYS
62
n
48
LYS
62
A
ARG
63
n
49
ARG
63
A
PHE
64
n
50
PHE
64
A
LYS
65
n
51
LYS
65
A
VAL
66
n
52
VAL
66
A
ARG
67
n
53
ARG
67
A
VAL
68
n
54
VAL
68
A
GLY
69
n
55
GLY
69
A
ASP
70
n
56
ASP
70
A
ARG
71
n
57
ARG
71
A
ASN
72
n
58
ASN
72
A
THR
73
n
59
THR
73
A
GLU
74
n
60
GLU
74
A
GLN
75
n
61
GLN
75
A
GLU
76
n
62
GLU
76
A
GLU
77
n
63
GLU
77
A
GLY
78
n
64
GLY
78
A
GLY
79
n
65
GLY
79
A
GLU
80
n
66
GLU
80
A
ALA
81
n
67
ALA
81
A
VAL
82
n
68
VAL
82
A
HIS
83
n
69
HIS
83
A
GLU
84
n
70
GLU
84
A
VAL
85
n
71
VAL
85
A
GLU
86
n
72
GLU
86
A
VAL
87
n
73
VAL
87
A
VAL
88
n
74
VAL
88
A
ILE
89
n
75
ILE
89
A
LYS
90
n
76
LYS
90
A
HIS
91
n
77
HIS
91
A
ASN
92
n
78
ASN
92
A
ARG
93
n
79
ARG
93
A
PHE
94
n
80
PHE
94
A
THR
95
n
81
THR
95
A
LYS
96
n
82
LYS
96
A
GLU
97
n
83
GLU
97
A
THR
98
n
84
THR
98
A
TYR
99
n
85
TYR
99
A
ASP
100
n
86
ASP
100
A
PHE
101
n
87
PHE
101
A
ASP
102
n
88
ASP
102
A
ILE
103
n
89
ILE
103
A
ALA
104
n
90
ALA
104
A
VAL
105
n
91
VAL
105
A
LEU
106
n
92
LEU
106
A
ARG
107
n
93
ARG
107
A
LEU
108
n
94
LEU
108
A
LYS
109
n
95
LYS
109
A
THR
110
n
96
THR
110
A
PRO
111
n
97
PRO
111
A
ILE
112
n
98
ILE
112
A
THR
113
n
99
THR
113
A
PHE
114
n
100
PHE
114
A
ARG
115
n
101
ARG
115
A
MET
116
n
102
MET
116
A
ASN
117
n
103
ASN
117
A
VAL
118
n
104
VAL
118
A
ALA
119
n
105
ALA
119
A
PRO
120
n
106
PRO
120
A
ALA
121
n
107
ALA
121
A
CYS
122
n
108
CYS
122
A
LEU
123
n
109
LEU
123
A
PRO
124
n
110
A
PRO
124
A
GLU
124
n
111
GLU
124
A
ARG
125
n
112
ARG
125
A
ASP
126
n
113
ASP
126
A
TRP
127
n
114
TRP
127
A
ALA
128
n
115
ALA
128
A
GLU
129
n
116
GLU
129
A
SER
130
n
117
SER
130
A
THR
131
n
118
THR
131
A
LEU
131
n
119
A
LEU
131
A
MET
131
n
120
B
MET
131
A
THR
132
n
121
THR
132
A
GLN
133
n
122
GLN
133
A
LYS
134
n
123
LYS
134
A
THR
135
n
124
THR
135
A
GLY
136
n
125
GLY
136
A
ILE
137
n
126
ILE
137
A
VAL
138
n
127
VAL
138
A
SER
139
n
128
SER
139
A
GLY
140
n
129
GLY
140
A
PHE
141
n
130
PHE
141
A
GLY
142
n
131
GLY
142
A
ARG
143
n
132
ARG
143
A
THR
144
n
133
THR
144
A
HIS
145
n
134
HIS
145
A
GLU
147
n
135
GLU
147
A
LYS
148
n
136
LYS
148
A
GLY
149
n
137
GLY
149
A
ARG
150
n
138
ARG
150
A
GLN
151
n
139
GLN
151
A
SER
152
n
140
SER
