0.010803
0.006237
0.000000
0.000000
0.012474
0.000000
0.000000
0.000000
0.016096
0.00000
0.00000
0.00000
Pasternak, A.
White, A.
Cahoon, M.
Ringe, D.
Hedstrom, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.0
90.0
120.0
92.568
92.568
62.126
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Protein Sci.
PRCIEI
0795
0961-8368
10
1331
1342
10.1110/ps.44101
11420435
The energetic cost of induced fit catalysis: Crystal structures of trypsinogen mutants with enhanced activity and inhibitor affinity.
2001
US
Protein Sci.
PRCIEI
0795
0961-8368
8
253
258
Comparison of Anionic and Cationic Trypsinogens: the Anionic Activation Domain is More Flexible in Solution and Differs in its Mode of BPTI Binding in the Crystal Structure
1999
US
Biochemistry
BICHAW
0033
0006-2960
37
16201
16210
10.1021/bi980951d
Activating a Zymogen Without Proteolytic Processing: Mutation of Lys15 and Asn194 Activates Trypsinogen.
1998
10.2210/pdb1f5r/pdb
pdb_00001f5r
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277.
1
IMAGE PLATE
1998-12-09
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU300
24736.742
TRYPSIN II, ANIONIC
3.4.21.4
DELTA-I16-V17, Q156K
1
man
polymer
7337.477
PANCREATIC TRYPSIN INHIBITOR
1
nat
polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
270
nat
water
BPTI
no
no
EAFPVDDDDKGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIK
HPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLKCLDAPLLPQADCEASY
PGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN
EAFPVDDDDKGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIK
HPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLKCLDAPLLPQADCEASY
PGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN
A
polypeptide(L)
no
no
RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGPWENL
RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGPWENL
I
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
baker's yeast
Saccharomyces
sample
10116
Rattus norvegicus
4932
Saccharomyces cerevisiae
PLASMID
PYT
cattle
Bos
sample
9913
Bos taurus
PANCREAS
1
2.39
48.63
VAPOR DIFFUSION, HANGING DROP
6.5
22% PEG 3380, 300 mM Ammonium acetate, 100 mM Sodium acetate, , pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
298.0
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2001-07-04
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-06-15
REL
CA
CALCIUM ION
HOH
water
CA
800
3
CA
CA
800
A
WAT
501
4
HOH
HOH
501
A
WAT
502
4
HOH
HOH
502
A
WAT
504
4
HOH
HOH
504
A
WAT
506
4
HOH
HOH
506
A
WAT
507
4
HOH
HOH
507
A
WAT
508
4
HOH
HOH
508
A
WAT
509
4
HOH
HOH
509
A
WAT
510
4
HOH
HOH
510
A
WAT
511
4
HOH
HOH
511
A
WAT
512
4
HOH
HOH
512
A
WAT
513
4
HOH
HOH
513
A
WAT
515
4
HOH
HOH
