0.017966
0.000000
0.000000
0.000000
0.013970
0.000000
0.000000
0.000000
0.012706
0.00000
0.00000
0.00000
Maignan, S.
Guilloteau, J.P.
Pouzieux, S.
Choi-Sledeski, Y.M.
Becker, M.R.
Klein, S.I.
Ewing, W.R.
Pauls, H.W.
Spada, A.P.
Mikol, V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
55.660
71.580
78.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C19 H17 N5 O3 S2
427.500
THIENO[3,2-B]PYRIDINE-2-SULFONIC ACID [2-OXO-1-(1H-PYRROLO[2,3-C]PYRIDIN-2-YLMETHYL)-PYRROLIDIN-3-YL]-AMIDE
RPR208707
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CA
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
Y
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
N
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
S
N
283
N
N
N
284
N
C
N
285
S
C
N
286
N
C
N
287
N
C
N
288
N
N
N
289
N
S
N
290
N
O
N
291
N
O
N
292
N
O
N
293
N
C
Y
294
N
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
N
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
N
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
C
N
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
N
342
N
O
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
R
C
N
356
N
O
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
N
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
N
424
N
C
N
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
Y
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
Y
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
Y
295
N
doub
Y
296
N
sing
Y
297
N
sing
Y
298
N
sing
Y
299
N
sing
Y
300
N
doub
N
301
N
sing
Y
302
N
sing
N
303
N
sing
Y
304
N
doub
N
305
N
sing
Y
306
N
doub
N
307
N
sing
Y
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
43
3226
3232
10.1021/jm000940u
10966741
Crystal structures of human factor Xa complexed with potent inhibitors.
2000
10.2210/pdb1f0s/pdb
pdb_00001f0s
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
95
1
IMAGE PLATE
1998-03-07
MAC Science DIP-2000
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
1.5418
ROTATING ANODE
ENRAF-NONIUS FR591
28550.596
COAGULATION FACTOR XA
3.4.21.6
ACTIVATED FACTOR XA, HEAVY CHAIN
1
nat
polymer
15210.793
COAGULATION FACTOR XA
3.4.21.6
FACTOR X LIGHT CHAIN
1
nat
polymer
chemical synthesis
40.078
CALCIUM ION
1
syn
non-polymer
427.500
THIENO[3,2-B]PYRIDINE-2-SULFONIC ACID [2-OXO-1-(1H-PYRROLO[2,3-C]PYRIDIN-2-YLMETHYL)-PYRROLIDIN-3-YL]-AMIDE
1
syn
non-polymer
18.015
water
147
nat
water
no
no
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKA
KSHAPEVITSSPLK
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKTRGLPKA
KSHAPEVITSSPLK
A
polypeptide(L)
no
no
EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT
RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER
EEMKKGHLERECMEETCSYEEAREVFEDSDKTNEFWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFT
RKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
human
Homo
sample
9606
Homo sapiens
1
VAPOR DIFFUSION, HANGING DROP
5.7
18-22%PEG 600, 50mM Mes-NaOH, pH 5.7, VAPOR DIFFUSION, HANGING DROP, temperature 292K
292
chem_comp_atom
chem_comp_bond
database_2
entity
pdbx_entity_src_syn
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Source and taxonomy
Structure summary
1
0
2000-09-20
1
1
2007-10-21
1
2
2011-07-13
1
3
