0.014282
0.008246
0.000000
0.000000
0.016491
0.000000
0.000000
0.000000
0.006575
0.00000
0.00000
0.00000
Meyer, P.
Schneider, B.
Sarfati, S.
Deville-Bonne, D.
Guerreiro, C.
Boretto, J.
Janin, J.
Veron, M.
Canard, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
70.018
70.018
152.098
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N2 O10 P2
384.173
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-DIPHOSPHATE
non-polymer
C10 H15 N2 O13 P3
464.153
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-TRIPHOSPHATE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
S
P
N
75
N
O
N
76
N
O
N
77
N
O
N
78
N
P
N
79
N
O
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
C
N
84
S
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
R
C
Y
89
N
N
Y
90
N
C
N
91
N
O
Y
92
N
N
Y
93
N
C
N
94
N
O
Y
95
N
C
N
96
N
C
Y
97
N
C
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
P
N
113
N
O
N
114
N
O
N
115
N
O
N
116
N
O
N
117
R
P
N
118
N
O
N
119
N
O
N
120
N
O
N
121
S
P
N
122
N
O
N
123
N
O
N
124
N
O
N
125
N
C
N
126
S
C
N
127
N
O
N
128
R
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
N
132
N
O
Y
133
N
N
Y
134
N
C
N
135
N
O
Y
136
N
C
N
137
N
C
N
138
N
C
N
139
N
C
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
C
N
160
N
C
N
161
N
C
N
162
N
O
N
163
N
N
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
N
180
N
C
N
181
N
C
N
182
N
O
N
183
N
O
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
Y
209
N
C
Y
210
N
N
Y
211
N
C
Y
212
N
C
Y
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
O
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
S
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
N
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
C
N
303
N
S
N
304
N
C
N
305
N
O
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
MG
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
P
N
342
N
O
N
343
N
O
N
344
N
O
N
345
N
O
N
346
N
N
N
347
S
C
N
348
N
C
N
349
N
O
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
N
N
364
S
C
N
365
N
C
N
366
N
O
N
367
N
C
N
368
N
O
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
R
C
N
382
N
O
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
N
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
N
N
422
S
C
N
423
N
C
N
424
N
O
N
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
Y
431
N
C
N
432
N
O
N
433
N
O
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
N
N
446
S
C
N
447
N
C
N
448
N
O
N
449
N
C
N
450
N
C
N
451
N
C
N
452
N
O
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
Y
95
N
sing
Y
96
N
sing
N
97
N
doub
Y
98
N
sing
Y
99
N
sing
N
100
N
sing
N
101
N
doub
Y
102
N
sing
N
103
N
sing
Y
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
Y
136
N
sing
Y
137
N
sing
Y
138
N
doub
N
139
N
sing
N
140
N
doub
Y
141
N
sing
Y
142
N
sing
N
143
N
sing
N
144
N
doub
Y
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
doub
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
doub
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
Y
210
N
sing
Y
211
N
doub
Y
212
N
doub
N
213
N
sing
Y
214
N
sing
N
215
N
sing
Y
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
Y
318
N
doub
Y
319
N
sing
Y
320
N
sing
N
321
N
sing
Y
322
N
doub
N
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
Y
419
N
doub
Y
420
N
sing
Y
421
N
sing
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
doub
N
426
N
sing
Y
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
doub
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
UK
EMBO J.
EMJODG
0897
0261-4189
19
3520
3529
10.1093/emboj/19.14.3520
10899107
Structural basis for activation of alpha-boranophosphate nucleotide analogues targeting drug-resistant reverse transcriptase.
2000
10.2210/pdb1f3f/pdb
pdb_00001f3f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.364
1.0
D41A
LURE
1.364
SYNCHROTRON
LURE BEAMLINE D41A
16735.242
PROTEIN (NUCLEOSIDE DIPHOSPHATE KINASE)
2.7.4.6
H122G
3
man
polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
464.153
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-TRIPHOSPHATE
3
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
384.173
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
344
nat
water
NDP KINASE, NDK
no
no
MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM
VFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLTEVKPNPNLYE
MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM
VFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSDSVESANREIALWFKPEELLTEVKPNPNLYE
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Dictyostelium
Escherichia
sample
44689
Dictyostelium discoideum
562
Escherichia coli
PLASMID
PTZ18R
1
2.14
42.59
7.50
pH 7.50
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Derived calculations
Data collection
