0.008439 0.004872 0.000000 0.000000 0.009744 0.000000 0.000000 0.000000 0.013624 0.00000 0.00000 0.00000 Hart, P.J. Ogihara, N.L. Liu, H. Nersissian, A.M. Valentine, J.S. Eisenberg, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 118.5 118.5 73.4 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cu 2 63.546 COPPER (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Biochemistry BICHAW 0033 0006-2960 38 2167 2178 10.1021/bi982284u 10026301 A structure-based mechanism for copper-zinc superoxide dismutase. 1999 10.2210/pdb1f18/pdb pdb_00001f18 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 93 1 IMAGE PLATE RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 15974.729 COPPER-ZINC SUPEROXIDE DISMUTASE 1.15.1.1 G85R 1 man polymer 63.546 COPPER (II) ION 1 syn non-polymer 65.409 ZINC ION 1 syn non-polymer 18.015 water 162 nat water CUZNSOD no no MVQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVR HVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGLTN MVQAVAVLKGDAGVSGVVKFEQASESEPTTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVR HVGDMRNVKTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVIGLTN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n baker's yeast Saccharomyces Escherichia Escherichia coli sample CYTOPLASM 4932 Saccharomyces cerevisiae 511693 Escherichia coli BL21 BL21 PET3D 1 3.10 60.36 VAPOR DIFFUSION, HANGING DROP 7.7 Ammonium Sulfate, Tris-HCl, NaCl, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 275K 275 software database_2 struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Database references Refinement description Database references Derived calculations 1 0 2002-12-18 1 1 2007-10-16 1 2 2011-07-13 1 3 2014-02-05 1 4 2017-10-04 1 5 2021-11-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id yeast wild type CuZnSOD (room temperature) yeast wild type CuZnSOD (277K) yeast wild type CuZnSOD (15 atm oxygen) yeast wild type CuZnSOD (azide bound form) yeast H48C CuZnSOD mutant human G37R FALS mutant CuZnSOD yeast H48Q CuZnSOD FALS mutant analog yeast H46C CuZnSOD Mutant yeast CuZnSOD exposed to Nitric Oxide RCSB Y RCSB 2000-05-18 REL REL CU COPPER (II) ION ZN ZINC ION HOH water CU 154 2 CU CU 154 A ZN 155 3 ZN ZN 155 A WAT 201 4 HOH HOH 201 A WAT 202 4 HOH HOH 202 A WAT 203 4 HOH HOH 203 A WAT 204 4 HOH HOH 204 A WAT 205 4 HOH HOH 205 A WAT 206 4 HOH HOH 206 A WAT 207 4 HOH HOH 207 A WAT 208 4 HOH HOH 208 A WAT 209 4 HOH HOH 209 A WAT 210 4 HOH HOH 210 A WAT 211 4 HOH HOH 211 A WAT 212 4 HOH HOH 212 A WAT 