HEADER DNA 21-JUN-00 1F6I TITLE CRYSTAL STRUCTURE OF THE E-DNA HEXAMER GGCGM5CC COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*GP*GP*CP*GP*(5CM)P*C)-3'); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES KEYWDS E-DNA, DOUBLE HELIX, METHYLATION, DNA EXPDTA X-RAY DIFFRACTION AUTHOR J.M.VARGASON,B.F.EICHMAN,P.S.HO REVDAT 4 07-FEB-24 1F6I 1 LINK REVDAT 3 24-FEB-09 1F6I 1 VERSN REVDAT 2 28-SEP-00 1F6I 1 JRNL REVDAT 1 28-AUG-00 1F6I 0 JRNL AUTH J.M.VARGASON,B.F.EICHMAN,P.S.HO JRNL TITL THE EXTENDED AND ECCENTRIC E-DNA STRUCTURE INDUCED BY JRNL TITL 2 CYTOSINE METHYLATION OR BROMINATION. JRNL REF NAT.STRUCT.BIOL. V. 7 758 2000 JRNL REFN ISSN 1072-8368 JRNL PMID 10966645 JRNL DOI 10.1038/78985 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR 3.851 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 2402 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 241 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 0 REMARK 3 NUCLEIC ACID ATOMS : 242 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.006 REMARK 3 BOND ANGLES (DEGREES) : 0.900 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1F6I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY NDB. REMARK 100 THE DEPOSITION ID IS D_1000011303. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-DEC-99 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2571 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 500.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 9.000 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.51300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MGCL2, SPERMINE, SODIUM CACODYLATE, PH REMARK 280 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 12.16800 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 31.02900 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 31.02900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.25200 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 31.02900 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 31.02900 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 6.08400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 31.02900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 31.02900 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 18.25200 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 31.02900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 31.02900 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 6.08400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 12.16800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1F69 RELATED DB: PDB REMARK 900 B-DNA HEXAMER GGCGCC WITH COBALT HEXAMINE REMARK 900 RELATED ID: 1F6C RELATED DB: PDB REMARK 