152
A
THR
153
n
141
THR
153
A
ARG
154
n
142
ARG
154
A
LEU
155
n
143
LEU
155
A
LYS
156
n
144
LYS
156
A
MET
157
n
145
MET
157
A
LEU
158
n
146
LEU
158
A
GLU
159
n
147
GLU
159
A
VAL
160
n
148
VAL
160
A
PRO
161
n
149
PRO
161
A
TYR
162
n
150
TYR
162
A
VAL
163
n
151
VAL
163
A
ASP
164
n
152
ASP
164
A
ARG
165
n
153
ARG
165
A
ASN
166
n
154
ASN
166
A
SER
167
n
155
SER
167
A
CYS
168
n
156
CYS
168
A
LYS
169
n
157
LYS
169
A
LEU
170
n
158
LEU
170
A
SER
171
n
159
SER
171
A
SER
172
n
160
SER
172
A
SER
173
n
161
SER
173
A
PHE
174
n
162
PHE
174
A
ILE
175
n
163
ILE
175
A
ILE
176
n
164
ILE
176
A
THR
177
n
165
THR
177
A
GLN
178
n
166
GLN
178
A
ASN
179
n
167
ASN
179
A
MET
180
n
168
MET
180
A
PHE
181
n
169
PHE
181
A
CYS
182
n
170
CYS
182
A
ALA
183
n
171
ALA
183
A
GLY
184
n
172
GLY
184
A
TYR
185
n
173
TYR
185
A
ASP
185
n
174
A
ASP
185
A
THR
185
n
175
B
THR
185
A
LYS
186
n
176
LYS
186
A
GLN
187
n
177
GLN
187
A
GLU
188
n
178
GLU
188
A
ASP
189
n
179
ASP
189
A
ALA
190
n
180
ALA
190
A
CYS
191
n
181
CYS
191
A
GLN
192
n
182
GLN
192
A
GLY
193
n
183
GLY
193
A
ASP
194
n
184
ASP
194
A
SER
195
n
185
SER
195
A
GLY
196
n
186
GLY
196
A
GLY
197
n
187
GLY
197
A
PRO
198
n
188
PRO
198
A
HIS
199
n
189
HIS
199
A
VAL
200
n
190
VAL
200
A
THR
201
n
191
THR
201
A
ARG
202
n
192
ARG
202
A
PHE
203
n
193
PHE
203
A
LYS
204
n
194
LYS
204
A
ASP
205
n
195
ASP
205
A
THR
206
n
196
THR
206
A
TYR
207
n
197
TYR
207
A
PHE
208
n
198
PHE
208
A
VAL
209
n
199
VAL
209
A
THR
210
n
200
THR
210
A
GLY
211
n
201
GLY
211
A
ILE
212
n
202
ILE
212
A
VAL
213
n
203
VAL
213
A
SER
214
n
204
SER
214
A
TRP
215
n
205
TRP
215
A
GLY
216
n
206
GLY
216
A
GLU
217
n
207
GLU
217
A
GLY
219
n
208
GLY
219
A
CYS
220
n
209
CYS
220
A
ALA
221
n
210
ALA
221
A
ARG
222
n
211
ARG
222
A
LYS
223
n
212
LYS
223
A
GLY
223
n
213
A
GLY
223
A
LYS
224
n
214
LYS
224
A
TYR
225
n
215
TYR
225
A
GLY
226
n
216
GLY
226
A
ILE
227
n
217
ILE
227
A
TYR
228
n
218
TYR
228
A
THR
229
n
219
THR
229
A
LYS
230
n
220
LYS
230
A
VAL
231
n
221
VAL
231
A
THR
232
n
222
THR
232
A
ALA
233
n
223
ALA
233
A
PHE
234
n
224
PHE
234
A
LEU
235
n
225
LEU
235
A
LYS
236
n
226
LYS
236
A
TRP
237
n
227
TRP
237
A