213 4 HOH HOH 213 A WAT 214 4 HOH HOH 214 A WAT 215 4 HOH HOH 215 A WAT 216 4 HOH HOH 216 A WAT 217 4 HOH HOH 217 A WAT 218 4 HOH HOH 218 A WAT 219 4 HOH HOH 219 A WAT 220 4 HOH HOH 220 A WAT 221 4 HOH HOH 221 A WAT 222 4 HOH HOH 222 A WAT 223 4 HOH HOH 223 A WAT 224 4 HOH HOH 224 A WAT 225 4 HOH HOH 225 A WAT 226 4 HOH HOH 226 A WAT 227 4 HOH HOH 227 A WAT 228 4 HOH HOH 228 A WAT 229 4 HOH HOH 229 A WAT 230 4 HOH HOH 230 A WAT 231 4 HOH HOH 231 A WAT 232 4 HOH HOH 232 A WAT 233 4 HOH HOH 233 A WAT 234 4 HOH HOH 234 A WAT 235 4 HOH HOH 235 A WAT 236 4 HOH HOH 236 A WAT 237 4 HOH HOH 237 A WAT 238 4 HOH HOH 238 A WAT 239 4 HOH HOH 239 A WAT 240 4 HOH HOH 240 A WAT 241 4 HOH HOH 241 A WAT 242 4 HOH HOH 242 A WAT 243 4 HOH HOH 243 A WAT 244 4 HOH HOH 244 A WAT 245 4 HOH HOH 245 A WAT 246 4 HOH HOH 246 A WAT 247 4 HOH HOH 247 A WAT 248 4 HOH HOH 248 A WAT 249 4 HOH HOH 249 A WAT 250 4 HOH HOH 250 A WAT 251 4 HOH HOH 251 A WAT 252 4 HOH HOH 252 A WAT 253 4 HOH HOH 253 A WAT 254 4 HOH HOH 254 A WAT 255 4 HOH HOH 255 A WAT 256 4 HOH HOH 256 A WAT 257 4 HOH HOH 257 A WAT 258 4 HOH HOH 258 A WAT 259 4 HOH HOH 259 A WAT 260 4 HOH HOH 260 A WAT 261 4 HOH HOH 261 A WAT 262 4 HOH HOH 262 A WAT 263 4 HOH HOH 263 A WAT 264 4 HOH HOH 264 A WAT 265 4 HOH HOH 265 A WAT 266 4 HOH HOH 266 A WAT 267 4 HOH HOH 267 A WAT 268 4 HOH HOH 268 A WAT 269 4 HOH HOH 269 A WAT 270 4 HOH HOH 270 A WAT 271 4 HOH HOH 271 A WAT 272 4 HOH HOH 272 A WAT 273 4 HOH HOH 273 A WAT 274 4 HOH HOH 274 A WAT 275 4 HOH HOH 275 A WAT 276 4 HOH HOH 276 A WAT 277 4 HOH HOH 277 A WAT 278 4 HOH HOH 278 A WAT 279 4 HOH HOH 279 A WAT 280 4 HOH HOH 280 A WAT 281 4 HOH HOH 281 A WAT 282 4 HOH HOH 282 A WAT 283 4 HOH HOH 283 A WAT 284 4 HOH HOH 284 A WAT 285 4 HOH HOH 285 A WAT 286 4 HOH HOH 286 A WAT 287 4 HOH HOH 287 A WAT 288 4 HOH HOH 288 A WAT 289 4 HOH HOH 289 A WAT 290 4 HOH HOH 290 A WAT 291 4 HOH HOH 291 A WAT 292 4 HOH HOH 292 A WAT 293 4 HOH HOH 293 A WAT 294 4 HOH HOH 294 A WAT 295 4 HOH HOH 295 A WAT 296 4 HOH HOH 296 A WAT 297 4 HOH HOH 297 A WAT 298 4 HOH HOH 298 A WAT 299 4 HOH HOH 299 A WAT 300 4 HOH HOH 300 A WAT 301 4 HOH HOH 301 A WAT 302 4 HOH HOH 302 A WAT 303 4 HOH HOH 303 A WAT 304 4 HOH HOH 304 A WAT 305 4 HOH HOH 305 A WAT 306 4 HOH HOH 306 A WAT 307 4 HOH HOH 307 A WAT 308 4 HOH HOH 308 A WAT 309 4 HOH HOH 309 A WAT 310 4 HOH HOH 310 A WAT 311 4 HOH HOH 311 A WAT 312 4 HOH HOH 312 A WAT 313 4 HOH HOH 313 A WAT 314 4 HOH HOH 314 A WAT 315 4 HOH HOH 315 A WAT 316 4 HOH HOH 316 A WAT 317 4 HOH HOH 317 