0.010283
0.000000
0.000000
0.000000
0.010283
0.000000
0.000000
0.000000
0.006687
0.00000
0.00000
0.00000
Okada, T.
Palczewski, K.
Stenkamp, R.E.
Miyano, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
97.246
97.246
149.544
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
Hg 2
200.590
MERCURY (II) ION
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C20 H28 O
284.436
RETINAL
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
US
Science
SCIEAS
0038
0036-8075
289
739
745
10.1126/science.289.5480.739
10926528
Crystal structure of rhodopsin: A G protein-coupled receptor.
2000
MAN E 3 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
1999-12-12
SBC-2
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
19-ID
APS
1.000
SYNCHROTRON
APS BEAMLINE 19-ID
39031.457
RHODOPSIN
2
nat
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3
man
branched
586.542
alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
200.590
MERCURY (II) ION
6
syn
non-polymer
65.409
ZINC ION
4
syn
non-polymer
284.436
RETINAL
2
syn
non-polymer
18.015
water
27
nat
water
no
no
MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLA
VADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFT
WVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES
ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTT
LCCGKNPLGDDEASTTVSKTETSQVAPA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
BOVINE RETINA, ROD CELL OUTER SEGMENTS
Bos
sample
9913
RETINA
Bos taurus
1
4.1
70
VAPOR DIFFUSION, HANGING DROP
6.0
MES, 2-mercaptoethanol, zinc acetate,
heptanetriol, nonyl-glucoside,
ammonium sulfate are in the hanging drops. mercury acetate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 4K, temperature 277K
277
atom_site
chem_comp
database_PDB_caveat
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_validate_chiral
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
1
0
2000-08-04
1
1
2008-04-27
1
2
2011-07-13
2
0
2020-07-29
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.occupancy
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.src_method
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_seq_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
NAG
501
n
C
NAG
1
NAG
502
n
C
NAG
2
NAG
701
n
D
NAG
1
NAG
702
n
D
NAG
2
NAG
601
n
E
NAG
1
NAG
602
n
E
NAG
2
MAN
603
n