ILE
238
n
228
ILE
238
A
ASP
239
n
229
ASP
239
A
ARG
240
n
230
ARG
240
A
SER
241
n
231
SER
241
A
MET
242
n
232
MET
242
A
LYS
243
n
233
LYS
243
A
THR
244
n
234
THR
244
A
n
235
245
A
n
236
246
A
n
237
247
A
n
238
248
A
n
239
249
A
n
240
250
A
n
241
251
A
n
242
252
A
n
243
253
A
n
244
254
A
n
245
255
A
n
246
256
A
n
247
257
A
n
248
258
A
n
249
259
A
n
250
260
A
n
251
261
A
n
252
262
A
n
253
263
A
n
254
264
A
n
1
-82
B
n
2
-81
B
n
3
-80
B
n
4
-79
B
n
5
-78
B
n
6
-77
B
n
7
-76
B
n
8
-75
B
n
9
-74
B
n
10
-73
B
n
11
-72
B
n
12
-71
B
n
13
-70
B
n
14
-69
B
n
15
-68
B
n
16
-67
B
n
17
-66
B
n
18
-65
B
n
19
-64
B
n
20
-63
B
n
21
-62
B
n
22
-61
B
n
23
-60
B
n
24
-59
B
n
25
-58
B
n
26
-57
B
n
27
-56
B
n
28
-55
B
n
29
-54
B
n
30
-53
B
n
31
-52
B
n
32
-51
B
n
33
-50
B
n
34
-49
B
n
35
-48
B
n
36
-47
B
n
37
-46
B
n
38
-45
B
n
39
-44
B
n
40
-43
B
n
41
-42
B
n
42
-41
B
n
43
-40
B
n
44
-39
B
n
45
-38
B
n
46
-37
B
n
47
-36
B
n
48
-35
B
n
49
-34
B
n
50
-33
B
n
51
-32
B
n
52
-31
B
n
53
-30
B
n
54
-29
B
n
55
-28
B
n
56
-27
B
n
57
-26
B
n
58
-25
B
n
59
-24
B
n
60
-23
B
n
61
-22
B
n
62
-21
B
n
63
-20
B
n
64
-19
B
n
65
-18
B
n
66
-17
B
n
67
-16
B
n
68
-15
B
n
69
-14
B
n
70
-13
B
n
71
-12
B
n
72
-11
B
n
73
-10
B
n
74
-9
B
n
75
-8
B
n
76
-7
B
n
77
-6
B
n
78
-5
B
n
79
-4
B
n
80
-3
B
n
81
-2
B
n
82
-1
B
LEU
0
n
83
LEU
0
B
CYS
1
n
84
CYS
1
B
SER
2
n
85
SER
2
B
LEU
3
n
86
LEU
3
B
ASP
4
n
87
ASP
4
B
ASN
5
n
88
ASN
5
B
GLY
6
n
89
GLY
6
B
ASP
7
n
90
ASP
7
B
CYS
8
n
91
CYS
8
B
ASP
9
n
92
ASP
9
B
GLN
10
n
93
GLN
10
B
PHE
11
n
94
PHE
11
B
CYS
12
n
95
CYS
12
B
HIS
13
n
96
HIS
13
B
GLU
14
n
97
GLU
14
B
GLU
15
n
98
GLU
15
B
GLN
16
n
99
GLN
16
B
ASN
17
n
100
ASN
17
B
SER
18
n
101
SER
18
B
VAL
19
n
102
VAL
19
B
VAL
20
n
103
VAL
20
B
CYS
21
n
104
CYS
21
B
SER
22
n
105
SER
22
B
CYS
23
n
106
CYS
23
B
ALA
24
n
107
ALA
24
B
ARG
25
n
108
ARG
25
B
GLY
26
n
109
GLY
26
B
TYR
27
n
110
TYR
27
B
THR
28
n
111
THR
28
B
LEU
29
n
112
LEU
29
B
ALA
30
n
113
ALA
30
B
ASP
31
n
114
ASP
31
B
ASN
32
n
115
ASN
32
B
GLY
33
n
116
GLY
33
B
LYS
34
n
117
LYS
34
B
ALA
35
n
118
ALA
35
B
CYS
36
n
119
CYS
36
B
ILE
37
n
120
ILE
37
B
PRO
38
n
121
