0.019152
0.011057
0.000000
0.000000
0.022115
0.000000
0.000000
0.000000
0.006339
0.00000
0.00000
0.00000
Nymalm, Y.
Kravchuk, Z.
Salminen, T.
Chumanevich, A.A.
Dubnovitsky, A.P.
Kankare, J.
Pentikainen, O.
Lehtonen, J.
Arosio, P.
Martsev, S.
Johnson, M.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
52.214
52.214
157.750
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.STRUCT.BIOL.
JSBIEM
0803
1047-8477
138
171
186
10.1016/S1047-8477(02)00015-1
12217656
Antiferritin VL homodimer binds human spleen ferritin with high specificity
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
295
1
IMAGE PLATE
1998-10-19
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
12709.074
ANTI-FERRITIN IMMUNOGLOBULIN LIGHT CHAIN
VARIABLE LIGHT CHAIN
1
man
polymer
18.015
water
8
nat
water
no
no
DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP
EDFGSYYCQHHYGTPFTFGSGTKLEIKRHHHHHH
DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP
EDFGSYYCQHHYGTPFTFGSGTKLEIKRHHHHHH
L
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
SPLEEN
Homo sapiens
562
Escherichia coli
PETVL
1
2.44
49.61
VAPOR DIFFUSION, HANGING DROP
7.2
PEG 400, ammonium sulfate, hepes, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
diffrn_source
repository
Initial release
Version format compliance
Version format compliance
Data collection
1
0
2002-10-23
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-04-04
_diffrn_source.type
RCSB
Y
RCSB
2000-06-22
REL
HOH
water
HOH
101
2
HOH
HOH
115
L
HOH
102
2
HOH
HOH
116
L
HOH
103
2
HOH
HOH
117
L
HOH
104
2
HOH
HOH
118
L
HOH
105
2
HOH
HOH
119
L
HOH
106
2
HOH
HOH
120
L
HOH
107
2
HOH
HOH
121
L
HOH
108
2
HOH
HOH
122
L
ASP
1
n
1
ASP
1
L
ILE
2
n
2
ILE
2
L
GLN
3
n
3
GLN
3
L
MET
4
n
4
MET
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
SER
7
n
7
SER
7
L
PRO
8
n
8
PRO
8
L
ALA
9
n
9
ALA
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
SER
12
n
12
SER
12
L
ALA
13
n
13
ALA
13
L
SER
14
n
14
SER
14
L
VAL
15
n
15
VAL
15
L
GLY
16
n
16
GLY
16
L
GLU
17
n
17
GLU
17
L
THR
18
n
18
THR
18
L
VAL
19
n
19
VAL
19
L
THR
20
n
20
THR
20
L
ILE
21
n
21
ILE
21
L
THR
22
n
22
THR
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
ALA
25
n
25
ALA
25
L
SER
26
n
26
SER
26
L
GLU
27
n
27
GLU
27
L
ASN
28
n
28
ASN
28
L
ILE
29
n
29
ILE
29
L
TYR
30
n
30
TYR
30
L
SER
31
n
31
SER
31
L
TYR
32
n
32
TYR
32
L
LEU
33
n
33
LEU
33
L
ALA
34
n
34
ALA
34
L
TRP
35
n
35
TRP
35
L
TYR
36
n
36
TYR
36
L
GLN
37
n
37
GLN
37
L
GLN
38
n
38
GLN
38
L
LYS
39
n
39
LYS
39
L
GLN
40
n
40
GLN
40
L
GLY
41
n
41
GLY
41
L
LYS
42
n
42
LYS
42
L
SER
43
n
43
SER
43
L
PRO
44
n
44
PRO
44
L
GLN
45
n
45
GLN
45
L
LEU
46
n
46
LEU
46
L
LEU
47
n
47
LEU
47
L
VAL
48
n
48
VAL
48
L
TYR
49
n
49
TYR
49
L
ASN
50
n
50
ASN
50
L
ALA
51
n
51
ALA
51
L
LYS
52
n
52
LYS
52
L
THR
53
n
53
THR
53
L
LEU
54
n
54
LEU
54
L
ALA
55
n
55
ALA
55
L
GLU
56
n
56
GLU
56
L
GLY
57
n
57
GLY
57
L
VAL
58
n
58
VAL
58
L
PRO
59
n
59
PRO
59
L
SER
60
n
60
SER
60
L
ARG
61
n
61
ARG
61
L
PHE
62
n
62
PHE
62
L
SER
63
n
63
SER
63
L
GLY
64
n
64
GLY
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
GLY
68
n
68
GLY
68
L
THR
69
n
69
THR
69
L
GLN
70
n
70
GLN
70
L
PHE
71
n
71
PHE
71
L
SER
72
n
72
SER
72
L
LEU
73
n
73
LEU
73
L