E
MAN
3
NAG
801
n
F
NAG
1
NAG
802
n
F
NAG
2
DManpa
a-D-mannopyranose
a-D-Manp
Man
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2000-06-29
REL
oligosaccharide
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
DManpa1-4DGlcpNAcb1-4DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5]/1-1-2/a4-b1_b4-c1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}
3
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
C1
O4
MAN
NAG
3
2
3
O1
HO4
sing
n
n
n
n
n
HG
MERCURY (II) ION
ZN
ZINC ION
RET
RETINAL
HOH
water
HG2
901
4
HG
HG
901
A
HG2
903
4
HG
HG
903
A
HG2
905
4
HG
HG
905
A
ZN2
907
5
ZN
ZN
907
A
ZN2
910
5
ZN
ZN
910
A
RET
296
6
RET
RET
977
A
HG2
902
4
HG
HG
902
B
HG2
904
4
HG
HG
904
B
HG2
906
4
HG
HG
906
B
ZN2
908
5
ZN
ZN
908
B
ZN2
909
5
ZN
ZN
909
B
RET
296
6
RET
RET
978
B
WAT
950
7
HOH
HOH
950
A
WAT
952
7
HOH
HOH
952
A
WAT
953
7
HOH
HOH
953
A
WAT
958
7
HOH
HOH
958
A
WAT
959
7
HOH
HOH
959
A
WAT
962
7
HOH
HOH
962
A
WAT
963
7
HOH
HOH
963
A
WAT
964
7
HOH
HOH
964
A
WAT
965
7
HOH
HOH
965
A
WAT
966
7
HOH
HOH
966
A
WAT
967
7
HOH
HOH
967
A
WAT
968
7
HOH
HOH
968
A
WAT
970
7
HOH
HOH
970
A
WAT
971
7
HOH
HOH
971
A
WAT
972
7
HOH
HOH
972
A
WAT
974
7
HOH
HOH
974
A
WAT
951
7
HOH
HOH
951
B
WAT
954
7
HOH
HOH
954
B
WAT
955
7
HOH
HOH
955
B
WAT
956
7
HOH
HOH
956
B
WAT
957
7
HOH
HOH
957
B
WAT
960
7
HOH
HOH
960
B
WAT
961
7
HOH
HOH
961
B
WAT
969
7
HOH
HOH
969
B
WAT
973
7
HOH
HOH
973
B
WAT
975
7
HOH
HOH
975
B
WAT
976
7
HOH
HOH
976
B
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
GLY
3
n
3
GLY
3
A
THR
4
n
4
THR
4
A
GLU
5
n
5
GLU
5
A
GLY
6
n
6
GLY
6
A
PRO
7
n
7
PRO
7
A
ASN
8
n
8
ASN
8
A
PHE
9
n
9
PHE
9
A
TYR
10
n
10
TYR
10
A
VAL
11
n
11
VAL
11
A
PRO
12
n
12
PRO
12
A
PHE
13
n
13
PHE
13
A
SER
14
n
14
SER
14
A
ASN
15
n
15
ASN
15
A
LYS
16
n
16
LYS
16
A
THR
17
n
17
THR
17
A
GLY
18
n
18
GLY
18
A
VAL
19
n
19
VAL
19
A
VAL
20
n
20
VAL
20
A
ARG
21
n
21
ARG
21
A
SER
22
n
22
SER
22
A
PRO
23
n
23
PRO
23
A
PHE
24
n
24
PHE
24
A
GLN
25
n
25
GLU
25
A
ALA
26
n
26
ALA
26
A
PRO
27
n
27
PRO
27
A
GLN
28
n
28
GLN
28
A
TYR
29
n
29
TYR
29
A
TYR
30
n
30
TYR
30
A
LEU
31
n
31
LEU
31
A
ALA
32
n
32
ALA
32
A
GLU
33
n
33
GLU
33
A
PRO
34
n
34
PRO
34
A
TRP
35
n
35
TRP
35
A
GLN
36
n
36
GLN
36
A
PHE
37
n
37
PHE
37
A
SER
38
n
38
SER
38
A
MET
39
n
39
MET
39
A
LEU
40
n
40
LEU
40
A
ALA
41
n
41
ALA
41
A
