1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kleinjung, J.
Petit, M.-C.
Orlewski, P.
Mamalaki, A.
Tzartos, S.-J.
Tsikaris, V.
Sakarellos-Daitsiotis, M.
Sakarellos, C.
Marraud, M.
Cung, M.-T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H13 N O2
131.173
n
NORLEUCINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biopolymers
BIPMAA
0161
0006-3525
53
113
128
10.1002/(SICI)1097-0282(200002)53:2<113::AID-BIP1>3.3.CO;2-A
10679615
The third-dimensional structure of the complex between an Fv antibody fragment and an analogue of the main immunogenic region of the acetylcholine receptor: a combined two-dimensional NMR, homology, and molecular modeling approach.
2000
10.2210/pdb1f3r/pdb
pdb_00001f3r
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1091.175
ACETYLCHOLINE RECEPTOR ALPHA
MAIN IMMUNOGENIC REGION (91-100)
A70G, K76NLE
1
syn
polymer
27775.750
FV ANTIBODY FRAGMENT
FRAGMENT OF MAB198 RAISED AGAINST HUMAN ACETYLCHOLINE RECEPTOR
1
nat
polymer
no
yes
WNPGDYGGI(NLE)
WNPGDYGGIL
A
polypeptide(L)
no
no
QVQLLESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFL
KMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLS
CKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTK
LELKAAEQKLISEEDLN
QVQLLESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFL
KMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLS
CKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTK
LELKAAEQKLISEEDLN
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
MONOCLONAL ANTIBODY(MAB198) RAISED AGAINST HUMAN ACETYLCHOLINE RECEPTOR
Rattus
sample
10116
Rattus norvegicus
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2000-06-15
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2000-06-06
REL
REL
Sequence is derived from acetylcholine receptor of Torpedo electric organ
sample
This structure was determined using standard 2D homonuclear techniques.
all calculated structures submitted
1
1
2D NOESY
TOCSY
0.1 M
7.2
ambient
277
K
The peptide structure is based on 73
NOE-derived distance restraints.
The antibody structure is based on template structures
Pot IgM and Fab D1.3 antilysozyme.
The complex structure has been derived
by computational docking.
distance geometry
simulated annealing
docking
molecular dynamics
1
lowest energy
0.2 mM mAb198, 10 mM MIR peptide antigen,
0.1 M phosphate buffer
90% H2O/10% D2O
Bruker
processing
UXNMR
940501.3
Xia, Bartels
data analysis
XEASY
1.3
Guentert, Mumenthaler, Herrmann
structure solution
DYANA
1.2
MSI
refinement
DISCOVER3