1
0
2000-09-13
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-06-02
REL
MG
MAGNESIUM ION
D4T
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-TRIPHOSPHATE
PO4
PHOSPHATE ION
D4D
2',3'-DEHYDRO-2',3'-DEOXY-THYMIDINE 5'-DIPHOSPHATE
HOH
water
MG
165
2
MG
MG
165
A
D4T
160
3
D4T
D4T
160
A
PO4
162
4
PO4
PO4
162
B
MG
166
2
MG
MG
166
B
D4T
161
3
D4T
D4T
161
B
D4D
163
5
D4D
D4D
163
B
MG
167
2
MG
MG
167
C
D4T
164
3
D4T
D4T
164
C
HOH
504
6
HOH
HOH
504
A
HOH
506
6
HOH
HOH
506
A
HOH
508
6
HOH
HOH
508
A
HOH
512
6
HOH
HOH
512
A
HOH
518
6
HOH
HOH
518
A
HOH
519
6
HOH
HOH
519
A
HOH
526
6
HOH
HOH
526
A
HOH
527
6
HOH
HOH
527
A
HOH
528
6
HOH
HOH
528
A
HOH
529
6
HOH
HOH
529
A
HOH
531
6
HOH
HOH
531
A
HOH
536
6
HOH
HOH
536
A
HOH
542
6
HOH
HOH
542
A
HOH
544
6
HOH
HOH
544
A
HOH
545
6
HOH
HOH
545
A
HOH
550
6
HOH
HOH
550
A
HOH
553
6
HOH
HOH
553
A
HOH
558
6
HOH
HOH
558
A
HOH
563
6
HOH
HOH
563
A
HOH
564
6
HOH
HOH
564
A
HOH
565
6
HOH
HOH
565
A
HOH
566
6
HOH
HOH
566
A
HOH
567
6
HOH
HOH
567
A
HOH
571
6
HOH
HOH
571
A
HOH
573
6
HOH
HOH
573
A
HOH
578
6
HOH
HOH
578
A
HOH
579
6
HOH
HOH
579
A
HOH
580
6
HOH
HOH
580
A
HOH
583
6
HOH
HOH
583
A
HOH
584
6
HOH
HOH
584
A
HOH
594
6
HOH
HOH
594
A
HOH
601
6
HOH
HOH
601
A
HOH
602
6
HOH
HOH
602
A
HOH
604
6
HOH
HOH
604
A
HOH
605
6
HOH
HOH
605
A
HOH
606
6
HOH
HOH
606
A
HOH
608
6
HOH
HOH
608
A
HOH
609
6
HOH
HOH
609
A
HOH
615
6
HOH
HOH
615
A
HOH
616
6
HOH
HOH
616
A
HOH
617
6
HOH
HOH
617
A
HOH
618
6
HOH
HOH
618
A
HOH
619
6
HOH
HOH
619
A
HOH
621
6
HOH
HOH
621
A
HOH
622
6
HOH
HOH
622
A
HOH
623
6
HOH
HOH
623
A
HOH
624
6
HOH
HOH
624
A
HOH
626
6
HOH
HOH
626
A
HOH
629
6
HOH
HOH
629
A
HOH
632
6
HOH
HOH
632
A
HOH
636
6
HOH
HOH
636
A
HOH
641
6
HOH
HOH
641
A
HOH
642
6
HOH
HOH
642
A
HOH
644
6
HOH
HOH
644
A
HOH
646
6
HOH
HOH
646
A
HOH
648
6
HOH
HOH
648
A
HOH
650
6
HOH
HOH
650
A
HOH
654
6
HOH
HOH
654
A
HOH
657
6
HOH
HOH
657
A
HOH
660
6
HOH
HOH
660
A
HOH
662
6
HOH
HOH
662
A
HOH
664
6
HOH
HOH
664
A
HOH
665
6
HOH
HOH
665
A
HOH
667
6
HOH
HOH
667
A
HOH
668
6
HOH
HOH
668
A
HOH
672
6
HOH
HOH
672
A
HOH
674
6
HOH
HOH
674
A
HOH
675
6
HOH
HOH
675
A
HOH
676
6
HOH
HOH
676
A
HOH
679
6
HOH
HOH
679
A
HOH
683
6
HOH
HOH
683
A
HOH
684
6
HOH
HOH
684
A
HOH
685
6
HOH
HOH
685
A
HOH
687
6
HOH
HOH
687
A
HOH
688
6
HOH
HOH
688
A
HOH
690
6
HOH
HOH
690
A
HOH
691
6
HOH
HOH
691
A
HOH
694
6
HOH
HOH
694
A
HOH
700
6
HOH
HOH
700
A
HOH
709
6
HOH
HOH
709
A
HOH
710
6
HOH
HOH
710
A
HOH
711
6
HOH
HOH
711
A
HOH
712
6
HOH
HOH
712
A
HOH
716
6
HOH
HOH
716
A
HOH
725
6
HOH
HOH
725
A
HOH
726
6
HOH
HOH
726
A
HOH
727
6
HOH
HOH
727
A
HOH
734
6
HOH
HOH
734
A
HOH
736
6
HOH
HOH
736
A
HOH
739
6
HOH
HOH
739
A
HOH
740
6
HOH
HOH
740
A
HOH
744
6
HOH
HOH
744
A
HOH
747
6
HOH
HOH
747
A
HOH
750
6
HOH
HOH
750
A
HOH
753
6
HOH
HOH
753
A
HOH
754
6
HOH
HOH
754
A
HOH
759
6
HOH
HOH
759
A
HOH
763
6
HOH
HOH
763
A
HOH
764
6
HOH
HOH
764
A
HOH
766
6
HOH
HOH
766
A
HOH
770
6
HOH
HOH
770
A
HOH
777
6
HOH
HOH
777
A
HOH
779
6
HOH
HOH
779
A
HOH
780
6
HOH
HOH
780
A
HOH
783
6
HOH
HOH
783
A
HOH
789
6
HOH
HOH
789
A
HOH
790
6
HOH
HOH
790
A
HOH
793
6
HOH
HOH
793
A
HOH
795
6
HOH
HOH
795
A
HOH
797
6
HOH
HOH
797
A
HOH
800
6
HOH
HOH
800
A
HOH
801
6
HOH
HOH
801
A
HOH
802
6
HOH
HOH
802
A
HOH
804
6
HOH
HOH
804
A
HOH
805
6
HOH
HOH
805
A
HOH
806
6
HOH
HOH
806
A
HOH
807
6
HOH
HOH
807
A
HOH
809
6
HOH
HOH
809
A
HOH
810
6
HOH
HOH
810
A
HOH
813
6
HOH
HOH
813
A
HOH
815
6
HOH
HOH
815
A
HOH
817
6
HOH
HOH
817
A
HOH
821
6
HOH
HOH
821
A
HOH
823
6
HOH
HOH
823
A
HOH
825
6
HOH
HOH
825
A
HOH
826
6
HOH
HOH
826
A
HOH
832
6
HOH
HOH
832
A
HOH
835
6
HOH
HOH
835
A
HOH
840
6
HOH
HOH
840
A
HOH
841
6
HOH
HOH
841
A
HOH
500
6
HOH
HOH
500
B
HOH
502
6
HOH
HOH
502
B
HOH
505
6
HOH
HOH
505
B
HOH
507
6
HOH
HOH
507
B
HOH
510
6
HOH
HOH
510
B
HOH
513
6
HOH
HOH
513
B
HOH
514
6
HOH
HOH
514
B
HOH
515
6
HOH
HOH
515
B
HOH
516
6
HOH
HOH
516
B
HOH
517
6
HOH
HOH
517
B
HOH
520
6
HOH
HOH
520
B
HOH
523
6
HOH
HOH
523
B
HOH
524
6
HOH
HOH
524
B
HOH
525
6
HOH
HOH
525
B
HOH
532
6
HOH
HOH
532
B
HOH
535
6
HOH
HOH
535
B
HOH
538
6
HOH
HOH
538
B
HOH
541
6
HOH
HOH
541
B
HOH
546
6
HOH
HOH
546
B
HOH
547
6
HOH
HOH
547
B
HOH
551
6
HOH
HOH
551
B
HOH
552
6
HOH
HOH
552
B
HOH
554
6
HOH
HOH
554
B
HOH
555
6
HOH
HOH
555
B
HOH
556
6
HOH
HOH
556
B
HOH
559
6
HOH
HOH
559
B
HOH
568
6
HOH
HOH
568
B
HOH
575
6
HOH
HOH
575
B
HOH
576
6
HOH
HOH
576
B
HOH
581
6
HOH
HOH
581
B
HOH
585
6
HOH
HOH
585
B
HOH
586
6
HOH
HOH
586
B
HOH
587
6
HOH
HOH
587
B
HOH
588
6
HOH
HOH
588
B
HOH
595
6
HOH
HOH
595
B
HOH
596
6
HOH
HOH
596
B
HOH
597
6
HOH
HOH
597
B
HOH
598
6
HOH
HOH
598
B
HOH
599
6
HOH
HOH
599
B
HOH
610
6
HOH
HOH
610
B
HOH
611
6
HOH
HOH
611
B
HOH
627
6
HOH
HOH
627
B
HOH
628
6
HOH
HOH
628
B
HOH
630
6
HOH
HOH
630
B
HOH
633
6
HOH
HOH
633
B
HOH
634
6
HOH
HOH
634
B
HOH
637
6