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_entity.details
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
human coagulation factor Xa with inhibitor RPR128515
human coagulation factor Xa with inhibitor RPR208815
bovine pancreatic trypsin with inhibitor RPR131247
bovine pancreatic trypsin with inhibitor RPR128515
RCSB
Y
RCSB
2000-05-17
REL
REL
CA
CALCIUM ION
PR2
THIENO[3,2-B]PYRIDINE-2-SULFONIC ACID [2-OXO-1-(1H-PYRROLO[2,3-C]PYRIDIN-2-YLMETHYL)-PYRROLIDIN-3-YL]-AMIDE
HOH
water
Some residues in chains A and B are not seen
in the electron density.
Sequence database Residues 1-45 (the Gla domain)
were biochemically removed in chain B.
CA
1
3
CA
CA
301
A
RPR
1
4
PR2
PR2
401
A
HOH
1
5
HOH
HOH
402
A
HOH
2
5
HOH
HOH
403
A
HOH
3
5
HOH
HOH
404
A
HOH
4
5
HOH
HOH
405
A
HOH
5
5
HOH
HOH
406
A
HOH
6
5
HOH
HOH
407
A
HOH
7
5
HOH
HOH
408
A
HOH
8
5
HOH
HOH
409
A
HOH
9
5
HOH
HOH
410
A
HOH
10
5
HOH
HOH
411
A
HOH
11
5
HOH
HOH
412
A
HOH
12
5
HOH
HOH
413
A
HOH
13
5
HOH
HOH
414
A
HOH
14
5
HOH
HOH
415
A
HOH
15
5
HOH
HOH
416
A
HOH
16
5
HOH
HOH
417
A
HOH
17
5
HOH
HOH
418
A
HOH
18
5
HOH
HOH
419
A
HOH
19
5
HOH
HOH
420
A
HOH
21
5
HOH
HOH
421
A
HOH
22
5
HOH
HOH
422
A
HOH
24
5
HOH
HOH
423
A
HOH
25
5
HOH
HOH
424
A
HOH
26
5
HOH
HOH
425
A
HOH
27
5
HOH
HOH
426
A
HOH
28
5
HOH
HOH
427
A
HOH
29
5
HOH
HOH
428
A
HOH
30
5
HOH
HOH
429
A
HOH
31
5
HOH
HOH
430
A
HOH
32
5
HOH
HOH
431
A
HOH
33
5
HOH
HOH
432
A
HOH
34
5
HOH
HOH
433
A
HOH
36
5
HOH
HOH
434
A
HOH
38
5
HOH
HOH
435
A
HOH
39
5
HOH
HOH
436
A
HOH
40
5
HOH
HOH
437
A
HOH
41
5
HOH
HOH
438
A
HOH
42
5
HOH
HOH
439
A
HOH
44
5
HOH
HOH
440
A
HOH
46
5
HOH
HOH
441
A
HOH
47
5
HOH
HOH
442
A
HOH
48
5
HOH
HOH
443
A
HOH
49
5
HOH
HOH
444
A
HOH
50
5
HOH
HOH
445
A
HOH
51
5
HOH
HOH
446
A
HOH
52
5
HOH
HOH
447
A
HOH
54
5
HOH
HOH
448
A
HOH
55
5
HOH
HOH
449
A
HOH
57
5
HOH
HOH
450
A
HOH
58
5
HOH
HOH
451
A
HOH
59
5
HOH
HOH
452
A
HOH
60
5
HOH
HOH
453
A
HOH
61
5
HOH
HOH
454
A
HOH
62
5
HOH
HOH
455
A
HOH
64
5
HOH
HOH
456
A
HOH
65
5
HOH
HOH
457
A
HOH
67
5
HOH
HOH
458
A
HOH
68
5
HOH
HOH
459
A
HOH
69
5
HOH
HOH
460
A
HOH
70
5
HOH
HOH
461
A
HOH
72
5
HOH
HOH
462
A
HOH
73
5
HOH
HOH
463
A
HOH
74
5
HOH
HOH
464
A
HOH
75
5
HOH
HOH
465
A
HOH
76
5
HOH
HOH
466
A
HOH
77
5
HOH
HOH
467
A
HOH
80
5
HOH
HOH
468
A
HOH
81
5
HOH
HOH
469
A
HOH
82
5
HOH
HOH
470
A
HOH
84
5
HOH
HOH
471
A
HOH
85
5
HOH
HOH
472
A
HOH
86
5
HOH
HOH
473
A
HOH
87
5
HOH
HOH
474
A
HOH
89
5
HOH
HOH
475
A
HOH
90
5
HOH
HOH
476
A
HOH
92
5
HOH
HOH
477
A
HOH
93
5
HOH
HOH
478
A
HOH
94
5
HOH
HOH
479
A
HOH
95
5
HOH
HOH
480
A
HOH
97
5
HOH
HOH
481
A
HOH
98
5
HOH
HOH
482
A
HOH
101
5
HOH
HOH
483
A
HOH
102
5
HOH
HOH
484
A
HOH
103
5
HOH
HOH
485
A
HOH
105
5
HOH
HOH
486
A
HOH
109
5
HOH
HOH
487
A
HOH
110
5
HOH
HOH
488
A
HOH
112
5
HOH
HOH
489
A
HOH
114
5
HOH
HOH
490
A
HOH
115
5
HOH
HOH
491
A
HOH
117
5
HOH
HOH
492
A
HOH
118
5
HOH
HOH
493
A
HOH
119
5
HOH
HOH
494
A
HOH
120
5
HOH
HOH
495
A
HOH
124
5
HOH
HOH
496
A
HOH
125
5
HOH
HOH
497
A
HOH
126
5
HOH
HOH
498
A
HOH
127
5
HOH
HOH
499
A
HOH
129
5
HOH
HOH
500
A
HOH
135
5
HOH
HOH
501
A
HOH
136
5
HOH
HOH
502
A
HOH
137
5
HOH
HOH
503
A
HOH
138
5
HOH
HOH
504
A
HOH
140
5
HOH
HOH
505
A
HOH
141
5
HOH
HOH
506
A
HOH
142
5
HOH
HOH
507
A
HOH
143
5
HOH
HOH
508
A
HOH
144
5
HOH
HOH
509
A
HOH
147
5
HOH