PRO
38
B
THR
39
n
122
THR
39
B
GLY
40
n
123
GLY
40
B
PRO
41
n
124
PRO
41
B
TYR
42
n
125
TYR
42
B
PRO
43
n
126
PRO
43
B
CYS
44
n
127
CYS
44
B
GLY
45
n
128
GLY
45
B
LYS
46
n
129
LYS
46
B
GLN
47
n
130
GLN
47
B
THR
48
n
131
THR
48
B
LEU
49
n
132
LEU
49
B
GLU
50
n
133
GLU
50
B
n
134
51
B
author_and_software_defined_assembly
PISA
2
dimeric
2770
-22
13530
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
ASN
72
A
O
ASN
58
1_555
92.1
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
144.4
A
ASN
72
A
O
ASN
58
1_555
A
CA
1
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
80.0
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
81.2
A
ASN
72
A
O
ASN
58
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
150.6
A
GLN
75
A
O
GLN
61
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
89.0
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
100.5
A
ASN
72
A
O
ASN
58
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
161.5
A
GLN
75
A
O
GLN
61
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
96.9
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
46.4
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
74.6
A
ASN
72
A
O
ASN
58
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
93.7
A
GLN
75
A
O
GLN
61
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
71.4
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
56.9
A
GLU
80
A
OE2
GLU
66
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
102.6
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
81.6
A
ASN
72
A
O
ASN
58
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
96.0
A
GLN
75
A
O
GLN
61
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
133.5
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
111.1
A
GLU
80
A
OE2
GLU
66
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
72.8
A
HOH
285
E
O
HOH
1_555
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
154.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLN
20
A
O
GLN
5
A
N
MET
157
A
N
MET
145
A
N
VAL
160
A
N
VAL
148
A
O
GLY
136
A
O
GLY
125
A
N
SER
139
A
N
SER
128
A
O
PRO
198
A
O
PRO
188
A
N
PHE
203
A
N
PHE
193
A
O