900 B-DNA HEXAMER GGCGCC WITH SPERMINE REMARK 900 RELATED ID: 1F6E RELATED DB: PDB REMARK 900 A-DNA HEXAMER GGCGM5CC REMARK 900 RELATED ID: 1F6J RELATED DB: PDB REMARK 900 E-DNA HEXAMER GGCGBR5CC DBREF 1F6I A 1 6 PDB 1F6I 1F6I 1 6 DBREF 1F6I B 7 12 PDB 1F6I 1F6I 7 12 SEQRES 1 A 6 DG DG DC DG 5CM DC SEQRES 1 B 6 DG DG DC DG 5CM DC MODRES 1F6I 5CM A 5 DC MODRES 1F6I 5CM B 11 DC HET 5CM A 5 20 HET 5CM B 11 20 HETNAM 5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE FORMUL 1 5CM 2(C10 H16 N3 O7 P) FORMUL 3 HOH *29(H2 O) LINK O3' DG A 4 P 5CM A 5 1555 1555 1.60 LINK O3' 5CM A 5 P DC A 6 1555 1555 1.61 LINK O3' DG B 10 P 5CM B 11 1555 1555 1.60 LINK O3' 5CM B 11 P DC B 12 1555 1555 1.60 CRYST1 62.058 62.058 24.336 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016114 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016114 0.000000 0.00000 SCALE3 0.000000 0.000000 0.041091 0.00000 ATOM 1 O5' DG A 1 -1.796 12.993 9.554 1.00 82.94 O ATOM 2 C5' DG A 1 -2.829 13.515 10.391 1.00 75.68 C ATOM 3 C4' DG A 1 -4.104 13.773 9.620 1.00 73.56 C ATOM 4 O4' DG A 1 -4.855 14.808 10.298 1.00 72.81 O ATOM 5 C3' DG A 1 -3.866 14.287 8.198 1.00 73.07 C ATOM 6 O3' DG A 1 -4.050 13.224 7.250 1.00 74.98 O ATOM 7 C2' DG A 1 -4.955 15.328 8.028 1.00 71.82 C ATOM 8 C1' DG A 1 -5.026 15.913 9.426 1.00 69.57 C ATOM 9 N9 DG A 1 -3.948 16.857 9.695 1.00 66.12 N ATOM 10 C8 DG A 1 -2.894 16.679 10.555 1.00 67.15 C ATOM 11 N7 DG A 1 -2.058 17.681 10.556 1.00 66.08 N ATOM 12 C5 DG A 1 -2.604 18.582 9.654 1.00 59.14 C ATOM 13 C6 DG A 1 -2.125 19.828 9.217 1.00 51.54 C ATOM 14 O6 DG A 1 -1.110 20.421 9.578 1.00 43.46 O ATOM 15 N1 DG A 1 -2.959 20.390 8.258 1.00 49.58 N ATOM 16 C2 DG A 1 -4.114 19.817 7.787 1.00 51.67 C ATOM 17 N2 DG A 1 -4.779 20.489 6.849 1.00 49.50 N ATOM 18 N3 DG A 1 -4.581 18.657 8.200 1.00 57.90 N ATOM 19 C4 DG A 1 -3.776 18.093 9.123 1.00 62.00 C ATOM 20 P DG A 2 -3.116 13.150 5.940 1.00 73.72 P ATOM 21 OP1 DG A 2 -3.480 11.905 5.215 1.00 80.01 O ATOM 22 OP2 DG A 2 -1.698 13.375 6.337 1.00 77.09 O ATOM 23 O5' DG A 2 -3.597 14.385 5.049 1.00 75.33 O ATOM 24 C5' DG A 2 -4.998 14.597 4.783 1.00 68.39 C ATOM 25 C4' DG A 2 -5.211 15.876 4.003 1.00 64.64 C ATOM 26 O4' DG A 2 -5.173 17.024 4.879 1.00 58.07 O ATOM 27 C3' DG A 2 -4.194 16.172 2.907 1.00 61.60 C ATOM 28 O3' DG A 2 -4.567 15.538 1.674 1.00 64.04 O ATOM 29 C2' DG A 2 -4.335 17.674 2.772 1.00 58.97 C ATOM 30 C1' DG A 2 -4.513 18.103 4.221 1.00 57.53 C ATOM 31 N9 DG A 2 -3.230 18.326 4.879 1.00 55.84 N ATOM 32 C8 DG A 2 -2.534 17.465 5.696 1.00 51.82 C ATOM 33 N7 DG A 2 -1.384 17.948 6.083 1.00 45.78 N ATOM 34 C5 DG A 2 -1.330 19.206 5.501 1.00 42.98 C ATOM 35 C6 DG A 2 -0.328 20.190 