ALA
42
n
42
ALA
42
A
TYR
43
n
43
TYR
43
A
MET
44
n
44
MET
44
A
PHE
45
n
45
PHE
45
A
LEU
46
n
46
LEU
46
A
LEU
47
n
47
LEU
47
A
ILE
48
n
48
ILE
48
A
MET
49
n
49
MET
49
A
LEU
50
n
50
LEU
50
A
GLY
51
n
51
GLY
51
A
PHE
52
n
52
PHE
52
A
PRO
53
n
53
PRO
53
A
ILE
54
n
54
ILE
54
A
ASN
55
n
55
ASN
55
A
PHE
56
n
56
PHE
56
A
LEU
57
n
57
LEU
57
A
THR
58
n
58
THR
58
A
LEU
59
n
59
LEU
59
A
TYR
60
n
60
TYR
60
A
VAL
61
n
61
VAL
61
A
THR
62
n
62
THR
62
A
VAL
63
n
63
VAL
63
A
GLN
64
n
64
GLN
64
A
HIS
65
n
65
HIS
65
A
LYS
66
n
66
LYS
66
A
LYS
67
n
67
LYS
67
A
LEU
68
n
68
LEU
68
A
ARG
69
n
69
ARG
69
A
THR
70
n
70
THR
70
A
PRO
71
n
71
PRO
71
A
LEU
72
n
72
LEU
72
A
ASN
73
n
73
ASN
73
A
TYR
74
n
74
TYR
74
A
ILE
75
n
75
ILE
75
A
LEU
76
n
76
LEU
76
A
LEU
77
n
77
LEU
77
A
ASN
78
n
78
ASN
78
A
LEU
79
n
79
LEU
79
A
ALA
80
n
80
ALA
80
A
VAL
81
n
81
VAL
81
A
ALA
82
n
82
ALA
82
A
ASP
83
n
83
ASP
83
A
LEU
84
n
84
LEU
84
A
PHE
85
n
85
PHE
85
A
MET
86
n
86
MET
86
A
VAL
87
n
87
VAL
87
A
PHE
88
n
88
PHE
88
A
GLY
89
n
89
GLY
89
A
GLY
90
n
90
GLY
90
A
PHE
91
n
91
PHE
91
A
THR
92
n
92
THR
92
A
THR
93
n
93
THR
93
A
THR
94
n
94
THR
94
A
LEU
95
n
95
LEU
95
A
TYR
96
n
96
TYR
96
A
THR
97
n
97
THR
97
A
SER
98
n
98
SER
98
A
LEU
99
n
99
LEU
99
A
HIS
100
n
100
HIS
100
A
GLY
101
n
101
GLY
101
A
TYR
102
n
102
TYR
102
A
PHE
103
n
103
PHE
103
A
VAL
104
n
104
VAL
104
A
PHE
105
n
105
PHE
105
A
GLY
106
n
106
GLY
106
A
PRO
107
n
107
PRO
107
A
THR
108
n
108
THR
108
A
GLY
109
n
109
GLY
109
A
CYS
110
n
110
CYS
110
A
ASN
111
n
111
ASN
111
A
LEU
112
n
112
LEU
112
A
GLU
113
n
113
GLU
113
A
GLY
114
n
114
GLY
114
A
PHE
115
n
115
PHE
115
A
PHE
116
n
116
PHE
116
A
ALA
117
n
117
ALA
117
A
THR
118
n
118
THR
118
A
LEU
119
n
119
LEU
119
A
GLY
120
n
120
GLY
120
A
GLY
121
n
121
GLY
121
A
GLU
122
n
122
GLU
122
A
ILE
123
n
123
ILE
123
A
ALA
124
n
124
ALA
124
A
LEU
125
n
125
LEU
125
A
TRP
126
n
126
TRP
126
A
SER
127
n
127
SER
127
A
LEU
128
n
128
LEU
128
A
VAL
129
n
129
VAL
129
A
VAL
130
n
130
VAL
130
A
LEU
131
n
131
LEU
131
A
ALA
132
n
132
ALA
132
A
ILE
133
n
133
ILE
133
A
GLU
134
n
134
GLU
134
A
ARG
135
n
135
ARG
135
A
TYR
136
n
136
TYR
136
A
VAL
137
n
137
VAL
137
A
VAL
138
n
138
VAL
138
A
VAL
139
n
139
VAL
139
A
CYS
140
n
140
CYS
140
A
LYS
141
n
141
LYS
141
A
PRO
142
n
142
PRO
142
A
MET
143
n
143
MET
143
A
SER
144
n
144
SER