97
400
Bruker
DRX
TRP
67
n
1
TRP
67
A
ASN
68
n
2
ASN
68
A
PRO
69
n
3
PRO
69
A
GLY
70
n
4
GLY
70
A
ASP
71
n
5
ASP
71
A
TYR
72
n
6
TYR
72
A
GLY
73
n
7
GLY
73
A
GLY
74
n
8
GLY
74
A
ILE
75
n
9
ILE
75
A
NLE
76
n
10
NLE
76
A
GLN
1
n
1
GLN
1
B
VAL
2
n
2
VAL
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
LEU
5
n
5
LEU
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
PRO
9
n
9
PRO
9
B
GLY
10
n
10
GLY
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
ARG
13
n
13
ARG
13
B
PRO
14
n
14
PRO
14
B
SER
15
n
15
SER
15
B
GLU
16
n
16
GLU
16
B
THR
17
n
17
THR
17
B
LEU
18
n
18
LEU
18
B
SER
19
n
19
SER
19
B
LEU
20
n
20
LEU
20
B
THR
21
n
21
THR
21
B
CYS
22
n
22
CYS
22
B
THR
23
n
23
THR
23
B
VAL
24
n
24
VAL
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
PHE
27
n
27
PHE
27
B
SER
28
n
28
SER
28
B
LEU
29
n
29
LEU
29
B
THR
30
n
30
THR
30
B
SER
31
n
31
SER
31
B
PHE
32
n
32
PHE
32
B
SER
33
n
33
SER
33
B
VAL
34
n
34
VAL
34
B
SER
35
n
35
SER
35
B
TRP
36
n
36
TRP
36
B
VAL
37
n
37
VAL
37
B
ARG
38
n
38
ARG
38
B
HIS
39
n
39
HIS
39
B
PRO
40
n
40
PRO
40
B
SER
41
n
41
SER
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
PRO
45
n
45
PRO
45
B
GLU
46
n
46
GLU
46
B
TRP
47
n
47
TRP
47
B
MET
48
n
48
MET
48
B
GLY
49
n
49
GLY
49
B
ARG
50
n
50
ARG
50
B
MET
51
n
51
MET
51
B
TRP
52
n
52
TRP
52
B
TYR
53
n
53
TYR
53
B
ASP
54
n
54
ASP
54
B
GLY
55
n
55
GLY
55
B
TYR
56
n
56
TYR
56
B
THR
57
n
57
THR
57
B
ALA
58
n
58
ALA
58
B
TYR
59
n
59
TYR
59
B
ASN
60
n
60
ASN
60
B
SER
61
n
61
SER
61
B
ALA
62
n
62
ALA
62
B
LEU
63
n
63
LEU
63
B
LYS
64
n
64
LYS
64
B
SER
65
n
65
SER
65
B
ARG
66
n
66
ARG
66
B
LEU
67
n
67
LEU
67
B
SER
68
n
68
SER
68
B
ILE
69
n
69
ILE
69
B
SER
70
n
70
SER
70
B
ARG
71
n
71
ARG
71
B
ASP
72
n
72
ASP
72
B
THR
73
n
73
THR
73
B
SER
74
n
74
SER
74
B
LYS
75
n
75
LYS
75
B
ASN
76
n
76
ASN
76
B
GLN
77
n
77
GLN
77
B
VAL
78
n
78
VAL
78
B
PHE
79
n
79
PHE
79
B
LEU
80
n
80
LEU
80
B
LYS
81
n
81
LYS
81
B
MET
82
n
82
MET
82
B
ASN
83
n
83
ASN
83
B
SER
84
n
84
SER
84
B
LEU
85
n
85
LEU
85
B
GLN
86
n
86
GLN
86
B
THR
87
n
87
THR
87
B
ASP
88
n
88
ASP
88
B
ASP
89
n
89
ASP
89
B
THR
90
n
90
THR
90
B
GLY
91
n
91
GLY
91
B
THR
92
n
92
THR
92
B
TYR
93
n
93
TYR
93
B
TYR
94
n
94
TYR
94
B
CYS
95
n
95
CYS
95
B
THR
96
n
96
THR
96
B
ARG
97
n
97
ARG
97
B
ASP
98
n
98
ASP
98
B
LEU
99
n
99
LEU
99
B
TYR
100
n
100
TYR
100
B
GLY
101
n
101
GLY
101
B
GLY
102
n
102
GLY
102
B
TYR
103
n
103
TYR
103
B
PRO
104
n
104
PRO
104
B
LEU
105
n
105
LEU
105
B
GLY
106
n
106
GLY
106
B
PHE
107
n
107
PHE
107
B
TRP
108
n
108
TRP
108