HOH
HOH
637
B
HOH
638
6
HOH
HOH
638
B
HOH
640
6
HOH
HOH
640
B
HOH
643
6
HOH
HOH
643
B
HOH
649
6
HOH
HOH
649
B
HOH
651
6
HOH
HOH
651
B
HOH
653
6
HOH
HOH
653
B
HOH
656
6
HOH
HOH
656
B
HOH
658
6
HOH
HOH
658
B
HOH
663
6
HOH
HOH
663
B
HOH
669
6
HOH
HOH
669
B
HOH
671
6
HOH
HOH
671
B
HOH
677
6
HOH
HOH
677
B
HOH
680
6
HOH
HOH
680
B
HOH
682
6
HOH
HOH
682
B
HOH
689
6
HOH
HOH
689
B
HOH
696
6
HOH
HOH
696
B
HOH
697
6
HOH
HOH
697
B
HOH
699
6
HOH
HOH
699
B
HOH
701
6
HOH
HOH
701
B
HOH
703
6
HOH
HOH
703
B
HOH
705
6
HOH
HOH
705
B
HOH
713
6
HOH
HOH
713
B
HOH
715
6
HOH
HOH
715
B
HOH
719
6
HOH
HOH
719
B
HOH
722
6
HOH
HOH
722
B
HOH
723
6
HOH
HOH
723
B
HOH
728
6
HOH
HOH
728
B
HOH
729
6
HOH
HOH
729
B
HOH
730
6
HOH
HOH
730
B
HOH
738
6
HOH
HOH
738
B
HOH
742
6
HOH
HOH
742
B
HOH
745
6
HOH
HOH
745
B
HOH
751
6
HOH
HOH
751
B
HOH
755
6
HOH
HOH
755
B
HOH
756
6
HOH
HOH
756
B
HOH
758
6
HOH
HOH
758
B
HOH
760
6
HOH
HOH
760
B
HOH
761
6
HOH
HOH
761
B
HOH
768
6
HOH
HOH
768
B
HOH
769
6
HOH
HOH
769
B
HOH
771
6
HOH
HOH
771
B
HOH
772
6
HOH
HOH
772
B
HOH
775
6
HOH
HOH
775
B
HOH
778
6
HOH
HOH
778
B
HOH
782
6
HOH
HOH
782
B
HOH
784
6
HOH
HOH
784
B
HOH
786
6
HOH
HOH
786
B
HOH
787
6
HOH
HOH
787
B
HOH
791
6
HOH
HOH
791
B
HOH
792
6
HOH
HOH
792
B
HOH
794
6
HOH
HOH
794
B
HOH
798
6
HOH
HOH
798
B
HOH
799
6
HOH
HOH
799
B
HOH
808
6
HOH
HOH
808
B
HOH
811
6
HOH
HOH
811
B
HOH
812
6
HOH
HOH
812
B
HOH
814
6
HOH
HOH
814
B
HOH
816
6
HOH
HOH
816
B
HOH
820
6
HOH
HOH
820
B
HOH
827
6
HOH
HOH
827
B
HOH
828
6
HOH
HOH
828
B
HOH
829
6
HOH
HOH
829
B
HOH
830
6
HOH
HOH
830
B
HOH
831
6
HOH
HOH
831
B
HOH
833
6
HOH
HOH
833
B
HOH
834
6
HOH
HOH
834
B
HOH
839
6
HOH
HOH
839
B
HOH
843
6
HOH
HOH
843
B
HOH
501
6
HOH
HOH
501
C
HOH
503
6
HOH
HOH
503
C
HOH
509
6
HOH
HOH
509
C
HOH
511
6
HOH
HOH
511
C
HOH
521
6
HOH
HOH
521
C
HOH
522
6
HOH
HOH
522
C
HOH
530
6
HOH
HOH
530
C
HOH
533
6
HOH
HOH
533
C
HOH
534
6
HOH
HOH
534
C
HOH
537
6
HOH
HOH
537
C
HOH
539
6
HOH
HOH
539
C
HOH
540
6
HOH
HOH
540
C
HOH
543
6
HOH
HOH
543
C
HOH
548
6
HOH
HOH
548
C
HOH
549
6
HOH
HOH
549
C
HOH
557
6
HOH
HOH
557
C
HOH
560
6
HOH
HOH
560
C
HOH
561
6
HOH
HOH
561
C
HOH
562
6
HOH
HOH
562
C
HOH
569
6
HOH
HOH
569
C
HOH
570
6
HOH
HOH
570
C
HOH
572
6
HOH
HOH
572
C
HOH
574
6
HOH
HOH
574
C
HOH
577
6
HOH
HOH
577
C
HOH
582
6
HOH
HOH
582
C
HOH
589
6
HOH
HOH
589
C
HOH
590
6
HOH
HOH
590
C
HOH
591
6
HOH
HOH
591
C
HOH
592
6
HOH
HOH
592
C
HOH
593
6
HOH
HOH
593
C
HOH
600
6
HOH
HOH
600
C
HOH
603
6
HOH
HOH
603
C
HOH
607
6
HOH
HOH
607
C
HOH
612
6
HOH
HOH
612
C
HOH
613
6
HOH
HOH
613
C
HOH
614
6
HOH
HOH
614
C
HOH
620
6
HOH
HOH
620
C
HOH
625
6
HOH
HOH
625
C
HOH
631
6
HOH
HOH
631
C
HOH
635
6
HOH
HOH
635
C
HOH
639
6
HOH
HOH
639
C
HOH
645
6
HOH
HOH
645
C
HOH
647
6
HOH
HOH
647
C
HOH
652
6
HOH
HOH
652
C
HOH
655
6
HOH
HOH
655
C
HOH
659
6
HOH
HOH
659
C
HOH
661
6
HOH
HOH
661
C
HOH
666
6
HOH
HOH
666
C
HOH
670
6
HOH
HOH
670
C
HOH
673
6
HOH
HOH
673
C
HOH
678
6
HOH
HOH
678
C
HOH
681
6
HOH
HOH
681
C
HOH
686
6
HOH
HOH
686
C
HOH
692
6
HOH
HOH
692
C
HOH
693
6
HOH
HOH
693
C
HOH
695
6
HOH
HOH
695
C
HOH
698
6
HOH
HOH
698
C
HOH
702
6
HOH
HOH
702
C
HOH
704
6
HOH
HOH
704
C
HOH
706
6
HOH
HOH
706
C
HOH
707
6
HOH
HOH
707
C
HOH
708
6
HOH
HOH
708
C
HOH
714
6
HOH
HOH
714
C
HOH
717
6
HOH
HOH
717
C
HOH
718
6
HOH
HOH
718
C
HOH
720
6
HOH
HOH
720
C
HOH
721
6
HOH
HOH
721
C
HOH
724
6
HOH
HOH
724
C
HOH
731
6
HOH
HOH
731
C
HOH
732
6
HOH
HOH
732
C
HOH
733
6
HOH
HOH
733
C
HOH
735
6
HOH
HOH
735
C
HOH
737
6
HOH
HOH
737
C
HOH
741
6
HOH
HOH
741
C
HOH
743
6
HOH
HOH
743
C
HOH
746
6
HOH
HOH
746
C
HOH
748
6
HOH
HOH
748
C
HOH
749
6
HOH
HOH
749
C
HOH
752
6
HOH
HOH
752
C
HOH
757
6
HOH
HOH
757
C
HOH
762
6
HOH
HOH
762
C
HOH
765
6
HOH
HOH
765
C
HOH
767
6
HOH
HOH
767
C
HOH
773
6
HOH
HOH
773
C
HOH
774
6
HOH
HOH
774
C
HOH
776
6
HOH
HOH
776
C
HOH
781
6
HOH
HOH
781
C
HOH
785
6
HOH
HOH
785
C
HOH
788
6
HOH
HOH
788
C
HOH
796
6
HOH
HOH
796
C
HOH
803
6
HOH
HOH
803
C
HOH
818
6
HOH
HOH
818
C
HOH
819
6
HOH
HOH
819
C
HOH
822
6
HOH
HOH
822
C
HOH
824
6
HOH
HOH
824
C
HOH
836
6
HOH
HOH
836
C
HOH
837
6
HOH
HOH
837
C
HOH
838
6
HOH
HOH
838
C
HOH
842
6
HOH
HOH
842
C
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
VAL
6
n
6
VAL
6
A
ASN
7
n
7
ASN
7
A
LYS
8
n
8
LYS
8
A
GLU
9
n
9
GLU
9
A
ARG
10
n
10
ARG
10
A
THR
11
n
11
THR
11
A
PHE
12
n
12
PHE
12
A
LEU
13
n
13
LEU
13
A
ALA
14
n
14
ALA
14
A
VAL
15
n
15
VAL
15
A
LYS
16
n
16
LYS
16
A
PRO
17
n
17
PRO
17
A
ASP
18
n
18
ASP
18
A
GLY
19
n
19
GLY
19
A
VAL
20
n
20
VAL
20
A
ALA
21
n
21
ALA
21
A
ARG
22
n
22
ARG
22
A
GLY
23
n
23
GLY
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
GLU
27
n
27
GLU
27
A
ILE
28
n
28
ILE
28
A
ILE
29
n
29
ILE
29
A
ALA
30
n
30
ALA
30
A
ARG
31
n
31
ARG
31
A
TYR
32
n
32
TYR
32
A
GLU
33
n
33
GLU
33
A
LYS
34
n
34
LYS
34
A
LYS
35
n
35
LYS