HOH
510
A
HOH
20
5
HOH
HOH
52
B
HOH
23
5
HOH
HOH
53
B
HOH
35
5
HOH
HOH
54
B
HOH
37
5
HOH
HOH
55
B
HOH
43
5
HOH
HOH
56
B
HOH
45
5
HOH
HOH
57
B
HOH
53
5
HOH
HOH
58
B
HOH
56
5
HOH
HOH
59
B
HOH
63
5
HOH
HOH
60
B
HOH
66
5
HOH
HOH
61
B
HOH
71
5
HOH
HOH
62
B
HOH
78
5
HOH
HOH
63
B
HOH
79
5
HOH
HOH
64
B
HOH
83
5
HOH
HOH
65
B
HOH
88
5
HOH
HOH
66
B
HOH
91
5
HOH
HOH
67
B
HOH
96
5
HOH
HOH
68
B
HOH
99
5
HOH
HOH
69
B
HOH
100
5
HOH
HOH
70
B
HOH
104
5
HOH
HOH
71
B
HOH
106
5
HOH
HOH
72
B
HOH
107
5
HOH
HOH
73
B
HOH
108
5
HOH
HOH
74
B
HOH
111
5
HOH
HOH
75
B
HOH
113
5
HOH
HOH
76
B
HOH
116
5
HOH
HOH
77
B
HOH
121
5
HOH
HOH
78
B
HOH
122
5
HOH
HOH
79
B
HOH
123
5
HOH
HOH
80
B
HOH
128
5
HOH
HOH
81
B
HOH
130
5
HOH
HOH
82
B
HOH
131
5
HOH
HOH
83
B
HOH
132
5
HOH
HOH
84
B
HOH
133
5
HOH
HOH
85
B
HOH
134
5
HOH
HOH
86
B
HOH
139
5
HOH
HOH
87
B
HOH
145
5
HOH
HOH
88
B
HOH
146
5
HOH
HOH
89
B
ILE
16
n
1
ILE
16
A
VAL
17
n
2
VAL
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
GLN
20
n
5
GLN
20
A
GLU
21
n
6
GLU
21
A
CYS
22
n
7
CYS
22
A
LYS
23
n
8
LYS
23
A
ASP
24
n
9
ASP
24
A
GLY
25
n
10
GLY
25
A
GLU
26
n
11
GLU
26
A
CYS
27
n
12
CYS
27
A
PRO
28
n
13
PRO
28
A
TRP
29
n
14
TRP
29
A
GLN
30
n
15
GLN
30
A
ALA
31
n
16
ALA
31
A
LEU
32
n
17
LEU
32
A
LEU
33
n
18
LEU
33
A
ILE
34
n
19
ILE
34
A
ASN
35
n
20
ASN
35
A
GLU
36
n
21
GLU
36
A
GLU
37
n
22
GLU
37
A
ASN
38
n
23
ASN
38
A
GLU
39
n
24
GLU
39
A
GLY
40
n
25
GLY
40
A
PHE
41
n
26
PHE
41
A
CYS
42
n
27
CYS
42
A
GLY
43
n
28
GLY
43
A
GLY
44
n
29
GLY
44
A
THR
45
n
30
THR
45
A
ILE
46
n
31
ILE
46
A
LEU
47
n
32
LEU
47
A
SER
48
n
33
SER
48
A
GLU
49
n
34
GLU
49
A
PHE
50
n
35
PHE
50
A
TYR
51
n
36
TYR
51
A
ILE
52
n
37
ILE
52
A
LEU
53
n
38
LEU
53
A
THR
54
n
39
THR
54
A
ALA
55
n
40
ALA
55
A
ALA
56
n
41
ALA
56
A
HIS
57
n
42
HIS
57
A
CYS
58
n
43
CYS
58
A
LEU
59
n
44
LEU
59
A
TYR
60
n
45
TYR
60
A
GLN
61
n
46
GLN
61
A
ALA
61
n
47
A
ALA
61
A
LYS
62
n
48
LYS
62
A
ARG
63
n
49
ARG
63
A
PHE
64
n
50
PHE
64
A
LYS
65
n
51
LYS
65
A
VAL
66
n
52
VAL
66
A
ARG
67
n
53
ARG
67
A
VAL
68
n
54
VAL
68
A
GLY
69
n
55
GLY
69
A
ASP
70
n
56
ASP
70
A
ARG
71
n
57
ARG
71
A
ASN
72
n
58
ASN
72
A
THR
73
n
59
THR
73
A
GLU
74
n
60
GLU
74
A
GLN
75
n
61
GLN
75
A
GLU
76
n
62
GLU
76
A
GLU
77
n
63
GLU
77
A
GLY
78
n
64
GLY
78
A
GLY
79
n
65
GLY
79
A
GLU
80
n
66
GLU
80
A
ALA
81
n
67
ALA
81
A
VAL
82
n
68
VAL
82
A
HIS
83
n
69
HIS
83
A
GLU
84
n
70
GLU
84
A
VAL
85
n
71
VAL
85
A
GLU
86
n
72
GLU
86
A
VAL
87
n
73
VAL
87
A
VAL
88
n
74
VAL
88
A
ILE
89
n
75
ILE
89
A
LYS
90
n
76
LYS
90
A
HIS
91
n
77
HIS
91
A
ASN
92
n
78
ASN
92
A
ARG
93
n
79
ARG
93
A
PHE
94
n
80
PHE
94
A
THR
95
n
81
THR
95
A
LYS
96
n
82
LYS
96
A
GLU
97
n
83
GLU
97
A
THR
98
n
84
THR
98
A
TYR
99
n
85
TYR
99
A
ASP
100
n
86
ASP
100
A
PHE
101
n
87
PHE
101
A
ASP
102
n
88
ASP
102
A
ILE
103
n
89
ILE
103
A
ALA
104
n
90
ALA
104
A
VAL
105
n
91
VAL
105
A
LEU
106
n
92
LEU
106
A
ARG
107
n
93
ARG
107
A
LEU
108
n
94
LEU
108
A
LYS
109
n
95
LYS
109
A
THR
110
n
96
THR
110
A
PRO
111
n
97
PRO
111
A
ILE
112
n
98
ILE
112
A
THR
113
n
99
THR
113
A
PHE
114
n
100
PHE
114
A
ARG
115
n
101
ARG
115
A
MET
116
n
102
MET
116
A
ASN
117
n
103
ASN
117
A
VAL
118
n
104
VAL
118
A
ALA
119
n
105
ALA
119
A
PRO
120
n
106
PRO
120
A
ALA
121
n
107
ALA
121
A
CYS
122
n
108
CYS
122
A
LEU
123
n