5.543 1.00 38.85 C ATOM 36 O6 DG A 2 0.762 20.157 6.129 1.00 35.48 O ATOM 37 N1 DG A 2 -0.686 21.314 4.800 1.00 39.43 N ATOM 38 C2 DG A 2 -1.860 21.462 4.105 1.00 40.06 C ATOM 39 N2 DG A 2 -2.036 22.613 3.449 1.00 45.05 N ATOM 40 N3 DG A 2 -2.797 20.549 4.054 1.00 45.11 N ATOM 41 C4 DG A 2 -2.470 19.455 4.770 1.00 48.25 C ATOM 42 P DC A 3 -3.439 15.219 0.571 1.00 62.11 P ATOM 43 OP1 DC A 3 -4.131 14.854 -0.691 1.00 63.56 O ATOM 44 OP2 DC A 3 -2.417 14.315 1.157 1.00 62.28 O ATOM 45 O5' DC A 3 -2.711 16.608 0.338 1.00 63.54 O ATOM 46 C5' DC A 3 -3.360 17.665 -0.376 1.00 57.51 C ATOM 47 C4' DC A 3 -2.412 18.830 -0.543 1.00 57.36 C ATOM 48 O4' DC A 3 -1.961 19.283 0.747 1.00 51.05 O ATOM 49 C3' DC A 3 -1.138 18.509 -1.313 1.00 54.83 C ATOM 50 O3' DC A 3 -1.321 18.713 -2.720 1.00 57.74 O ATOM 51 C2' DC A 3 -0.178 19.562 -0.792 1.00 55.61 C ATOM 52 C1' DC A 3 -0.725 19.967 0.574 1.00 50.00 C ATOM 53 N1 DC A 3 0.175 19.596 1.669 1.00 43.23 N ATOM 54 C2 DC A 3 1.209 20.467 1.970 1.00 37.17 C ATOM 55 O2 DC A 3 1.275 21.538 1.353 1.00 36.39 O ATOM 56 N3 DC A 3 2.100 20.140 2.915 1.00 35.17 N ATOM 57 C4 DC A 3 1.974 18.996 3.570 1.00 36.21 C ATOM 58 N4 DC A 3 2.897 18.722 4.481 1.00 43.05 N ATOM 59 C5 DC A 3 0.899 18.090 3.317 1.00 37.92 C ATOM 60 C6 DC A 3 0.024 18.429 2.362 1.00 39.69 C ATOM 61 P DG A 4 -0.044 18.679 -3.698 1.00 59.39 P ATOM 62 OP1 DG A 4 -0.550 18.491 -5.081 1.00 64.68 O ATOM 63 OP2 DG A 4 0.969 17.739 -3.142 1.00 54.75 O ATOM 64 O5' DG A 4 0.582 20.143 -3.608 1.00 54.25 O ATOM 65 C5' DG A 4 1.942 20.371 -4.016 1.00 45.40 C ATOM 66 C4' DG A 4 2.428 21.718 -3.533 1.00 37.26 C ATOM 67 O4' DG A 4 2.317 21.812 -2.097 1.00 31.01 O ATOM 68 C3' DG A 4 3.900 21.947 -3.834 1.00 41.01 C ATOM 69 O3' DG A 4 4.063 22.544 -5.124 1.00 51.85 O ATOM 70 C2' DG A 4 4.290 22.931 -2.752 1.00 35.24 C ATOM 71 C1' DG A 4 3.480 22.437 -1.564 1.00 32.35 C ATOM 72 N9 DG A 4 4.178 21.465 -0.729 1.00 29.47 N ATOM 73 C8 DG A 4 3.805 20.172 -0.467 1.00 28.22 C ATOM 74 N7 DG A 4 4.599 19.573 0.380 1.00 28.68 N ATOM 75 C5 DG A 4 5.567 20.524 0.679 1.00 24.29 C ATOM 76 C6 DG A 4 6.658 20.479 1.591 1.00 28.37 C ATOM 77 O6 DG A 4 7.009 19.553 2.338 1.00 33.60 O ATOM 78 N1 DG A 4 7.367 21.675 1.595 1.00 28.01 N ATOM 79 C2 DG A 4 7.060 22.774 0.835 1.00 25.97 C ATOM 80 N2 DG A 4 7.867 23.831 0.961 1.00 28.86 N ATOM 81 N3 DG A 4 6.040 22.835 0.007 1.00 27.58 N ATOM 82 C4 DG A 4 5.339 21.684 -0.021 1.00 25.66 C HETATM 83 N1 5CM A 5 9.230 23.116 -2.186 1.00 40.11 N HETATM 84 C2 5CM A 5 10.197 22.791 -1.252 1.00 40.54 C HETATM 85 N3 5CM A 5 10.212 21.552 -0.710 1.00 36.15 N HETATM 86 C4 5CM A 5 9.300 20.656 -1.076 1.00 31.91 C HETATM 87 C5 5CM A 5 8.324 20.943 -2.064 