35
A
GLY
36
n
36
GLY
36
A
PHE
37
n
37
PHE
37
A
VAL
38
n
38
VAL
38
A
LEU
39
n
39
LEU
39
A
VAL
40
n
40
VAL
40
A
GLY
41
n
41
GLY
41
A
LEU
42
n
42
LEU
42
A
LYS
43
n
43
LYS
43
A
GLN
44
n
44
GLN
44
A
LEU
45
n
45
LEU
45
A
VAL
46
n
46
VAL
46
A
PRO
47
n
47
PRO
47
A
THR
48
n
48
THR
48
A
LYS
49
n
49
LYS
49
A
ASP
50
n
50
ASP
50
A
LEU
51
n
51
LEU
51
A
ALA
52
n
52
ALA
52
A
GLU
53
n
53
GLU
53
A
SER
54
n
54
SER
54
A
HIS
55
n
55
HIS
55
A
TYR
56
n
56
TYR
56
A
ALA
57
n
57
ALA
57
A
GLU
58
n
58
GLU
58
A
HIS
59
n
59
HIS
59
A
LYS
60
n
60
LYS
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
PRO
63
n
63
PRO
63
A
PHE
64
n
64
PHE
64
A
PHE
65
n
65
PHE
65
A
GLY
66
n
66
GLY
66
A
GLY
67
n
67
GLY
67
A
LEU
68
n
68
LEU
68
A
VAL
69
n
69
VAL
69
A
SER
70
n
70
SER
70
A
PHE
71
n
71
PHE
71
A
ILE
72
n
72
ILE
72
A
THR
73
n
73
THR
73
A
SER
74
n
74
SER
74
A
GLY
75
n
75
GLY
75
A
PRO
76
n
76
PRO
76
A
VAL
77
n
77
VAL
77
A
VAL
78
n
78
VAL
78
A
ALA
79
n
79
ALA
79
A
MET
80
n
80
MET
80
A
VAL
81
n
81
VAL
81
A
PHE
82
n
82
PHE
82
A
GLU
83
n
83
GLU
83
A
GLY
84
n
84
GLY
84
A
LYS
85
n
85
LYS
85
A
GLY
86
n
86
GLY
86
A
VAL
87
n
87
VAL
87
A
VAL
88
n
88
VAL
88
A
ALA
89
n
89
ALA
89
A
SER
90
n
90
SER
90
A
ALA
91
n
91
ALA
91
A
ARG
92
n
92
ARG
92
A
LEU
93
n
93
LEU
93
A
MET
94
n
94
MET
94
A
ILE
95
n
95
ILE
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
THR
98
n
98
THR
98
A
ASN
99
n
99
ASN
99
A
PRO
100
n
100
PRO
100
A
LEU
101
n
101
LEU
101
A
ALA
102
n
102
ALA
102
A
SER
103
n
103
SER
103
A
ALA
104
n
104
ALA
104
A
PRO
105
n
105
PRO
105
A
GLY
106
n
106
GLY
106
A
SER
107
n
107
SER
107
A
ILE
108
n
108
ILE
108
A
ARG
109
n
109
ARG
109
A
GLY
110
n
110
GLY
110
A
ASP
111
n
111
ASP
111
A
PHE
112
n
112
PHE
112
A
GLY
113
n
113
GLY
113
A
VAL
114
n
114
VAL
114
A
ASP
115
n
115
ASP
115
A
VAL
116
n
116
VAL
116
A
GLY
117
n
117
GLY
117
A
ARG
118
n
118
ARG
118
A
ASN
119
n
119
ASN
119
A
ILE
120
n
120
ILE
120
A
ILE
121
n
121
ILE
121
A
GLY
122
n
122
GLY
122
A
GLY
123
n
123
GLY
123
A
SER
124
n
124
SER
124
A
ASP
125
n
125
ASP
125
A
SER
126
n
126
SER
126
A
VAL
127
n
127
VAL
127
A
GLU
128
n
128
GLU
128
A
SER
129
n
129
SER
129
A
ALA
130
n
130
ALA
130
A
ASN
131
n
131
ASN
131
A
ARG
132
n
132
ARG
132
A
GLU
133
n
133
GLU
133
A
ILE
134
n
134
ILE
134
A
ALA
135
n
135
ALA
135
A
LEU
136
n
136
LEU
136
A
TRP
137
n
137
TRP
137
A
PHE
138
n
138
PHE
138
A
LYS
139
n
139
LYS
139
A
PRO
140
n
140
PRO
140
A
GLU
141
n
141
GLU
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
LEU
144
n
144
LEU
144
A
THR
145
n
145
THR
145
A
GLU
146
n
146
GLU
146
A
VAL
147
n
147
VAL
147
A
LYS
148
n
148
LYS
148
A
PRO
149
n
149
PRO
149
A
ASN
150
n
150
ASN
150
A
PRO
151
n
151
PRO
151
A
ASN
152
n
152
ASN
152
A
LEU
153
n
153
LEU
153
A
TYR
154
n
154
TYR
154
A
GLU
155
n
155
GLU
155
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
VAL
6
n
6
VAL
6
B
ASN
7
n
7
ASN
7
B
LYS
8
n
8
LYS
8
B
GLU
9
n
9
GLU
9
B
ARG
10
n
10
ARG
10
B
THR
11
n
11
THR
11
B
PHE
12
n
12
PHE
12
B
LEU
13
n
13
LEU
13
B
ALA
14
n
14
ALA
14
B
VAL
15
n
15
VAL
15
B
LYS
16
n
16
LYS
16
B
PRO
17
n
17
PRO
17
B
ASP
18
n
18
ASP
18
B
GLY
19
n
19
GLY
19
B
VAL
20
n
20
VAL
20
B
ALA
21
n
21
ALA
21
B
ARG
22
n
22
ARG
22
B
GLY
23
n
23
GLY
23
B
LEU
24
n
24
LEU
24
B
VAL
25
n
25
VAL
25
B
GLY
26
n
26
GLY
26
B
GLU
27
n
27
GLU
27
B
ILE
28
n
28
ILE
28
B
ILE
29
n
29
ILE
29
B
ALA
30
n
30
ALA
30
B
ARG
31
n
31
ARG
31
B
TYR
32
n
32
TYR
32
B
GLU
33
n
33
GLU
33
B
LYS
34
n
34
LYS
34
B
LYS
35
n
35
LYS
35
B
GLY
36
n
36
GLY
36
B
PHE
37
n
37
PHE
37
B
VAL
38
n
38
VAL
38
B
LEU
39
n
39
LEU
39
B
VAL
40
n
40
VAL
40
B
GLY
41
n
41
GLY
41
B
LEU
42
n
42
LEU
42
B
LYS
43
n
43
LYS
43
B
GLN
44
n
44
GLN
44
B
LEU
45
n
45
LEU
45
B
VAL
46
n
46
VAL
46
B
PRO
47
n
47
PRO
47
B
THR
48
n
48
THR
48
B
LYS
49
n
49
LYS
49
B
ASP
50
n
50
ASP
50
B
LEU
51
n
51
LEU
51
B
ALA
52
n
52
ALA
52
B
GLU
53
n
53
GLU
53
B
SER
54
n
54
SER
54
B
HIS
55
n
55
HIS
55
B
TYR
56
n
56
TYR
56
B
ALA
57
n
57
ALA
57
B
GLU
58
n
58
GLU
58
B
HIS
59
n
59
HIS
59
B
LYS
60
n
60
LYS
60
B
GLU
61
n
61
GLU
61
B
ARG
62
n
62
ARG
62
B
PRO
63
n
63
PRO
63
B
PHE
64
n
64
PHE
64
B
PHE
65
n
65
PHE
65
B
GLY
66
n
66
GLY
66
B
GLY
67
n
67
GLY
67
B
LEU
68
n
68
LEU
68
B
VAL
69
n
69
VAL
69
B
SER
70
n
70
SER
70
B
PHE
71
n
71
PHE
71
B
ILE
72
n
72
ILE
72
B
THR
73
n
73
THR
73
B
SER
74
n
74
SER
74
B
GLY
75
n
75
GLY
75
B
PRO
76
n
76
PRO
76
B
VAL
77
n
77
VAL
77
B
VAL
78
n
78
VAL
78
B
ALA
79
n
79
ALA
79
B
MET
80
n
80
MET
80
B
VAL
81
n
81
VAL
81
B
PHE
82
n
82
PHE
82
B
GLU
83
n
83
GLU
83
B
GLY
84
n
84
GLY
84
B
LYS
85
n
85
LYS
85
B
GLY
86
n
86
GLY
86
B
VAL
87
n
87
VAL
87
B
VAL
88
n
88
VAL
88
B
ALA
89
n
89
ALA
89
B
SER
90
n
90
SER
90
B
ALA
91
n
91
ALA
91
B
ARG
92
n
92
ARG
92
B
LEU
93
n
93
LEU
93
B
MET
94
n
94
MET
94
B
ILE
95
n
95
ILE
95
B
GLY
96
n
96
GLY
96
B
VAL
97
n
97
VAL