515
A
WAT
516
4
HOH
HOH
516
A
WAT
517
4
HOH
HOH
517
A
WAT
518
4
HOH
HOH
518
A
WAT
519
4
HOH
HOH
519
A
WAT
520
4
HOH
HOH
520
A
WAT
521
4
HOH
HOH
521
A
WAT
523
4
HOH
HOH
523
A
WAT
524
4
HOH
HOH
524
A
WAT
525
4
HOH
HOH
525
A
WAT
526
4
HOH
HOH
526
A
WAT
527
4
HOH
HOH
527
A
WAT
528
4
HOH
HOH
528
A
WAT
529
4
HOH
HOH
529
A
WAT
530
4
HOH
HOH
530
A
WAT
531
4
HOH
HOH
531
A
WAT
532
4
HOH
HOH
532
A
WAT
533
4
HOH
HOH
533
A
WAT
534
4
HOH
HOH
534
A
WAT
535
4
HOH
HOH
535
A
WAT
536
4
HOH
HOH
536
A
WAT
538
4
HOH
HOH
538
A
WAT
539
4
HOH
HOH
539
A
WAT
541
4
HOH
HOH
541
A
WAT
542
4
HOH
HOH
542
A
WAT
543
4
HOH
HOH
543
A
WAT
544
4
HOH
HOH
544
A
WAT
545
4
HOH
HOH
545
A
WAT
546
4
HOH
HOH
546
A
WAT
547
4
HOH
HOH
547
A
WAT
549
4
HOH
HOH
549
A
WAT
550
4
HOH
HOH
550
A
WAT
551
4
HOH
HOH
551
A
WAT
552
4
HOH
HOH
552
A
WAT
553
4
HOH
HOH
553
A
WAT
554
4
HOH
HOH
554
A
WAT
555
4
HOH
HOH
555
A
WAT
556
4
HOH
HOH
556
A
WAT
557
4
HOH
HOH
557
A
WAT
558
4
HOH
HOH
558
A
WAT
559
4
HOH
HOH
559
A
WAT
560
4
HOH
HOH
560
A
WAT
561
4
HOH
HOH
561
A
WAT
562
4
HOH
HOH
562
A
WAT
563
4
HOH
HOH
563
A
WAT
564
4
HOH
HOH
564
A
WAT
565
4
HOH
HOH
565
A
WAT
566
4
HOH
HOH
566
A
WAT
567
4
HOH
HOH
567
A
WAT
569
4
HOH
HOH
569
A
WAT
570
4
HOH
HOH
570
A
WAT
571
4
HOH
HOH
571
A
WAT
572
4
HOH
HOH
572
A
WAT
573
4
HOH
HOH
573
A
WAT
574
4
HOH
HOH
574
A
WAT
575
4
HOH
HOH
575
A
WAT
576
4
HOH
HOH
576
A
WAT
577
4
HOH
HOH
577
A
WAT
579
4
HOH
HOH
579
A
WAT
580
4
HOH
HOH
580
A
WAT
581
4
HOH
HOH
581
A
WAT
582
4
HOH
HOH
582
A
WAT
583
4
HOH
HOH
583
A
WAT
584
4
HOH
HOH
584
A
WAT
585
4
HOH
HOH
585
A
WAT
586
4
HOH
HOH
586
A
WAT
587
4
HOH
HOH
587
A
WAT
588
4
HOH
HOH
588
A
WAT
590
4
HOH
HOH
590
A
WAT
591
4
HOH
HOH
591
A
WAT
592
4
HOH
HOH
592
A
WAT
593
4
HOH
HOH
593
A
WAT
596
4
HOH
HOH
596
A
WAT
597
4
HOH
HOH
597
A
WAT
598
4
HOH
HOH
598
A
WAT
599
4
HOH
HOH
599
A
WAT
600
4
HOH
HOH
600
A
WAT
601
4
HOH
HOH
601
A
WAT
603
4
HOH
HOH
603
A
WAT
604
4
HOH
HOH
604
A
WAT
605
4
HOH
HOH
605
A
WAT
606
4
HOH
HOH
606
A
WAT
607
4
HOH
HOH
607
A
WAT
608
4
HOH
HOH
608
A
WAT
609
4
HOH
HOH
609
A
WAT
610
4
HOH
HOH
610
A
WAT
611
4
HOH
HOH
611
A
WAT
612
4
HOH
HOH
612
A
WAT
613
4
HOH
HOH
613
A
WAT
614
4
HOH
HOH
614
A
WAT
615
4
HOH
HOH
615
A
WAT
616
4
HOH
HOH
616
A
WAT
617
4
HOH
HOH
617
A
WAT
618
4
HOH
HOH
618
A
WAT
619
4
HOH
HOH
619
A
WAT
620
4
HOH
HOH
620
A
WAT
621
4
HOH
HOH
621
A
WAT
623
4
HOH
HOH
623
A
WAT
625
4
HOH
HOH
625
A
WAT
628
4
HOH
HOH
628
A
WAT
629
4
HOH
HOH
629
A
WAT
631
4
HOH
HOH
631
A
WAT
632
4
HOH
HOH
632
A
WAT
633
4
HOH
HOH
633
A
WAT
634
4
HOH
HOH
634
A
WAT
635
4
HOH
HOH
635
A
WAT
637
4
HOH
HOH
637
A
WAT
638
4
HOH
HOH
638
A
WAT
640
4
HOH
HOH
640
A
WAT
642
4
HOH
HOH
642
A
WAT
644
4
HOH
HOH
644
A
WAT
645
4
HOH