1.00 28.80 C HETATM 88 C5A 5CM A 5 7.342 19.877 -2.433 1.00 29.91 C HETATM 89 C6 5CM A 5 8.330 22.173 -2.607 1.00 34.46 C HETATM 90 O2 5CM A 5 11.032 23.666 -0.941 1.00 40.79 O HETATM 91 N4 5CM A 5 9.317 19.461 -0.469 1.00 36.10 N HETATM 92 C1' 5CM A 5 9.194 24.500 -2.684 1.00 50.27 C HETATM 93 C2' 5CM A 5 9.913 24.725 -4.002 1.00 58.72 C HETATM 94 C3' 5CM A 5 8.816 24.497 -5.022 1.00 60.57 C HETATM 95 C4' 5CM A 5 7.584 25.047 -4.309 1.00 56.75 C HETATM 96 O4' 5CM A 5 7.834 24.864 -2.898 1.00 53.27 O HETATM 97 O3' 5CM A 5 9.107 25.271 -6.194 1.00 61.75 O HETATM 98 C5' 5CM A 5 6.287 24.357 -4.667 1.00 55.93 C HETATM 99 O5' 5CM A 5 6.540 23.041 -5.196 1.00 52.47 O HETATM 100 P 5CM A 5 5.393 22.237 -5.966 1.00 56.54 P HETATM 101 OP1 5CM A 5 5.182 22.845 -7.306 1.00 61.22 O HETATM 102 OP2 5CM A 5 5.680 20.779 -5.845 1.00 52.85 O ATOM 103 P DC A 6 10.188 24.724 -7.250 1.00 60.74 P ATOM 104 OP1 DC A 6 10.394 25.788 -8.276 1.00 62.14 O ATOM 105 OP2 DC A 6 9.809 23.324 -7.669 1.00 51.75 O ATOM 106 O5' DC A 6 11.525 24.614 -6.401 1.00 56.61 O ATOM 107 C5' DC A 6 12.376 23.470 -6.543 1.00 54.47 C ATOM 108 C4' DC A 6 13.437 23.476 -5.469 1.00 51.38 C ATOM 109 O4' DC A 6 12.839 23.025 -4.239 1.00 47.28 O ATOM 110 C3' DC A 6 14.578 22.506 -5.745 1.00 49.36 C ATOM 111 O3' DC A 6 15.619 23.218 -6.415 1.00 60.23 O ATOM 112 C2' DC A 6 15.020 22.107 -4.351 1.00 46.62 C ATOM 113 C1' DC A 6 13.786 22.291 -3.478 1.00 40.54 C ATOM 114 N1 DC A 6 13.155 21.039 -3.058 1.00 36.07 N ATOM 115 C2 DC A 6 13.700 20.371 -1.974 1.00 39.75 C ATOM 116 O2 DC A 6 14.697 20.885 -1.411 1.00 38.82 O ATOM 117 N3 DC A 6 13.141 19.199 -1.566 1.00 36.35 N ATOM 118 C4 DC A 6 12.078 18.710 -2.211 1.00 32.00 C ATOM 119 N4 DC A 6 11.560 17.562 -1.779 1.00 34.13 N ATOM 120 C5 DC A 6 11.499 19.381 -3.324 1.00 28.08 C ATOM 121 C6 DC A 6 12.064 20.537 -3.710 1.00 29.38 C TER 122 DC A 6 ATOM 123 O5' DG B 7 16.161 13.615 5.432 1.00 63.64 O ATOM 124 C5' DG B 7 17.521 13.647 5.876 1.00 55.53 C ATOM 125 C4' DG B 7 18.201 14.952 5.530 1.00 56.54 C ATOM 126 O4' DG B 7 18.526 14.968 4.122 1.00 54.17 O ATOM 127 C3' DG B 7 17.318 16.175 5.757 1.00 60.90 C ATOM 128 O3' DG B 7 17.547 16.735 7.054 1.00 70.94 O ATOM 129 C2' DG B 7 17.796 17.120 4.673 1.00 54.31 C ATOM 130 C1' DG B 7 17.992 16.143 3.528 1.00 47.43 C ATOM 131 N9 DG B 7 16.735 15.782 2.877 1.00 37.40 N ATOM 132 C8 DG B 7 15.990 14.645 3.070 1.00 33.43 C ATOM 133 N7 DG B 7 14.893 14.622 2.358 1.00 36.70 N ATOM 134 C5 DG B 7 14.919 15.816 1.648 1.00 33.41 C ATOM 135 C6 DG B 7 13.980 16.371 0.726 1.00 34.63 C ATOM 136 O6 DG B 7 12.884 15.902 0.353 1.00 36.22 O ATOM 137 N1 DG B 7 14.417 17.603 0.235 1.00 28.39 N ATOM 138 C2 DG B 7 15.599 