B
TYR
109
n
109
TYR
109
B
PHE
110
n
110
PHE
110
B
ASP
111
n
111
ASP
111
B
PHE
112
n
112
PHE
112
B
TRP
113
n
113
TRP
113
B
GLY
114
n
114
GLY
114
B
PRO
115
n
115
PRO
115
B
GLY
116
n
116
GLY
116
B
THR
117
n
117
THR
117
B
MET
118
n
118
MET
118
B
VAL
119
n
119
VAL
119
B
THR
120
n
120
THR
120
B
VAL
121
n
121
VAL
121
B
SER
122
n
122
SER
122
B
SER
123
n
123
SER
123
B
GLY
124
n
124
GLY
124
B
GLY
125
n
125
GLY
125
B
GLY
126
n
126
GLY
126
B
GLY
127
n
127
GLY
127
B
SER
128
n
128
SER
128
B
GLY
129
n
129
GLY
129
B
GLY
130
n
130
GLY
130
B
GLY
131
n
131
GLY
131
B
GLY
132
n
132
GLY
132
B
SER
133
n
133
SER
133
B
GLY
134
n
134
GLY
134
B
GLY
135
n
135
GLY
135
B
GLY
136
n
136
GLY
136
B
GLY
137
n
137
GLY
137
B
SER
138
n
138
SER
138
B
ASP
139
n
139
ASP
139
B
ILE
140
n
140
ILE
140
B
LYS
141
n
141
LYS
141
B
LEU
142
n
142
LEU
142
B
THR
143
n
143
THR
143
B
GLN
144
n
144
GLN
144
B
SER
145
n
145
SER
145
B
PRO
146
n
146
PRO
146
B
SER
147
n
147
SER
147
B
LEU
148
n
148
LEU
148
B
LEU
149
n
149
LEU
149
B
SER
150
n
150
SER
150
B
ALA
151
n
151
ALA
151
B
SER
152
n
152
SER
152
B
VAL
153
n
153
VAL
153
B
GLY
154
n
154
GLY
154
B
ASP
155
n
155
ASP
155
B
ARG
156
n
156
ARG
156
B
VAL
157
n
157
VAL
157
B
THR
158
n
158
THR
158
B
LEU
159
n
159
LEU
159
B
SER
160
n
160
SER
160
B
CYS
161
n
161
CYS
161
B
LYS
162
n
162
LYS
162
B
GLY
163
n
163
GLY
163
B
SER
164
n
164
SER
164
B
GLN
165
n
165
GLN
165
B
ASN
166
n
166
ASN
166
B
ILE
167
n
167
ILE
167
B
ASN
168
n
168
ASN
168
B
ASN
169
n
169
ASN
169
B
TYR
170
n
170
TYR
170
B
LEU
171
n
171
LEU
171
B
ALA
172
n
172
ALA
172
B
TRP
173
n
173
TRP
173
B
TYR
174
n
174
TYR
174
B
GLN
175
n
175
GLN
175
B
GLN
176
n
176
GLN
176
B
LYS
177
n
177
LYS
177
B
LEU
178
n
178
LEU
178
B
GLY
179
n
179
GLY
179
B
GLU
180
n
180
GLU
180
B
ALA
181
n
181
ALA
181
B
PRO
182
n
182
PRO
182
B
LYS
183
n
183
LYS
183
B
LEU
184
n
184
LEU
184
B
LEU
185
n
185
LEU
185
B
ILE
186
n
186
ILE
186
B
TYR
187
n
187
TYR
187
B
ASN
188
n
188
ASN
188
B
THR
189
n
189
THR
189
B
ASN
190
n
190
ASN
190
B
SER
191
n
191
SER
191
B
LEU
192
n
192
LEU
192
B
GLN
193
n
193
GLN
193
B
THR
194
n
194
THR
194
B
GLY
195
n
195
GLY
195
B
ILE
196
n
196
ILE
196
B
PRO
197
n
197
PRO
197
B
SER
198
n
198
SER
198
B
ARG
199
n
199
ARG
199
B
PHE
200
n
200
PHE
200
B
SER
201
n
201
SER
201
B
GLY
202
n
202
GLY
202
B
SER
203
n
203
SER
203
B
GLY
204
n
204
GLY
204
B
SER
205
n
205
SER
205
B
GLY
206
n
206
GLY
206
B
THR
207
n
207
THR
207
B
ASP
208
n
208
ASP
208
B
TYR
209
n
209
TYR
209
B
THR
210
n
210
THR
210
B
LEU
211
n
211
LEU
211
B
THR
212
n
212
THR
212