97
B
THR
98
n
98
THR
98
B
ASN
99
n
99
ASN
99
B
PRO
100
n
100
PRO
100
B
LEU
101
n
101
LEU
101
B
ALA
102
n
102
ALA
102
B
SER
103
n
103
SER
103
B
ALA
104
n
104
ALA
104
B
PRO
105
n
105
PRO
105
B
GLY
106
n
106
GLY
106
B
SER
107
n
107
SER
107
B
ILE
108
n
108
ILE
108
B
ARG
109
n
109
ARG
109
B
GLY
110
n
110
GLY
110
B
ASP
111
n
111
ASP
111
B
PHE
112
n
112
PHE
112
B
GLY
113
n
113
GLY
113
B
VAL
114
n
114
VAL
114
B
ASP
115
n
115
ASP
115
B
VAL
116
n
116
VAL
116
B
GLY
117
n
117
GLY
117
B
ARG
118
n
118
ARG
118
B
ASN
119
n
119
ASN
119
B
ILE
120
n
120
ILE
120
B
ILE
121
n
121
ILE
121
B
GLY
122
n
122
GLY
122
B
GLY
123
n
123
GLY
123
B
SER
124
n
124
SER
124
B
ASP
125
n
125
ASP
125
B
SER
126
n
126
SER
126
B
VAL
127
n
127
VAL
127
B
GLU
128
n
128
GLU
128
B
SER
129
n
129
SER
129
B
ALA
130
n
130
ALA
130
B
ASN
131
n
131
ASN
131
B
ARG
132
n
132
ARG
132
B
GLU
133
n
133
GLU
133
B
ILE
134
n
134
ILE
134
B
ALA
135
n
135
ALA
135
B
LEU
136
n
136
LEU
136
B
TRP
137
n
137
TRP
137
B
PHE
138
n
138
PHE
138
B
LYS
139
n
139
LYS
139
B
PRO
140
n
140
PRO
140
B
GLU
141
n
141
GLU
141
B
GLU
142
n
142
GLU
142
B
LEU
143
n
143
LEU
143
B
LEU
144
n
144
LEU
144
B
THR
145
n
145
THR
145
B
GLU
146
n
146
GLU
146
B
VAL
147
n
147
VAL
147
B
LYS
148
n
148
LYS
148
B
PRO
149
n
149
PRO
149
B
ASN
150
n
150
ASN
150
B
PRO
151
n
151
PRO
151
B
ASN
152
n
152
ASN
152
B
LEU
153
n
153
LEU
153
B
TYR
154
n
154
TYR
154
B
GLU
155
n
155
GLU
155
B
n
1
1
C
n
2
2
C
n
3
3
C
n
4
4
C
n
5
5
C
VAL
6
n
6
VAL
6
C
ASN
7
n
7
ASN
7
C
LYS
8
n
8
LYS
8
C
GLU
9
n
9
GLU
9
C
ARG
10
n
10
ARG
10
C
THR
11
n
11
THR
11
C
PHE
12
n
12
PHE
12
C
LEU
13
n
13
LEU
13
C
ALA
14
n
14
ALA
14
C
VAL
15
n
15
VAL
15
C
LYS
16
n
16
LYS
16
C
PRO
17
n
17
PRO
17
C
ASP
18
n
18
ASP
18
C
GLY
19
n
19
GLY
19
C
VAL
20
n
20
VAL
20
C
ALA
21
n
21
ALA
21
C
ARG
22
n
22
ARG
22
C
GLY
23
n
23
GLY
23
C
LEU
24
n
24
LEU
24
C
VAL
25
n
25
VAL
25
C
GLY
26
n
26
GLY
26
C
GLU
27
n
27
GLU
27
C
ILE
28
n
28
ILE
28
C
ILE
29
n
29
ILE
29
C
ALA
30
n
30
ALA
30
C
ARG
31
n
31
ARG
31
C
TYR
32
n
32
TYR
32
C
GLU
33
n
33
GLU
33
C
LYS
34
n
34
LYS
34
C
LYS
35
n
35
LYS
35
C
GLY
36
n
36
GLY
36
C
PHE
37
n
37
PHE
37
C
VAL
38
n
38
VAL
38
C
LEU
39
n
39
LEU
39
C
VAL
40
n
40
VAL
40
C
GLY
41
n
41
GLY
41
C
LEU
42
n
42
LEU
42
C
LYS
43
n
43
LYS
43
C
GLN
44
n
44
GLN
44
C
LEU
45
n
45
LEU
45
C
VAL
46
n
46
VAL
46
C
PRO
47
n
47
PRO
47
C
THR
48
n
48
THR
48
C
LYS
49
n
49
LYS
49
C
ASP
50
n
50
ASP
50
C
LEU
51
n
51
LEU
51
C
ALA
52
n
52
ALA
52
C
GLU
53
n
53
GLU
53
C
SER
54
n
54
SER
54
C
HIS
55
n
55
HIS
55
C
TYR
56
n
56
TYR
56
C
ALA
57
n
57
ALA
57
C
GLU
58
n
58
GLU
58
C
HIS
59
n
59
HIS
59
C
LYS
60
n
60
LYS
60
C
GLU
61
n
61
GLU
61
C
ARG
62
n
62
ARG
62
C
PRO
63
n
63
PRO
63
C
PHE
64
n
64
PHE
64
C
PHE
65
n
65
PHE
65
C
GLY
66
n
66
GLY
66
C
GLY
67
n
67
GLY
67
C
LEU
68
n
68
LEU
68
C
VAL
69
n
69
VAL
69
C
SER
70
n
70
SER
70
C
PHE
71
n
71
PHE
71
C
ILE
72
n
72
ILE
72
C
THR
73
n
73
THR
73
C
SER
74
n
74
SER
74
C
GLY
75
n
75
GLY
75
C
PRO
76
n
76
PRO
76
C
VAL
77
n
77
VAL
77
C
VAL
78
n
78
VAL
78
C
ALA
79
n
79
ALA
79
C
MET
80
n
80
MET
80
C
VAL
81
n
81
VAL
81
C
PHE
82
n
82
PHE
82
C
GLU
83
n
83
GLU
83
C
GLY
84
n
84
GLY
84
C
LYS
85
n
85
LYS
85
C
GLY
86
n
86
GLY
86
C
VAL
87
n
87
VAL
87
C
VAL
88
n
88
VAL
88
C
ALA
89
n
89
ALA
89
C
SER
90
n
90
SER
90
C
ALA
91
n
91
ALA
91
C
ARG
92
n
92
ARG
92
C
LEU
93
n
93
LEU
93
C
MET
94
n
94
MET
94
C
ILE
95
n
95
ILE
95
C
GLY
96
n
96
GLY
96
C
VAL
97
n
97
VAL
97
C
THR
98
n
98
THR
98
C
ASN
99
n
99
ASN
99
C
PRO
100
n
100
PRO
100
C
LEU
101
n
101
LEU
101
C
ALA
102
n
102
ALA
102
C
SER
103
n
103
SER
103
C
ALA
104
n
104
ALA
104
C
PRO
105
n
105
PRO
105
C
GLY
106
n
106
GLY
106
C
SER
107
n
107
SER
107
C
ILE
108
n
108
ILE
108
C
ARG
109
n
109
ARG
109
C
GLY
110
n
110
GLY
110
C
ASP
111
n
111
ASP
111
C
PHE
112
n
112
PHE
112
C
GLY
113
n
113
GLY
113
C
VAL
114
n
114
VAL
114
C
ASP
115
n
115
ASP
115
C
VAL
116
n
116
VAL
116
C
GLY
117
n
117
GLY
117
C
ARG
118
n
118
ARG
118
C
ASN
119
n
119
ASN
119
C
ILE
120
n
120
ILE
120
C
ILE
121
n
121
ILE
121
C
GLY
122
n
122
GLY
122
C
GLY
123
n
123
GLY
123
C
SER
124
n
124
SER
124
C
ASP
125
n
125
ASP
125
C
SER
126
n
126
SER
126
C
VAL
127
n
127
VAL
127
C
GLU
128
n
128
GLU
128
C
SER
129
n
129
SER
129
C
ALA
130
n
130
ALA
130
C
ASN
131
n
131
ASN
131
C
ARG
132
n
132
ARG
132
C
GLU
133
n
133
GLU
133
C
ILE
134
n
134
ILE
134
C
ALA
135
n
135
ALA
135
C
LEU
136
n
136
LEU
136
C
TRP
137
n
137
TRP
137
C
PHE
138
n
138
PHE
138
C
LYS
139
n
139
LYS
139
C
PRO
140
n
140
PRO
140
C
GLU
141
n
141
GLU
141
C
GLU
142
n
142
GLU
142
C
LEU
143
n
143
LEU
143
C
LEU
144
n
144
LEU
144
C
THR
145
n
145
THR
145
C
GLU
146
n
146
GLU
146
C
VAL
147
n
147
VAL
147
C
LYS
148
n
148
LYS
148
C
PRO
149
n
149
PRO
149
C
ASN
150
n
150
ASN
150
C
PRO
151
n
151
PRO
151
C
ASN
152
n
152
ASN
152
C
LEU
153
n