THR
206
A
O
THR
196
A
O
TRP
215
A
O
TRP
205
A
N
ILE
227
A
N
ILE
217
A
N
TYR
228
A
N
TYR
218
A
O
PHE
181
A
O
PHE
169
A
N
HIS
83
A
N
HIS
69
A
O
VAL
66
A
O
VAL
52
A
N
ARG
67
A
N
ARG
53
A
O
LEU
32
A
O
LEU
17
A
O
LEU
33
A
O
LEU
18
A
N
PHE
41
A
N
PHE
26
A
O
THR
45
A
O
THR
30
A
N
LEU
53
A
N
LEU
38
A
N
THR
54
A
N
THR
39
A
O
ALA
104
A
O
ALA
90
A
O
ARG
107
A
O
ARG
93
A
N
GLU
86
A
N
GLU
72
B
O
HIS
13
B
O
HIS
96
B
N
VAL
20
B
N
VAL
103
B
O
THR
28
B
O
THR
111
B
N
ILE
37
B
N
ILE
120
1
A
CG
GLU
39
A
CG
GLU
24
0
Y
1
A
CD
GLU
39
A
CD
GLU
24
0
Y
1
A
OE1
GLU
39
A
OE1
GLU
24
0
Y
1
A
OE2
GLU
39
A
OE2
GLU
24
0
Y
1
A
CB
GLN
61
A
CB
GLN
46
0
Y
1
A
CG
GLN
61
A
CG
GLN
46
0
Y
1
A
CD
GLN
61
A
CD
GLN
46
0
Y
1
A
OE1
GLN
61
A
OE1
GLN
46
0
Y
1
A
NE2
GLN
61
A
NE2
GLN
46
0
Y
1
A
CB
LYS
62
A
CB
LYS
48
0
Y
1
A
CG
LYS
62
A
CG
LYS
48
0
Y
1
A
CD
LYS
62
A
CD
LYS
48
0
Y
1
A
CE
LYS
62
A
CE
LYS
48
0
Y
1
A
NZ
LYS
62
A
NZ
LYS
48
0
Y
1
A
CG
ARG
63
A
CG
ARG
49
0
Y
1
A
CD
ARG
63
A
CD
ARG
49
0
Y
1
A
NE
ARG
63
A
NE
ARG
49
0
Y
1
A
CZ
ARG
63
A
CZ
ARG
49
0
Y
1
A
NH1
ARG
63
A
NH1
ARG
49
0
Y
1
A
NH2
ARG
63
A
NH2
ARG
49
0
Y
1
A
CB
ARG
150
A
CB
ARG
138
0
Y
1
A
CG
ARG
150
A
CG
ARG
138
0
Y
1
A
CD
ARG
150
A
CD
ARG
138
0
Y
1
A
NE
ARG
150
A
NE
ARG
138
0
Y
1
A
CZ
ARG
150
A
CZ
ARG
138
0
Y
1
A
NH1
ARG
150
A
NH1
ARG
138
0
Y
1
A
NH2
ARG
150
A
NH2
ARG
138
0
Y
1
A
CG
LYS
243
A
CG
LYS
233
0
Y
1
A
CD
LYS
243
A
CD
LYS
233
0
Y
1
A
CE
LYS
243
A
CE
LYS
233
0
Y
1
A
NZ
LYS
243
A
NZ
LYS
233
0
Y
1
A
CB
THR
244
A
CB
THR
234
0
Y
1
A
OG1
THR
244
A
OG1
THR
234
0
Y
1
A
CG2
THR
244
A
CG2
THR
234
0
Y
1
B
CG
HIS
13
B
CG
HIS
96
0
Y
1
B
ND1
HIS
13
B
ND1
HIS
96
0
Y
1
B
CD2
HIS
13
B
CD2
HIS
96
0
Y
1
B
CE1
HIS
13
B
CE1
HIS
96
0
Y
1
B
NE2
HIS
13
B
NE2
HIS
96
0
Y
1
B
CG
GLU
15
B
CG
GLU
98
0
Y
1
B
CD
GLU
15
B
CD
GLU
98
0
Y
1
B
OE1
GLU
15
B
OE1
GLU
98
0
Y
1
B
OE2
GLU
15
B
OE2
GLU
98
0
Y
1
B
NE
ARG
25
B
NE
ARG
108
0
Y
1
B
CZ
ARG
25
B
CZ
ARG
108
0
Y
1
B
NH1
ARG
25
B
NH1
ARG
108
0
Y
1
B
NH2
ARG
25
B
NH2
ARG
108
0
Y
1
B
CG
GLU
50
B
CG
GLU
133
0
Y
1
B
CD
GLU
50
B
CD
GLU
133
0
Y
1
B
OE1
GLU
50
B
OE1
GLU
133
0
Y
1
B
OE2
GLU
50
B
OE2
GLU
133
0
Y
1
A
ARG
245
A
ARG
235
1