144
A
ASN
145
n
145
ASN
145
A
PHE
146
n
146
PHE
146
A
ARG
147
n
147
ARG
147
A
PHE
148
n
148
PHE
148
A
GLY
149
n
149
GLY
149
A
GLU
150
n
150
GLU
150
A
ASN
151
n
151
ASN
151
A
HIS
152
n
152
HIS
152
A
ALA
153
n
153
ALA
153
A
ILE
154
n
154
ILE
154
A
MET
155
n
155
MET
155
A
GLY
156
n
156
GLY
156
A
VAL
157
n
157
VAL
157
A
ALA
158
n
158
ALA
158
A
PHE
159
n
159
PHE
159
A
THR
160
n
160
THR
160
A
TRP
161
n
161
TRP
161
A
VAL
162
n
162
VAL
162
A
MET
163
n
163
MET
163
A
ALA
164
n
164
ALA
164
A
LEU
165
n
165
LEU
165
A
ALA
166
n
166
ALA
166
A
CYS
167
n
167
CYS
167
A
ALA
168
n
168
ALA
168
A
ALA
169
n
169
ALA
169
A
PRO
170
n
170
PRO
170
A
PRO
171
n
171
PRO
171
A
LEU
172
n
172
LEU
172
A
VAL
173
n
173
VAL
173
A
GLY
174
n
174
GLY
174
A
TRP
175
n
175
TRP
175
A
SER
176
n
176
SER
176
A
ARG
177
n
177
ARG
177
A
TYR
178
n
178
TYR
178
A
ILE
179
n
179
ILE
179
A
PRO
180
n
180
PRO
180
A
GLU
181
n
181
GLU
181
A
GLY
182
n
182
GLY
182
A
MET
183
n
183
MET
183
A
GLN
184
n
184
GLN
184
A
CYS
185
n
185
CYS
185
A
SER
186
n
186
SER
186
A
CYS
187
n
187
CYS
187
A
GLY
188
n
188
GLY
188
A
ILE
189
n
189
ILE
189
A
ASP
190
n
190
ASP
190
A
TYR
191
n
191
TYR
191
A
TYR
192
n
192
TYR
192
A
THR
193
n
193
THR
193
A
PRO
194
n
194
PRO
194
A
HIS
195
n
195
HIS
195
A
GLU
196
n
196
GLU
196
A
GLU
197
n
197
GLU
197
A
THR
198
n
198
THR
198
A
ASN
199
n
199
ASN
199
A
ASN
200
n
200
ASN
200
A
GLU
201
n
201
GLU
201
A
SER
202
n
202
SER
202
A
PHE
203
n
203
PHE
203
A
VAL
204
n
204
VAL
204
A
ILE
205
n
205
ILE
205
A
TYR
206
n
206
TYR
206
A
MET
207
n
207
MET
207
A
PHE
208
n
208
PHE
208
A
VAL
209
n
209
VAL
209
A
VAL
210
n
210
VAL
210
A
HIS
211
n
211
HIS
211
A
PHE
212
n
212
PHE
212
A
ILE
213
n
213
ILE
213
A
ILE
214
n
214
ILE
214
A
PRO
215
n
215
PRO
215
A
LEU
216
n
216
LEU
216
A
ILE
217
n
217
ILE
217
A
VAL
218
n
218
VAL
218
A
ILE
219
n
219
ILE
219
A
PHE
220
n
220
PHE
220
A
PHE
221
n
221
PHE
221
A
CYS
222
n
222
CYS
222
A
TYR
223
n
223
TYR
223
A
GLY
224
n
224
GLY
224
A
GLN
225
n
225
GLN
225
A
LEU
226
n
226
LEU
226
A
VAL
227
n
227
VAL
227
A
PHE
228
n
228
PHE
228
A
THR
229
n
229
THR
229
A
VAL
230
n
230
VAL
230
A
LYS
231
n
231
LYS
231
A
GLU
232
n
232
GLU
232
A
ALA
233
n
233
ALA
233
A
ALA
234
n
234
ALA
234
A
ALA
235
n
235
ALA
235
A
n
236
236
A
n
237
237
A
n
238
238
A
n
239
239
A
SER
240
n
240
SER
240
A
ALA
241
n
241
ALA
241
A
THR
242