153
LEU
153
C
TYR
154
n
154
TYR
154
C
GLU
155
n
155
GLU
155
C
author_and_software_defined_assembly
PISA,PQS
6
hexameric
20270
-129
32280
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
D4T
160
E
O1A
D4T
1_555
86.1
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
D4T
160
E
O1C
D4T
1_555
92.9
A
D4T
160
E
O1A
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
D4T
160
E
O1C
D4T
1_555
103.3
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
725
L
O
HOH
1_555
96.5
A
D4T
160
E
O1A
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
725
L
O
HOH
1_555
174.2
A
D4T
160
E
O1C
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
725
L
O
HOH
1_555
81.7
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
726
L
O
HOH
1_555
88.9
A
D4T
160
E
O1A
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
726
L
O
HOH
1_555
81.1
A
D4T
160
E
O1C
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
726
L
O
HOH
1_555
175.3
A
HOH
725
L
O
HOH
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
726
L
O
HOH
1_555
93.7
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
174.2
A
D4T
160
E
O1A
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
90.8
A
D4T
160
E
O1C
D4T
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
92.7
A
HOH
725
L
O
HOH
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
86.1
A
HOH
726
L
O
HOH
1_555
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
85.7
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4T
161
A
H
O1C
D4T
1_555
98.9
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4T
161
A
H
O1B
D4T
1_555
92.7
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4T
161
A
H
O1B
D4T
1_555
85.9
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
PO4
162
B
F
O1
PO4
1_555
99.1
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
PO4
162
B
F
O1
PO4
1_555
20.3
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
PO4
162
B
F
O1
PO4
1_555
106.1
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1A
D4D
1_555
8.7
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1A
D4D
1_555
96.7
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1A
D4D
1_555
84.1
B
PO4
162
B
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1A
D4D
1_555
100.0
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1B
D4D
1_555
86.5
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1B
D4D
1_555
82.9
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1B
D4D
1_555
7.4
B
PO4
162
B
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1B
D4D
1_555
103.2
B
D4D
163
B
I
O1A
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
D4D
163
B
I
O1B
D4D
1_555
77.9
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
173.9
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
86.1
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
91.3
B
PO4
162
B
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
84.3
B
D4D
163
B
I
O1A
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
174.4
B
D4D
163
B
I
O1B
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
97.7
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
81.5
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
175.2
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
89.3
B
PO4
162
B
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
164.5
B
D4D
163
B
I
O1A
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
82.9
B
D4D
163
B
I
O1B
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
92.3
B
HOH
728
M
O
HOH
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
93.9
B
D4T
161
A
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
85.1
B
D4T
161
A
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
88.2
B
D4T
161
A
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
173.3
B
PO4
162
B
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
68.1
B
D4D
163
B
I
O1A
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
93.5
B
D4D
163
B
I
O1B
D4D
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
166.7
B
HOH
728
M
O
HOH
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
91.4
B
HOH
729
M
O
HOH
1_555
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
96.6
C
D4T
164
K
O1A
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
D4T
164
K
O1B
D4T
1_555
78.2
C
D4T
164
K
O1A
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
D4T
164
K
O1C
D4T
1_555
94.5
C
D4T
164
K
O1B
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
D4T
164
K
O1C
D4T
1_555
90.7
C
D4T
164
K
O1A
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
731
N
O
HOH
1_555
83.6
C
D4T
164
K
O1B
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
731
N
O
HOH
1_555
86.1
C
D4T
164
K
O1C
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
731
N
O
HOH
1_555
176.5
C
D4T
164