18.228 0.604 1.00 33.60 C ATOM 139 N2 DG B 7 15.894 19.408 0.034 1.00 35.94 N ATOM 140 N3 DG B 7 16.452 17.733 1.477 1.00 38.91 N ATOM 141 C4 DG B 7 16.057 16.535 1.950 1.00 35.57 C ATOM 142 P DG B 8 16.354 17.517 7.790 1.00 69.54 P ATOM 143 OP1 DG B 8 16.775 17.770 9.192 1.00 76.97 O ATOM 144 OP2 DG B 8 15.066 16.808 7.517 1.00 63.09 O ATOM 145 O5' DG B 8 16.353 18.916 7.048 1.00 62.58 O ATOM 146 C5' DG B 8 17.567 19.662 6.927 1.00 55.84 C ATOM 147 C4' DG B 8 17.364 20.826 5.985 1.00 62.33 C ATOM 148 O4' DG B 8 17.117 20.332 4.652 1.00 56.67 O ATOM 149 C3' DG B 8 16.160 21.699 6.309 1.00 63.96 C ATOM 150 O3' DG B 8 16.496 22.709 7.271 1.00 68.18 O ATOM 151 C2' DG B 8 15.880 22.330 4.962 1.00 57.09 C ATOM 152 C1' DG B 8 16.190 21.194 3.996 1.00 48.22 C ATOM 153 N9 DG B 8 15.012 20.415 3.642 1.00 36.82 N ATOM 154 C8 DG B 8 14.597 19.210 4.158 1.00 34.28 C ATOM 155 N7 DG B 8 13.493 18.776 3.602 1.00 34.71 N ATOM 156 C5 DG B 8 13.170 19.763 2.677 1.00 30.67 C ATOM 157 C6 DG B 8 12.095 19.862 1.771 1.00 27.39 C ATOM 158 O6 DG B 8 11.159 19.074 1.599 1.00 33.51 O ATOM 159 N1 DG B 8 12.171 21.032 1.013 1.00 30.80 N ATOM 160 C2 DG B 8 13.165 21.986 1.120 1.00 34.39 C ATOM 161 N2 DG B 8 13.104 23.060 0.314 1.00 38.48 N ATOM 162 N3 DG B 8 14.161 21.899 1.964 1.00 35.13 N ATOM 163 C4 DG B 8 14.101 20.775 2.702 1.00 33.78 C ATOM 164 P DC B 9 15.443 23.073 8.429 1.00 63.26 P ATOM 165 OP1 DC B 9 16.201 23.631 9.584 1.00 66.99 O ATOM 166 OP2 DC B 9 14.552 21.899 8.627 1.00 52.48 O ATOM 167 O5' DC B 9 14.590 24.248 7.787 1.00 56.19 O ATOM 168 C5' DC B 9 13.337 23.971 7.167 1.00 46.95 C ATOM 169 C4' DC B 9 13.030 25.029 6.135 1.00 43.45 C ATOM 170 O4' DC B 9 13.244 24.450 4.828 1.00 42.63 O ATOM 171 C3' DC B 9 11.566 25.458 6.160 1.00 46.70 C ATOM 172 O3' DC B 9 11.398 26.667 6.916 1.00 49.07 O ATOM 173 C2' DC B 9 11.276 25.704 4.693 1.00 44.35 C ATOM 174 C1' DC B 9 12.057 24.570 4.058 1.00 39.80 C ATOM 175 N1 DC B 9 11.335 23.292 4.132 1.00 32.73 N ATOM 176 C2 DC B 9 10.307 23.057 3.229 1.00 28.95 C ATOM 177 O2 DC B 9 10.058 23.915 2.366 1.00 36.89 O ATOM 178 N3 DC B 9 9.605 21.914 3.307 1.00 29.38 N ATOM 179 C4 DC B 9 9.903 21.012 4.234 1.00 26.16 C ATOM 180 N4 DC B 9 9.156 19.902 4.273 1.00 28.76 N ATOM 181 C5 DC B 9 10.969 21.208 5.159 1.00 28.28 C ATOM 182 C6 DC B 9 11.656 22.355 5.072 1.00 28.10 C ATOM 183 P DG B 10 10.130 26.816 7.896 1.00 51.61 P ATOM 184 OP1 DG B 10 10.406 27.998 8.744 1.00 52.84 O ATOM 185 OP2 DG B 10 9.830 25.500 8.525 1.00 40.93 O ATOM 186 O5' DG B 10 8.915 27.146 6.916 1.00 45.29 O ATOM 187 C5' DG B 10 9.115 27.995 5.777 1.00 38.81 C ATOM 188 C4' DG B 10 8.016 27.793 4.758 1.00 34.42 C ATOM 189 O4' DG B 10 8.143 26.537 