0.012594 0.000000 0.000000 0.000000 0.014749 0.000000 0.000000 0.000000 0.020121 0.00000 0.00000 0.00000 Kerfeld, C.A. Serag, A.A. Sawaya, M.R. Krogmann, D.W. Yeates, T.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 79.400 67.800 49.700 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H34 Fe N4 O4 618.503 HEME C non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 40 9215 9225 10.1021/bi002679p 11478889 Structures of cytochrome c-549 and cytochrome c6 from the cyanobacterium Arthrospira maxima. 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.0 1 IMAGE PLATE 1995-06-01 RIGAKU RAXIS SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU RU200 9230.350 CYTOCHROME C6 1 nat polymer 618.503 HEME C 1 syn non-polymer no no GDVAAGASVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFDDDAVAAVAYQVTNGKNAMPGFNGRLSPLQIEDVAAY VVDQAEKGW GDVAAGASVFSANCAACHMGGRNVIVANKTLSKSDLAKYLKGFDDDAVAAVAYQVTNGKNAMPGFNGRLSPLQIEDVAAY VVDQAEKGW A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Arthrospira sample 129910 Arthrospira maxima 1 VAPOR DIFFUSION, HANGING DROP 7.8 0.1 M Tris, pH 7.8, 2.4 M (NH4)2SO4, 0.5 M LiSO4, 1% Glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 software atom_site chem_comp entity pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_conn_angle struct_conn struct_conn_type struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Refinement description Atomic model Data collection Database references Derived calculations Non-polymer description Structure summary 1 0 2001-08-08 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 2 0 2021-03-03 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.type_symbol _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.name _chem_comp.pdbx_synonyms _entity.formula_weight _entity.pdbx_description _pdbx_entity_nonpoly.comp_id _pdbx_entity_nonpoly.name _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_ref_seq_dif.details _struct_site.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1CYI contains crystal structure of cytochrome c6 from Chlamydomonas reinhardtii RCSB Y RCSB 2000-05-18 REL HEC HEME C HEM 200 2 HEC HEC 200 A n 1 1 A ASP 2 n 2 ASP 2 A VAL 3 n 3 VAL 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A GLY 6 n 6 GLY 6 A ALA 7 n 7 ALA 7 A SER 8 n 8 SER 8 A VAL 9 n 9 VAL 9 A PHE 10 n 10 PHE 10 A SER 11 n 11 SER 11 A ALA 12 n 12 ALA 12 A ASN 13 n 13 ASN 13 A CYS 14 n 14 CYS 14 A ALA 15 n 15 ALA 15 A ALA 16 n 16 ALA 16 A CYS 17 n 17 CYS 17 A HIS 18 n 18 HIS 18 A MET 19 n 19 MET 19 A GLY 20 n 20 GLY 20 A GLY 21 n 21 GLY 21 A ARG 22 n 22 ARG 22 A ASN 23 n 23 ASN 23 A VAL 24 n 24 VAL 24 A ILE 25 n 25 ILE 25 A VAL 26 n 26 VAL 26 A ALA 27 n 27 ALA 27 A ASN 28 n 28 ASN 28 A LYS 29 n 29 LYS 29 A THR 30 n 30 THR 30 A LEU 31 n 31 LEU 31 A SER 32 n 32 SER 32 A LYS 33 n 33 LYS 33 A SER 34 n 34 SER 34 A ASP 35 n 35 ASP 35 A LEU 36 n 36 LEU 36 A ALA 37 n 37 ALA 37 A LYS 38 n 38 LYS 38 A TYR 39 n 39 TYR 39 A LEU 40 n 40 LEU 40 A LYS 41 n 41 LYS 41 A GLY 42 n 42 GLY 42 A PHE 43 n 43 PHE 43 A ASP 44 n 44 ASP 44 A ASP 45 n 45 ASP 45 A ASP 46 n 46 ASP 46 A ALA 47 n 47 ALA 47 A VAL 48 n 48 VAL 48 A ALA 49 n 49 ALA 49 A ALA 50 n 50 ALA 50 A VAL 51 n 51 VAL 51 A ALA 52 n 52 ALA 52 A TYR 53 n 53 TYR 53 A GLN 54 n 54 GLN 54 A VAL 55 n 55 VAL 55 A THR 56 n 56 THR 56 A ASN 57 n 57 ASN 57 A GLY 58 n 58 GLY 58 A LYS 59 n 59 LYS 59 A ASN 60 n 60 ASN 60 A ALA 61 n 61 ALA 61 A MET 62 n 62 MET 62 A PRO 63 n 63 PRO 63 A GLY 64 n 64 GLY 64 A PHE 65 n 65 PHE 65 A ASN 66 n 66 ASN 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A LEU 69 n 