K
O1A
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
732
N
O
HOH
1_555
87.7
C
D4T
164
K
O1B
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
732
N
O
HOH
1_555
165.0
C
D4T
164
K
O1C
D4T
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
732
N
O
HOH
1_555
85.1
C
HOH
731
N
O
HOH
1_555
C
MG
167
J
MG
MG
1_555
C
HOH
732
N
O
HOH
1_555
97.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_675
x-y+1,-y+2,-z+2/3
crystal symmetry operation
0.0000000000
121.2747334444
101.3986666667
A
O
LEU
45
A
O
LEU
45
A
N
VAL
77
A
N
VAL
77
A
O
PHE
82
A
O
PHE
82
A
N
THR
11
A
N
THR
11
A
N
ALA
14
A
N
ALA
14
A
O
GLY
122
A
O
GLY
122
B
O
LEU
45
B
O
LEU
45
B
N
VAL
77
B
N
VAL
77
B
O
PHE
82
B
O
PHE
82
B
N
THR
11
B
N
THR
11
B
N
ALA
14
B
N
ALA
14
B
O
GLY
122
B
O
GLY
122
C
O
LEU
45
C
O
LEU
45
C
N
VAL
77
C
N
VAL
77
C
O
PHE
82
C
O
PHE
82
C
N
THR
11
C
N
THR
11
C
N
ALA
14
C
N
ALA
14
C
O
GLY
122
C
O
GLY
122
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
ASN
4
A
ASN
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
SER
2
B
SER
2
1
Y
1
B
THR
3
B
THR
3
1
Y
1
B
ASN
4
B
ASN
4
1
Y
1
B
LYS
5
B
LYS
5
1
Y
1
C
MET
1
C
MET
1
1
Y
1
C
SER
2
C
SER
2
1
Y
1
C
THR
3
C
THR
3
1
Y
1
C
ASN
4
C
ASN
4
1
Y
1
C
LYS
5
C
LYS
5
1
Y
1
4.42
0.50
120.30
124.72
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
62
62
62
N
1
-4.57
0.50
120.30
115.73
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
62
62
62
N
1
A
ILE
120
69.01
-46.77
1
B
ILE
120
67.18
-49.23
1
C
TYR
56
-96.97
31.35
1
C
ARG
62
-28.76
139.19
1
C
ILE
120
67.17
-51.00
1
C
PRO
151
-58.91
2.35
PROTEIN_REP.PARAM
PROTEIN.TOP
D4T_DNA-RNA_REP.PARAM
D4T_DNA-RNA.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
D4D_DNA-RNA.TOP
24.30
-0.39000
-0.02000
0.00000
-0.39000
0.00000
0.77000
0.2340000
0.006
0.2030000
0.2030000
1.85
29.73
1504
37405
4.000
99.1
RANDOM
1
RESTRAINED
THROUGHOUT
0.000
FLAT MODEL
54.40
0.40
0.26
0.21
5.00
0.18
0.11
1.85
29.73
344
3883
116
0
3423
0.013
1.80
22.90
1.04
1.24
1.500
1.76
2.000
1.92
2.000
2.66
2.500
0.2870000
0.020
0.2330000
1.97
207
5892
6
3.40
98.70
16.40
1.850
29.730
1F3F
2.000
0.0710000
1
5.000
99.1
0.3280000
1.85
1.97
1
98.7
phasing
AMoRE
refinement
CNS
1.0
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
STRUCTURE OF THE H122G NUCLEOSIDE DIPHOSPHATE KINASE / D4T-TRIPHOSPHATE.MG COMPLEX
1
N
N
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
2
N
N
3
N
N
5
N
N
2
N
N
3
N
N
6
N
N
6
N
N
6
N
N
A
LYS
16
A
LYS
16
HELX_P
A
ARG
22
A
ARG
22
1
1
7
A
LEU
24
A
LEU
24
HELX_P
A
GLY
36
A
GLY
36
1
2
13
A
THR
48
A
THR
48
HELX_P
A
TYR
56
A
TYR
56
1
3
9
A
ALA
57
A
ALA
57
HELX_P
A
LYS
60
A
LYS
60
5
4
4
A
PHE
64
A
PHE
64
HELX_P
A
THR
73
A
THR
73
1
5
10
A
GLY
86
A
GLY
86
HELX_P
A
GLY
96
A
GLY
96
1
6
11
A
ASN
99
A
ASN
99
HELX_P
A
SER
103
A
SER
103
5
7
5
A
SER
107
A
SER
107
HELX_P
A
GLY
113
A
GLY
113
1
8
7
A
SER
126
A
SER
126
HELX_P
A
PHE
138
A
PHE
138
1
9
13
A
LYS
139
A
LYS
139
HELX_P
A
LEU
143
A
LEU
143
5
10
5
B
LYS
16
B
LYS
16
HELX_P
B
ARG
22
B
ARG
22
1
11
7
B
LEU
24
B
LEU
24
HELX_P
B
GLY
36
B
GLY
36
1
12
13
B
THR
48
B
THR
48
HELX_P
B
TYR
56
B
TYR
56
1
13
9
B
ALA
57
B
ALA
57
HELX_P
B
LYS
60
B
LYS
60
5
14
4
B
PHE
64
B
PHE
64
HELX_P
B
THR
73
B
THR
73
1
15
10
B
GLY
86
B
GLY
86
HELX_P
B
GLY
96
B
GLY
96
1
16
11
B
ASN
99
B
ASN
99
HELX_P
B
SER
103
B
SER
103
5
17
5
B
SER
107
B
SER
107
HELX_P
B
GLY
113
B
GLY
113
1
18
7
B
SER
126
B
SER
126
HELX_P
B
PHE
138
B
PHE
138
1
19
13
B
LYS
139
B
LYS
139
HELX_P
B
LEU
143
B
LEU
143
5
20
5
C
LYS
16
C
LYS
16
HELX_P
C
ARG
22
C
ARG
22
1
21
7
C
LEU
24
C
LEU
24
HELX_P
C
GLY
36
C
GLY
36
1
22
13
C
THR
48
C
THR
48
HELX_P
C
TYR
56
C
TYR
56
1
23
9
C
ALA
57
C
ALA
57
HELX_P
C
LYS
60
C
LYS
60
5
24
4
C
PHE
64
C
PHE
64
HELX_P
C
THR
73
C
THR
73
1
25
10
C
GLY
86
C
GLY
86
HELX_P
C
GLY
96
C
GLY
96
1
26
11
C
ASN
99
C
ASN
99
HELX_P
C
SER
103
C
SER
103
5
27
5
C
SER
107
C
SER
107
HELX_P
C
GLY
113
C
GLY
113
1
28
7
C
SER
126
C
SER
126
HELX_P
C
PHE
138
C
PHE
138
1
29
13
C
LYS
139
C
LYS
139
HELX_P
C
LEU
143
C
LEU
143
5
30
5
metalc
2.094
A
D4T
160
E
O1B
D4T
1_555
A
MG
165
D
MG
MG
1_555
metalc
1.988
A
D4T
160
E
O1A
D4T
1_555
A
MG
165
D
MG
MG
1_555
metalc
1.976
A
D4T
160
E
O1C
D4T
1_555
A
MG
165
D
MG
MG
1_555
metalc
2.294
A
MG
165
D
MG
MG
1_555
A
HOH
725
L
O
HOH
1_555
metalc
2.163
A
MG
165
D
MG
MG
1_555
A
HOH
726
L
O
HOH
1_555
metalc
2.092
A
MG
165
D
MG
MG
1_555
A
HOH
727
L
O
HOH
1_555
metalc
2.109
A
B
D4T
161
H
O1A
D4T
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.206
A
B
D4T
161
H
O1C
D4T
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.072
A
B
D4T
161
H
O1B
D4T
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.334
B
B
PO4
162
F
O1
PO4
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.334
B
B
D4D
163
I
O1A
D4D