4.065 1.00 28.92 O ATOM 190 C3' DG B 10 6.600 27.800 5.307 1.00 29.76 C ATOM 191 O3' DG B 10 6.145 29.149 5.452 1.00 32.60 O ATOM 192 C2' DG B 10 5.851 27.119 4.180 1.00 30.83 C ATOM 193 C1' DG B 10 6.850 26.080 3.682 1.00 27.30 C ATOM 194 N9 DG B 10 6.638 24.771 4.284 1.00 27.16 N ATOM 195 C8 DG B 10 7.343 24.200 5.309 1.00 22.82 C ATOM 196 N7 DG B 10 6.887 23.023 5.639 1.00 27.23 N ATOM 197 C5 DG B 10 5.827 22.807 4.770 1.00 22.57 C ATOM 198 C6 DG B 10 4.946 21.706 4.644 1.00 29.77 C ATOM 199 O6 DG B 10 4.935 20.647 5.285 1.00 37.63 O ATOM 200 N1 DG B 10 4.004 21.917 3.641 1.00 30.07 N ATOM 201 C2 DG B 10 3.936 23.041 2.852 1.00 26.54 C ATOM 202 N2 DG B 10 2.971 23.082 1.928 1.00 26.36 N ATOM 203 N3 DG B 10 4.757 24.058 2.957 1.00 27.04 N ATOM 204 C4 DG B 10 5.667 23.876 3.929 1.00 24.64 C HETATM 205 N1 5CM B 11 1.658 25.577 4.199 1.00 25.95 N HETATM 206 C2 5CM B 11 0.905 24.413 4.278 1.00 21.60 C HETATM 207 N3 5CM B 11 1.211 23.487 5.199 1.00 19.65 N HETATM 208 C4 5CM B 11 2.226 23.691 6.032 1.00 20.86 C HETATM 209 C5 5CM B 11 2.989 24.889 6.009 1.00 25.83 C HETATM 210 C5A 5CM B 11 4.051 25.104 7.038 1.00 18.59 C HETATM 211 C6 5CM B 11 2.692 25.790 5.064 1.00 28.74 C HETATM 212 O2 5CM B 11 -0.033 24.262 3.493 1.00 26.68 O HETATM 213 N4 5CM B 11 2.526 22.722 6.892 1.00 24.19 N HETATM 214 C1' 5CM B 11 1.311 26.574 3.177 1.00 25.46 C HETATM 215 C2' 5CM B 11 0.140 27.457 3.592 1.00 22.15 C HETATM 216 C3' 5CM B 11 0.852 28.594 4.296 1.00 24.07 C HETATM 217 C4' 5CM B 11 2.056 28.777 3.388 1.00 20.72 C HETATM 218 O4' 5CM B 11 2.432 27.440 3.004 1.00 21.21 O HETATM 219 O3' 5CM B 11 0.028 29.763 4.319 1.00 29.20 O HETATM 220 C5' 5CM B 11 3.233 29.492 4.009 1.00 24.40 C HETATM 221 O5' 5CM B 11 3.672 28.793 5.177 1.00 32.40 O HETATM 222 P 5CM B 11 4.737 29.441 6.161 1.00 24.72 P HETATM 223 OP1 5CM B 11 4.581 30.900 6.156 1.00 36.55 O HETATM 224 OP2 5CM B 11 4.645 28.702 7.437 1.00 31.48 O ATOM 225 P DC B 12 -0.860 30.066 5.616 1.00 25.69 P ATOM 226 OP1 DC B 12 -1.492 31.377 5.407 1.00 34.64 O ATOM 227 OP2 DC B 12 -0.029 29.848 6.807 1.00 22.53 O ATOM 228 O5' DC B 12 -1.995 28.964 5.527 1.00 22.09 O ATOM 229 C5' DC B 12 -2.808 28.858 4.350 1.00 25.45 C ATOM 230 C4' DC B 12 -3.874 27.801 4.531 1.00 28.14 C ATOM 231 O4' DC B 12 -3.267 26.497 4.432 1.00 32.18 O ATOM 232 C3' DC B 12 -4.596 27.815 5.873 1.00 26.56 C ATOM 233 O3' DC B 12 -5.794 28.600 5.839 1.00 27.21 O ATOM 234 C2' DC B 12 -5.003 26.365 6.036 1.00 27.52 C ATOM 235 C1' DC B 12 -3.917 25.585 5.311 1.00 25.82 C ATOM 236 N1 DC B 12 -2.905 25.020 6.209 1.00 31.08 N ATOM 237 C2 DC B 12 -3.093 23.745 6.688 1.00 31.53 C ATOM 238 O2 DC B 12 -4.112 23.143 6.349 1.00 38.97 O ATOM 239 N3 DC B 