HOH
645
A
WAT
646
4
HOH
HOH
646
A
WAT
647
4
HOH
HOH
647
A
WAT
648
4
HOH
HOH
648
A
WAT
650
4
HOH
HOH
650
A
WAT
651
4
HOH
HOH
651
A
WAT
652
4
HOH
HOH
652
A
WAT
654
4
HOH
HOH
654
A
WAT
655
4
HOH
HOH
655
A
WAT
656
4
HOH
HOH
656
A
WAT
658
4
HOH
HOH
658
A
WAT
660
4
HOH
HOH
660
A
WAT
661
4
HOH
HOH
661
A
WAT
662
4
HOH
HOH
662
A
WAT
664
4
HOH
HOH
664
A
WAT
665
4
HOH
HOH
665
A
WAT
666
4
HOH
HOH
666
A
WAT
667
4
HOH
HOH
667
A
WAT
668
4
HOH
HOH
668
A
WAT
670
4
HOH
HOH
670
A
WAT
671
4
HOH
HOH
671
A
WAT
672
4
HOH
HOH
672
A
WAT
674
4
HOH
HOH
674
A
WAT
675
4
HOH
HOH
675
A
WAT
676
4
HOH
HOH
676
A
WAT
677
4
HOH
HOH
677
A
WAT
678
4
HOH
HOH
678
A
WAT
679
4
HOH
HOH
679
A
WAT
680
4
HOH
HOH
680
A
WAT
681
4
HOH
HOH
681
A
WAT
682
4
HOH
HOH
682
A
WAT
683
4
HOH
HOH
683
A
WAT
684
4
HOH
HOH
684
A
WAT
685
4
HOH
HOH
685
A
WAT
686
4
HOH
HOH
686
A
WAT
687
4
HOH
HOH
687
A
WAT
689
4
HOH
HOH
689
A
WAT
693
4
HOH
HOH
693
A
WAT
695
4
HOH
HOH
695
A
WAT
696
4
HOH
HOH
696
A
WAT
697
4
HOH
HOH
697
A
WAT
698
4
HOH
HOH
698
A
WAT
699
4
HOH
HOH
699
A
WAT
701
4
HOH
HOH
701
A
WAT
702
4
HOH
HOH
702
A
WAT
703
4
HOH
HOH
703
A
WAT
706
4
HOH
HOH
706
A
WAT
707
4
HOH
HOH
707
A
WAT
708
4
HOH
HOH
708
A
WAT
711
4
HOH
HOH
711
A
WAT
712
4
HOH
HOH
712
A
WAT
713
4
HOH
HOH
713
A
WAT
715
4
HOH
HOH
715
A
WAT
716
4
HOH
HOH
716
A
WAT
717
4
HOH
HOH
717
A
WAT
718
4
HOH
HOH
718
A
WAT
719
4
HOH
HOH
719
A
WAT
720
4
HOH
HOH
720
A
WAT
721
4
HOH
HOH
721
A
WAT
723
4
HOH
HOH
723
A
WAT
724
4
HOH
HOH
724
A
WAT
725
4
HOH
HOH
725
A
WAT
728
4
HOH
HOH
728
A
WAT
729
4
HOH
HOH
729
A
WAT
730
4
HOH
HOH
730
A
WAT
731
4
HOH
HOH
731
A
WAT
732
4
HOH
HOH
732
A
WAT
733
4
HOH
HOH
733
A
WAT
736
4
HOH
HOH
736
A
WAT
737
4
HOH
HOH
737
A
WAT
739
4
HOH
HOH
739
A
WAT
741
4
HOH
HOH
741
A
WAT
742
4
HOH
HOH
742
A
WAT
743
4
HOH
HOH
743
A
WAT
744
4
HOH
HOH
744
A
WAT
745
4
HOH
HOH
745
A
WAT
746
4
HOH
HOH
746
A
WAT
748
4
HOH
HOH
748
A
WAT
749
4
HOH
HOH
749
A
WAT
750
4
HOH
HOH
750
A
WAT
751
4
HOH
HOH
751
A
WAT
752
4
HOH
HOH
752
A
WAT
754
4
HOH
HOH
754
A
WAT
755
4
HOH
HOH
755
A
WAT
756
4
HOH
HOH
756
A
WAT
759
4
HOH
HOH
759
A
WAT
761
4
HOH
HOH
761
A
WAT
762
4
HOH
HOH
762
A
WAT
764
4
HOH
HOH
764
A
WAT
765
4
HOH
HOH
765
A
WAT
767
4
HOH
HOH
767
A
WAT
770
4
HOH
HOH
770
A
WAT
503
4
HOH
HOH
503
I
WAT
505
4
HOH
HOH
505
I
WAT
514
4
HOH
HOH
514
I
WAT
522
4
HOH
HOH
522
I
WAT
537
4
HOH
HOH
537
I
WAT
540
4
HOH
HOH
540
I
WAT
548
4
HOH
HOH
548
I
WAT
568
4
HOH
HOH
568
I
WAT
578
4
HOH
HOH
578
I
WAT
589
4
HOH
HOH
589
I
WAT
594
4
HOH
HOH
594
I
WAT
595
4
HOH
HOH
595
I
WAT
602
4
HOH
HOH
602
I
WAT
622
4
HOH
HOH
622
I
WAT
624
4
HOH
HOH
624
I
WAT
626
4
HOH
HOH
626
I
WAT
627
4
HOH
HOH
627
I
WAT
630
4
HOH
HOH
630
I
WAT
636
4
HOH
HOH
636
I
WAT
639
4
HOH