n
242
THR
242
A
THR
243
n
243
THR
243
A
GLN
244
n
244
GLN
244
A
LYS
245
n
245
LYS
245
A
ALA
246
n
246
ALA
246
A
GLU
247
n
247
GLU
247
A
LYS
248
n
248
LYS
248
A
GLU
249
n
249
GLU
249
A
VAL
250
n
250
VAL
250
A
THR
251
n
251
THR
251
A
ARG
252
n
252
ARG
252
A
MET
253
n
253
MET
253
A
VAL
254
n
254
VAL
254
A
ILE
255
n
255
ILE
255
A
ILE
256
n
256
ILE
256
A
MET
257
n
257
MET
257
A
VAL
258
n
258
VAL
258
A
ILE
259
n
259
ILE
259
A
ALA
260
n
260
ALA
260
A
PHE
261
n
261
PHE
261
A
LEU
262
n
262
LEU
262
A
ILE
263
n
263
ILE
263
A
CYS
264
n
264
CYS
264
A
TRP
265
n
265
TRP
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
TYR
268
n
268
TYR
268
A
ALA
269
n
269
ALA
269
A
GLY
270
n
270
GLY
270
A
VAL
271
n
271
VAL
271
A
ALA
272
n
272
ALA
272
A
PHE
273
n
273
PHE
273
A
TYR
274
n
274
TYR
274
A
ILE
275
n
275
ILE
275
A
PHE
276
n
276
PHE
276
A
THR
277
n
277
THR
277
A
HIS
278
n
278
HIS
278
A
GLN
279
n
279
GLN
279
A
GLY
280
n
280
GLY
280
A
SER
281
n
281
SER
281
A
ASP
282
n
282
ASP
282
A
PHE
283
n
283
PHE
283
A
GLY
284
n
284
GLY
284
A
PRO
285
n
285
PRO
285
A
ILE
286
n
286
ILE
286
A
PHE
287
n
287
PHE
287
A
MET
288
n
288
MET
288
A
THR
289
n
289
THR
289
A
ILE
290
n
290
ILE
290
A
PRO
291
n
291
PRO
291
A
ALA
292
n
292
ALA
292
A
PHE
293
n
293
PHE
293
A
PHE
294
n
294
PHE
294
A
ALA
295
n
295
ALA
295
A
LYS
296
n
296
LYS
296
A
THR
297
n
297
THR
297
A
SER
298
n
298
SER
298
A
ALA
299
n
299
ALA
299
A
VAL
300
n
300
VAL
300
A
TYR
301
n
301
TYR
301
A
ASN
302
n
302
ASN
302
A
PRO
303
n
303
PRO
303
A
VAL
304
n
304
VAL
304
A
ILE
305
n
305
ILE
305
A
TYR
306
n
306
TYR
306
A
ILE
307
n
307
ILE
307
A
MET
308
n
308
MET
308
A
MET
309
n
309
MET
309
A
ASN
310
n
310
ASN
310
A
LYS
311
n
311
LYS
311
A
GLN
312
n
312
GLN
312
A
PHE
313
n
313
PHE
313
A
ARG
314
n
314
ARG
314
A
ASN
315
n
315
ASN
315
A
CYS
316
n
316
CYS
316
A
MET
317
n
317
MET
317
A
VAL
318
n
318
VAL
318
A
THR
319
n
319
THR
319
A
THR
320
n
320
THR
320
A
LEU
321
n
321
LEU
321
A
CYS
322
n
322
CYS
322
A
CYS
323
n
323
CYS
323
A
GLY
324
n
324
GLY
324
A
LYS
325
n
325
LYS
325
A
ASN
326
n
326
ASN
326
A
PRO
327
n
327
PRO
327
A
n
328
328
A
n
329
329
A
n
330
330
A
n
331
331
A
n
332
332
A
n
333
333
A
SER
334
n
334
SER
334
A
THR
335
n
335
THR
335
A
THR
336
n
336
THR
336
A
VAL
337
n
337
VAL
337
A
SER
338
n
338
SER
338
A
LYS
339
n
339
LYS
339
A
THR
340
n
340
THR
340