A WAT 318 4 HOH HOH 318 A WAT 319 4 HOH HOH 319 A WAT 320 4 HOH HOH 320 A WAT 321 4 HOH HOH 321 A WAT 322 4 HOH HOH 322 A WAT 323 4 HOH HOH 323 A WAT 324 4 HOH HOH 324 A WAT 325 4 HOH HOH 325 A WAT 326 4 HOH HOH 326 A WAT 327 4 HOH HOH 327 A WAT 328 4 HOH HOH 328 A WAT 329 4 HOH HOH 329 A WAT 330 4 HOH HOH 330 A WAT 331 4 HOH HOH 331 A WAT 332 4 HOH HOH 332 A WAT 333 4 HOH HOH 333 A WAT 335 4 HOH HOH 335 A WAT 336 4 HOH HOH 336 A WAT 337 4 HOH HOH 337 A WAT 338 4 HOH HOH 338 A WAT 339 4 HOH HOH 339 A WAT 340 4 HOH HOH 340 A WAT 341 4 HOH HOH 341 A WAT 342 4 HOH HOH 342 A WAT 343 4 HOH HOH 343 A WAT 344 4 HOH HOH 344 A WAT 345 4 HOH HOH 345 A WAT 346 4 HOH HOH 346 A WAT 347 4 HOH HOH 347 A WAT 348 4 HOH HOH 348 A WAT 349 4 HOH HOH 349 A WAT 350 4 HOH HOH 350 A WAT 351 4 HOH HOH 351 A WAT 352 4 HOH HOH 352 A WAT 353 4 HOH HOH 353 A WAT 354 4 HOH HOH 354 A WAT 355 4 HOH HOH 355 A WAT 356 4 HOH HOH 356 A WAT 357 4 HOH HOH 357 A WAT 358 4 HOH HOH 358 A WAT 359 4 HOH HOH 359 A WAT 360 4 HOH HOH 360 A WAT 361 4 HOH HOH 361 A WAT 362 4 HOH HOH 362 A WAT 363 4 HOH HOH 363 A n 1 0 A VAL 1 n 2 VAL 1 A GLN 2 n 3 GLN 2 A ALA 3 n 4 ALA 3 A VAL 4 n 5 VAL 4 A ALA 5 n 6 ALA 5 A VAL 6 n 7 VAL 6 A LEU 7 n 8 LEU 7 A LYS 8 n 9 LYS 8 A GLY 9 n 10 GLY 9 A ASP 10 n 11 ASP 10 A ALA 11 n 12 ALA 11 A GLY 12 n 13 GLY 12 A VAL 13 n 14 VAL 13 A SER 14 n 15 SER 14 A GLY 15 n 16 GLY 15 A VAL 16 n 17 VAL 16 A VAL 17 n 18 VAL 17 A LYS 18 n 19 LYS 18 A PHE 19 n 20 PHE 19 A GLU 20 n 21 GLU 20 A GLN 21 n 22 GLN 21 A ALA 22 n 23 ALA 22 A SER 23 n 24 SER 23 A GLU 24 n 25 GLU 24 A SER 25 n 26 SER 25 A GLU 26 n 27 GLU 26 A PRO 27 n 28 PRO 27 A THR 28 n 29 THR 28 A THR 29 n 30 THR 29 A VAL 30 n 31 VAL 30 A SER 31 n 32 SER 31 A TYR 32 n 33 TYR 32 A GLU 33 n 34 GLU 33 A ILE 34 n 35 ILE 34 A ALA 35 n 36 ALA 35 A GLY 36 n 37 GLY 36 A ASN 37 n 38 ASN 37 A SER 38 n 39 SER 38 A PRO 39 n 40 PRO 39 A ASN 40 n 41 ASN 40 A ALA 41 n 42 ALA 41 A GLU 42 n 43 GLU 42 A ARG 43 n 44 ARG 43 A GLY 44 n 45 GLY 44 A PHE 45 n 46 PHE 45 A HIS 46 n 47 HIS 46 A ILE 47 n 48 ILE 47 A HIS 48 n 49 HIS 48 A GLU 49 n 50 GLU 49 A PHE 50 n 51 PHE 50 A GLY 51 n 52 GLY 51 A ASP 52 n 53 ASP 52 A ALA 53 n 54 ALA 53 A THR 54 n 55 THR 54 A ASN 55 n 56 ASN 55 A GLY 56 n 57 GLY 56 A CYS 57 n 58 CYS 57 A VAL 58 n 59 VAL 58 A SER 59 n 60 SER 59 A ALA 60 n 61 ALA 60 A GLY 61 n 62 GLY 61 A PRO 62 n 63 PRO 62 A HIS 63 n 64 HIS 63 A PHE 64 n 65 PHE 64 A ASN 65 n 66 ASN 65 A PRO 66 n 67 PRO 66 A PHE 67 n 68 PHE 67 A LYS 68 n 69 LYS 68 A LYS 69 n 70 LYS 69 