0.009129
0.000000
0.000000
0.000000
0.009129
0.000000
0.000000
0.000000
0.005670
0.00000
0.00000
0.00000
Latek, R.R.
Unanue, E.R.
Fremont, D.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
109.540
109.540
176.360
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
R
C
N
251
R
C
N
252
R
C
N
253
S
C
N
254
R
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
N
N
259
N
O
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
O
N
264
N
O
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
N
291
N
O
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
O
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
R
C
N
339
N
O
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
Y
359
N
N
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
N
389
N
O
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
N
N
403
S
C
N
404
N
C
N
405
N
O
N
406
N
C
N
407
N
C
N
408
N
C
N
409
N
O
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
Y
347
N
doub
Y
348
N
sing
Y
349
N
sing
N
350
N
sing
Y
351
N
doub
Y
352
N
sing
Y
353
N
sing
N
354
N
sing
Y
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
doub
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
US
Immunity
IUNIEH
2048
1074-7613
12
699
710
10.1016/S1074-7613(00)80220-4
10894169
Structural basis of peptide binding and presentation by the type I diabetes-associated MHC class II molecule of NOD mice.
2000
10.2210/pdb1f3j/pdb
pdb_00001f3j
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
YALE MIRRORS
IMAGE PLATE
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU
20792.258
H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN
A-D ALPHA CHAIN
2
man
polymer
22179.779
MHC CLASS II NOD
BETA CHAIN
2
man
polymer
1671.880
LYSOZYME C
RESIDUES 11-24, CORRESPOND TO BINDING SITES P-3 TO P11
2
man
polymer
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
6
man
non-polymer
18.015
water
72
nat
water
no
no
IEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNF
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPE
IEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNF
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPE
A,D
polypeptide(L)
no
no
ERHFVHQFKGECYFTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYNKQYLERTRAELDTACRHNYEE
TEVPTSLRRLEQPNVAISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMT
PHQGEVYTCHVEHPSLKSPITVEWRAQ
ERHFVHQFKGECYFTNGTQRIRLVTRYIYNREEYLRFDSDVGEYRAVTELGRHSAEYYNKQYLERTRAELDTACRHNYEE
TEVPTSLRRLEQPNVAISLSRTEALNHHNTLVCSVTDFYPAKIKVRWFRNGQEETVGVSSTQLIRNGDWTFQVLVMLEMT
PHQGEVYTCHVEHPSLKSPITVEWRAQ
B,E
polypeptide(L)
no
no
AMKRHGLDNYRGYS
AMKRHGLDNYRGYS
P,Q
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
fall armyworm
Spodoptera
sample
10090
Mus musculus
7108
Spodoptera frugiperda
BACULOVIRUS
house mouse
Mus
fall armyworm
Spodoptera
sample
10090
Mus musculus
7108
Spodoptera frugiperda
BACULOVIRUS
chicken
Gallus
fall armyworm
Spodoptera
sample
9031
Gallus gallus
7108
Spodoptera frugiperda
BACULOVIRUS
1
2.96
58.46
4.4
pH 4.4
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Refinement description
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2000-09-20
1
1
2008-04-27
1
2
2011-07-13
1
3
2011-11-16
1
4
2017-10-04
1
5
2020-07-29
1
6
2023-08-09
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2000-06-04
REL
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
THIS ENTRY CONTAINS COORDINATES FOR THE EXTRACELLULAR
DOMAINS OF THE MURINE MHC CLASS II MOLECULE I-Ag7 WITH
PEPTIDE FROM HEN EGG WHITE LYSOZYME (11 - 24).
THE COMPLEX WAS PRODUCED AS A CHIMERIC MOLECULE
WITH THE PEPTIDE COVALENTLY ATTACHED TO THE I-AK
BETA CHAIN VIA A POLYPEPTIDE LINKER.
MODIFIED LEUCINE ZIPPER TAILS WERE ATTACHED
TO THE ALPHA AND BETA CHAIN TERMINI.
THROMBIN TREATMENT RELEASED THE ZIPPER TAILS
AND CUT THE PEPTIDE LINKER.
1IAK
PDB ENTRY 1IAK
PDB
experimental model
NAG
1
4
NAG
NAG
1001
A
NAG
2
4
NAG
NAG
1002
A
NAG
3
4
NAG
NAG
1003
B
NAG
1
4
NAG
NAG
1001
D
NAG
2
4
NAG
NAG
1002
D
NAG
3
4
NAG
NAG
1003
E
WAT
3
5
HOH
HOH
1003
A
WAT
5
5