LYS
74
n
74
LYS
74
L
ILE
75
n
75
ILE
75
L
ASN
76
n
76
ASN
76
L
SER
77
n
77
SER
77
L
LEU
78
n
78
LEU
78
L
GLN
79
n
79
GLN
79
L
PRO
80
n
80
PRO
80
L
GLU
81
n
81
GLU
81
L
ASP
82
n
82
ASP
82
L
PHE
83
n
83
PHE
83
L
GLY
84
n
84
GLY
84
L
SER
85
n
85
SER
85
L
TYR
86
n
86
TYR
86
L
TYR
87
n
87
TYR
87
L
CYS
88
n
88
CYS
88
L
GLN
89
n
89
GLN
89
L
HIS
90
n
90
HIS
90
L
HIS
91
n
91
HIS
91
L
TYR
92
n
92
TYR
92
L
GLY
93
n
93
GLY
93
L
THR
94
n
94
THR
94
L
PRO
95
n
95
PRO
95
L
PHE
96
n
96
PHE
96
L
THR
97
n
97
THR
97
L
PHE
98
n
98
PHE
98
L
GLY
99
n
99
GLY
99
L
SER
100
n
100
SER
100
L
GLY
101
n
101
GLY
101
L
THR
102
n
102
THR
102
L
LYS
103
n
103
LYS
103
L
LEU
104
n
104
LEU
104
L
GLU
105
n
105
GLU
105
L
ILE
106
n
106
ILE
106
L
n
107
107
L
n
108
108
L
n
109
109
L
n
110
110
L
n
111
111
L
n
112
112
L
n
113
113
L
n
114
114
L
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
9_765
-x+2,-x+y+1,-z+2/3
crystal symmetry operation
78.3210000000
45.2186504332
105.1666666667
L
O
SER
7
A
O
SER
7
L
N
THR
22
A
N
THR
22
L
N
CYS
23
A
N
CYS
23
L
O
PHE
71
A
O
PHE
71
L
N
LYS
74
A
N
LYS
74
L
O
SER
63
A
O
SER
63
L
N
LEU
11
A
N
LEU
11
L
O
LYS
103
A
O
LYS
103
L
N
LEU
104
A
N
LEU
104
L
O
GLY
84
A
O
GLY
84
L
O
GLN
89
A
O
GLN
89
L
N
ALA
34
A
N
ALA
34
L
O
GLN
37
A
O
GLN
37
L
N
GLN
45
A
N
GLN
45
L
O
TYR
49
A
O
TYR
49
L
N
THR
53
A
N
THR
53
1
L
LYS
107
A
LYS
107
1
Y
1
L
ARG
108
A
ARG
108
1
Y
1
L
HIS
109
A
HIS
109
1
Y
1
L
HIS
110
A
HIS
110
1
Y
1
L
HIS
111
A
HIS
111
1
Y
1
L
HIS
112
A
HIS
112
1
Y
1
L
HIS
113
A
HIS
113
1
Y
1
L
HIS
114
A
HIS
114
1
Y
1
L
TYR
30
59.76
-104.53
1
L
GLN
40
52.27
-127.00
1
L
ALA
51
70.01
-45.83
1
L
LYS
52
-140.34
18.74
1
L
PRO
59
-42.68
151.60
1
L
SER
77
40.87
77.89
1
L
TYR
92
-101.64
-98.78
0.257
0.191
2.8
500
328
3553
3335
93.9
RANDOM
1
0.0
Engh & Huber
2.8
500
8
824
0
0
816
2.8
30
1F6L
3589
3445
-3
0.099
1
11.3
96.3
0.323
2.8
2.9
315
90.5
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
ANTI-FERRITIN IMMUNOGLOBULIN LIGHT CHAIN
VARIABLE LIGHT CHAIN DIMER OF ANTI-FERRITIN ANTIBODY
1
N
N
2
N
N
L
GLN
79
A
GLN
79
HELX_P
L
PHE
83
A
PHE
83
5
1
5
disulf
2.017
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
88
1_555
IMMUNE SYSTEM
immunoglobulin fold, variable light chain, dimer, anti-ferritin antibody, IMMUNE SYSTEM
L
SER
7
A
SER
7
1
L
PRO
8
A
PRO
8
0.21
L
THR
94
A
THR
94
1
L
PRO
95
A
PRO
95
-0.05
KV1H_HUMAN
UNP
1
21
P01600
DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQP
EDFGSYYCQHHYGTPFTFGSGTKLEIKR
21
128
1F6L
1
108
P01600
L
1
1
108
1
EXPRESSION TAG
HIS
109
1F6L
L
P01600
UNP
109
1
EXPRESSION TAG
HIS
110
1F6L
L
P01600
UNP
110
1
EXPRESSION TAG
HIS
111
1F6L
L
P01600
UNP
111
1
EXPRESSION TAG
HIS
112
1F6L
L
P01600
UNP
112
1
EXPRESSION TAG
HIS
113
1F6L
L
P01600
UNP
113
1
EXPRESSION TAG
HIS
114
1F6L
L
P01600
UNP
114
4
6
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
MET
4
A
MET
4
L
SER
7
A
SER
7
L
VAL
19
A
VAL
19
L
ALA
25
A
ALA
25
L
GLN
70
A
GLN
70
L
ILE
75
A
ILE
75
L
PHE
62
A
PHE
62
L
SER
67
A
SER
67
L
SER
10
A
SER
10
L
SER
12
A
SER
12
L
THR
102
A
THR
102
L
GLU
105
A
GLU
105
L
GLY
84
A
GLY
84
L
HIS
90
A
HIS
90
L
LEU
33
A
LEU
33
L
GLN
38
A
GLN
38
L
GLN
45
A
GLN
45
L
TYR
49
A
TYR
49
L
THR
53
A
THR
53
L
LEU
54
A
LEU
54
178
P 61 2 2