A THR 70 n 71 THR 70 A HIS 71 n 72 HIS 71 A GLY 72 n 73 GLY 72 A ALA 73 n 74 ALA 73 A PRO 74 n 75 PRO 74 A THR 75 n 76 THR 75 A ASP 76 n 77 ASP 76 A GLU 77 n 78 GLU 77 A VAL 78 n 79 VAL 78 A ARG 79 n 80 ARG 79 A HIS 80 n 81 HIS 80 A VAL 81 n 82 VAL 81 A GLY 82 n 83 GLY 82 A ASP 83 n 84 ASP 83 A MET 84 n 85 MET 84 A ARG 85 n 86 ARG 85 A ASN 86 n 87 ASN 86 A VAL 87 n 88 VAL 87 A LYS 88 n 89 LYS 88 A THR 89 n 90 THR 89 A ASP 90 n 91 ASP 90 A GLU 91 n 92 GLU 91 A ASN 92 n 93 ASN 92 A GLY 93 n 94 GLY 93 A VAL 94 n 95 VAL 94 A ALA 95 n 96 ALA 95 A LYS 96 n 97 LYS 96 A GLY 97 n 98 GLY 97 A SER 98 n 99 SER 98 A PHE 99 n 100 PHE 99 A LYS 100 n 101 LYS 100 A ASP 101 n 102 ASP 101 A SER 102 n 103 SER 102 A LEU 103 n 104 LEU 103 A ILE 104 n 105 ILE 104 A LYS 105 n 106 LYS 105 A LEU 106 n 107 LEU 106 A ILE 107 n 108 ILE 107 A GLY 108 n 109 GLY 108 A PRO 109 n 110 PRO 109 A THR 110 n 111 THR 110 A SER 111 n 112 SER 111 A VAL 112 n 113 VAL 112 A VAL 113 n 114 VAL 113 A GLY 114 n 115 GLY 114 A ARG 115 n 116 ARG 115 A SER 116 n 117 SER 116 A VAL 117 n 118 VAL 117 A VAL 118 n 119 VAL 118 A ILE 119 n 120 ILE 119 A HIS 120 n 121 HIS 120 A ALA 121 n 122 ALA 121 A GLY 122 n 123 GLY 122 A GLN 123 n 124 GLN 123 A ASP 124 n 125 ASP 124 A ASP 125 n 126 ASP 125 A LEU 126 n 127 LEU 126 A GLY 127 n 128 GLY 127 A LYS 128 n 129 LYS 128 A GLY 129 n 130 GLY 129 A ASP 130 n 131 ASP 130 A THR 131 n 132 THR 131 A GLU 132 n 133 GLU 132 A GLU 133 n 134 GLU 133 A SER 134 n 135 SER 134 A LEU 135 n 136 LEU 135 A LYS 136 n 137 LYS 136 A THR 137 n 138 THR 137 A GLY 138 n 139 GLY 138 A ASN 139 n 140 ASN 139 A ALA 140 n 141 ALA 140 A GLY 141 n 142 GLY 141 A PRO 142 n 143 PRO 142 A ARG 143 n 144 ARG 143 A PRO 144 n 145 PRO 144 A ALA 145 n 146 ALA 145 A CYS 146 n 147 CYS 146 A GLY 147 n 148 GLY 147 A VAL 148 n 149 VAL 148 A ILE 149 n 150 ILE 149 A GLY 150 n 151 GLY 150 A LEU 151 n 152 LEU 151 A THR 152 n 153 THR 152 A ASN 153 n 154 ASN 153 A author_defined_assembly 2 dimeric A HIS 46 A ND1 HIS 47 1_555 A CU 154 B CU CU 1_555 A HIS 48 A NE2 HIS 49 1_555 136.6 A HIS 46 A ND1 HIS 47 1_555 A CU 154 B CU CU 1_555 A HIS 120 A NE2 HIS 121 1_555 101.5 A HIS 48 A NE2 HIS 49 1_555 A CU 154 B CU CU 1_555 A HIS 120 A NE2 HIS 121 1_555 120.4 A HIS 63 A ND1 HIS 64 1_555 A ZN 155 C ZN ZN 1_555 A HIS 71 A ND1 HIS 72 1_555 108.7 A HIS 63 A ND1 HIS 64 1_555 A ZN 155 C ZN ZN 1_555 A HIS 80 A ND1 HIS 81 1_555 106.0 A HIS 71 A ND1 HIS 72 1_555 A ZN 155 C ZN ZN 1_555 A HIS 80 A ND1 HIS 81 1_555 117.6 A HIS 63 A ND1 HIS 64 1_555 A ZN 155 C ZN ZN 1_555 A ASP 83 A OD1 ASP 84 1_555 114.4 A HIS 71 A ND1 HIS 72 1_555 A ZN 155 C ZN ZN 1_555 A ASP 83 A OD1 ASP 84 1_555 99.3 A HIS 80 A ND1 HIS 81 1_555 A ZN 155 C ZN ZN 1_555 A ASP 83 A OD1 ASP 84 1_555 111.