HOH
639
I
WAT
641
4
HOH
HOH
641
I
WAT
643
4
HOH
HOH
643
I
WAT
649
4
HOH
HOH
649
I
WAT
653
4
HOH
HOH
653
I
WAT
657
4
HOH
HOH
657
I
WAT
659
4
HOH
HOH
659
I
WAT
663
4
HOH
HOH
663
I
WAT
669
4
HOH
HOH
669
I
WAT
673
4
HOH
HOH
673
I
WAT
688
4
HOH
HOH
688
I
WAT
690
4
HOH
HOH
690
I
WAT
691
4
HOH
HOH
691
I
WAT
692
4
HOH
HOH
692
I
WAT
694
4
HOH
HOH
694
I
WAT
700
4
HOH
HOH
700
I
WAT
704
4
HOH
HOH
704
I
WAT
705
4
HOH
HOH
705
I
WAT
709
4
HOH
HOH
709
I
WAT
710
4
HOH
HOH
710
I
WAT
714
4
HOH
HOH
714
I
WAT
722
4
HOH
HOH
722
I
WAT
726
4
HOH
HOH
726
I
WAT
727
4
HOH
HOH
727
I
WAT
734
4
HOH
HOH
734
I
WAT
735
4
HOH
HOH
735
I
WAT
738
4
HOH
HOH
738
I
WAT
740
4
HOH
HOH
740
I
WAT
747
4
HOH
HOH
747
I
WAT
753
4
HOH
HOH
753
I
WAT
757
4
HOH
HOH
757
I
WAT
758
4
HOH
HOH
758
I
WAT
760
4
HOH
HOH
760
I
WAT
763
4
HOH
HOH
763
I
WAT
766
4
HOH
HOH
766
I
WAT
768
4
HOH
HOH
768
I
WAT
769
4
HOH
HOH
769
I
n
1
6
A
n
2
7
A
n
3
8
A
n
4
9
A
n
5
10
A
n
6
11
A
n
7
12
A
n
8
13
A
ASP
14
n
9
ASP
14
A
LYS
15
n
10
LYS
15
A
GLY
18
n
11
GLY
18
A
GLY
19
n
12
GLY
19
A
TYR
20
n
13
TYR
20
A
THR
21
n
14
THR
21
A
CYS
22
n
15
CYS
22
A
GLN
23
n
16
GLN
23
A
GLU
24
n
17
GLU
24
A
ASN
25
n
18
ASN
25
A
SER
26
n
19
SER
26
A
VAL
27
n
20
VAL
27
A
PRO
28
n
21
PRO
28
A
TYR
29
n
22
TYR
29
A
GLN
30
n
23
GLN
30
A
VAL
31
n
24
VAL
31
A
SER
32
n
25
SER
32
A
LEU
33
n
26
LEU
33
A
ASN
34
n
27
ASN
34
A
SER
37
n
28
SER
37
A
GLY
38
n
29
GLY
38
A
TYR
39
n
30
TYR
39
A
HIS
40
n
31
HIS
40
A
PHE
41
n
32
PHE
41
A
CYS
42
n
33
CYS
42
A
GLY
43
n
34
GLY
43
A
GLY
44
n
35
GLY
44
A
SER
45
n
36
SER
45
A
LEU
46
n
37
LEU
46
A
ILE
47
n
38
ILE
47
A
ASN
48
n
39
ASN
48
A
ASP
49
n
40
ASP
49
A
GLN
50
n
41
GLN
50
A
TRP
51
n
42
TRP
51
A
VAL
52
n
43
VAL
52
A
VAL
53
n
44
VAL
53
A
SER
54
n
45
SER
54
A
ALA
55
n
46
ALA
55
A
ALA
56
n
47
ALA
56
A
HIS
57
n
48
HIS
57
A
CYS
58
n
49
CYS
58
A
TYR
59
n
50
TYR
59
A
LYS
60
n
51
LYS
60
A
SER
61
n
52
SER
61
A
ARG
62
n
53
ARG
62
A
ILE
63
n
54
ILE
63
A
GLN
64
n
55
GLN
64
A
VAL
66
n
56
VAL
66
A
ARG
67
n
57
ARG
67
A
LEU
68
n
58
LEU
68
A
GLY
69
n
59
GLY
69
A
GLU
70
n
60
GLU
70
A
HIS
71
n
61
HIS
71
A
ASN
72
n
62
ASN
72
A
ILE
73
n
63
ILE
73
A
ASN
74
n
64
ASN
74
A
VAL
75
n
65
VAL
75
A
LEU
76
n
66
LEU
76
A
GLU
77
n
67
GLU
77
A
GLY
78
n
68
GLY
78
A
ASN
79
n
69
ASN
79
A
GLU
80
n
70
GLU
80
A
GLN
81
n
71
GLN
81
A
PHE
82
n
72
PHE
82
A
VAL
83
n
73
VAL
83
A
ASN
84
n
74
ASN
84
A
ALA
85
n
75
ALA
85
A
ALA
86
n
76
ALA
86
A
LYS
87
n
77
LYS
87
A
ILE
88
n
78
ILE
88
A
ILE
89
n
79
ILE
89
A
LYS
90
n
80
LYS
90
A
HIS
91
n
81
HIS
91
A
PRO
92
n
82
PRO
92
A
ASN
93
n
83
ASN
93
A
PHE
94
n
84
PHE
94
A
ASP
95
n
85
ASP
95
A
ARG
96
n
86
ARG
96
A
LYS
97
n
87
LYS
97
A
THR
98
n
88
THR
98
A
LEU
99
n
89
LEU
99
A
ASN
100
n
90
ASN