B
ILE
213
n
213
ILE
213
B
SER
214
n
214
SER
214
B
SER
215
n
215
SER
215
B
LEU
216
n
216
LEU
216
B
GLN
217
n
217
GLN
217
B
PRO
218
n
218
PRO
218
B
GLU
219
n
219
GLU
219
B
ASP
220
n
220
ASP
220
B
VAL
221
n
221
VAL
221
B
ALA
222
n
222
ALA
222
B
THR
223
n
223
THR
223
B
TYR
224
n
224
TYR
224
B
PHE
225
n
225
PHE
225
B
CYS
226
n
226
CYS
226
B
TYR
227
n
227
TYR
227
B
GLN
228
n
228
GLN
228
B
TYR
229
n
229
TYR
229
B
ASN
230
n
230
ASN
230
B
ASN
231
n
231
ASN
231
B
GLY
232
n
232
GLY
232
B
TYR
233
n
233
TYR
233
B
THR
234
n
234
THR
234
B
PHE
235
n
235
PHE
235
B
GLY
236
n
236
GLY
236
B
ALA
237
n
237
ALA
237
B
GLY
238
n
238
GLY
238
B
THR
239
n
239
THR
239
B
LYS
240
n
240
LYS
240
B
LEU
241
n
241
LEU
241
B
GLU
242
n
242
GLU
242
B
LEU
243
n
243
LEU
243
B
LYS
244
n
244
LYS
244
B
ALA
245
n
245
ALA
245
B
ALA
246
n
246
ALA
246
B
GLU
247
n
247
GLU
247
B
GLN
248
n
248
GLN
248
B
LYS
249
n
249
LYS
249
B
LEU
250
n
250
LEU
250
B
ILE
251
n
251
ILE
251
B
SER
252
n
252
SER
252
B
GLU
253
n
253
GLU
253
B
GLU
254
n
254
GLU
254
B
ASP
255
n
255
ASP
255
B
LEU
256
n
256
LEU
256
B
ASN
257
n
257
ASN
257
B
author_defined_assembly
2
dimeric
A
NLE
76
NORLEUCINE
A
NLE
10
LEU
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
B
N
SER
7
B
N
SER
7
B
O
THR
21
B
O
THR
21
B
N
CYS
22
B
N
CYS
22
B
O
VAL
78
B
O
VAL
78
B
N
LYS
81
B
N
LYS
81
B
O
SER
68
B
O
SER
68
B
O
ALA
58
B
O
ALA
58
B
N
ARG
50
B
N
ARG
50
B
O
GLY
49
B
O
GLY
49
B
N
TRP
36
B
N
TRP
36
B
O
HIS
39
B
O
HIS
39
B
N
THR
92
B
N
THR
92
B
O
ARG
97
B
O
ARG
97
B
N
ASP
111
B
N
ASP
111
B
O
ALA
58
B
O
ALA
58
B
N
ARG
50
B
N
ARG
50
B
O
GLY
49
B
O
GLY
49
B
N
TRP
36
B
N
TRP
36
B
O
HIS
39
B
O
HIS
39
B
N
THR
92
B
N
THR
92
B
O
TYR
93
B
O
TYR
93
B
N
THR
117
B
N
THR
117
B
O
THR
120
B
O
THR
120
B
N
VAL
12
B
N
VAL
12
B
O
ASP
139
B
O
ASP
139
B
N
ASP
255
B
N
ASP
255
B
O
SER
145
B
O
SER
145
B
N
SER
160
B
N
SER
160
B
N
CYS
161
B
N
CYS
161
B
O
TYR
209
B
O
TYR
209
B
N
THR
212
B
N
THR
212
B
O
SER
201
B
O
SER
201
B
N
LEU
149
B
N
LEU
149
B
O
LYS
240
B
O
LYS
240
B
O
SER
191
B
O
SER
191
B
N
TYR
187
B
N
TYR
187
B
N
LEU
185
B
N
LEU
185
B
O
TRP
173
B
O
TRP
173
B
N
GLN
176
B
N
GLN
176
B
O
THR
223
B
O
THR
223
B
N
GLN
228
B
N
GLN
228
B
O
THR
234
B
O
THR
234
1
B
TYR
59
0.074
SIDE CHAIN
1
B
TYR
100
0.074
SIDE CHAIN
1
-5.91
0.90
109.00
103.09
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
67
67
67
N
1
4.15
0.50
120.30
124.45
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
13
13
13
N
1
-3.05
0.50
120.30
117.25
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
13
13
13