69 LEU 69 A SER 70 n 70 SER 70 A PRO 71 n 71 PRO 71 A LEU 72 n 72 LEU 72 A GLN 73 n 73 GLN 73 A ILE 74 n 74 ILE 74 A GLU 75 n 75 GLU 75 A ASP 76 n 76 ASP 76 A VAL 77 n 77 VAL 77 A ALA 78 n 78 ALA 78 A ALA 79 n 79 ALA 79 A TYR 80 n 80 TYR 80 A VAL 81 n 81 VAL 81 A VAL 82 n 82 VAL 82 A ASP 83 n 83 ASP 83 A GLN 84 n 84 GLN 84 A ALA 85 n 85 ALA 85 A GLU 86 n 86 GLU 86 A LYS 87 n 87 LYS 87 A GLY 88 n 88 GLY 88 A TRP 89 n 89 TRP 89 A author_defined_assembly 1 monomeric A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NA HEC 1_555 92.4 A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NB HEC 1_555 91.1 A HEC 200 B NA HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NB HEC 1_555 91.7 A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NC HEC 1_555 86.9 A HEC 200 B NA HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NC HEC 1_555 179.3 A HEC 200 B NB HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B NC HEC 1_555 88.6 A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B ND HEC 1_555 85.9 A HEC 200 B NA HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B ND HEC 1_555 90.2 A HEC 200 B NB HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B ND HEC 1_555 176.4 A HEC 200 B NC HEC 1_555 A HEC 200 B FE HEC 1_555 A HEC 200 B ND HEC 1_555 89.4 A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 A MET 62 A SD MET 62 1_555 170.5 A HEC 200 B NA HEC 1_555 A HEC 200 B FE HEC 1_555 A MET 62 A SD MET 62 1_555 95.4 A HEC 200 B NB HEC 1_555 A HEC 200 B FE HEC 1_555 A MET 62 A SD MET 62 1_555 94.1 A HEC 200 B NC HEC 1_555 A HEC 200 B FE HEC 1_555 A MET 62 A SD MET 62 1_555 85.3 A HEC 200 B ND HEC 1_555 A HEC 200 B FE HEC 1_555 A MET 62 A SD MET 62 1_555 88.7 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLY 1 A GLY 1 1 Y 1 A ARG 22 -105.45 -158.74 1 A LYS 29 -114.68 52.33 1 A ASN 60 46.30 -123.24 0.2550000 0.2320000 0.2330000 0.2330000 2.7 50.0 344 7504 7504 80.4 5% Random 1 0.0 0.0 Engh & Huber 2.7 50.0 0 686 43 0 643 0.011486 1.21714 27.6 2.7 50.0 1F1F 7504 7504 0.0 0.0 0.0860000 1 9.2 3.2 80.8 2.75 3.00 1212 74.0 phasing AMoRE refinement CNS data scaling SCALEPACK CYTOCHROME C6 FROM ARTHROSPIRA MAXIMA CRYSTAL STRUCTURE OF CYTOCHROME C6 FROM ARTHROSPIRA MAXIMA 1 N N 2 N N A ASP 2 A ASP 2 HELX_P A CYS 14 A CYS 14 1 1 13 A CYS 14 A CYS 14 HELX_P A MET 19 A MET 19 1 2 6 A GLY 20 A GLY 20 HELX_P A ARG 22 A ARG 22 5 3 3 A SER 32 A SER 32 HELX_P A LEU 40 A LEU 40 1 4 9 A ASP 46 A ASP 46 HELX_P A GLY 58 A GLY 58 1 5 13 A SER 70 A SER 70 HELX_P A GLY 88 A GLY 88 1 6 19 covale 1.828 none A CYS 14 A SG CYS 14 1_555 A HEC 200 B CAB HEC 1_555 covale 1.830 none A CYS 17 A SG CYS 17 1_555 A HEC 200 B CAC HEC 1_555 metalc 2.017 A HIS 18 A NE2 HIS 18 1_555 A HEC 200 B FE HEC 1_555 metalc 2.330 A MET 62 A SD MET 62 1_555 A HEC 200 B FE HEC 1_555 ELECTRON TRANSPORT cytochrome c6, heme, protein structure, cyanobacteria, photosynthesis, ELECTRON TRANSPORT CYC6_SPIMA UNP 1 P00118 1 89 1F1F 1 89 P00118 A 1 1 89 1 LYS conflict LEU 72 1F1F A P00118 UNP 72 72 BINDING SITE FOR RESIDUE HEC A 200 A HEC 200 Software 18 A ASN 13 A ASN 13 18 1_555 A CYS 14 A CYS 14 18 1_555 A CYS 17 A CYS 17 18 1_555 A HIS 18 A HIS 18 18 1_555 A ASN 23 A ASN 23 18 1_555 A LYS 29 A LYS 29 18 1_555 A THR 30 A THR 30 18 1_555 A LEU 31 A LEU 31 18 1_555 A ASP 35 A ASP 35 18 1_555 A LEU 36 A LEU 36 18 1_555 A TYR 39 A TYR 39 18 1_555 A GLN 54 A GLN 54 18 1_555 A VAL 55 A VAL 55 18 1_555 A LYS 59 A LYS 59 18 1_555 A ASN 60 A ASN 60 18 1_555 A ALA 61 A ALA 61 18 1_555 A MET 62 A MET 62 18 1_555 A GLU 86 A GLU 86 18 2_554 19 P 21 21 21