HOH
HOH
1004
A
WAT
19
5
HOH
HOH
1005
A
WAT
21
5
HOH
HOH
1006
A
WAT
23
5
HOH
HOH
1007
A
WAT
27
5
HOH
HOH
1008
A
WAT
32
5
HOH
HOH
1009
A
WAT
36
5
HOH
HOH
1010
A
WAT
39
5
HOH
HOH
1011
A
WAT
40
5
HOH
HOH
1012
A
WAT
42
5
HOH
HOH
1013
A
WAT
46
5
HOH
HOH
1014
A
WAT
50
5
HOH
HOH
1015
A
WAT
52
5
HOH
HOH
1016
A
WAT
55
5
HOH
HOH
1017
A
WAT
56
5
HOH
HOH
1018
A
WAT
60
5
HOH
HOH
1019
A
WAT
68
5
HOH
HOH
1020
A
WAT
72
5
HOH
HOH
1021
A
WAT
1
5
HOH
HOH
1004
B
WAT
12
5
HOH
HOH
1005
B
WAT
13
5
HOH
HOH
1006
B
WAT
17
5
HOH
HOH
1007
B
WAT
20
5
HOH
HOH
1008
B
WAT
24
5
HOH
HOH
1009
B
WAT
28
5
HOH
HOH
1010
B
WAT
30
5
HOH
HOH
1011
B
WAT
31
5
HOH
HOH
1012
B
WAT
34
5
HOH
HOH
1013
B
WAT
35
5
HOH
HOH
1014
B
WAT
38
5
HOH
HOH
1015
B
WAT
43
5
HOH
HOH
1016
B
WAT
44
5
HOH
HOH
1017
B
WAT
45
5
HOH
HOH
1018
B
WAT
48
5
HOH
HOH
1019
B
WAT
49
5
HOH
HOH
1020
B
WAT
51
5
HOH
HOH
1021
B
WAT
57
5
HOH
HOH
1022
B
WAT
59
5
HOH
HOH
1023
B
WAT
61
5
HOH
HOH
1024
B
WAT
62
5
HOH
HOH
1025
B
WAT
63
5
HOH
HOH
1026
B
WAT
64
5
HOH
HOH
1027
B
WAT
70
5
HOH
HOH
1028
B
WAT
71
5
HOH
HOH
1029
B
WAT
2
5
HOH
HOH
2
P
WAT
4
5
HOH
HOH
4
P
WAT
8
5
HOH
HOH
1003
D
WAT
10
5
HOH
HOH
1004
D
WAT
11
5
HOH
HOH
1005
D
WAT
15
5
HOH
HOH
1006
D
WAT
18
5
HOH
HOH
1007
D
WAT
22
5
HOH
HOH
1008
D
WAT
26
5
HOH
HOH
1009
D
WAT
33
5
HOH
HOH
1010
D
WAT
58
5
HOH
HOH
1011
D
WAT
65
5
HOH
HOH
1012
D
WAT
66
5
HOH
HOH
1013
D
WAT
67
5
HOH
HOH
1014
D
WAT
6
5
HOH
HOH
1004
E
WAT
14
5
HOH
HOH
1005
E
WAT
16
5
HOH
HOH
1006
E
WAT
25
5
HOH
HOH
1007
E
WAT
29
5
HOH
HOH
1008
E
WAT
37
5
HOH
HOH
1009
E
WAT
41
5
HOH
HOH
1010
E
WAT
47
5
HOH
HOH
1011
E
WAT
53
5
HOH
HOH
1012
E
WAT
54
5
HOH
HOH
1013
E
WAT
69
5
HOH
HOH
1014
E
WAT
7
5
HOH
HOH
7
Q
WAT
9
5
HOH
HOH
9
Q
ILE
1
n
1
ILE
1
A
GLU
2
n
2
GLU
2
A
ALA
3
n
3
ALA
3
A
ASP
4
n
4
ASP
4
A
HIS
5
n
5
HIS
5
A
VAL
6
n
6
VAL
6
A
GLY
7
n
7
GLY
7
A
PHE
8
n
8
PHE
8
A
TYR
9
n
9
TYR
9
A
GLY
9
n
10
A
GLY
9
A
THR
10
n
11
THR
10
A
THR
11
n
12
THR
11
A
VAL
12
n
13
VAL
12
A
TYR
13
n
14
TYR
13
A
GLN
14
n
15
GLN
14
A
SER
15
n
16
SER
15
A
PRO
16
n
17
PRO
16
A
GLY
17
n
18
GLY
17
A
ASP
18
n
19
ASP
18
A
ILE
19
n
20
ILE
19
A
GLY
20
n
21
GLY
20
A
GLN
21
n
22
GLN
21
A
TYR
22
n
23
TYR
22
A
THR
23
n
24
THR
23
A
HIS
24
n
25
HIS
24
A
GLU
25
n
26
GLU
25
A
PHE
26
n
27
PHE
26
A
ASP
27
n
28
ASP
27
A
GLY
28
n
29
GLY
28
A
ASP
29
n
30
ASP
29
A
GLU
30
n
31
GLU
30
A
LEU
31
n
32
LEU
31
A
PHE
32
n
33
PHE
32
A
TYR
33
n
34
TYR
33
A
VAL
34
n
35
VAL
34
A
ASP
35
n
36
ASP
35
A
LEU
36
n
37
LEU
36
A
ASP
37
n
38
ASP
37
A
LYS
38
n
39
LYS
38
A
LYS
39
n
40
LYS
39
A
LYS
40
n
41
LYS
40
A
THR
41
n
42
THR
41
A
VAL
42
n
43
VAL
42
A
TRP
43
n
44
TRP
43
A
ARG
44
n
45
ARG
44
A
LEU
45
n
46
LEU
45
A
PRO
46
n
47
PRO
46
A
GLU
47
n
48
GLU
47
A
PHE
48
n
49
PHE
48
A
GLY
49
n
50
GLY
49
A
GLN
50
n
51
GLN
50
A
LEU
51
n
52
LEU
51
A
ILE
52
n
53
ILE
52
A
LEU
53
n
54
LEU
53
A
PHE
54
n
55
PHE
54
A
GLU
55
n
56
GLU
55
A
PRO
56
n
57
PRO
56
A
GLN
57
n
58
GLN
57
A
GLY
58
n
59
GLY
58
A
GLY
59
n
60
GLY
59
A
LEU
60
n
61
LEU
60
A
GLN
61
n
62
GLN
61
A
ASN
62
n
63
ASN
62
A
ILE
63
n
64
ILE
63
A
ALA
64
n
65
ALA
64
A
ALA
65
n
66
ALA
65
A
GLU
66
n
67
GLU
66
A
LYS
67
n
68
LYS
67
A
HIS
68
n
69
HIS
68
A
ASN
69
n
70
ASN
69
A
LEU
70
n
71
LEU
70
A
GLY
71
n
72
GLY
71
A
ILE
72
n
73
ILE
72
A
LEU
73
n
74
LEU
73
A
THR
74
n
75
THR
74
A
LYS
75
n
76
LYS
75
A
ARG
76
n
77
ARG
76
A
SER
77
n
78
SER
77
A
ASN
78
n
79
ASN
78
A
PHE
79
n
80
PHE
79
A
THR
80
n
81
THR
80
A
PRO
81
n
82
PRO
81
A
ALA
82
n
83
ALA
82
A
THR
83
n
84
THR
83
A
ASN
84
n
85
ASN
84
A
GLU
85
n
86
GLU
85
A
ALA
86
n
87
ALA
86
A
PRO
87
n
88
PRO
87
A
GLN
88
n
89
GLN
88
A
ALA
89
n
90
ALA
89
A
THR
90
n
91
THR
90
A
VAL
91
n
92
VAL
91
A
PHE
92
n
93
PHE
92
A
PRO
93
n
94
PRO
93
A
LYS
94
n
95
LYS
94
A
SER
95
n
96
SER
95
A
PRO
96
n
97
PRO
96
A
VAL
97
n
98
VAL
97
A
LEU
98
n
99
LEU
98
A
LEU
99
n
100
LEU
99
A
GLY
100
n
101
GLY
100
A
GLN
101
n
102
GLN
101
A
PRO
102
n
103
PRO
102
A
ASN
103
n
104
ASN
103
A
THR
104
n
105
THR
104
A
LEU
105
n
106
LEU
105
A
ILE
106
n
107
ILE
106
A
CYS
107
n
108
CYS
107
A
PHE
108
n
109
PHE
108
A