N
1
4.19
0.50
120.30
124.49
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
8.52
1.30
111.50
120.02
B
B
B
ND1
CE1
NE2
HIS
HIS
HIS
39
39
39
N
1
3.41
0.50
120.30
123.71
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
50
50
50
N
1
6.20
0.90
118.30
124.50
B
B
B
CB
CG
OD1
ASP
ASP
ASP
54
54
54
N
1
-6.28
0.90
118.30
112.02
B
B
B
CB
CG
OD2
ASP
ASP
ASP
54
54
54
N
1
4.27
0.50
120.30
124.57
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
66
66
66
N
1
-3.13
0.50
120.30
117.17
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
66
66
66
N
1
4.40
0.50
120.30
124.70
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
71
71
71
N
1
6.61
0.90
118.30
124.91
B
B
B
CB
CG
OD1
ASP
ASP
ASP
72
72
72
N
1
-6.72
0.90
118.30
111.58
B
B
B
CB
CG
OD2
ASP
ASP
ASP
72
72
72
N
1
5.46
0.90
118.30
123.76
B
B
B
CB
CG
OD1
ASP
ASP
ASP
88
88
88
N
1
-5.81
0.90
118.30
112.49
B
B
B
CB
CG
OD2
ASP
ASP
ASP
88
88
88
N
1
4.38
0.50
120.30
124.68
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
97
97
97
N
1
-5.45
0.90
118.30
112.85
B
B
B
CB
CG
OD2
ASP
ASP
ASP
98
98
98
N
1
-4.80
0.60
121.00
116.20
B
B
B
CB
CG
CD2
TYR
TYR
TYR
100
100
100
N
1
5.80
0.90
118.30
124.10
B
B
B
CB
CG
OD1
ASP
ASP
ASP
139
139
139
N
1
-5.82
0.90
118.30
112.48
B
B
B
CB
CG
OD2
ASP
ASP
ASP
139
139
139
N
1
6.49
0.90
118.30
124.79
B
B
B
CB
CG
OD1
ASP
ASP
ASP
155
155
155
N
1
-6.37
0.90
118.30
111.93
B
B
B
CB
CG
OD2
ASP
ASP
ASP
155
155
155
N
1
4.06
0.50
120.30
124.36
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
156
156
156
N
1
4.15
0.50
120.30
124.45
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
199
199
199
N
1
-3.24
0.50
120.30
117.06
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
199
199
199
N
1
5.81
0.90
118.30
124.11
B
B
B
CB
CG
OD1
ASP
ASP
ASP
208
208
208
N
1
-6.08
0.90
118.30
112.22
B
B
B
CB
CG
OD2
ASP
ASP
ASP
208
208
208
N
1
6.17
0.90
118.30
124.47
B
B
B
CB
CG
OD1
ASP
ASP
ASP
220
220
220
N
1
-5.86
0.90
118.30
112.44
B
B
B
CB
CG
OD2
ASP
ASP
ASP
220
220
220
N
1
B
B
CD
OE2
GLU
GLU
6
6
0.107
0.011
1.252
1.359
N
1
B
B
CD
OE2
GLU
GLU
16
16
0.105
0.011
1.252
1.357
N
1
B
B
CG
CD2
HIS
HIS
39
39
0.057
0.009
1.354
1.411
N
1
B
B
CD
OE2
GLU
GLU
46
46
0.106
0.011
1.252
1.358
N
1
B
B
CD
OE2
GLU
GLU
180
180
0.109
0.011
1.252
1.361
N
1
B
B
CD
OE2
GLU
GLU
219
219
0.107
0.011
1.252
1.359
N
1
B
B
CD
OE2
GLU
GLU
242
242
0.109
0.011
1.252
1.361
N
1
B
B
CD
OE2
GLU
GLU
247
247
0.110
0.011
1.252
1.362
N
1
B
B
CD
OE2
GLU
GLU
253
253
0.108
0.011
1.252
1.360
N
1
B
B
CD
OE2
GLU
GLU
254
254
0.107
0.011
1.252
1.359