109
LEU
123
A
PRO
124
n
110
A
PRO
124
A
GLU
124
n
111
GLU
124
A
ARG
125
n
112
ARG
125
A
ASP
126
n
113
ASP
126
A
TRP
127
n
114
TRP
127
A
ALA
128
n
115
ALA
128
A
GLU
129
n
116
GLU
129
A
SER
130
n
117
SER
130
A
THR
131
n
118
B
THR
131
A
LEU
131
n
119
A
LEU
131
A
MET
131
n
120
MET
131
A
THR
132
n
121
THR
132
A
GLN
133
n
122
GLN
133
A
LYS
134
n
123
LYS
134
A
THR
135
n
124
THR
135
A
GLY
136
n
125
GLY
136
A
ILE
137
n
126
ILE
137
A
VAL
138
n
127
VAL
138
A
SER
139
n
128
SER
139
A
GLY
140
n
129
GLY
140
A
PHE
141
n
130
PHE
141
A
GLY
142
n
131
GLY
142
A
ARG
143
n
132
ARG
143
A
THR
144
n
133
THR
144
A
HIS
145
n
134
HIS
145
A
GLU
147
n
135
GLU
147
A
LYS
148
n
136
LYS
148
A
GLY
149
n
137
GLY
149
A
ARG
150
n
138
ARG
150
A
GLN
151
n
139
GLN
151
A
SER
152
n
140
SER
152
A
THR
153
n
141
THR
153
A
ARG
154
n
142
ARG
154
A
LEU
155
n
143
LEU
155
A
LYS
156
n
144
LYS
156
A
MET
157
n
145
MET
157
A
LEU
158
n
146
LEU
158
A
GLU
159
n
147
GLU
159
A
VAL
160
n
148
VAL
160
A
PRO
161
n
149
PRO
161
A
TYR
162
n
150
TYR
162
A
VAL
163
n
151
VAL
163
A
ASP
164
n
152
ASP
164
A
ARG
165
n
153
ARG
165
A
ASN
166
n
154
ASN
166
A
SER
167
n
155
SER
167
A
CYS
168
n
156
CYS
168
A
LYS
169
n
157
LYS
169
A
LEU
170
n
158
LEU
170
A
SER
171
n
159
SER
171
A
SER
172
n
160
SER
172
A
SER
173
n
161
SER
173
A
PHE
174
n
162
PHE
174
A
ILE
175
n
163
ILE
175
A
ILE
176
n
164
ILE
176
A
THR
177
n
165
THR
177
A
GLN
178
n
166
GLN
178
A
ASN
179
n
167
ASN
179
A
MET
180
n
168
MET
180
A
PHE
181
n
169
PHE
181
A
CYS
182
n
170
CYS
182
A
ALA
183
n
171
ALA
183
A
GLY
184
n
172
GLY
184
A
TYR
185
n
173
TYR
185
A
ASP
185
n
174
A
ASP
185
A
THR
185
n
175
B
THR
185
A
LYS
186
n
176
LYS
186
A
GLN
187
n
177
GLN
187
A
GLU
188
n
178
GLU
188
A
ASP
189
n
179
ASP
189
A
ALA
190
n
180
ALA
190
A
CYS
191
n
181
CYS
191
A
GLN
192
n
182
GLN
192
A
GLY
193
n
183
GLY
193
A
ASP
194
n
184
ASP
194
A
SER
195
n
185
SER
195
A
GLY
196
n
186
GLY
196
A
GLY
197
n
187
GLY
197
A
PRO
198
n
188
PRO
198
A
HIS
199
n
189
HIS
199
A
VAL
200
n
190
VAL
200
A
THR
201
n
191
THR
201
A
ARG
202
n
192
ARG
202
A
PHE
203
n
193
PHE
203
A
LYS
204
n
194
LYS
204
A
ASP
205
n
195
ASP
205
A
THR
206
n
196
THR
206
A
TYR
207
n
197
TYR
207
A
PHE
208
n
198
PHE
208
A
VAL
209
n
199
VAL
209
A
THR
210
n
200
THR
210
A
GLY
211
n
201
GLY
211
A
ILE
212
n
202
ILE
212
A
VAL
213
n
203
VAL
213
A
SER
214
n
204
SER
214
A
TRP
215
n
205
TRP
215
A
GLY
216
n
206
GLY
216
A
GLU
217
n
207
GLU
217
A
GLY
219
n
208
GLY
219
A
CYS
220
n
209
CYS
220
A
ALA
221
n
210
ALA
221
A
ARG
222
n
211
ARG
222
A
LYS
223
n
212
LYS
223
A
GLY
223
n
213
A
GLY
223
A
LYS
224
n
214
LYS
224
A
TYR
225
n
215
TYR
225
A
GLY
226
n
216
GLY
226
A
ILE
227
n
217
ILE
227
A
TYR
228
n
218
TYR
228
A
THR
229
n
219
THR
229
A
LYS
230
n
220
LYS
230
A
VAL
231
n
221
VAL
231
A
THR
232
n
222
THR
232
A
ALA
233
n
223
ALA
233
A
PHE
234
n
224
PHE
234
A
LEU
235
n
225
LEU
235
A
LYS
236
n
226
LYS
236
A
TRP
237
n
227
TRP
237
A
ILE
238
n
228
ILE
238
A
ASP
239
n
229
ASP
239
A
ARG
240
n
230
ARG
240
A
SER
241
n
231
SER
241
A
MET
242
n
232
MET
242
A
LYS
243
n
233
LYS
243
A
THR
244
n
234
THR
244
A
n
235
245
A
n
236
246
A
n
237
247
A
n
238
248
A
n
239
249
A
n
240
250
A
n
241
251
A
n
242
252
A
n
243
253
A
n
244
254
A
n
245
255
A
n
246
256
A
n
247
257
A
n
248
258
A
n
249
259
A