VAL
109
n
110
VAL
109
A
ASP
110
n
111
ASP
110
A
ASN
111
n
112
ASN
111
A
ILE
112
n
113
ILE
112
A
PHE
113
n
114
PHE
113
A
PRO
114
n
115
PRO
114
A
PRO
115
n
116
PRO
115
A
VAL
116
n
117
VAL
116
A
ILE
117
n
118
ILE
117
A
ASN
118
n
119
ASN
118
A
ILE
119
n
120
ILE
119
A
THR
120
n
121
THR
120
A
TRP
121
n
122
TRP
121
A
LEU
122
n
123
LEU
122
A
ARG
123
n
124
ARG
123
A
ASN
124
n
125
ASN
124
A
SER
125
n
126
SER
125
A
LYS
126
n
127
LYS
126
A
SER
127
n
128
SER
127
A
VAL
128
n
129
VAL
128
A
THR
129
n
130
THR
129
A
ASP
130
n
131
ASP
130
A
GLY
131
n
132
GLY
131
A
VAL
132
n
133
VAL
132
A
TYR
133
n
134
TYR
133
A
GLU
134
n
135
GLU
134
A
THR
135
n
136
THR
135
A
SER
136
n
137
SER
136
A
PHE
137
n
138
PHE
137
A
LEU
138
n
139
LEU
138
A
VAL
139
n
140
VAL
139
A
ASN
140
n
141
ASN
140
A
ARG
141
n
142
ARG
141
A
ASP
142
n
143
ASP
142
A
HIS
143
n
144
HIS
143
A
SER
144
n
145
SER
144
A
PHE
145
n
146
PHE
145
A
HIS
146
n
147
HIS
146
A
LYS
147
n
148
LYS
147
A
LEU
148
n
149
LEU
148
A
SER
149
n
150
SER
149
A
TYR
150
n
151
TYR
150
A
LEU
151
n
152
LEU
151
A
THR
152
n
153
THR
152
A
PHE
153
n
154
PHE
153
A
ILE
154
n
155
ILE
154
A
PRO
155
n
156
PRO
155
A
SER
156
n
157
SER
156
A
ASP
157
n
158
ASP
157
A
ASP
158
n
159
ASP
158
A
ASP
159
n
160
ASP
159
A
ILE
160
n
161
ILE
160
A
TYR
161
n
162
TYR
161
A
ASP
162
n
163
ASP
162
A
CYS
163
n
164
CYS
163
A
LYS
164
n
165
LYS
164
A
VAL
165
n
166
VAL
165
A
GLU
166
n
167
GLU
166
A
HIS
167
n
168
HIS
167
A
TRP
168
n
169
TRP
168
A
GLY
169
n
170
GLY
169
A
LEU
170
n
171
LEU
170
A
GLU
171
n
172
GLU
171
A
GLU
172
n
173
GLU
172
A
PRO
173
n
174
PRO
173
A
VAL
174
n
175
VAL
174
A
LEU
175
n
176
LEU
175
A
LYS
176
n
177
LYS
176
A
HIS
177
n
178
HIS
177
A
TRP
178
n
179
TRP
178
A
GLU
179
n
180
GLU
179
A
PRO
180
n
181
PRO
180
A
GLU
181
n
182
GLU
181
A
GLU
4
n
1
GLU
4
B
ARG
5
n
2
ARG
5
B
HIS
6
n
3
HIS
6
B
PHE
7
n
4
PHE
7
B
VAL
8
n
5
VAL
8
B
HIS
9
n
6
HIS
9
B
GLN
10
n
7
GLN
10
B
PHE
11
n
8
PHE
11
B
LYS
12
n
9
LYS
12
B
GLY
13
n
10
GLY
13
B
GLU
14
n
11
GLU
14
B
CYS
15
n
12
CYS
15
B
TYR
16
n
13
TYR
16
B
PHE
17
n
14
PHE
17
B
THR
18
n
15
THR
18
B
ASN
19
n
16
ASN
19
B
GLY
20
n
17
GLY
20
B
THR
21
n
18
THR
21
B
GLN
22
n
19
GLN
22
B
ARG
23
n
20
ARG
23
B
ILE
24
n
21
ILE
24
B
ARG
25
n
22
ARG
25
B
LEU
26
n
23
LEU
26
B
VAL
27
n
24
VAL
27
B
THR
28
n
25
THR
28
B
ARG
29
n
26
ARG
29
B
TYR
30
n
27
TYR
30
B
ILE
31
n
28
ILE
31
B
TYR
32
n
29
TYR
32
B
ASN
33
n
30
ASN
33
B
ARG
34
n
31
ARG
34
B
GLU
35
n
32
GLU
35
B
GLU
36
n
33
GLU
36
B
TYR
37
n
34
TYR
37
B
LEU
38
n
35
LEU
38
B
ARG
39
n
36
ARG
39
B
PHE
40
n
37
PHE
40
B
ASP
41
n
38
ASP
41
B
SER
42
n
39
SER
42
B
ASP
43
n
40
ASP
43
B
VAL
44
n
41
VAL
44
B
GLY
45
n
42
GLY
45
B
GLU
46
n
43
GLU
46
B
TYR
47
n
44
TYR
47
B
ARG
48
n
45
ARG
48
B
ALA
49
n
46
ALA
49
B
VAL
50
n
47
VAL
50
B
THR
51
n
48
THR
51
B
GLU
52
n
49
GLU
52
B
LEU
53
n
50
LEU
53
B
GLY
54
n
51
GLY
54
B
ARG
55
n
52
ARG
55
B
HIS
56
n
53
HIS
56
B
SER
57
n
54
SER
57
B
ALA
58
n
55
ALA
58
B
GLU
59
n
56
GLU
59
B
TYR
60
n
57
TYR
60
B
TYR
61
n
58
TYR
61
B
ASN
62
n
59
ASN
62
B
LYS
63
n
60
LYS
63
B
GLN
64
n
61
GLN
64
B
TYR
67
n
62
TYR
67
B
LEU
68
n
63
LEU
68
B
GLU
69
n
64
GLU
69
B
ARG
70
n
65
ARG
70
B
THR
71
n
66
THR
71
B
ARG
72
n
67
ARG
72
B
ALA
73
n
68
ALA
73
B
GLU
74
n
69
GLU
74
B
LEU
75
n
70
LEU
75
B
ASP
76
n
71
ASP
76
B
THR
77
n
72
THR
77
B
ALA
78
n
73
ALA
78
B
CYS
79
n
74
CYS
79
B
ARG
80
n
75
ARG
80
B
HIS
81
n
76
HIS
81
B
ASN
82
n
77
ASN
82
B
TYR
83
n
78
TYR
83
B
GLU
84
n
79
GLU
84
B
GLU
84
n
80
A
GLU
84
B
THR
85
n
81
THR
85
B
GLU
86
n
82
GLU
86
B
VAL
87
n
83
VAL
87
B
PRO
88
n
84
PRO
88
B
THR
89
n
85
THR
89
B
SER
90
n
86
SER
90
B
LEU
91
n
87
LEU
91
B
ARG
92
n
88
ARG
92
B
ARG
93
n
89
ARG
93
B
LEU
94
n
90
LEU
94
B
GLU
95
n
91
GLU
95
B
GLN
96
n
92
GLN
96
B
PRO
97
n
93
PRO
97
B
ASN
98
n
94
ASN
98
B
VAL
99
n
95
VAL
99
B
ALA
100
n
96
ALA
100
B
ILE
101
n
97
ILE
101
B
SER
102
n
98
SER
102
B
LEU
103
n
99
LEU
103
B
SER
104
n
100
SER
104
B
ARG
105
n
101
ARG
105
B
THR
106
n
102
THR
106
B
GLU
107
n
103
GLU
107
B
ALA
108
n
104
ALA
108
B
LEU
109
n
105
LEU
109
B
ASN