N
1
A
PRO
69
-54.07
100.15
1
B
SER
15
84.33
-40.32
1
B
GLU
16
-84.18
-136.17
1
B
SER
31
-68.15
-75.65
1
B
PHE
32
-103.90
79.76
1
B
SER
41
-68.89
90.44
1
B
LYS
43
-131.69
-70.72
1
B
LYS
64
-105.38
-79.10
1
B
SER
84
68.26
67.24
1
B
ASP
89
-83.39
36.20
1
B
TYR
109
88.70
-110.70
1
B
ASP
111
-115.73
-76.36
1
B
SER
122
-166.49
109.04
1
B
SER
138
-167.16
96.16
1
B
THR
143
-68.43
98.75
1
B
ASN
168
74.30
-81.10
1
B
ASN
169
-146.97
14.23
1
B
TYR
170
-109.45
79.97
1
B
THR
189
65.26
-74.69
1
B
THR
194
-56.00
105.34
1
B
ARG
199
-136.61
-47.66
1
B
SER
214
-75.54
-80.89
1
B
ASN
230
-148.56
-63.09
1
B
ASN
231
-86.39
-90.92
COMPLEX BETWEEN FV ANTIBODY FRAGMENT AND AN ANALOGUE OF THE MAIN IMMUNOGENIC REGION OF THE ACETYLCHOLINE RECEPTOR
1
N
N
2
N
N
B
GLN
217
B
GLN
217
HELX_P
B
VAL
221
B
VAL
221
5
1
5
disulf
2.954
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
95
B
SG
CYS
95
1_555
covale
1.345
both
A
ILE
75
A
C
ILE
9
1_555
A
NLE
76
A
N
NLE
10
1_555
IMMUNE SYSTEM
IG-FOLD, IMMUNO COMPLEX, ANTIBODY-ANTIGEN, BETA-TURN, IMMUNE SYSTEM
B
SER
145
B
SER
145
1
B
PRO
146
B
PRO
146
-0.89
223528
GB
1
223528
AAB27717
GB
2
404506
AAB27718
GB
2
404508
91
100
1F3R
67
76
223528
A
1
1
10
1
123
1F3R
1
123
404506
B
2
1
123
1
106
1F3R
139
244
404508
B
3
139
244
1
ALA
engineered mutation
GLY
70
1F3R
A
223528
GB
94
4
1
LYS
engineered mutation
NLE
76
1F3R
A
223528
GB
100
10
4
5
6
2
4
2
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
B
GLN
3
B
GLN
3
B
SER
7
B
SER
7
B
THR
17
B
THR
17
B
SER
25
B
SER
25
B
GLN
77
B
GLN
77
B
ASN
83
B
ASN
83
B
LEU
67
B
LEU
67
B
ASP
72
B
ASP
72
B
THR
57
B
THR
57
B
TYR
59
B
TYR
59
B
GLU
46
B
GLU
46
B
MET
51
B
MET
51
B
SER
35
B
SER
35
B
PRO
40
B
PRO
40
B
GLY
91
B
GLY
91
B
ASP
98
B
ASP
98
B
PHE
110
B
PHE
110
B
TRP
113
B
TRP
113
B
THR
57
B
THR
57
B
TYR
59
B
TYR
59
B
GLU
46
B
GLU
46
B
MET
51
B
MET
51
B
SER
35
B
SER
35
B
PRO
40
B
PRO
40
B
GLY
91
B
GLY
91
B
ASP
98
B
ASP
98
B
THR
117
B
THR
117
B
VAL
121
B
VAL
121
B
LEU
11
B
LEU
11
B
VAL
12
B
VAL
12
B
ASP
139
B
ASP
139
B
ILE
140
B
ILE
140
B
GLU
254
B
GLU
254
B
ASP
255
B
ASP
255
B
GLN
144
B
GLN
144
B
SER
145
B
SER
145
B
VAL
157
B
VAL
157
B
LYS
162
B
LYS
162
B
ASP
208
B
ASP
208
B
ILE
213
B
ILE
213
B
PHE
200
B
PHE
200
B
SER
205
B
SER
205
B
LEU
148
B
LEU
148
B
LEU
149
B
LEU
149
B
LYS
240
B
LYS
240
B
LEU
241
B
LEU
241
B
SER
191
B
SER
191
B
LEU
192
B
LEU
192
B
LYS
183
B
LYS
183
B
TYR
187
B
TYR
187
B
LEU
171
B
LEU
171
B
GLN
176
B
GLN
176
B
THR
223
B
THR
223
B
TYR
229
B
TYR
229
B
TYR
233
B
TYR
233
B
PHE
235
B
PHE
235
1
P 1