100
A
ASN
101
n
91
ASN
101
A
ASP
102
n
92
ASP
102
A
ILE
103
n
93
ILE
103
A
MET
104
n
94
MET
104
A
LEU
105
n
95
LEU
105
A
ILE
106
n
96
ILE
106
A
LYS
107
n
97
LYS
107
A
LEU
108
n
98
LEU
108
A
SER
109
n
99
SER
109
A
SER
110
n
100
SER
110
A
PRO
111
n
101
PRO
111
A
VAL
112
n
102
VAL
112
A
LYS
113
n
103
LYS
113
A
LEU
114
n
104
LEU
114
A
ASN
115
n
105
ASN
115
A
ALA
116
n
106
ALA
116
A
ARG
117
n
107
ARG
117
A
VAL
118
n
108
VAL
118
A
ALA
119
n
109
ALA
119
A
THR
120
n
110
THR
120
A
VAL
121
n
111
VAL
121
A
ALA
122
n
112
ALA
122
A
LEU
123
n
113
LEU
123
A
PRO
124
n
114
PRO
124
A
SER
125
n
115
SER
125
A
SER
127
n
116
SER
127
A
CYS
128
n
117
CYS
128
A
ALA
129
n
118
ALA
129
A
PRO
130
n
119
PRO
130
A
ALA
132
n
120
ALA
132
A
GLY
133
n
121
GLY
133
A
THR
134
n
122
THR
134
A
GLN
135
n
123
GLN
135
A
CYS
136
n
124
CYS
136
A
LEU
137
n
125
LEU
137
A
ILE
138
n
126
ILE
138
A
SER
139
n
127
SER
139
A
GLY
140
n
128
GLY
140
A
TRP
141
n
129
TRP
141
A
GLY
142
n
130
GLY
142
A
ASN
143
n
131
ASN
143
A
n
132
144
A
n
133
145
A
n
134
146
A
n
135
147
A
n
136
148
A
n
137
149
A
n
138
150
A
GLU
151
n
139
GLU
151
A
PRO
152
n
140
PRO
152
A
ASP
153
n
141
ASP
153
A
LEU
154
n
142
LEU
154
A
LEU
155
n
143
LEU
155
A
LYS
156
n
144
LYS
156
A
CYS
157
n
145
CYS
157
A
LEU
158
n
146
LEU
158
A
ASP
159
n
147
ASP
159
A
ALA
160
n
148
ALA
160
A
PRO
161
n
149
PRO
161
A
LEU
162
n
150
LEU
162
A
LEU
163
n
151
LEU
163
A
PRO
164
n
152
PRO
164
A
GLN
165
n
153
GLN
165
A
ALA
166
n
154
ALA
166
A
ASP
167
n
155
ASP
167
A
CYS
168
n
156
CYS
168
A
GLU
169
n
157
GLU
169
A
ALA
170
n
158
ALA
170
A
SER
171
n
159
SER
171
A
TYR
172
n
160
TYR
172
A
PRO
173
n
161
PRO
173
A
GLY
174
n
162
GLY
174
A
LYS
175
n
163
LYS
175
A
ILE
176
n
164
ILE
176
A
THR
177
n
165
THR
177
A
ASP
178
n
166
ASP
178
A
ASN
179
n
167
ASN
179
A
MET
180
n
168
MET
180
A
VAL
181
n
169
VAL
181
A
CYS
182
n
170
CYS
182
A
VAL
183
n
171
VAL
183
A
GLY
184
n
172
GLY
184
A
PHE
184
n
173
A
PHE
184
A
LEU
185
n
174
LEU
185
A
GLU
186
n
175
GLU
186
A
GLY
187
n
176
GLY
187
A
GLY
188
n
177
GLY
188
A
LYS
188
n
178
A
LYS
188
A
ASP
189
n
179
ASP
189
A
SER
190
n
180
SER
190
A
CYS
191
n
181
CYS
191
A
GLN
192
n
182
GLN
192
A
GLY
193
n
183
GLY
193
A
ASP
194
n
184
ASP
194
A
SER
195
n
185
SER
195
A
GLY
196
n
186
GLY
196
A
GLY
197
n
187
GLY
197
A
PRO
198
n
188
PRO
198
A
VAL
199
n
189
VAL
199
A
VAL
200
n
190
VAL
200
A
CYS
201
n
191
CYS
201
A
ASN
202
n
192
ASN
202
A
GLY
203
n
193
GLY
203
A
GLU
204
n
194
GLU
204
A
LEU
209
n
195
LEU
209
A
GLN
210
n
196
GLN
210
A
GLY
211
n
197
GLY
211
A
ILE
212
n
198
ILE
212
A
VAL
213
n
199
VAL
213
A
SER
214
n
200
SER
214
A
TRP
215
n
201
TRP
215
A
GLY
216
n
202
GLY
216
A
TYR
217
n
203
TYR
217
A
GLY
219
n
204
GLY
219
A
CYS
220
n