Y
1
A
GLY
246
A
GLY
236
1
Y
1
A
LEU
247
A
LEU
237
1
Y
1
A
PRO
248
A
PRO
238
1
Y
1
A
LYS
249
A
LYS
239
1
Y
1
A
ALA
250
A
ALA
240
1
Y
1
A
LYS
251
A
LYS
241
1
Y
1
A
SER
252
A
SER
242
1
Y
1
A
HIS
253
A
HIS
243
1
Y
1
A
ALA
254
A
ALA
244
1
Y
1
A
PRO
255
A
PRO
245
1
Y
1
A
GLU
256
A
GLU
246
1
Y
1
A
VAL
257
A
VAL
247
1
Y
1
A
ILE
258
A
ILE
248
1
Y
1
A
THR
259
A
THR
249
1
Y
1
A
SER
260
A
SER
250
1
Y
1
A
SER
261
A
SER
251
1
Y
1
A
PRO
262
A
PRO
252
1
Y
1
A
LEU
263
A
LEU
253
1
Y
1
A
LYS
264
A
LYS
254
1
Y
1
B
GLU
-82
B
GLU
1
1
Y
1
B
GLU
-81
B
GLU
2
1
Y
1
B
MET
-80
B
MET
3
1
Y
1
B
LYS
-79
B
LYS
4
1
Y
1
B
LYS
-78
B
LYS
5
1
Y
1
B
GLY
-77
B
GLY
6
1
Y
1
B
HIS
-76
B
HIS
7
1
Y
1
B
LEU
-75
B
LEU
8
1
Y
1
B
GLU
-74
B
GLU
9
1
Y
1
B
ARG
-73
B
ARG
10
1
Y
1
B
GLU
-72
B
GLU
11
1
Y
1
B
CYS
-71
B
CYS
12
1
Y
1
B
MET
-70
B
MET
13
1
Y
1
B
GLU
-69
B
GLU
14
1
Y
1
B
GLU
-68
B
GLU
15
1
Y
1
B
THR
-67
B
THR
16
1
Y
1
B
CYS
-66
B
CYS
17
1
Y
1
B
SER
-65
B
SER
18
1
Y
1
B
TYR
-64
B
TYR
19
1
Y
1
B
GLU
-63
B
GLU
20
1
Y
1
B
GLU
-62
B
GLU
21
1
Y
1
B
ALA
-61
B
ALA
22
1
Y
1
B
ARG
-60
B
ARG
23
1
Y
1
B
GLU
-59
B
GLU
24
1
Y
1
B
VAL
-58
B
VAL
25
1
Y
1
B
PHE
-57
B
PHE
26
1
Y
1
B
GLU
-56
B
GLU
27
1
Y
1
B
ASP
-55
B
ASP
28
1
Y
1
B
SER
-54
B
SER
29
1
Y
1
B
ASP
-53
B
ASP
30
1
Y
1
B
LYS
-52
B
LYS
31
1
Y
1
B
THR
-51
B
THR
32
1
Y
1
B
ASN
-50
B
ASN
33
1
Y
1
B
GLU
-49
B
GLU
34
1
Y
1
B
PHE
-48
B
PHE
35
1
Y
1
B
TRP
-47
B
TRP
36
1
Y
1
B
ASN
-46
B
ASN
37
1
Y
1
B
LYS
-45
B
LYS
38
1
Y
1
B
TYR
-44
B
TYR
39
1
Y
1
B
LYS
-43
B
LYS
40
1
Y
1
B
ASP
-42
B
ASP
41
1
Y
1
B
GLY
-41
B
GLY
42
1
Y
1
B
ASP
-40
B
ASP
43
1
Y
1
B
GLN
-39
B
GLN
44
1
Y
1
B
CYS
-38
B
CYS
45
1
Y
1
B
GLU
-37
B
GLU
46
1
Y
1
B
THR
-36
B
THR
47
1
Y
1
B
SER
-35
B
SER
48
1
Y
1
B
PRO
-34
B
PRO
49
1
Y
1
B
CYS
-33
B
CYS
50
1
Y
1
B
GLN
-32
B
GLN
51
1
Y
1
B
ASN
-31
B
ASN
52
1
Y
1
B
GLN
-30
B
GLN
53
1
Y
1
B
GLY
-29
B
GLY
54
1
Y
1
B
LYS
-28
B
LYS
55
1
Y
1
B
CYS
-27
B
CYS
56
1
Y
1
B
LYS
-26
B
LYS
57
1
Y
1
B
ASP
-25
B
ASP
58
1
Y
1
B
GLY
-24
B
GLY
59
1
Y
1
B
LEU
-23
B
LEU
60
1
Y
1
B
GLY
-22
B
GLY
61
1
Y
1
B
GLU
-21
B
GLU
62
1
Y
1
B
TYR
-20
B
TYR
63
1
Y
1
B
THR
-19
B
THR
64
1
Y
1
B
CYS
-18
B