12 -2.172 23.200 7.510 1.00 27.03 N ATOM 240 C4 DC B 12 -1.094 23.900 7.851 1.00 28.61 C ATOM 241 N4 DC B 12 -0.212 23.333 8.661 1.00 33.82 N ATOM 242 C5 DC B 12 -0.874 25.218 7.378 1.00 26.36 C ATOM 243 C6 DC B 12 -1.799 25.738 6.566 1.00 32.08 C TER 244 DC B 12 HETATM 245 O HOH A 17 2.224 18.938 8.736 1.00 60.07 O HETATM 246 O HOH A 19 8.364 16.863 0.389 1.00 60.73 O HETATM 247 O HOH A 21 0.074 16.670 7.183 1.00 90.24 O HETATM 248 O HOH A 22 10.242 16.171 -3.153 1.00 86.35 O HETATM 249 O HOH A 30 0.240 20.629 12.122 1.00 94.07 O HETATM 250 O HOH A 32 8.267 28.229 -7.870 1.00 47.59 O HETATM 251 O HOH A 37 5.211 17.240 2.460 1.00 76.09 O HETATM 252 O HOH A 40 11.940 20.065 -8.363 1.00 99.51 O HETATM 253 O HOH B 13 1.545 25.349 9.810 1.00 31.29 O HETATM 254 O HOH B 14 1.338 31.779 8.680 1.00 46.75 O HETATM 255 O HOH B 15 1.850 27.980 8.362 1.00 41.72 O HETATM 256 O HOH B 16 4.416 22.044 9.075 1.00 56.75 O HETATM 257 O HOH B 18 7.605 21.294 7.521 1.00 62.79 O HETATM 258 O HOH B 20 -2.339 25.617 1.808 1.00 52.14 O HETATM 259 O HOH B 23 13.920 28.660 8.922 1.00 96.42 O HETATM 260 O HOH B 24 5.982 24.860 10.253 1.00 88.73 O HETATM 261 O HOH B 25 -8.174 31.604 6.313 1.00 44.10 O HETATM 262 O HOH B 26 12.763 16.894 4.938 1.00 63.73 O HETATM 263 O HOH B 27 13.173 20.168 8.442 1.00 72.05 O HETATM 264 O HOH B 28 2.104 33.274 5.527 1.00 52.25 O HETATM 265 O HOH B 29 -5.301 30.578 2.294 1.00 63.76 O HETATM 266 O HOH B 31 -5.964 30.790 5.797 1.00 68.91 O HETATM 267 O HOH B 33 10.723 16.811 1.822 1.00 93.48 O HETATM 268 O HOH B 34 3.702 31.543 9.719 1.00 78.32 O HETATM 269 O HOH B 35 5.467 27.173 9.624 1.00 66.18 O HETATM 270 O HOH B 36 12.968 13.381 2.212 1.00 71.76 O HETATM 271 O HOH B 38 5.756 18.186 6.813 1.00 88.59 O HETATM 272 O HOH B 39 -5.068 27.584 0.970 1.00 72.47 O HETATM 273 O HOH B 41 -3.069 33.242 6.341 1.00 91.49 O CONECT 69 100 CONECT 83 84 89 92 CONECT 84 83 85 90 CONECT 85 84 86 CONECT 86 85 87 91 CONECT 87 86 88 89 CONECT 88 87 CONECT 89 83 87 CONECT 90 84 CONECT 91 86 CONECT 92 83 93 96 CONECT 93 92 94 CONECT 94 93 95 97 CONECT 95 94 96 98 CONECT 96 92 95 CONECT 97 94 103 CONECT 98 95 99 CONECT 99 98 100 CONECT 100 69 99 101 102 CONECT 101 100 CONECT 102 100 CONECT 103 97 CONECT 191 222 CONECT 205 206 211 214 CONECT 206 205 207 212 CONECT 207 206 208 CONECT 208 207 209 213 CONECT 209 208 210 211 CONECT 210 209 CONECT 211 205 209 CONECT 212 206 CONECT 213 208 CONECT 214 205 215 218 CONECT 215 214 216 CONECT 216 215 217 219 CONECT 217 216 218 220 CONECT 218 214 217 CONECT 219 216 225 CONECT 220 217 221 CONECT 221 220 222 CONECT 222 191 221 223 224 CONECT 223 222 CONECT 224 222 CONECT 225 219 MASTER 225 0 2 0 0 0 0 6 271 2 44 2 END