205
CYS
220
A
ALA
221
n
206
ALA
221
A
LEU
221
n
207
A
LEU
221
A
PRO
222
n
208
PRO
222
A
ASP
223
n
209
ASP
223
A
ASN
224
n
210
ASN
224
A
PRO
225
n
211
PRO
225
A
GLY
226
n
212
GLY
226
A
VAL
227
n
213
VAL
227
A
TYR
228
n
214
TYR
228
A
THR
229
n
215
THR
229
A
LYS
230
n
216
LYS
230
A
VAL
231
n
217
VAL
231
A
CYS
232
n
218
CYS
232
A
ASN
233
n
219
ASN
233
A
TYR
234
n
220
TYR
234
A
VAL
235
n
221
VAL
235
A
ASP
236
n
222
ASP
236
A
TRP
237
n
223
TRP
237
A
ILE
238
n
224
ILE
238
A
GLN
239
n
225
GLN
239
A
ASP
240
n
226
ASP
240
A
THR
241
n
227
THR
241
A
ILE
242
n
228
ILE
242
A
ALA
243
n
229
ALA
243
A
ALA
244
n
230
ALA
244
A
ASN
245
n
231
ASN
245
A
ARG
1
n
1
ARG
1
I
PRO
2
n
2
PRO
2
I
ASP
3
n
3
ASP
3
I
PHE
4
n
4
PHE
4
I
CYS
5
n
5
CYS
5
I
LEU
6
n
6
LEU
6
I
GLU
7
n
7
GLU
7
I
PRO
8
n
8
PRO
8
I
PRO
9
n
9
PRO
9
I
TYR
10
n
10
TYR
10
I
THR
11
n
11
THR
11
I
GLY
12
n
12
GLY
12
I
PRO
13
n
13
PRO
13
I
CYS
14
n
14
CYS
14
I
LYS
15
n
15
LYS
15
I
ALA
16
n
16
ALA
16
I
ARG
17
n
17
ARG
17
I
ILE
18
n
18
ILE
18
I
ILE
19
n
19
ILE
19
I
ARG
20
n
20
ARG
20
I
TYR
21
n
21
TYR
21
I
PHE
22
n
22
PHE
22
I
TYR
23
n
23
TYR
23
I
ASN
24
n
24
ASN
24
I
ALA
25
n
25
ALA
25
I
LYS
26
n
26
LYS
26
I
ALA
27
n
27
ALA
27
I
GLY
28
n
28
GLY
28
I
LEU
29
n
29
LEU
29
I
CYS
30
n
30
CYS
30
I
GLN
31
n
31
GLN
31
I
THR
32
n
32
THR
32
I
PHE
33
n
33
PHE
33
I
VAL
34
n
34
VAL
34
I
TYR
35
n
35
TYR
35
I
GLY
36
n
36
GLY
36
I
GLY
37
n
37
GLY
37
I
CYS
38
n
38
CYS
38
I
ARG
39
n
39
ARG
39
I
ALA
40
n
40
ALA
40
I
LYS
41
n
41
LYS
41
I
ARG
42
n
42
ARG
42
I
ASN
43
n
43
ASN
43
I
ASN
44
n
44
ASN
44
I
PHE
45
n
45
PHE
45
I
LYS
46
n
46
LYS
46
I
SER
47
n
47
SER
47
I
ALA
48
n
48
ALA
48
I
GLU
49
n
49
GLU
49
I
ASP
50
n
50
ASP
50
I
CYS
51
n
51
CYS
51
I
MET
52
n
52
MET
52
I
ARG
53
n
53
ARG
53
I
THR
54
n
54
THR
54
I
CYS
55
n
55
CYS
55
I
GLY
56
n
56
GLY
56
I
GLY
57
n
57
GLY
57
I
n
58
58
I
n
59
59
I
n
60
60
I
n
61
61
I
n
62
62
I
n
63
63
I
n
64
64
I
n
65
65
I
author_and_software_defined_assembly
PISA
2
dimeric
1460
-20
11910
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
A
ASN
72
A
O
ASN
62
1_555
93.9
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
A
VAL
75
A
O
VAL
65
1_555
146.8
A
ASN
72
A
O
ASN
62
1_555
A
CA
800
C
CA
CA
1_555
A
VAL
75
A
O
VAL
65
1_555
83.9
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
77
A
OE1
GLU
67
1_555
98.2
A
ASN
72
A
O
ASN
62
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
77
A
OE1
GLU
67
1_555
91.7
A
VAL
75
A
O
VAL
65
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
77
A
OE1
GLU
67
1_555
114.9
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
70
1_555
100.7
A
ASN
72
A
O
ASN
62
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
70
1_555
165.3
A
VAL
75
A
O