CYS
65
1
Y
1
B
THR
-17
B
THR
66
1
Y
1
B
CYS
-16
B
CYS
67
1
Y
1
B
LEU
-15
B
LEU
68
1
Y
1
B
GLU
-14
B
GLU
69
1
Y
1
B
GLY
-13
B
GLY
70
1
Y
1
B
PHE
-12
B
PHE
71
1
Y
1
B
GLU
-11
B
GLU
72
1
Y
1
B
GLY
-10
B
GLY
73
1
Y
1
B
LYS
-9
B
LYS
74
1
Y
1
B
ASN
-8
B
ASN
75
1
Y
1
B
CYS
-7
B
CYS
76
1
Y
1
B
GLU
-6
B
GLU
77
1
Y
1
B
LEU
-5
B
LEU
78
1
Y
1
B
PHE
-4
B
PHE
79
1
Y
1
B
THR
-3
B
THR
80
1
Y
1
B
ARG
-2
B
ARG
81
1
Y
1
B
LYS
-1
B
LYS
82
1
Y
1
B
ARG
51
B
ARG
134
1
Y
1
A
SER
48
-168.85
-167.85
A
1
A
ALA
61
-173.72
146.28
1
A
GLN
75
-135.98
-150.88
1
A
ARG
115
-166.59
-168.53
1
A
ARG
125
-47.57
-70.61
1
A
ASP
189
178.07
149.89
1
A
SER
214
-105.45
-71.99
1
A
THR
232
-49.15
-18.51
1
B
ASP
4
-146.09
58.15
1
B
ASN
5
57.93
19.56
1
B
GLN
10
-126.50
-119.00
1
B
GLU
14
-94.96
44.87
1
B
LYS
34
-124.50
-50.02
0.267
0.208
0.208
2.20
20.00
1050
15119
15119
RANDOM
1
0.000
0
Engh & Huber
2.20
20.00
109
2371
35
0
2227
0.007
1.3
28.9
2.2
20.0
1EZQ
16708
15689
1.0
1.0
0.061
1
12.1
2.7
93.9
0.236
2.2
2.28
1380
2.52
91.8
data collection
MAR345
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
3.851
CRYSTAL STRUCTURE OF HUMAN COAGULATION FACTOR XA COMPLEXED WITH RPR128515
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
ALA
55
A
ALA
40
HELX_P
A
GLN
61
A
GLN
46
5
1
7
A
ASP
164
A
ASP
152
HELX_P
A
SER
172
A
SER
160
1
3
9
A
PHE
234
A
PHE
224
HELX_P
A
THR
244
A
THR
234
1
4
11
B
ASP
4
B
ASP
87
HELX_P
B
CYS
8
B
CYS
91
5
5
5
B
GLU
14
B
GLU
97
HELX_P
B
SER
18
B
SER
101
5
6
5
disulf
2.019
A
CYS
22
A
SG
CYS
7
1_555
A
CYS
27
A
SG
CYS
12
1_555
disulf
2.020
A
CYS
42
A
SG
CYS
27
1_555
A
CYS
58
A
SG
CYS
43
1_555
disulf
2.030
A
CYS
122
A
SG
CYS
108
1_555
B
CYS
44
B
SG
CYS
127
1_555
disulf
2.011
A
CYS
168
A
SG
CYS
156
1_555
A
CYS
182
A
SG
CYS
170
1_555
disulf
2.028
A
CYS
191
A
SG
CYS
181
1_555
A
CYS
220
A
SG
CYS
209
1_555
disulf
2.029
B
CYS
1
B
SG
CYS
84
1_555
B
CYS
12
B
SG
CYS
95
1_555
disulf
2.020
B
CYS
8
B
SG
CYS
91
1_555
B
CYS
21
B
SG
CYS
104
1_555
disulf
2.019
B
CYS
23
B
SG
CYS
106
1_555
B
CYS
36
B
SG
CYS
119
1_555
metalc
2.474
A
CA
1
C
CA
CA
1_555
A
ASP
70
A
OD1
ASP
56
1_555
metalc
2.491
A
CA
1
C
CA
CA
1_555
A