110
n
106
ASN
110
B
HIS
111
n
107
HIS
111
B
HIS
112
n
108
HIS
112
B
ASN
113
n
109
ASN
113
B
THR
114
n
110
THR
114
B
LEU
115
n
111
LEU
115
B
VAL
116
n
112
VAL
116
B
CYS
117
n
113
CYS
117
B
SER
118
n
114
SER
118
B
VAL
119
n
115
VAL
119
B
THR
120
n
116
THR
120
B
ASP
121
n
117
ASP
121
B
PHE
122
n
118
PHE
122
B
TYR
123
n
119
TYR
123
B
PRO
124
n
120
PRO
124
B
ALA
125
n
121
ALA
125
B
LYS
126
n
122
LYS
126
B
ILE
127
n
123
ILE
127
B
LYS
128
n
124
LYS
128
B
VAL
129
n
125
VAL
129
B
ARG
130
n
126
ARG
130
B
TRP
131
n
127
TRP
131
B
PHE
132
n
128
PHE
132
B
ARG
133
n
129
ARG
133
B
ASN
134
n
130
ASN
134
B
GLY
135
n
131
GLY
135
B
GLN
136
n
132
GLN
136
B
GLU
137
n
133
GLU
137
B
GLU
138
n
134
GLU
138
B
THR
139
n
135
THR
139
B
VAL
140
n
136
VAL
140
B
GLY
141
n
137
GLY
141
B
VAL
142
n
138
VAL
142
B
SER
143
n
139
SER
143
B
SER
144
n
140
SER
144
B
THR
145
n
141
THR
145
B
GLN
146
n
142
GLN
146
B
LEU
147
n
143
LEU
147
B
ILE
148
n
144
ILE
148
B
ARG
149
n
145
ARG
149
B
ASN
150
n
146
ASN
150
B
GLY
151
n
147
GLY
151
B
ASP
152
n
148
ASP
152
B
TRP
153
n
149
TRP
153
B
THR
154
n
150
THR
154
B
PHE
155
n
151
PHE
155
B
GLN
156
n
152
GLN
156
B
VAL
157
n
153
VAL
157
B
LEU
158
n
154
LEU
158
B
VAL
159
n
155
VAL
159
B
MET
160
n
156
MET
160
B
LEU
161
n
157
LEU
161
B
GLU
162
n
158
GLU
162
B
MET
163
n
159
MET
163
B
THR
164
n
160
THR
164
B
PRO
165
n
161
PRO
165
B
HIS
166
n
162
HIS
166
B
GLN
167
n
163
GLN
167
B
GLY
168
n
164
GLY
168
B
GLU
169
n
165
GLU
169
B
VAL
170
n
166
VAL
170
B
TYR
171
n
167
TYR
171
B
THR
172
n
168
THR
172
B
CYS
173
n
169
CYS
173
B
HIS
174
n
170
HIS
174
B
VAL
175
n
171
VAL
175
B
GLU
176
n
172
GLU
176
B
HIS
177
n
173
HIS
177
B
PRO
178
n
174
PRO
178
B
SER
179
n
175
SER
179
B
LEU
180
n
176
LEU
180
B
LYS
181
n
177
LYS
181
B
SER
182
n
178
SER
182
B
PRO
183
n
179
PRO
183
B
ILE
184
n
180
ILE
184
B
THR
185
n
181
THR
185
B
VAL
186
n
182
VAL
186
B
GLU
187
n
183
GLU
187
B
TRP
188
n
184
TRP
188
B
ARG
189
n
185
ARG
189
B
ALA
190
n
186
ALA
190
B
GLN
191
n
187
GLN
191
B
ALA
11
n
1
ALA
11
P
MET
12
n
2
MET
12
P
LYS
13
n
3
LYS
13
P
ARG
14
n
4
ARG
14
P
HIS
15
n
5
HIS
15
P
GLY
16
n
6
GLY
16
P
LEU
17
n
7
LEU
17
P
ASP
18
n
8
ASP
18
P
ASN
19
n
9
ASN
19
P
TYR
20
n
10
TYR
20
P
ARG
21
n
11
ARG
21
P
GLY
22
n
12
GLY
22
P
TYR
23
n
13
TYR
23
P
SER
24
n
14
SER
24
P
ILE
1
n
1
ILE
1
D
GLU
2
n
2
GLU
2
D
ALA
3
n
3
ALA
3
D
ASP
4
n
4
ASP
4
D
HIS
5
n
5
HIS
5
D
VAL
6
n
6
VAL
6
D
GLY
7
n
7
GLY
7
D
PHE
8
n
8
PHE
8
D
TYR
9
n
9
TYR
9
D
GLY
9
n
10
A
GLY
9
D
THR
10
n
11
THR
10
D
THR
11
n
12
THR
11
D
VAL
12
n
13
VAL
12
D
TYR
13
n
14
TYR
13
D
GLN
14
n
15
GLN
14
D
SER
15
n
16
SER
15
D
PRO
16
n
17
PRO
16
D
GLY
17
n
18
GLY
17
D
ASP
18
n
19
ASP
18
D
ILE
19
n
20
ILE
19
D
GLY
20
n
21
GLY
20
D
GLN
21
n
22
GLN
21
D
TYR
22
n
23
TYR
22
D
THR
23
n
24
THR
23
D
HIS
24
n
25
HIS
24
D
GLU
25
n
26
GLU
25
D
PHE
26
n
27
PHE
26
D
ASP
27
n
28
ASP
27
D
GLY
28
n
29
GLY
28
D
ASP
29
n
30
ASP
29
D
GLU
30
n
31
GLU
30
D
LEU
31
n
32
LEU
31
D
PHE
32
n
33
PHE
32
D
TYR
33
n
34
TYR
33
D
VAL
34
n
35
VAL
34
D
ASP
35
n
36
ASP
35
D
LEU
36
n
37
LEU
36
D
ASP
37
n
38
ASP
37
D
LYS
38
n
39
LYS
38
D
LYS
39
n
40
LYS
39
D
LYS
40
n
41
LYS
40
D
THR
41
n
42
THR
41
D
VAL
42
n
43
VAL
42
D
TRP
43
n
44
TRP
43
D
ARG
44
n
45
ARG
44
D
LEU
45
n
46
LEU
45
D
PRO
46
n
47
PRO
46
D
GLU
47
n
48
GLU
47
D
PHE
48
n
49
PHE
48
D
GLY
49
n
50
GLY
49
D
GLN
50
n
51
GLN
50
D
LEU
51
n
52
LEU
51
D
ILE
52
n
53
ILE
52
D
LEU
53
n
54
LEU
53
D
PHE
54
n
55
PHE
54
D
GLU
55
n
56
GLU
55
D
PRO
56
n
57
PRO
56
D
GLN
57
n
58
GLN
57
D
GLY
58
n
59
GLY
58
D
GLY
59
n
60
GLY
59
D
LEU
60
n
61
LEU
60
D
GLN
61
n
62
GLN
61
D
ASN
62
n
63
ASN
62
D
ILE
63
n
64
ILE
63
D
ALA
64
n
65
ALA
64
D
ALA
65
n
66
ALA
65
D
GLU
66
n
67
GLU
66
D
LYS
67
n
68
LYS
67
D
HIS
68
n
69
HIS
68
D
ASN
69
n
70
ASN
69
D
LEU
70
n
71
LEU
70
D
GLY
71
n
72
GLY
71
D
ILE
72
n
73
ILE
72
D
LEU
73
n
74
LEU
73
D
THR
74
n
75
THR
74
D
LYS
75
n
76
LYS
75
D
ARG
76
n
77
ARG
76
D
SER
77
n
78
SER
77
D
ASN
78
n
79
ASN
78
D
PHE
79
n
80
PHE
79
D
THR
80
n
81
THR
80
D
PRO
81
n
82
PRO
81
D
ALA
82
n
83
ALA
82
D