n
250
260
A
n
251
261
A
n
252
262
A
n
253
263
A
n
254
264
A
n
1
-82
B
n
2
-81
B
n
3
-80
B
n
4
-79
B
n
5
-78
B
n
6
-77
B
n
7
-76
B
n
8
-75
B
n
9
-74
B
n
10
-73
B
n
11
-72
B
n
12
-71
B
n
13
-70
B
n
14
-69
B
n
15
-68
B
n
16
-67
B
n
17
-66
B
n
18
-65
B
n
19
-64
B
n
20
-63
B
n
21
-62
B
n
22
-61
B
n
23
-60
B
n
24
-59
B
n
25
-58
B
n
26
-57
B
n
27
-56
B
n
28
-55
B
n
29
-54
B
n
30
-53
B
n
31
-52
B
n
32
-51
B
n
33
-50
B
n
34
-49
B
n
35
-48
B
n
36
-47
B
n
37
-46
B
n
38
-45
B
n
39
-44
B
n
40
-43
B
n
41
-42
B
n
42
-41
B
n
43
-40
B
n
44
-39
B
n
45
-38
B
n
46
-37
B
n
47
-36
B
n
48
-35
B
n
49
-34
B
n
50
-33
B
n
51
-32
B
n
52
-31
B
n
53
-30
B
n
54
-29
B
n
55
-28
B
n
56
-27
B
n
57
-26
B
n
58
-25
B
n
59
-24
B
n
60
-23
B
n
61
-22
B
n
62
-21
B
n
63
-20
B
n
64
-19
B
n
65
-18
B
n
66
-17
B
n
67
-16
B
n
68
-15
B
n
69
-14
B
n
70
-13
B
n
71
-12
B
n
72
-11
B
n
73
-10
B
n
74
-9
B
n
75
-8
B
n
76
-7
B
n
77
-6
B
n
78
-5
B
n
79
-4
B
n
80
-3
B
n
81
-2
B
n
82
-1
B
LEU
0
n
83
LEU
0
B
CYS
1
n
84
CYS
1
B
SER
2
n
85
SER
2
B
LEU
3
n
86
LEU
3
B
ASP
4
n
87
ASP
4
B
ASN
5
n
88
ASN
5
B
GLY
6
n
89
GLY
6
B
ASP
7
n
90
ASP
7
B
CYS
8
n
91
CYS
8
B
ASP
9
n
92
ASP
9
B
GLN
10
n
93
GLN
10
B
PHE
11
n
94
PHE
11
B
CYS
12
n
95
CYS
12
B
HIS
13
n
96
HIS
13
B
GLU
14
n
97
GLU
14
B
GLU
15
n
98
GLU
15
B
GLN
16
n
99
GLN
16
B
ASN
17
n
100
ASN
17
B
SER
18
n
101
SER
18
B
VAL
19
n
102
VAL
19
B
VAL
20
n
103
VAL
20
B
CYS
21
n
104
CYS
21
B
SER
22
n
105
SER
22
B
CYS
23
n
106
CYS
23
B
ALA
24
n
107
ALA
24
B
ARG
25
n
108
ARG
25
B
GLY
26
n
109
GLY
26
B
TYR
27
n
110
TYR
27
B
THR
28
n
111
THR
28
B
LEU
29
n
112
LEU
29
B
ALA
30
n
113
ALA
30
B
ASP
31
n
114
ASP
31
B
ASN
32
n
115
ASN
32
B
GLY
33
n
116
GLY
33
B
LYS
34
n
117
LYS
34
B
ALA
35
n
118
ALA
35
B
CYS
36
n
119
CYS
36
B
ILE
37
n
120
ILE
37
B
PRO
38
n
121
PRO
38
B
THR
39
n
122
THR
39
B
GLY
40
n
123
GLY
40
B
PRO
41
n
124
PRO
41
B
TYR
42
n
125
TYR
42
B
PRO
43
n
126
PRO
43
B
CYS
44
n
127
CYS
44
B
GLY
45
n
128
GLY
45
B
LYS
46
n
129
LYS
46
B
GLN
47
n
130
GLN
47
B
THR
48
n
131
THR
48
B
LEU
49
n
132
LEU
49
B
GLU
50
n
133
GLU
50
B
n
134
51
B
author_defined_assembly
2
dimeric
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
A
ASN
72
A
O
ASN
58
1_555
98.8
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
177.8
A
ASN
72
A
O
ASN
58
1_555
A
CA
301
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
81.0
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
96.4
A
ASN
72
A
O
ASN
58
1_555
A
CA
301
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
163.4
A
GLN
75
A
O
GLN
61
1_555
A
CA
301
C
CA
CA
1_555
A
GLU
80
A
OE1
GLU
66
1_555
83.5
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
468
E
O
HOH
1_555
95.3
A
ASN
72
A
O
ASN
58
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
468
E
O
HOH
1_555
99.9
A
GLN
75
A
O
GLN
61
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
468
E
O
HOH
1_555
86.8
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
468
E
O
HOH
1_555
85.0
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
76.8
A
ASN
72
A
O
ASN
58
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
96.2
A
GLN
75
A
O
GLN
61
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
101.0
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
81.0
A
HOH
468
E
O
HOH
1_555