A
GLU
341
n
341
GLU
341
A
THR
342
n
342
THR
342
A
SER
343
n
343
SER
343
A
GLN
344
n
344
GLN
344
A
VAL
345
n
345
VAL
345
A
ALA
346
n
346
ALA
346
A
PRO
347
n
347
PRO
347
A
ALA
348
n
348
ALA
348
A
MET
1
n
1
MET
1
B
ASN
2
n
2
ASN
2
B
GLY
3
n
3
GLY
3
B
THR
4
n
4
THR
4
B
GLU
5
n
5
GLU
5
B
GLY
6
n
6
GLY
6
B
PRO
7
n
7
PRO
7
B
ASN
8
n
8
ASN
8
B
PHE
9
n
9
PHE
9
B
TYR
10
n
10
TYR
10
B
VAL
11
n
11
VAL
11
B
PRO
12
n
12
PRO
12
B
PHE
13
n
13
PHE
13
B
SER
14
n
14
SER
14
B
ASN
15
n
15
ASN
15
B
LYS
16
n
16
LYS
16
B
THR
17
n
17
THR
17
B
GLY
18
n
18
GLY
18
B
VAL
19
n
19
VAL
19
B
VAL
20
n
20
VAL
20
B
ARG
21
n
21
ARG
21
B
SER
22
n
22
SER
22
B
PRO
23
n
23
PRO
23
B
PHE
24
n
24
PHE
24
B
GLN
25
n
25
GLU
25
B
ALA
26
n
26
ALA
26
B
PRO
27
n
27
PRO
27
B
GLN
28
n
28
GLN
28
B
TYR
29
n
29
TYR
29
B
TYR
30
n
30
TYR
30
B
LEU
31
n
31
LEU
31
B
ALA
32
n
32
ALA
32
B
GLU
33
n
33
GLU
33
B
PRO
34
n
34
PRO
34
B
TRP
35
n
35
TRP
35
B
GLN
36
n
36
GLN
36
B
PHE
37
n
37
PHE
37
B
SER
38
n
38
SER
38
B
MET
39
n
39
MET
39
B
LEU
40
n
40
LEU
40
B
ALA
41
n
41
ALA
41
B
ALA
42
n
42
ALA
42
B
TYR
43
n
43
TYR
43
B
MET
44
n
44
MET
44
B
PHE
45
n
45
PHE
45
B
LEU
46
n
46
LEU
46
B
LEU
47
n
47
LEU
47
B
ILE
48
n
48
ILE
48
B
MET
49
n
49
MET
49
B
LEU
50
n
50
LEU
50
B
GLY
51
n
51
GLY
51
B
PHE
52
n
52
PHE
52
B
PRO
53
n
53
PRO
53
B
ILE
54
n
54
ILE
54
B
ASN
55
n
55
ASN
55
B
PHE
56
n
56
PHE
56
B
LEU
57
n
57
LEU
57
B
THR
58
n
58
THR
58
B
LEU
59
n
59
LEU
59
B
TYR
60
n
60
TYR
60
B
VAL
61
n
61
VAL
61
B
THR
62
n
62
THR
62
B
VAL
63
n
63
VAL
63
B
GLN
64
n
64
GLN
64
B
HIS
65
n
65
HIS
65
B
LYS
66
n
66
LYS
66
B
LYS
67
n
67
LYS
67
B
LEU
68
n
68
LEU
68
B
ARG
69
n
69
ARG
69
B
THR
70
n
70
THR
70
B
PRO
71
n
71
PRO
71
B
LEU
72
n
72
LEU
72
B
ASN
73
n
73
ASN
73
B
TYR
74
n
74
TYR
74
B
ILE
75
n
75
ILE
75
B
LEU
76
n
76
LEU
76
B
LEU
77
n
77
LEU
77
B
ASN
78
n
78
ASN
78
B
LEU
79
n
79
LEU
79
B
ALA
80
n
80
ALA
80
B
VAL
81
n
81
VAL
81
B
ALA
82
n
82
ALA
82
B
ASP
83
n
83
ASP
83
B
LEU
84
n
84
LEU
84
B
PHE
85
n
85
PHE
85
B
MET
86
n
86
MET
86
B
VAL
87
n
87
VAL
87
B
PHE
88
n
88
PHE
88
B
GLY
89
n
89
GLY
89
B
GLY
90
n
90
GLY
90
B
PHE
91
n
91
PHE
91
B
THR
92
n
92
THR
92
B
THR
93
n
93
THR
93
B
THR
94
n
94
THR
94
B
LEU
95
n
95
LEU
95
B
TYR
96
n
96
TYR
96
B
THR
97
n
97
THR
97
B
SER
98
n
98
SER
98
B
LEU
99
n
99
LEU
99
B
HIS
100
n
100
HIS
100
B
GLY
101
n
101
GLY
101