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 73.4000000000 A N HIS 48 A N HIS 49 A O SER 116 A O SER 117 A N ILE 119 A N ILE 120 A O ALA 145 A O ALA 146 A N THR 152 A N THR 153 A O GLN 2 A O GLN 3 A O LEU 7 A O LEU 8 A N GLY 15 A N GLY 16 A O GLU 20 A O GLU 21 A N THR 29 A N THR 30 A O ILE 34 A O ILE 35 A N ALA 95 A N ALA 96 A O ARG 43 A O ARG 44 A N VAL 87 A N VAL 88 1 A MET 0 A MET 1 1 Y 1 A ARG 115 -102.34 -161.74 1 A ASP 130 -89.63 31.51 0.234 0.197 1.7 60.0 17737 17737 random 1 0.0 Engh & Huber 1.7 60.0 162 1277 2 0 1113 0.017 1.8 18.0 1.7 60.0 1F18 97061 17737 0.0 -3.0 0.057 1 5.5 80.1 1.70 1.85 1 51.3 model building X-PLOR refinement X-PLOR 3.1 phasing X-PLOR Crystal structure of yeast copper-zinc superoxide dismutase mutant GLY85ARG 1 N N 2 N N 3 N N 4 N N A CYS 57 A CYS 58 HELX_P A GLY 61 A GLY 62 5 1 5 A GLU 133 A GLU 134 HELX_P A GLY 138 A GLY 139 1 2 6 disulf 2.029 A CYS 57 A SG CYS 58 1_555 A CYS 146 A SG CYS 147 1_555 metalc 2.082 A HIS 46 A ND1 HIS 47 1_555 A CU 154 B CU CU 1_555 metalc 2.082 A HIS 48 A NE2 HIS 49 1_555 A CU 154 B CU CU 1_555 metalc 1.993 A HIS 63 A ND1 HIS 64 1_555 A ZN 155 C ZN ZN 1_555 metalc 1.986 A HIS 71 A ND1 HIS 72 1_555 A ZN 155 C ZN ZN 1_555 metalc 2.206 A HIS 80 A ND1 HIS 81 1_555 A ZN 155 C ZN ZN 1_555 metalc 2.063 A ASP 83 A OD1 ASP 84 1_555 A ZN 155 C ZN ZN 1_555 metalc 2.129 A HIS 120 A NE2 HIS 121 1_555 A CU 154 B CU CU 1_555 OXIDOREDUCTASE FALS, CuZnSOD, Greek Key, Beta Barrel, OXIDOREDUCTASE SODC_YEAST UNP 1 P00445 0 153 1F18 0 153 P00445 A 1 1 154 1 GLY engineered mutation ARG 85 1F18 A P00445 UNP 85 86 7 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 45 A PHE 46 A HIS 48 A HIS 49 A SER 116 A SER 117 A ILE 119 A ILE 120 A ALA 145 A ALA 146 A THR 152 A THR 153 A GLN 2 A GLN 3 A LEU 7 A LEU 8 A SER 14 A SER 15 A GLU 20 A GLU 21 A THR 28 A THR 29 A ALA 35 A ALA 36 A ALA 95 A ALA 96 A ASP 101 A ASP 102 A GLU 42 A GLU 43 A ARG 43 A ARG 44 A VAL 87 A VAL 88 A LYS 88 A LYS 89 BINDING SITE FOR RESIDUE CU A 154 A CU 154 Software 4 BINDING SITE FOR RESIDUE ZN A 155 A ZN 155 Software 4 A HIS 46 A HIS 47 4 1_555 A HIS 48 A HIS 49 4 1_555 A HIS 63 A HIS 64 4 1_555 A HIS 120 A HIS 121 4 1_555 A HIS 63 A HIS 64 4 1_555 A HIS 71 A HIS 72 4 1_555 A HIS 80 A HIS 81 4 1_555 A ASP 83 A ASP 84 4 1_555 155 H 3 2