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
163.0
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLN
20
A
O
GLN
5
A
N
MET
157
A
N
MET
145
A
N
VAL
160
A
N
VAL
148
A
O
GLY
136
A
O
GLY
125
A
N
SER
139
A
N
SER
128
A
O
PRO
198
A
O
PRO
188
A
N
THR
201
A
N
THR
191
A
O
PHE
208
A
O
PHE
198
A
O
TRP
215
A
O
TRP
205
A
N
ILE
227
A
N
ILE
217
A
N
TYR
228
A
N
TYR
218
A
O
PHE
181
A
O
PHE
169
A
O
LEU
33
A
O
LEU
18
A
N
PHE
41
A
N
PHE
26
A
O
THR
45
A
O
THR
30
A
N
LEU
53
A
N
LEU
38
A
N
THR
54
A
N
THR
39
A
O
ALA
104
A
O
ALA
90
A
O
ARG
107
A
O
ARG
93
A
N
GLU
86
A
N
GLU
72
A
N
VAL
85
A
N
VAL
71
A
O
PHE
64
A
O
PHE
50
A
N
ARG
67
A
N
ARG
53
A
O
LEU
32
A
O
LEU
17
B
O
GLU
15
B
O
GLU
98
B
N
SER
18
B
N
SER
101
B
O
THR
28
B
O
THR
111
B
N
ILE
37
B
N
ILE
120
1
A
CG
GLU
39
A
CG
GLU
24
0
Y
1
A
CD
GLU
39
A
CD
GLU
24
0
Y
1
A
OE1
GLU
39
A
OE1
GLU
24
0
Y
1
A
OE2
GLU
39
A
OE2
GLU
24
0
Y
1
A
CD1
TYR
60
A
CD1
TYR
45
0
Y
1
A
CD2
TYR
60
A
CD2
TYR
45
0
Y
1
A
CE1
TYR
60
A
CE1
TYR
45
0
Y
1
A
CE2
TYR
60
A
CE2
TYR
45
0
Y
1
A
CZ
TYR
60
A
CZ
TYR
45
0
Y
1
A
OH
TYR
60
A
OH
TYR
45
0
Y
1
A
CB
LYS
62
A
CB
LYS
48
0
Y
1
A
CG
LYS
62
A
CG
LYS
48
0
Y
1
A
CD
LYS
62
A
CD
LYS
48
0
Y
1
A
CE
LYS
62
A
CE
LYS
48
0
Y
1
A
NZ
LYS
62
A
NZ
LYS
48
0
Y
1
A
CG
ARG
63
A
CG
ARG
49
0
Y
1
A
CD
ARG
63
A
CD
ARG
49
0
Y
1
A
NE
ARG
63
A
NE
ARG
49
0
Y
1
A
CZ
ARG
63
A
CZ
ARG
49
0
Y
1
A
NH1
ARG
63
A
NH1
ARG
49
0
Y
1
A
NH2
ARG
63
A
NH2
ARG
49
0
Y
1
A
CG
GLN
75
A
CG
GLN
61
0
Y
1
A
CD
GLN
75
A
CD
GLN
61
0
Y
1
A
OE1
GLN
75
A
OE1
GLN
61
0
Y
1
A
NE2
GLN
75
A
NE2
GLN
61
0
Y
1
A
CG
GLU
76
A
CG
GLU
62
0
Y
1
A
CD
GLU
76
A
CD
GLU
62
0
Y
1
A
OE1
GLU
76
A
OE1
GLU
62
0
Y
1
A
OE2
GLU
76
A
OE2
GLU
62
0
Y
1
A
CG
GLU
77
A
CG
GLU
63
0
Y
1
A
CD
GLU
77
A
CD
GLU
63
0
Y
1
A
OE1
GLU
77
A
OE1
GLU
63
0
Y
1
A
OE2
GLU
77
A
OE2
GLU
63
0
Y
1
A
CD
LYS
96
A
CD
LYS
82
0
Y
1
A
CE
LYS
96
A
CE
LYS
82
0
Y
1
A
NZ
LYS
96
A
NZ
LYS
82
0
Y
1
A
CB
GLU
97
A
CB
GLU
83
0
Y
1
A
CG
GLU
97
A
CG
GLU
83
0
Y
1
A
CD
GLU
97
A
CD
GLU
83
0
Y
1
A
OE1
GLU
97
A
OE1
GLU
83
0
Y
1
A
OE2
GLU
97
A
OE2
GLU
83
0
Y
1
A
CD
LYS
134
A
CD
LYS
123
0
Y
1
A
CE
LYS
134
A
CE
LYS
123
0
Y
1
A
NZ
LYS
134
A
NZ
LYS
123
0
Y
1
A
CB
ARG
150
A
CB
ARG
138
0
Y
1
A
CG
ARG
150
A
CG
ARG
138
0
Y
1
A
CD
ARG
150
A
CD
ARG
138
0
Y
1
A
NE
ARG
150
A
NE
ARG
138
0
Y
1
A
CZ
ARG
150
A
CZ
ARG
138
0
Y
1
A
NH1
ARG
150
A
NH1
ARG
138
0
Y
1
A
NH2
ARG
150
A
NH2
ARG
138
0
Y
1
A
CD
LYS
223
A
CD
LYS
212
0
Y
1
A
CE
LYS
223
A
CE
LYS
212
0
Y
1
A
NZ
LYS
223
A
NZ
LYS
212
0
Y
1
A
CD
LYS
236
A
CD
LYS
226
0
Y
1
A
CE
LYS
236
A
CE
LYS
226
0
Y
1
A
NZ
LYS
236
A
NZ
LYS
226
0
Y
1
A
CG
LYS
243
A
CG
LYS
233
0
Y
1
A
CD
LYS
243
A
CD
LYS
233
0
Y
1
A
CE
LYS
243
A
CE
LYS
233
0
Y
1
A
NZ
LYS
243
A
NZ
LYS
233
0
Y
1
A
CB
THR
244
A
CB
THR
234
0
Y
1
A
OG1
THR
244
A
OG1
THR
234
0
Y
1
A
CG2
THR
244
A
CG2
THR
234
0
Y
1
B
CG
HIS
13
B
CG
HIS
96
0
Y
1
B
ND1
HIS
13
B
ND1
HIS
96
0
Y
1
B
CD2
HIS
13
B
CD2
HIS
96
0
Y
1
B
CE1
HIS
13
B
CE1
HIS
96
0
Y
1
B
NE2
HIS
13
B
NE2
HIS
96
0
Y
1
B
CG
GLU
15
B
CG
GLU
98
0
Y
1
B
CD
GLU
15
B
CD
GLU
98
0
Y
1
B
OE1
GLU
15
B
OE1
GLU
98
0
Y
1
B
OE2
GLU
15
B
OE2
GLU
98
0
Y
1
B
CB
GLN
16
B
CB
GLN
99
0
Y
1
B
CG
GLN
16
B
CG
GLN
99
0
Y
1
B
CD
GLN
16
B
CD
GLN
99
0
Y
1
B
OE1
GLN
16
B
OE1
GLN
99
0
Y
1
B
NE2
GLN
16
B
NE2
GLN
99
0
Y
1
B
NE
ARG
25
B
NE