THR
83
n
84
THR
83
D
ASN
84
n
85
ASN
84
D
GLU
85
n
86
GLU
85
D
ALA
86
n
87
ALA
86
D
PRO
87
n
88
PRO
87
D
GLN
88
n
89
GLN
88
D
ALA
89
n
90
ALA
89
D
THR
90
n
91
THR
90
D
VAL
91
n
92
VAL
91
D
PHE
92
n
93
PHE
92
D
PRO
93
n
94
PRO
93
D
LYS
94
n
95
LYS
94
D
SER
95
n
96
SER
95
D
PRO
96
n
97
PRO
96
D
VAL
97
n
98
VAL
97
D
LEU
98
n
99
LEU
98
D
LEU
99
n
100
LEU
99
D
GLY
100
n
101
GLY
100
D
GLN
101
n
102
GLN
101
D
PRO
102
n
103
PRO
102
D
ASN
103
n
104
ASN
103
D
THR
104
n
105
THR
104
D
LEU
105
n
106
LEU
105
D
ILE
106
n
107
ILE
106
D
CYS
107
n
108
CYS
107
D
PHE
108
n
109
PHE
108
D
VAL
109
n
110
VAL
109
D
ASP
110
n
111
ASP
110
D
ASN
111
n
112
ASN
111
D
ILE
112
n
113
ILE
112
D
PHE
113
n
114
PHE
113
D
PRO
114
n
115
PRO
114
D
PRO
115
n
116
PRO
115
D
VAL
116
n
117
VAL
116
D
ILE
117
n
118
ILE
117
D
ASN
118
n
119
ASN
118
D
ILE
119
n
120
ILE
119
D
THR
120
n
121
THR
120
D
TRP
121
n
122
TRP
121
D
LEU
122
n
123
LEU
122
D
ARG
123
n
124
ARG
123
D
ASN
124
n
125
ASN
124
D
SER
125
n
126
SER
125
D
LYS
126
n
127
LYS
126
D
SER
127
n
128
SER
127
D
VAL
128
n
129
VAL
128
D
THR
129
n
130
THR
129
D
ASP
130
n
131
ASP
130
D
GLY
131
n
132
GLY
131
D
VAL
132
n
133
VAL
132
D
TYR
133
n
134
TYR
133
D
GLU
134
n
135
GLU
134
D
THR
135
n
136
THR
135
D
SER
136
n
137
SER
136
D
PHE
137
n
138
PHE
137
D
LEU
138
n
139
LEU
138
D
VAL
139
n
140
VAL
139
D
ASN
140
n
141
ASN
140
D
ARG
141
n
142
ARG
141
D
ASP
142
n
143
ASP
142
D
HIS
143
n
144
HIS
143
D
SER
144
n
145
SER
144
D
PHE
145
n
146
PHE
145
D
HIS
146
n
147
HIS
146
D
LYS
147
n
148
LYS
147
D
LEU
148
n
149
LEU
148
D
SER
149
n
150
SER
149
D
TYR
150
n
151
TYR
150
D
LEU
151
n
152
LEU
151
D
THR
152
n
153
THR
152
D
PHE
153
n
154
PHE
153
D
ILE
154
n
155
ILE
154
D
PRO
155
n
156
PRO
155
D
SER
156
n
157
SER
156
D
ASP
157
n
158
ASP
157
D
ASP
158
n
159
ASP
158
D
ASP
159
n
160
ASP
159
D
ILE
160
n
161
ILE
160
D
TYR
161
n
162
TYR
161
D
ASP
162
n
163
ASP
162
D
CYS
163
n
164
CYS
163
D
LYS
164
n
165
LYS
164
D
VAL
165
n
166
VAL
165
D
GLU
166
n
167
GLU
166
D
HIS
167
n
168
HIS
167
D
TRP
168
n
169
TRP
168
D
GLY
169
n
170
GLY
169
D
LEU
170
n
171
LEU
170
D
GLU
171
n
172
GLU
171
D
GLU
172
n
173
GLU
172
D
PRO
173
n
174
PRO
173
D
VAL
174
n
175
VAL
174
D
LEU
175
n
176
LEU
175
D
LYS
176
n
177
LYS
176
D
HIS
177
n
178
HIS
177
D
TRP
178
n
179
TRP
178
D
GLU
179
n
180
GLU
179
D
PRO
180
n
181
PRO
180
D
GLU
181
n
182
GLU
181
D
GLU
4
n
1
GLU
4
E
ARG
5
n
2
ARG
5
E
HIS
6
n
3
HIS
6
E
PHE
7
n
4
PHE
7
E
VAL
8
n
5
VAL
8
E
HIS
9
n
6
HIS
9
E
GLN
10
n
7
GLN
10
E
PHE
11
n
8
PHE
11
E
LYS
12
n
9
LYS
12
E
GLY
13
n
10
GLY
13
E
GLU
14
n
11
GLU
14
E
CYS
15
n
12
CYS
15
E
TYR
16
n
13
TYR
16
E
PHE
17
n
14
PHE
17
E
THR
18
n
15
THR
18
E
ASN
19
n
16
ASN
19
E
GLY
20
n
17
GLY
20
E
THR
21
n
18
THR
21
E
GLN
22
n
19
GLN
22
E
ARG
23
n
20
ARG
23
E
ILE
24
n
21
ILE
24
E
ARG
25
n
22
ARG
25
E
LEU
26
n
23
LEU
26
E
VAL
27
n
24
VAL
27
E
THR
28
n
25
THR
28
E
ARG
29
n
26
ARG
29
E
TYR
30
n
27
TYR
30
E
ILE
31
n
28
ILE
31
E
TYR
32
n
29
TYR
32
E
ASN
33
n
30
ASN
33
E
ARG
34
n
31
ARG
34
E
GLU
35
n
32
GLU
35
E
GLU
36
n
33
GLU
36
E
TYR
37
n
34
TYR
37
E
LEU
38
n
35
LEU
38
E
ARG
39
n
36
ARG
39
E
PHE
40
n
37
PHE
40
E
ASP
41
n
38
ASP
41
E
SER
42
n
39
SER
42
E
ASP
43
n
40
ASP
43
E
VAL
44
n
41
VAL
44
E
GLY
45
n
42
GLY
45
E
GLU
46
n
43
GLU
46
E
TYR
47
n
44
TYR
47
E
ARG
48
n
45
ARG
48
E
ALA
49
n
46
ALA
49
E
VAL
50
n
47
VAL
50
E
THR
51
n
48
THR
51
E
GLU
52
n
49
GLU
52
E
LEU
53
n
50
LEU
53
E
GLY
54
n
51
GLY
54
E
ARG
55
n
52
ARG
55
E
HIS
56
n
53
HIS
56
E
SER
57
n
54
SER
57
E
ALA
58
n
55
ALA
58
E
GLU
59
n
56
GLU
59
E
TYR
60
n
57
TYR
60
E
TYR
61
n
58
TYR
61
E
ASN
62
n
59
ASN
62
E
LYS
63
n
60
LYS
63
E
GLN
64
n
61
GLN
64
E
TYR
67
n
62
TYR
67
E
LEU
68
n
63
LEU
68
E
GLU
69
n
64
GLU
69
E
ARG
70
n
65
ARG
70
E
THR
71
n
66
THR
71
E
ARG
72
n
67
ARG
72
E
ALA
73
n
68
ALA
73
E
GLU
74
n
69
GLU
74
E
LEU
75
n
70
LEU
75
E
ASP
76
n
71
ASP
76
E
THR
77
n
72
THR
77
E
ALA
78
n
73
ALA
78
E
CYS
79
n
74
CYS
79
E
ARG
80
n
75
ARG
80
E
HIS
81
n
76
HIS
81
E
ASN
82
n
77
ASN
82
E
TYR
83
n
78
TYR
83
E
GLU
84
n
79
GLU
84
E
GLU
