1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Oh, D.
Shin, S.Y.
Lee, S.
Kim, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
11855
11864
10.1021/bi000453g
11009597
Role of the hinge region and the tryptophan residue in the synthetic antimicrobial peptides, cecropin A(1-8)-magainin 2(1-12) and its analogues, on their antibiotic activities and structures.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2280.903
CECROPIN A-MAGAININ 2 HYBRID PEPTIDE
GIG TO P IN MAGAININ SEGMENT
1
syn
polymer
no
yes
KWKLFKKIPKFLHSAKKF(NH2)
KWKLFKKIPKFLHSAKKFX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2000-06-14
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-03-14
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2000-05-16
REL
THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE FOR THIS PEPTIDE IS A HYBRID OF SEQUENCES WHICH OCCUR NATURALLY IN HYALOPHORA CECROPIA (CECROPIA MOTH) AND XENOPUS LAEVIS (AFRICAN CLAWED FROG)
sample
structures with the lowest energy
50
20
2D NOESY
4.78
298
K
Distance Geometry-Dynamical Simulated Annealing Hybrid Method
DODECYLPHOSPHOCHOLINE-d38 MICELLES
90% H2O/10% D2O
Brunger, A.T.
refinement
X-PLOR
3.851
400
Bruker
Avance
LYS
1
n
1
LYS
1
A
TRP
2
n
2
TRP
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
LYS
6
n
6
LYS
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
PRO
9
n
9
PRO
9
A
LYS
10
n
10
LYS
10
A
PHE
11
n
11
PHE
11
A
LEU
12
n
12
LEU
12
A
HIS
13
n
13
HIS
13
A
SER
14
n
14
SER
14
A
ALA
15
n
15
ALA
15
A
LYS
16
n
16
LYS
16
A
LYS
17
n
17
LYS
17
A
PHE
18
n
18
PHE
18
A
NH2
19
n
19
NH2
19
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
17
A
A
O
H
LYS
LYS
3
6
1.60
1
A
LYS
3
-164.98
66.33
1
A
ILE
8
-58.48
107.93
2
A
LYS
3
-100.71
-76.34
3
A
TRP
2
-152.16
-45.07
3
A
LYS
3
-140.64
51.40
4
A
TRP
2
-165.74
-130.57
4
A
LYS
3
-155.26
69.56
5
A
PRO
9
-76.82
48.17
6
A
LYS
3
-151.74
4.54
8
A
LYS
3
-163.15
83.42
9
A
LYS
3
-109.88
40.40
10
A
TRP
2
-152.67
-123.84
10
A
ILE
8
-51.88
106.03
11
A
LYS
3
-162.78
-35.53
11
A
LYS
17
-85.56
-92.37
12
A
TRP
2
-165.49
-32.00
12
A
LYS
3
-96.07
45.87
12
A
PRO
9
-68.54
3.28
13
A
TRP
2
-144.22
-143.49
13
A
PRO
9
-79.23
44.48
14
A
TRP
2
-165.36
101.51
14
A
LYS
3
-155.59
13.19
16
A
PHE
11
-72.19
-70.78
17
A
LYS
3
-127.41
-52.14
18
A
LYS
3
-93.07
44.37
19
A
TRP
2
-51.75
-174.20
19
A
LYS
3
-158.67
-47.74
20
A
TRP
2
-164.44
55.79
20
A
PRO
9
-73.51
-159.99
20
A
LYS
17
-85.47
-89.52
CECROPIN A-MAGAININ 2 HYBRID PEPTIDE
Cecropin A(1-8)-magainin 2(1-12) modified gig to P in dodecylphosphocholine micelles
1
N
N
A
LYS
3
A
LYS
3
HELX_P
A
ILE
8
A
ILE
8
1
1
6
A
ILE
8
A
ILE
8
HELX_P
A
LYS
17
A
LYS
17
1
2
10
covale
1.306
A
PHE
18
A
C
PHE
18
1_555
A
NH2
19
A
N
NH2
19
1_555
ANTIMICROBIAL PROTEIN
Helix-Turn-Helix, ANTIMICROBIAL PROTEIN
CECA_HYACE
UNP
1
P01507
MAGA_XENLA
UNP
1
P11006
27
34
1F0E
1
8
P01507
A
1
1
8
86
94
1F0E
10
18
P11006
A
2
10
18
1
ENGINEERED MUTATION
PRO
9
1F0E
A
P11006
UNP
9
BINDING SITE FOR RESIDUE NH2 A 19
Software
1
A
PHE
18
A
PHE
18
1
1_555
1
P 1