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.043
B
B
D4D
163
I
O1B
D4D
1_555
B
MG
166
G
MG
MG
1_555
metalc
2.334
B
MG
166
G
MG
MG
1_555
B
HOH
728
M
O
HOH
1_555
metalc
1.982
B
MG
166
G
MG
MG
1_555
B
HOH
729
M
O
HOH
1_555
metalc
2.081
B
MG
166
G
MG
MG
1_555
B
HOH
730
M
O
HOH
1_555
metalc
2.323
C
D4T
164
K
O1A
D4T
1_555
C
MG
167
J
MG
MG
1_555
metalc
2.237
C
D4T
164
K
O1B
D4T
1_555
C
MG
167
J
MG
MG
1_555
metalc
1.984
C
D4T
164
K
O1C
D4T
1_555
C
MG
167
J
MG
MG
1_555
metalc
2.169
C
MG
167
J
MG
MG
1_555
C
HOH
731
N
O
HOH
1_555
metalc
2.361
C
MG
167
J
MG
MG
1_555
C
HOH
732
N
O
HOH
1_555
TRANSFERASE
NUCLEOSIDE DIPHOSPHATE KINASE, ANTI-HIV NUCLEOSIDE ANALOGUE, PHOSPHORYLATION, CH...O BOND, TRANSFERASE
NDKC_DICDI
UNP
1
1
P22887
MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM
VFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE
1
155
1F3F
1
155
P22887
A
1
1
155
1
155
1F3F
1
155
P22887
B
1
1
155
1
155
1F3F
1
155
P22887
C
1
1
155
1
HIS
engineered mutation
GLY
122
1F3F
A
P22887
UNP
122
122
2
HIS
engineered mutation
GLY
122
1F3F
B
P22887
UNP
122
122
3
HIS
engineered mutation
GLY
122
1F3F
C
P22887
UNP
122
122
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
38
A
VAL
38
A
LEU
45
A
LEU
45
A
VAL
77
A
VAL
77
A
GLU
83
A
GLU
83
A
ARG
10
A
ARG
10
A
VAL
15
A
VAL
15
A
ILE
121
A
ILE
121
A
GLY
123
A
GLY
123
B
VAL
38
B
VAL
38
B
LEU
45
B
LEU
45
B
VAL
77
B
VAL
77
B
GLU
83
B
GLU
83
B
ARG
10
B
ARG
10
B
VAL
15
B
VAL
15
B
ILE
121
B
ILE
121
B
GLY
123
B
GLY
123
C
VAL
38
C
VAL
38
C
LEU
45
C
LEU
45
C
VAL
77
C
VAL
77
C
GLU
83
C
GLU
83
C
ARG
10
C
ARG
10
C
VAL
15
C
VAL
15
C
ILE
121
C
ILE
121
C
GLY
123
C
GLY
123
BINDING SITE FOR RESIDUE PO4 B 162
B
PO4
162
Software
11
BINDING SITE FOR RESIDUE MG A 165
A
MG
165
Software
4
BINDING SITE FOR RESIDUE MG B 166
B
MG
166
Software
6
BINDING SITE FOR RESIDUE MG C 167
C
MG
167
Software
3
BINDING SITE FOR RESIDUE D4T A 160
A
D4T
160
Software
20
BINDING SITE FOR RESIDUE D4T B 161
B
D4T
161
Software
21
BINDING SITE FOR RESIDUE D4D B 163
B
D4D
163
Software
18
BINDING SITE FOR RESIDUE D4T C 164
C
D4T
164
Software
16
B
LYS
16
B
LYS
16
11
1_555
B
HIS
55
B
HIS
55
11
1_555
B
TYR
56
B
TYR
56
11
1_555
B
ARG
92
B
ARG
92
11
1_555
B
GLY
122
B
GLY
122
11
1_555
B
GLY
123
B
GLY
123
11
1_555
B
D4D
163
I
D4D
11
1_555
B
MG
166
G
MG
11
1_555
B
HOH
728
M
HOH
11
1_555
B
HOH
730
M
HOH
11
1_555
B
HOH
843
M
HOH
11
1_555
A
D4T
160
E
D4T
4
1_555
A
HOH
725
L
HOH
4
1_555
A
HOH
726
L
HOH
4
1_555
A
HOH
727
L
HOH
4
1_555
B
D4T
161
H
D4T
6
1_555
B
PO4
162
F
PO4
6
1_555
B
D4D
163
I
D4D
6
1_555
B
HOH
728
M
HOH
6
1_555
B
HOH
729
M
HOH
6
1_555
B
HOH
730
M
HOH
6
1_555
C
D4T
164
K
D4T
3
1_555
C
HOH
731
N
HOH
3
1_555
C
HOH
732
N
HOH
3
1_555
A
LYS
16
A
LYS
16
20
1_555
A
TYR
56
A
TYR
56
20
1_555
A
HIS
59
A
HIS
59
20
1_555
A
PHE
64
A
PHE
64
20
1_555
A
LEU
68
A
LEU
68
20
1_555
A
ARG
92
A
ARG
92
20
1_555
A
THR
98
A
THR
98
20
1_555
A
ARG
109
A
ARG
109
20
1_555
A
VAL
116
A
VAL
116
20
1_555
A
GLY
117
A
GLY
117
20
1_555
A
ASN
119
A
ASN
119
20
1_555
A
GLY
122
A
GLY
122
20
1_555
A
GLY
123
A
GLY
123
20
1_555
A
MG
165
D
MG
20
1_555
A
HOH
664
L
HOH
20
1_555
A
HOH
725
L
HOH
20
1_555
A
HOH
726
L
HOH
20
1_555
A
HOH
727
L
HOH
20
1_555
A
HOH
809
L
HOH
20
1_555
A
HOH
810
L
HOH
20
1_555
B
LYS
16
B
LYS
16
21
1_555
B
TYR
56
B
TYR
56
21
1_555
B
HIS
59
B
HIS
59
21
1_555
B
PHE
64
B
PHE
64
21
1_555
B
LEU
68
B
LEU
68
21
1_555
B
ARG
92
B
ARG
92
21
1_555
B
THR
98
B
THR
98
21
1_555
B
ARG
109
B
ARG
109
21
1_555
B
VAL
116
B
VAL
116
21
1_555
B
GLY
117
B
GLY
117
21
1_555
B
ASN
119
B
ASN
119
21
1_555
B
GLY
122
B
GLY
122
21
1_555
B
GLY
123
B
GLY
123
21
1_555
B
MG
166
G
MG
21
1_555
B
HOH
728
M
HOH
21
1_555
B
HOH
729
M
HOH
21
1_555
B
HOH
730
M
HOH
21
1_555
B
HOH
784
M
HOH
21
1_555
B
HOH
811
M
HOH
21
1_555
B
HOH
828
M
HOH
21
1_555
B
HOH
843
M
HOH
21
1_555
B
LYS
16
B
LYS
16
18
1_555
B
HIS
59
B
HIS
59
18
1_555
B
PHE
64
B
PHE
64
18
1_555
B
LEU
68
B
LEU
68
18
1_555
B
ARG
92
B
ARG
92
18
1_555
B
THR
98
B
THR
98
18
1_555
B
ARG
109
B
ARG
109
18
1_555
B
VAL
116
B
VAL
116
18
1_555
B
GLY
117
B
GLY
117
18
1_555
B
ASN
119
B
ASN
119
18
1_555
B
PO4
162
F
PO4
18
1_555
B
MG
166
G
MG
18
1_555
B
HOH
705
M
HOH
18
1_555
B
HOH
723
M
HOH
18
1_555
B
HOH
729
M
HOH
18
1_555
B
HOH
784
M
HOH
18
1_555
B
HOH
811
M
HOH
18
1_555
B
HOH
828
M
HOH
18
1_555
C
LYS
16
C
LYS
16
16
1_555
C
TYR
56
C
TYR
56
16
1_555
C
HIS
59
C
HIS
59
16
1_555
C
PHE
64
C
PHE
64
16
1_555
C
LEU
68
C
LEU
68
16
1_555
C
ARG
92
C
ARG
92
16
1_555
C
THR
98
C
THR
98
16
1_555
C
ARG
109
C
ARG
109
16
1_555
C
VAL
116
C
VAL
116
16
1_555
C
GLY
117
C
GLY
117
16
1_555
C
ASN
119
C
ASN
119
16
1_555
C
GLY
122
C
GLY
122
16
1_555
C
GLY
123
C
GLY
123
16
1_555
C
MG
167
J
MG
16
1_555
C
HOH
731
N
HOH
16
1_555
C
HOH
732
N
HOH
16
1_555
152
P 31 2 1