84
n
80
A
GLU
84
E
THR
85
n
81
THR
85
E
GLU
86
n
82
GLU
86
E
VAL
87
n
83
VAL
87
E
PRO
88
n
84
PRO
88
E
THR
89
n
85
THR
89
E
SER
90
n
86
SER
90
E
LEU
91
n
87
LEU
91
E
ARG
92
n
88
ARG
92
E
ARG
93
n
89
ARG
93
E
LEU
94
n
90
LEU
94
E
GLU
95
n
91
GLU
95
E
GLN
96
n
92
GLN
96
E
PRO
97
n
93
PRO
97
E
ASN
98
n
94
ASN
98
E
VAL
99
n
95
VAL
99
E
ALA
100
n
96
ALA
100
E
ILE
101
n
97
ILE
101
E
SER
102
n
98
SER
102
E
LEU
103
n
99
LEU
103
E
SER
104
n
100
SER
104
E
ARG
105
n
101
ARG
105
E
THR
106
n
102
THR
106
E
GLU
107
n
103
GLU
107
E
ALA
108
n
104
ALA
108
E
LEU
109
n
105
LEU
109
E
ASN
110
n
106
ASN
110
E
HIS
111
n
107
HIS
111
E
HIS
112
n
108
HIS
112
E
ASN
113
n
109
ASN
113
E
THR
114
n
110
THR
114
E
LEU
115
n
111
LEU
115
E
VAL
116
n
112
VAL
116
E
CYS
117
n
113
CYS
117
E
SER
118
n
114
SER
118
E
VAL
119
n
115
VAL
119
E
THR
120
n
116
THR
120
E
ASP
121
n
117
ASP
121
E
PHE
122
n
118
PHE
122
E
TYR
123
n
119
TYR
123
E
PRO
124
n
120
PRO
124
E
ALA
125
n
121
ALA
125
E
LYS
126
n
122
LYS
126
E
ILE
127
n
123
ILE
127
E
LYS
128
n
124
LYS
128
E
VAL
129
n
125
VAL
129
E
ARG
130
n
126
ARG
130
E
TRP
131
n
127
TRP
131
E
PHE
132
n
128
PHE
132
E
ARG
133
n
129
ARG
133
E
ASN
134
n
130
ASN
134
E
GLY
135
n
131
GLY
135
E
GLN
136
n
132
GLN
136
E
GLU
137
n
133
GLU
137
E
GLU
138
n
134
GLU
138
E
THR
139
n
135
THR
139
E
VAL
140
n
136
VAL
140
E
GLY
141
n
137
GLY
141
E
VAL
142
n
138
VAL
142
E
SER
143
n
139
SER
143
E
SER
144
n
140
SER
144
E
THR
145
n
141
THR
145
E
GLN
146
n
142
GLN
146
E
LEU
147
n
143
LEU
147
E
ILE
148
n
144
ILE
148
E
ARG
149
n
145
ARG
149
E
ASN
150
n
146
ASN
150
E
GLY
151
n
147
GLY
151
E
ASP
152
n
148
ASP
152
E
TRP
153
n
149
TRP
153
E
THR
154
n
150
THR
154
E
PHE
155
n
151
PHE
155
E
GLN
156
n
152
GLN
156
E
VAL
157
n
153
VAL
157
E
LEU
158
n
154
LEU
158
E
VAL
159
n
155
VAL
159
E
MET
160
n
156
MET
160
E
LEU
161
n
157
LEU
161
E
GLU
162
n
158
GLU
162
E
MET
163
n
159
MET
163
E
THR
164
n
160
THR
164
E
PRO
165
n
161
PRO
165
E
HIS
166
n
162
HIS
166
E
GLN
167
n
163
GLN
167
E
GLY
168
n
164
GLY
168
E
GLU
169
n
165
GLU
169
E
VAL
170
n
166
VAL
170
E
TYR
171
n
167
TYR
171
E
THR
172
n
168
THR
172
E
CYS
173
n
169
CYS
173
E
HIS
174
n
170
HIS
174
E
VAL
175
n
171
VAL
175
E
GLU
176
n
172
GLU
176
E
HIS
177
n
173
HIS
177
E
PRO
178
n
174
PRO
178
E
SER
179
n
175
SER
179
E
LEU
180
n
176
LEU
180
E
LYS
181
n
177
LYS
181
E
SER
182
n
178
SER
182
E
PRO
183
n
179
PRO
183
E
ILE
184
n
180
ILE
184
E
THR
185
n
181
THR
185
E
VAL
186
n
182
VAL
186
E
GLU
187
n
183
GLU
187
E
TRP
188
n
184
TRP
188
E
ARG
189
n
185
ARG
189
E
ALA
190
n
186
ALA
190
E
GLN
191
n
187
GLN
191
E
ALA
11
n
1
ALA
11
Q
MET
12
n
2
MET
12
Q
LYS
13
n
3
LYS
13
Q
ARG
14
n
4
ARG
14
Q
HIS
15
n
5
HIS
15
Q
GLY
16
n
6
GLY
16
Q
LEU
17
n
7
LEU
17
Q
ASP
18
n
8
ASP
18
Q
ASN
19
n
9
ASN
19
Q
TYR
20
n
10
TYR
20
Q
ARG
21
n
11
ARG
21
Q
GLY
22
n
12
GLY
22
Q
TYR
23
n
13
TYR
23
Q
SER
24
n
14
SER
24
Q
author_and_software_defined_assembly
PISA
6
hexameric
18090
-38
36750
D
ASN
78
GLYCOSYLATION SITE
D
ASN
79
ASN
D
ASN
118
GLYCOSYLATION SITE
D
ASN
119
ASN
B
ASN
19
GLYCOSYLATION SITE
B
ASN
16
ASN
A
ASN
78
GLYCOSYLATION SITE
A
ASN
79
ASN
A
ASN
118
GLYCOSYLATION SITE
A
ASN
119
ASN
E
ASN
19
GLYCOSYLATION SITE
E
ASN
16
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
42
A
O
VAL
43
A
N
TYR
33
A
N
TYR
34
A
N
VAL
34
A
N
VAL
35
A
O
TYR
22
A
O
TYR
23
A
O
GLU
25
A
O
GLU
26
A
N
PHE
8
A
N
PHE
8
A
N
SER
15
A
N
SER
16
B
O
PHE
7
B
O
PHE
4
B
N
TYR
16
B
N
TYR
13
B
O
ARG
25
B
O
ARG
22
B
O
TYR
32
B
O
TYR
29
B
N
GLU
35
B
N
GLU
32
B
O
ARG
39
B
O
ARG
36
B
N
ARG
48
B
N
ARG
45
A
N
PHE
92
A
N
PHE
93
A
O
ILE
106
A
O
ILE
107
A
N
ILE
112
A
N
ILE
113
A
O
PHE
145
A
O
PHE
146
A
O
HIS
146
A
O
HIS
147
A
N
LEU
138
A
N
LEU
139
A
O
TYR
133
A
O
TYR
134
A
N
TYR
150
A
N
TYR
151
A
N
LYS
126
A
N
LYS
127
A
O
ARG
123
A
O
ARG
124
A
O
LEU
122
A
O
LEU
123
A
N
ASP
162
A
N
ASP
163
A
N
VAL
165
A
N
VAL
166
A
O
VAL
174
A
O
VAL
175
B
O
SER
102
B
O
SER
98
B
N
VAL
116
B
N
VAL
112
B
O
PHE
122
B
O
PHE
118
B
N
PHE
155
B
N
PHE
151
B
N
MET
160
B
N
MET
156
B
O
SER
143
B
O
SER
139