VAL
65
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
70
1_555
82.9
A
GLU
77
A
OE1
GLU
67
1_555
A
CA
800
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
70
1_555
87.9
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
A
HOH
535
D
O
HOH
1_555
75.0
A
ASN
72
A
O
ASN
62
1_555
A
CA
800
C
CA
CA
1_555
A
HOH
535
D
O
HOH
1_555
116.2
A
VAL
75
A
O
VAL
65
1_555
A
CA
800
C
CA
CA
1_555
A
HOH
535
D
O
HOH
1_555
76.4
A
GLU
77
A
OE1
GLU
67
1_555
A
CA
800
C
CA
CA
1_555
A
HOH
535
D
O
HOH
1_555
151.4
A
GLU
80
A
OE2
GLU
70
1_555
A
CA
800
C
CA
CA
1_555
A
HOH
535
D
O
HOH
1_555
66.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
20
A
O
TYR
13
A
N
CYS
157
A
N
CYS
145
A
O
ALA
160
A
O
ALA
148
A
N
CYS
136
A
N
CYS
124
A
N
SER
139
A
N
SER
127
A
O
PRO
198
A
O
PRO
188
A
N
CYS
201
A
N
CYS
191
A
O
GLU
204
A
O
GLU
194
A
O
TRP
215
A
O
TRP
201
A
N
VAL
227
A
N
VAL
213
A
N
TYR
228
A
N
TYR
214
A
O
VAL
181
A
O
VAL
169
A
O
LEU
33
A
O
LEU
26
A
N
PHE
41
A
N
PHE
32
A
N
ILE
47
A
N
ILE
38
A
O
TRP
51
A
O
TRP
42
A
N
SER
54
A
N
SER
45
A
O
MET
104
A
O
MET
94
A
O
LYS
107
A
O
LYS
97
A
N
ALA
86
A
N
ALA
76
A
O
VAL
83
A
O
VAL
73
A
N
VAL
66
A
N
VAL
56
A
N
ARG
67
A
N
ARG
57
A
O
SER
32
A
O
SER
25
I
N
ASN
24
B
N
ASN
24
I
O
LEU
29
B
O
LEU
29
1
A
GLU
6
A
GLU
1
1
Y
1
A
ALA
7
A
ALA
2
1
Y
1
A
PHE
8
A
PHE
3
1
Y
1
A
PRO
9
A
PRO
4
1
Y
1
A
VAL
10
A
VAL
5
1
Y
1
A
ASP
11
A
ASP
6
1
Y
1
A
ASP
12
A
ASP
7
1
Y
1
A
ASP
13
A
ASP
8
1
Y
1
A
THR
144
A
THR
132
1
Y
1
A
LEU
145
A
LEU
133
1
Y
1
A
SER
146
A
SER
134
1
Y
1
A
SER
147
A
SER
135
1
Y
1
A
GLY
148
A
GLY
136
1
Y
1
A
VAL
149
A
VAL
137
1
Y
1
A
ASN
150
A
ASN
138
1
Y
1
I
ALA
58
B
ALA
58
1
Y
1
I
ILE
59
B
ILE
59
1
Y
1
I
GLY
60
B
GLY
60
1
Y
1
I
PRO
61
B
PRO
61
1
Y
1
I
TRP
62
B
TRP
62
1
Y
1
I
GLU
63
B
GLU
63
1
Y
1
I
ASN
64
B
ASN
64
1
Y
1
I
LEU
65
B
LEU
65
1
Y
1
A
ASP
49
-56.27
0.95
1
A
HIS
71
-136.96
-66.10
1
A
ASP
153
A
-139.80
-71.63
1
A
ASP
153
B
-123.78
-86.72
1
A
SER
214
-123.51
-69.71
protein_rep.param
protein.top
ion.param
ion.top
water.param
water.top
21.8
0.26
-0.93
0
0.26
0
-0.52
0.22
0.004
0.189
1.65
21.69
3489
31408
34897
10.0
93.6
RANDOM
1
THROUGHOUT
0
0
Engh & Huber
FLAT MODEL
48.0572
0.340608
0.22
0.19
5.00
0.17
0.17
1.65
21.69
270
2372
1
0
2101
1.3
0.005
25.3
0.78
0.58
1.50
1.04
2.00
0.72
2.00
1.15
2.50
0.315
0.014
0.313
1.75
505
4328
6
10.4
78.9
18.2
1.65
21.69
1F5R
35860
195481
0
0
0.05
1
18.56
5.45
93.6
0.242
1.65
1.68
1494
1.92
80.9
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
RAT TRYPSINOGEN MUTANT COMPLEXED WITH BOVINE PANCREATIC TRYPSIN INHIBITOR
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
ALA
55
A
ALA
46
HELX_P
A
TYR
59
A
TYR
50
5
1
5
A
PRO
164
A
PRO
152
HELX_P
A
TYR
172
A
TYR
160
1
2
9