ARG
108
0
Y
1
B
CZ
ARG
25
B
CZ
ARG
108
0
Y
1
B
NH1
ARG
25
B
NH1
ARG
108
0
Y
1
B
NH2
ARG
25
B
NH2
ARG
108
0
Y
1
B
CG
GLU
50
B
CG
GLU
133
0
Y
1
B
CD
GLU
50
B
CD
GLU
133
0
Y
1
B
OE1
GLU
50
B
OE1
GLU
133
0
Y
1
B
OE2
GLU
50
B
OE2
GLU
133
0
Y
1
A
GLN
61
A
GLN
46
0
Y
1
A
ARG
245
A
ARG
235
1
Y
1
A
GLY
246
A
GLY
236
1
Y
1
A
LEU
247
A
LEU
237
1
Y
1
A
PRO
248
A
PRO
238
1
Y
1
A
LYS
249
A
LYS
239
1
Y
1
A
ALA
250
A
ALA
240
1
Y
1
A
LYS
251
A
LYS
241
1
Y
1
A
SER
252
A
SER
242
1
Y
1
A
HIS
253
A
HIS
243
1
Y
1
A
ALA
254
A
ALA
244
1
Y
1
A
PRO
255
A
PRO
245
1
Y
1
A
GLU
256
A
GLU
246
1
Y
1
A
VAL
257
A
VAL
247
1
Y
1
A
ILE
258
A
ILE
248
1
Y
1
A
THR
259
A
THR
249
1
Y
1
A
SER
260
A
SER
250
1
Y
1
A
SER
261
A
SER
251
1
Y
1
A
PRO
262
A
PRO
252
1
Y
1
A
LEU
263
A
LEU
253
1
Y
1
A
LYS
264
A
LYS
254
1
Y
1
B
GLU
-82
B
GLU
1
1
Y
1
B
GLU
-81
B
GLU
2
1
Y
1
B
MET
-80
B
MET
3
1
Y
1
B
LYS
-79
B
LYS
4
1
Y
1
B
LYS
-78
B
LYS
5
1
Y
1
B
GLY
-77
B
GLY
6
1
Y
1
B
HIS
-76
B
HIS
7
1
Y
1
B
LEU
-75
B
LEU
8
1
Y
1
B
GLU
-74
B
GLU
9
1
Y
1
B
ARG
-73
B
ARG
10
1
Y
1
B
GLU
-72
B
GLU
11
1
Y
1
B
CYS
-71
B
CYS
12
1
Y
1
B
MET
-70
B
MET
13
1
Y
1
B
GLU
-69
B
GLU
14
1
Y
1
B
GLU
-68
B
GLU
15
1
Y
1
B
THR
-67
B
THR
16
1
Y
1
B
CYS
-66
B
CYS
17
1
Y
1
B
SER
-65
B
SER
18
1
Y
1
B
TYR
-64
B
TYR
19
1
Y
1
B
GLU
-63
B
GLU
20
1
Y
1
B
GLU
-62
B
GLU
21
1
Y
1
B
ALA
-61
B
ALA
22
1
Y
1
B
ARG
-60
B
ARG
23
1
Y
1
B
GLU
-59
B
GLU
24
1
Y
1
B
VAL
-58
B
VAL
25
1
Y
1
B
PHE
-57
B
PHE
26
1
Y
1
B
GLU
-56
B
GLU
27
1
Y
1
B
ASP
-55
B
ASP
28
1
Y
1
B
SER
-54
B
SER
29
1
Y
1
B
ASP
-53
B
ASP
30
1
Y
1
B
LYS
-52
B
LYS
31
1
Y
1
B
THR
-51
B
THR
32
1
Y
1
B
ASN
-50
B
ASN
33
1
Y
1
B
GLU
-49
B
GLU
34
1
Y
1
B
PHE
-48
B
PHE
35
1
Y
1
B
TRP
-47
B
TRP
36
1
Y
1
B
ASN
-46
B
ASN
37
1
Y
1
B
LYS
-45
B
LYS
38
1
Y
1
B
TYR
-44
B
TYR
39
1
Y
1
B
LYS
-43
B
LYS
40
1
Y
1
B
ASP
-42
B
ASP
41
1
Y
1
B
GLY
-41
B
GLY
42
1
Y
1
B
ASP
-40
B
ASP
43
1
Y
1
B
GLN
-39
B
GLN
44
1
Y
1
B
CYS
-38
B
CYS
45
1
Y
1
B
GLU
-37
B
GLU
46
1
Y
1
B
THR
-36
B
THR
47
1
Y
1
B
SER
-35
B
SER
48
1
Y
1
B
PRO
-34
B
PRO
49
1
Y
1
B
CYS
-33
B
CYS
50
1
Y
1
B
GLN
-32
B
GLN
51
1
Y
1
B
ASN
-31
B
ASN
52
1
Y
1
B
GLN
-30
B
GLN
53
1
Y
1
B
GLY
-29
B
GLY
54
1
Y
1
B
LYS
-28
B
LYS
55
1
Y
1
B
CYS
-27
B
CYS
56
1
Y
1
B
LYS
-26
B
LYS
57
1
Y
1
B
ASP
-25
B
ASP
58
1
Y
1
B
GLY
-24
B
GLY
59
1
Y
1
B
LEU
-23
B
LEU
60
1
Y
1
B
GLY
-22
B
GLY
61
1
Y
1
B
GLU
-21
B
GLU
62
1
Y
1
B
TYR
-20
B
TYR
63
1
Y
1
B
THR
-19
B
THR
64
1
Y
1
B
CYS
-18
B
CYS
65
1
Y
1
B
THR
-17
B
THR
66
1
Y
1
B
CYS
-16
B
CYS
67
1
Y
1
B
LEU
-15
B
LEU
68
1
Y
1
B
GLU
-14
B
GLU
69
1
Y
1
B
GLY
-13
B
GLY
70
1
Y
1
B
PHE
-12
B
PHE
71
1
Y
1
B
GLU
-11
B
GLU
72
1
Y
1
B
GLY
-10
B
GLY
73
1
Y
1
B
LYS
-9
B
LYS
74
1
Y
1
B
ASN
-8
B
ASN
75
1
Y
1
B
CYS
-7
B
CYS
76
1
Y
1
B
GLU
-6
B
GLU
77
1
Y
1
B
LEU
-5
B
LEU
78
1
Y
1
B
PHE
-4
B
PHE
79
1
Y
1
B
THR
-3
B
THR
80
1
Y
1
B
ARG
-2
B
ARG
81
1
Y
1
B
LYS
-1
B
LYS
82
1
Y
1
B
ARG
51
B
ARG
134
1
Y
1
A
ASP
24
-38.11
118.41
1
A
THR
73
-61.73
7.56
1
A
GLN
75
-176.06
100.67
1
A
GLU
76
-57.89
97.84
1
A
ARG
115
-164.90
-165.47
1
A
ASP
189
176.58
154.35
1
A
ALA
190
-64.48
-176.78
1
A
SER
214
-105.76
-69.13
1
B
GLN
10
-129.80
-115.17
1
B
LYS
34
-122.17
-52.66
0.2628
0.2162
0.2162
2.10
20.00
1150
16710
16710
RANDOM
1
0.000
0.0
Engh & Huber
2.10
20.00
147
2404
30
0