B
O
SER
144
B
O
SER
140
E
N
SER
144
E
N
SER
140
E
N
THR
145
E
N
THR
141
E
O
LEU
158
E
O
LEU
154
E
N
MET
163
E
N
MET
159
E
O
ASN
113
E
O
ASN
109
E
N
THR
120
E
N
THR
116
E
O
ASN
98
E
O
ASN
94
B
O
ILE
148
B
O
ILE
144
B
N
GLN
156
B
N
GLN
152
E
O
ILE
148
E
O
ILE
144
E
N
GLN
156
E
N
GLN
152
B
O
GLN
136
B
O
GLN
132
B
N
ARG
133
B
N
ARG
129
B
O
PHE
132
B
O
PHE
128
B
N
THR
172
B
N
THR
168
B
N
VAL
175
B
N
VAL
171
B
O
ILE
184
B
O
ILE
180
D
O
VAL
42
D
O
VAL
43
D
N
TYR
33
D
N
TYR
34
D
N
VAL
34
D
N
VAL
35
D
O
TYR
22
D
O
TYR
23
D
O
GLU
25
D
O
GLU
26
D
N
PHE
8
D
N
PHE
8
D
O
SER
15
D
O
SER
16
E
N
PHE
7
E
N
PHE
4
E
N
TYR
16
E
N
TYR
13
E
O
ARG
25
E
O
ARG
22
E
N
TYR
32
E
N
TYR
29
E
O
GLU
35
E
O
GLU
32
E
N
ARG
39
E
N
ARG
36
E
O
ARG
48
E
O
ARG
45
D
O
PHE
92
D
O
PHE
93
D
N
ILE
106
D
N
ILE
107
D
N
ILE
112
D
N
ILE
113
D
O
PHE
145
D
O
PHE
146
D
N
TYR
150
D
N
TYR
151
D
O
TYR
133
D
O
TYR
134
D
N
LEU
138
D
N
LEU
139
D
O
HIS
146
D
O
HIS
147
D
N
VAL
128
D
N
VAL
129
D
O
TRP
121
D
O
TRP
122
D
O
LEU
122
D
O
LEU
123
D
N
ASP
162
D
N
ASP
163
D
N
VAL
165
D
N
VAL
166
D
O
VAL
174
D
O
VAL
175
1
D
HOH
1005
P
HOH
1
-15.78
2.50
113.10
97.32
D
D
D
N
CA
C
GLY
GLY
GLY
131
131
131
N
1
D
D
NH2
NH2
ARG
ARG
123
123
1.70
1_555
8_555
1
A
THR
10
-46.22
105.29
1
A
ASP
37
-86.14
-81.50
1
A
LYS
38
-53.41
-0.66
1
A
LYS
39
37.64
61.39
1
A
GLU
47
-37.13
-6.73
1
A
PHE
48
-74.76
-106.58
1
A
LEU
51
168.36
-66.11
1
A
HIS
68
-57.91
-75.08
1
A
PRO
96
-48.76
157.26
1
A
ASN
103
178.16
171.80
1
A
PHE
113
148.49
131.28
1
A
PRO
115
-57.95
54.69
1
A
ASN
124
39.35
58.06
1
A
SER
125
51.44
14.82
1
A
ASP
130
87.79
144.23
1
A
ASP
142
-82.83
42.32
1
A
SER
144
-103.47
-168.26
1
A
PHE
153
-161.11
-160.09
1
A
ASP
158
-84.04
-75.86
1
A
ASP
159
-7.12
142.66
1
A
PRO
173
-35.42
145.58
1
B
ASN
19
56.18
70.99
1
B
GLN
22
-80.00
38.11
1
B
ARG
23
164.99
94.82
1
B
ASN
33
59.58
-109.12
1
B
VAL
44
-65.93
-73.43
1
B
THR
51
-129.81
-153.56
1
B
LEU
53
-37.15
-24.45
1
B
LEU
68
-23.95
-64.70
1
B
GLU
69
-48.32
-76.76
1
B
CYS
79
-63.67
-77.09
1
B
HIS
81
-50.12
-75.01
1
B
THR
89
-124.50
-99.04
1
B
THR
106
-15.86
117.39
1
B
GLU
107
41.31
163.87
1
B
ASN
110
140.38
23.48
1
B
TYR
123
175.43
138.58
1
B
PRO
124
-64.16
-154.36
1
B
LEU
147
-22.54
129.77
1
B
VAL
157
174.77
139.99
1
B
HIS
166
-114.11
-133.61
1
B
ALA
190
-78.93
46.75
1
D
THR
10
-49.58
107.11
1
D
ASP
27
39.20
45.02
1
D
ASP
37
-82.42
-84.75
1
D
LYS
38
-53.60
-0.92
1
D
GLU
47
-43.68
-11.15
1
D
PHE
48
-68.36
-106.26
1
D
LEU
51
170.97
-66.71
1
D
HIS
68
-57.06
-76.15
1
D
ASN
78
70.03
60.33
1
D
PHE
79
35.05
45.54
1
D
PRO
102
-50.61
172.98
1
D
ASN
103
172.42
170.28
1
D
PHE
113
145.40
129.91
1
D
PRO
115
-57.99
52.05
1
D
SER
125
46.28
16.97
1
D
ASP
130
77.65
147.94
1
D
ASP
142
-75.90
41.96
1
D
HIS
143
39.45
34.63
1
D
SER
144
-103.64
-166.70
1
D
PHE
153
-156.48
-153.83
1
D
ASP
158
-84.43
-74.41
1
D
ASP
159
-10.35
134.25
1
D
PRO
173
-31.71
147.11
1
E
ASN
19
48.99
72.07
1
E
GLN
22
-74.11
33.54
1
E
ARG
23
169.11
100.06
1
E
ASN
33
61.50
-103.82
1
E
VAL
44
-61.34
-75.44
1
E
THR
51
-126.83
-156.33
1
E
ARG
55
-28.81
-64.12
1
E
ALA
58
-56.73
-72.44
1
E
GLU
59
-35.11
-36.69
1
E
LEU
68
-20.62
-59.87
1
E
GLU
69
-49.06
-71.84
1
E
ALA
78
-106.31
-65.16
1
E
HIS
81
-48.73
-76.99
1
E
TYR
83
-49.29
-71.02
1
E
THR
89
-126.60
-98.59
1
E
THR
106
-15.43
117.31
1
E
GLU
107
39.94
165.98
1
E
ASN
110
138.71
26.57
1
E
TYR
123
176.97
139.17
1
E
PRO
124
-62.18
-160.69
1
E
ARG
130
-170.10
137.77
1
E
SER
143
-175.31
146.40
1
E
LEU
147
-19.80
126.29
1
E
TRP
153
74.21
40.70
1
E
VAL
157
-176.93
142.88
1
E
HIS
166
-110.35
-136.57
1
E
ALA
190
-77.26
41.39
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
CARBOHYDRATE.PARAM
CARBOHYDRATE.TOP
36.4
4.07
0.00
0.00
4.07
0.00
-8.14
0.299
0.011
0.221
0.221
3.1
19.82
781
16107
4.8
80.2
RANDOM
285984.27
0.0
1
RESTRAINED
THROUGHOUT
3.0
MOLECULAR REPLACEMENT
PDB ENTRY 1IAK
0.53
0.37
5.00
0.90
0.51
3.1
19.82
72
6464
84
0
6308
0.010
1.5
25.1
0.86
1.39
1.50
2.51
2.00
1.43
2.00
2.46
2.50
0.363
0.034
0.285
3.29
112
2143
6
5.0
69.
39.1
3.1
20.
