1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Oh, D.
Shin, S.Y.
Lee, S.
Kim, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
11855
11864
10.1021/bi000453g
11009597
Role of the hinge region and the tryptophan residue in the synthetic antimicrobial peptides, cecropin A(1-8)-magainin 2(1-12) and its analogues, on their antibiotic activities and structures.
2000
10.2210/pdb1f0f/pdb
pdb_00001f0f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
GIG DELETION IN THE MAGAININ SEGMENT OF THE HYBRID
2183.789
CECROPIN A-MAGAININ 2 HYBRID PEPTIDE
GIG DELETION IN MAGAININ SEGMENT
1
syn
polymer
no
yes
KWKLFKKIKFLHSAKKF(NH2)
KWKLFKKIKFLHSAKKFX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-06-14
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_spectrometer.model
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-05-16
REL
THIS PEPTIDE WAS CHEMICALLY SYNTHESIZED. THE SEQUENCE FOR THIS PEPTIDE IS A HYBRID OF SEQUENCES WHICH OCCUR NATURALLY IN HYALOPHORA CECROPIA (CECROPIA MOTH) AND XENOPUS LAEVIS (AFRICAN CLAWED FROG)
sample
structures with the lowest energy
50
20
2D NOESY
4.29
298
K
Distance Geometry-Dynamical Simulated Annealing Hybrid Method
DODECYLPHOSPHOCHOLINE-d38 MICELLES
90% H2O/10% D2O
Brunger, A.T.
refinement
X-PLOR
3.851
400
Bruker
AVANCE
LYS
1
n
1
LYS
1
A
TRP
2
n
2
TRP
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
LYS
6
n
6
LYS
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
LYS
9
n
9
LYS
9
A
PHE
10
n
10
PHE
10
A
LEU
11
n
11
LEU
11
A
HIS
12
n
12
HIS
12
A
SER
13
n
13
SER
13
A
ALA
14
n
14
ALA
14
A
LYS
15
n
15
LYS
15
A
LYS
16
n
16
LYS
16
A
PHE
17
n
17
PHE
17
A
NH2
18
n
18
NH2
18
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
13
A
A
O
H
LEU
LYS
4
7
1.53
1
A
TRP
2
-127.14
-57.80
1
A
LYS
3
-165.29
87.92
1
A
LYS
15
-64.07
-102.47
2
A
TRP
2
-148.46
-32.06
2
A
LYS
15
-56.01
-160.36
2
A
LYS
16
-42.83
166.14
3
A
TRP
2
-172.49
37.28
3
A
LYS
3
-111.04
50.07
3
A
LYS
15
-79.28
-88.01
5
A
TRP
2
67.70
165.10
5
A
LYS
3
-102.01
-167.21
5
A
LYS
15
-41.41
160.13
6
A
LYS
3
-109.43
63.20
6
A
LYS
15
-85.73
-83.85
6
A
LYS
16
-45.51
171.80
7
A
LYS
15
-44.95
157.14
8
A
TRP
2
-118.43
-144.43
8
A
LYS
15
-40.67
161.50
10
A
LYS
3
-45.52
100.80
11
A
TRP
2
-57.51
104.15
11
A
LYS
3
-154.56
53.00
11
A
LYS
16
-66.01
78.80
12
A
LYS
3
-50.38
174.55
12
A
LYS
15
-72.91
-70.23
13
A
TRP
2
-110.41
-158.75
13
A
LYS
15
-48.43
157.11
14
A
TRP
2
-125.70
-65.91
15
A
LYS
16
-46.82
175.04
16
A
LYS
3
-97.68
41.03
17
A
TRP
2
-69.47
-174.80
17
A
LYS
15
-76.96
-127.21
17
A
LYS
16
-58.24
170.62
18
A
TRP
2
47.93
-171.74
19
A
LYS
3
-164.46
-162.30
19
A
LYS
15
-47.07
158.91
20
A
TRP
2
-74.51
-158.86
20
A
LYS
3
-162.51
-168.78
20
A
LYS
15
-49.42
159.04
Cecropin A(1-8)-magainin 2(1-12) gig deletion modification in dodecylphosphocholine micelles
1
N
N
A
LEU
4
A
LEU
4
HELX_P
A
ALA
14
A
ALA
14
1
1
11
covale
1.304
both
A
PHE
17
A
C
PHE
17
1_555
A
NH2
18
A
N
NH2
18
1_555
ANTITUMOR PROTEIN
Helix, ANTITUMOR PROTEIN
CECA_HYACE
UNP
1
P01507
MAGA_XENLA
UNP
1
P11006
27
34
1F0F
1
8
P01507
A
1
1
8
86
94
1F0F
9
17
P11006
A
2
9
17
BINDING SITE FOR RESIDUE NH2 A 18
A
NH2
18
Software
1
A
PHE
17
A
PHE
17
1
1_555
1
P 1