2227
0.008
1.249
27.314
2.1
20.0
1F0S
17166
17166
1.0
1.0
0.084
1
90.5
0.192
2.1
2.17
68.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
98.0
Crystal Structure of Human Coagulation Factor XA Complexed with RPR208707
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
The biological assembly is constructed from chain A and B linked through a disulfide bridge
A
ALA
55
A
ALA
40
HELX_P
A
GLN
61
A
GLN
46
5
1
7
A
ASP
164
A
ASP
152
HELX_P
A
SER
172
A
SER
160
1
3
9
A
PHE
234
A
PHE
224
HELX_P
A
MET
242
A
MET
232
1
4
9
B
LEU
3
B
LEU
86
HELX_P
B
CYS
8
B
CYS
91
5
5
6
disulf
2.020
A
CYS
22
A
SG
CYS
7
1_555
A
CYS
27
A
SG
CYS
12
1_555
disulf
2.029
A
CYS
42
A
SG
CYS
27
1_555
A
CYS
58
A
SG
CYS
43
1_555
disulf
2.032
A
CYS
122
A
SG
CYS
108
1_555
B
CYS
44
B
SG
CYS
127
1_555
disulf
2.011
A
CYS
168
A
SG
CYS
156
1_555
A
CYS
182
A
SG
CYS
170
1_555
disulf
2.033
A
CYS
191
A
SG
CYS
181
1_555
A
CYS
220
A
SG
CYS
209
1_555
disulf
2.029
B
CYS
1
B
SG
CYS
84
1_555
B
CYS
12
B
SG
CYS
95
1_555
disulf
2.019
B
CYS
8
B
SG
CYS
91
1_555
B
CYS
21
B
SG
CYS
104
1_555
disulf
2.024
B
CYS
23
B
SG
CYS
106
1_555
B
CYS
36
B
SG
CYS
119
1_555
metalc
2.524
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.445
A
ASN
72
A
O
ASN
58
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.858
A
GLN
75
A
O
GLN
61
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.372
A
GLU
80
A
OE1
GLU
66
1_555
A
CA
301
C
CA
CA
1_555
metalc
2.555
A
CA
301
C
CA
CA
1_555
A
HOH
468
E
O
HOH
1_555
metalc
2.709
A
CA
301
C
CA
CA
1_555
A
HOH
488
E
O
HOH
1_555
HYDROLASE
Protein-inhibitor complex, HYDROLASE
FA10_HUMAN
UNP
1
235
P00742
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT
FA10_HUMAN
UNP
2
128
P00742
LCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE
235
488
1F0S
16
264
P00742
A
1
1
254
46
179
1F0S
-82
51
P00742
B
2
1
134
7
7
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
20
A
GLN
5
A
GLU
21
A
GLU
6
A
LYS
156
A
LYS
144
A
PRO
161
A
PRO
149
A
THR
135
A
THR
124
A
GLY
140
A
GLY
129
A
PRO
198
A
PRO
188
A
ARG
202
A
ARG
192
A
TYR
207
A
TYR
197
A
GLY
216
A
GLY
206
A
GLY
226
A
GLY
216
A
LYS
230
A
LYS
220
A
MET
180
A
MET
168
A
ALA
183
A
ALA
171
A
GLN
30
A
GLN
15
A
ASN
35
A
ASN
20
A
GLY
40
A
GLY
25
A
ILE
46
A
ILE
31
A
TYR
51
A
TYR
36
A
THR
54
A
THR
39
A
ALA
104
A
ALA
90
A
LEU
108
A
LEU
94
A
ALA
81
A
ALA
67
A
LYS
90
A
LYS
76
A
PHE
64
A
PHE
50
A
VAL
68
A
VAL
54
A
GLN
30
A
GLN
15
A
ASN
35
A
ASN
20
B
PHE
11
B
PHE
94
B
GLU
15
B
GLU
98
B
SER
18
B
SER
101
B
SER
22
B
SER
105
B
TYR
27
B
TYR
110
B
LEU
29
B
LEU
112
B
CYS
36
B
CYS
119
B
PRO
38
B
PRO
121
BINDING SITE FOR RESIDUE CA A 301
A
CA
301
Software
6
BINDING SITE FOR RESIDUE PR2 A 401
A
PR2
401
Software
14
A
ASP
70
A
ASP
56
6
1_555
A
ASN
72
A
ASN
58
6
1_555
A
GLN
75
A
GLN
61
6
1_555
A
GLU
80
A
GLU
66
6
1_555
A
HOH
468
E
HOH
6
1_555
A
HOH
488
E
HOH
6
1_555
A
GLU
97
A
GLU
83
14
1_555
A
TYR
99
A
TYR
85
14
1_555
A
PHE
174
A
PHE
162
14
1_555
A
ALA
190
A
ALA
180
14
1_555
A
CYS
191
A
CYS
181
14
1_555
A
GLN
192
A
GLN
182
14
1_555
A
SER
195
A
SER
185
14
1_555
A
VAL
213
A
VAL
203
14
1_555
A
TRP
215
A
TRP
205
14
1_555
A
GLY
216
A
GLY
206
14
1_555
A
GLU
217
A
GLU
207
14
1_555
A
GLY
219
A
GLY
208
14
1_555
A
CYS
220
A
CYS
209
14
1_555
A
HOH
452
E
HOH
14
1_555
19
P 21 21 21