A
TYR
234
A
TYR
220
HELX_P
A
ALA
244
A
ALA
230
1
3
11
I
PRO
2
B
PRO
2
HELX_P
I
GLU
7
B
GLU
7
5
4
6
I
SER
47
B
SER
47
HELX_P
I
GLY
56
B
GLY
56
1
5
10
disulf
2.029
A
CYS
22
A
SG
CYS
15
1_555
A
CYS
157
A
SG
CYS
145
1_555
disulf
2.033
A
CYS
42
A
SG
CYS
33
1_555
A
CYS
58
A
SG
CYS
49
1_555
disulf
2.031
A
CYS
128
A
SG
CYS
117
1_555
A
CYS
232
A
SG
CYS
218
1_555
disulf
2.028
A
CYS
136
A
SG
CYS
124
1_555
A
CYS
201
A
SG
CYS
191
1_555
disulf
2.029
A
CYS
168
A
SG
CYS
156
1_555
A
CYS
182
A
SG
CYS
170
1_555
disulf
2.035
A
CYS
191
A
SG
CYS
181
1_555
A
CYS
220
A
SG
CYS
205
1_555
disulf
2.032
I
CYS
5
B
SG
CYS
5
1_555
I
CYS
55
B
SG
CYS
55
1_555
disulf
2.033
I
CYS
14
B
SG
CYS
14
1_555
I
CYS
38
B
SG
CYS
38
1_555
disulf
2.029
I
CYS
30
B
SG
CYS
30
1_555
I
CYS
51
B
SG
CYS
51
1_555
metalc
2.317
A
GLU
70
A
OE1
GLU
60
1_555
A
CA
800
C
CA
CA
1_555
metalc
2.508
A
ASN
72
A
O
ASN
62
1_555
A
CA
800
C
CA
CA
1_555
metalc
2.323
A
VAL
75
A
O
VAL
65
1_555
A
CA
800
C
CA
CA
1_555
metalc
2.518
A
GLU
77
A
OE1
GLU
67
1_555
A
CA
800
C
CA
CA
1_555
metalc
2.419
A
GLU
80
A
OE2
GLU
70
1_555
A
CA
800
C
CA
CA
1_555
metalc
2.924
A
HOH
535
D
O
HOH
1_555
A
CA
800
C
CA
CA
1_555
HYDROLASE/HYDROLASE INHIBITOR
SERINE PROTEASE, TRYPSIN PRECURSOR, HYDROLASE-HYDROLASE INHIBITOR COMPLEX
TRY2_RAT
UNP
1
15
P00763
AFPVDDDDKIVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKII
KHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEAS
YPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN
BPT1_BOVIN
UNP
2
36
P00974
RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGPWENL
15
246
1F5R
7
245
P00763
A
1
2
231
36
100
1F5R
1
65
P00974
I
2
1
65
1
cloning artifact
GLU
6
1F5R
A
P00763
UNP
1
1
ILE
deletion
1F5R
A
P00763
UNP
24
1
VAL
deletion
1F5R
A
P00763
UNP
25
1
GLN
engineered mutation
LYS
156
1F5R
A
P00763
UNP
159
144
7
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
20
A
TYR
13
A
THR
21
A
THR
14
A
LYS
156
A
LYS
144
A
PRO
161
A
PRO
149
A
GLN
135
A
GLN
123
A
GLY
140
A
GLY
128
A
PRO
198
A
PRO
188
A
CYS
201
A
CYS
191
A
GLU
204
A
GLU
194
A
TRP
215
A
TRP
201
A
GLY
226
A
GLY
212
A
LYS
230
A
LYS
216
A
MET
180
A
MET
168
A
VAL
183
A
VAL
171
A
GLN
30
A
GLN
23
A
ASN
34
A
ASN
27
A
HIS
40
A
HIS
31
A
ASN
48
A
ASN
39
A
TRP
51
A
TRP
42
A
SER
54
A
SER
45
A
MET
104
A
MET
94
A
LEU
108
A
LEU
98
A
GLN
81
A
GLN
71
A
LYS
90
A
LYS
80
A
GLN
64
A
GLN
55
A
LEU
68
A
LEU
58
A
GLN
30
A
GLN
23
A
ASN
34
A
ASN
27
I
ILE
18
B
ILE
18
I
ASN
24
B
ASN
24
I
LEU
29
B
LEU
29
I
TYR
35
B
TYR
35
BINDING SITE FOR RESIDUE CA A 800
A
CA
800
Software
6
A
GLU
70
A
GLU
60
6
1_555
A
ASN
72
A
ASN
62
6
1_555
A
VAL
75
A
VAL
65
6
1_555
A
GLU
77
A
GLU
67
6
1_555
A
GLU
80
A
GLU
70
6
1_555
A
HOH
535
D
HOH
6
1_555
154
P 32 2 1