ASN
72
A
O
ASN
58
1_555
metalc
2.740
A
CA
1
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
metalc
2.949
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
metalc
2.582
A
CA
1
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
metalc
2.635
A
CA
1
C
CA
CA
1_555
A
HOH
285
E
O
HOH
1_555
metalc
2.771
A
CA
1
C
CA
CA
1_555
A
HOH
299
E
O
HOH
1_555
HYDROLASE
HYDROLASE
FA10_HUMAN
UNP
1
235
P00742
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT
FA10_HUMAN
UNP
2
128
P00742
LCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE
235
488
1EZQ
16
264
P00742
A
1
1
254
46
179
1EZQ
-82
51
P00742
B
2
1
134
7
7
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
20
A
GLN
5
A
GLU
21
A
GLU
6
A
LYS
156
A
LYS
144
A
PRO
161
A
PRO
149
A
THR
135
A
THR
124
A
GLY
140
A
GLY
129
A
PRO
198
A
PRO
188
A
PHE
203
A
PHE
193
A
THR
206
A
THR
196
A
TRP
215
A
TRP
205
A
GLY
226
A
GLY
216
A
LYS
230
A
LYS
220
A
MET
180
A
MET
168
A
ALA
183
A
ALA
171
A
ALA
81
A
ALA
67
A
HIS
83
A
HIS
69
A
PHE
64
A
PHE
50
A
VAL
68
A
VAL
54
A
GLN
30
A
GLN
15
A
ASN
35
A
ASN
20
A
GLY
40
A
GLY
25
A
ILE
46
A
ILE
31
A
TYR
51
A
TYR
36
A
THR
54
A
THR
39
A
ALA
104
A
ALA
90
A
LEU
108
A
LEU
94
A
VAL
85
A
VAL
71
A
LYS
90
A
LYS
76
B
PHE
11
B
PHE
94
B
HIS
13
B
HIS
96
B
VAL
20
B
VAL
103
B
SER
22
B
SER
105
B
TYR
27
B
TYR
110
B
LEU
29
B
LEU
112
B
CYS
36
B
CYS
119
B
PRO
38
B
PRO
121
BINDING SITE FOR RESIDUE CA A 1
A
CA
1
Software
6
BINDING SITE FOR RESIDUE RPR A 265
A
RPR
265
Software
17
A
ASP
70
A
ASP
56
6
1_555
A
ASN
72
A
ASN
58
6
1_555
A
GLN
75
A
GLN
61
6
1_555
A
GLU
80
A
GLU
66
6
1_555
A
HOH
285
E
HOH
6
1_555
A
HOH
299
E
HOH
6
1_555
A
GLU
97
A
GLU
83
17
1_555
A
THR
98
A
THR
84
17
1_555
A
TYR
99
A
TYR
85
17
1_555
A
GLU
147
A
GLU
135
17
1_555
A
PHE
174
A
PHE
162
17
1_555
A
ASP
189
A
ASP
179
17
1_555
A
ALA
190
A
ALA
180
17
1_555
A
CYS
191
A
CYS
181
17
1_555
A
GLN
192
A
GLN
182
17
1_555
A
SER
195
A
SER
185
17
1_555
A
TRP
215
A
TRP
205
17
1_555
A
GLY
216
A
GLY
206
17
1_555
A
GLU
217
A
GLU
207
17
1_555
A
GLY
219
A
GLY
208
17
1_555
A
CYS
220
A
CYS
209
17
1_555
A
GLY
226
A
GLY
216
17
1_555
A
HOH
336
E
HOH
17
1_555
19
P 21 21 21