1F3J
18859
0
0.129
1
6.0
5.5
93.7
0.345
3.1
3.29
2.3
1
98.8
data reduction
DENZO
data scaling
SCALEPACK
data reduction
CCP4
data scaling
SCALA
phasing
AMoRE
refinement
CNS
data scaling
CCP4
(SCALA)
HISTOCOMPATIBILITY ANTIGEN I-AG7
1
N
N
2
N
N
3
N
N
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
A
PRO
56
A
PRO
57
HELX_P
A
SER
77
A
SER
78
1
1
22
B
GLY
54
B
GLY
51
HELX_P
B
TYR
67
B
TYR
62
1
2
12
B
TYR
67
B
TYR
62
HELX_P
B
ALA
78
B
ALA
73
1
3
12
B
ALA
78
B
ALA
73
HELX_P
B
GLU
86
B
GLU
82
1
4
10
D
PRO
56
D
PRO
57
HELX_P
D
SER
77
D
SER
78
1
5
22
E
GLY
54
E
GLY
51
HELX_P
E
TYR
67
E
TYR
62
1
6
12
E
TYR
67
E
TYR
62
HELX_P
E
ALA
78
E
ALA
73
1
7
12
E
ALA
78
E
ALA
73
HELX_P
E
THR
85
E
THR
81
1
8
9
E
THR
89
E
THR
85
HELX_P
E
ARG
93
E
ARG
89
5
9
5
disulf
2.027
A
CYS
107
A
SG
CYS
108
1_555
A
CYS
163
A
SG
CYS
164
1_555
disulf
2.044
B
CYS
15
B
SG
CYS
12
1_555
B
CYS
79
B
SG
CYS
74
1_555
disulf
2.022
B
CYS
117
B
SG
CYS
113
1_555
B
CYS
173
B
SG
CYS
169
1_555
disulf
2.028
D
CYS
107
D
SG
CYS
108
1_555
D
CYS
163
D
SG
CYS
164
1_555
disulf
2.037
E
CYS
15
E
SG
CYS
12
1_555
E
CYS
79
E
SG
CYS
74
1_555
disulf
2.019
E
CYS
117
E
SG
CYS
113
1_555
E
CYS
173
E
SG
CYS
169
1_555
covale
1.464
one
N-Glycosylation
A
ASN
78
A
ND2
ASN
79
1_555
A
NAG
1001
G
C1
NAG
1_555
covale
1.464
one
N-Glycosylation
A
ASN
118
A
ND2
ASN
119
1_555
A
NAG
1002
H
C1
NAG
1_555
covale
1.462
one
N-Glycosylation
B
ASN
19
B
ND2
ASN
16
1_555
B
NAG
1003
I
C1
NAG
1_555
covale
1.446
one
N-Glycosylation
D
ASN
78
D
ND2
ASN
79
1_555
D
NAG
1001
J
C1
NAG
1_555
covale
1.450
one
N-Glycosylation
D
ASN
118
D
ND2
ASN
119
1_555
D
NAG
1002
K
C1
NAG
1_555
covale
1.464
one
N-Glycosylation
E
ASN
19
E
ND2
ASN
16
1_555
E
NAG
1003
L
C1
NAG
1_555
IMMUNE SYSTEM
HISTOCOMPATIBILITY ANTIGEN, MHC, PEPTIDE COMPLEX, IMMUNE SYSTEM
A
SER
15
A
SER
16
1
A
PRO
16
A
PRO
17
1.67
A
PHE
113
A
PHE
114
1
A
PRO
114
A
PRO
115
-0.03
B
TYR
123
B
TYR
119
1
B
PRO
124
B
PRO
120
-0.29
D
SER
15
D
SER
16
1
D
PRO
16
D
PRO
17
0.37
D
PHE
113
D
PHE
114
1
D
PRO
114
D
PRO
115
0.29
E
TYR
123
E
TYR
119
1
E
PRO
124
E
PRO
120
-0.91
HA2D_MOUSE
UNP
1
27
P04228
Q31135_MOUSE
UNP
2
31
Q31135
LYSC_CHICK
UNP
3
29
P00698
27
208
1F3J
1
181
P04228
A
1
1
182
31
217
1F3J
4
191
Q31135
B
2
1
187
29
42
1F3J
11
24
P00698
P
3
1
14
27
208
1F3J
1
181
P04228
D
1
1
182
31
217
1F3J
4
191
Q31135
E
2
1
187
29
42
1F3J
11
24
P00698
Q
3
1
14
8
4
2
4
8
2
2
4
8
4
2
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
40
A
LYS
41
A
TRP
43
A
TRP
44
A
ASP
29
A
ASP
30
A
ASP
35
A
ASP
36
A
ILE
19
A
ILE
20
A
PHE
26
A
PHE
27
A
HIS
5
A
HIS
5
A
SER
15
A
SER
16
B
PHE
7
B
PHE
4
B
PHE
17
B
PHE
14
B
ILE
24
B
ILE
21
B
TYR
32
B
TYR
29
B
GLU
35
B
GLU
32
B
ASP
41
B
ASP
38
B
TYR
47
B
TYR
44
B
ALA
49
B
ALA
46
A
GLN
88
A
GLN
89
A
PRO
93
A
PRO
94
A
ASN
103
A
ASN
104
A
ILE
112
A
ILE
113
A
PHE
145
A
PHE
146
A
PHE
153
A
PHE
154
A
LEU
138
A
LEU
139
A
VAL
139
A
VAL
140
A
VAL
132
A
VAL
133
A
GLU
134
A
GLU
135
A
PHE
145
A
PHE
146
A
PHE
153
A
PHE
154
A
LYS
126
A
LYS
127
A
SER
127
A
SER
128
A
ASN
118
A
ASN
119
A
ARG
123
A
ARG
124
A
TYR
161
A
TYR
162
A
GLU
166
A
GLU
167
A
VAL
174
A
VAL
175
A
TRP
178
A
TRP
179
B
ILE
101
B
ILE
97
B
LEU
103
B
LEU
99
B
ASN
113
B
ASN
109
B
PHE
122
B
PHE
118
B
PHE
155
B
PHE
151
B
MET
163
B
MET
159
B
VAL
142
B
VAL
138
B
THR
145
B
THR
141
E
VAL
142
E
VAL
138
E
THR
145
E
THR
141
E
PHE
155
E
PHE
151
E
MET
163
E
MET
159
E
ASN
113
E
ASN
109
E
PHE
122
E
PHE
118
E
ASN
98
E
ASN
94
E
LEU
103
E
LEU
99
B
ILE
148
B
ILE
144
B
ARG
149
B
ARG
145
B
PHE
155
B
PHE
151
B
MET
163
B
MET
159
E
ILE
148
E
ILE
144
E
ARG
149
E
ARG
145
E
PHE
155
E
PHE
151
E
MET
163
E
MET
159
B
GLN
136
B
GLN
132
B
GLU
137
B
GLU
133
B
LYS
128
B
LYS
124
B
ARG
133
B
ARG
129
B
VAL
170
B
VAL
166
B
GLU
176
B
GLU
172
B
ILE
184
B
ILE
180
B
ARG
189
B
ARG
185
D
LYS
40
D
LYS
41
D
TRP
43
D
TRP
44
D
ASP
29
D
ASP
30
D
ASP
35
D
ASP
36
D
ILE
19
D
ILE
20
D
PHE
26
D
PHE
27
D
HIS
5
D
HIS
5
D
SER
15
D
SER
16
E
PHE
7
E
PHE
4
E
PHE
17
E
PHE
14
E
ILE
24
E
ILE
21
E
TYR
32
E
TYR
29
E
GLU
35
E
GLU
32
E
ASP
41
E
ASP
38
E
TYR
47
E
TYR
44
E
ALA
49
E
ALA
46
D
GLN
88
D
GLN
89
D
PRO
93
D
PRO
94
D
ASN
103
D
ASN
104
D
ILE
112
D
ILE
113
D
PHE
145
D
PHE
146
D
PHE
153
D
PHE
154
D
VAL
132
D
VAL
133
D
GLU
134
D
GLU
135
D
LEU
138
D
LEU
139
D
VAL
139
D
VAL
140
D
PHE
145
D
PHE
146
D
PHE
153
D
PHE
154
D
LYS
126
D
LYS
127
D
VAL
128
D
VAL
129
D
ASN
118
D
ASN
119
D
ARG
123
D
ARG
124
D
TYR
161
D
TYR
162
D
GLU
166
D
GLU
167
D
VAL
174
D
VAL
175
D
TRP
178
D
TRP
179
92
P 41 21 2