B
TYR
102
n
102
TYR
102
B
PHE
103
n
103
PHE
103
B
VAL
104
n
104
VAL
104
B
PHE
105
n
105
PHE
105
B
GLY
106
n
106
GLY
106
B
PRO
107
n
107
PRO
107
B
THR
108
n
108
THR
108
B
GLY
109
n
109
GLY
109
B
CYS
110
n
110
CYS
110
B
ASN
111
n
111
ASN
111
B
LEU
112
n
112
LEU
112
B
GLU
113
n
113
GLU
113
B
GLY
114
n
114
GLY
114
B
PHE
115
n
115
PHE
115
B
PHE
116
n
116
PHE
116
B
ALA
117
n
117
ALA
117
B
THR
118
n
118
THR
118
B
LEU
119
n
119
LEU
119
B
GLY
120
n
120
GLY
120
B
GLY
121
n
121
GLY
121
B
GLU
122
n
122
GLU
122
B
ILE
123
n
123
ILE
123
B
ALA
124
n
124
ALA
124
B
LEU
125
n
125
LEU
125
B
TRP
126
n
126
TRP
126
B
SER
127
n
127
SER
127
B
LEU
128
n
128
LEU
128
B
VAL
129
n
129
VAL
129
B
VAL
130
n
130
VAL
130
B
LEU
131
n
131
LEU
131
B
ALA
132
n
132
ALA
132
B
ILE
133
n
133
ILE
133
B
GLU
134
n
134
GLU
134
B
ARG
135
n
135
ARG
135
B
TYR
136
n
136
TYR
136
B
VAL
137
n
137
VAL
137
B
VAL
138
n
138
VAL
138
B
VAL
139
n
139
VAL
139
B
CYS
140
n
140
CYS
140
B
LYS
141
n
141
LYS
141
B
PRO
142
n
142
PRO
142
B
n
143
143
B
n
144
144
B
n
145
145
B
n
146
146
B
n
147
147
B
PHE
148
n
148
PHE
148
B
GLY
149
n
149
GLY
149
B
GLU
150
n
150
GLU
150
B
ASN
151
n
151
ASN
151
B
HIS
152
n
152
HIS
152
B
ALA
153
n
153
ALA
153
B
ILE
154
n
154
ILE
154
B
MET
155
n
155
MET
155
B
GLY
156
n
156
GLY
156
B
VAL
157
n
157
VAL
157
B
ALA
158
n
158
ALA
158
B
PHE
159
n
159
PHE
159
B
THR
160
n
160
THR
160
B
TRP
161
n
161
TRP
161
B
VAL
162
n
162
VAL
162
B
MET
163
n
163
MET
163
B
ALA
164
n
164
ALA
164
B
LEU
165
n
165
LEU
165
B
ALA
166
n
166
ALA
166
B
CYS
167
n
167
CYS
167
B
ALA
168
n
168
ALA
168
B
ALA
169
n
169
ALA
169
B
PRO
170
n
170
PRO
170
B
PRO
171
n
171
PRO
171
B
LEU
172
n
172
LEU
172
B
VAL
173
n
173
VAL
173
B
GLY
174
n
174
GLY
174
B
TRP
175
n
175
TRP
175
B
SER
176
n
176
SER
176
B
ARG
177
n
177
ARG
177
B
TYR
178
n
178
TYR
178
B
ILE
179
n
179
ILE
179
B
PRO
180
n
180
PRO
180
B
GLU
181
n
181
GLU
181
B
GLY
182
n
182
GLY
182
B
MET
183
n
183
MET
183
B
GLN
184
n
184
GLN
184
B
CYS
185
n
185
CYS
185
B
SER
186
n
186
SER
186
B
CYS
187
n
187
CYS
187
B
GLY
188
n
188
GLY
188
B
ILE
189
n
189
ILE
189
B
ASP
190
n
190
ASP
190
B
TYR
191
n
191
TYR
191
B
TYR
192
n
192
TYR
192
B
THR
193
n
193
THR
193
B
PRO
194
n
194
PRO
194
B
HIS
195
n
195
HIS
195
B
GLU
196
n
196
GLU
196
B
GLU
197
n
197
GLU
197
B
THR
198
n
198
THR
198
B
ASN
199
n
199
ASN
199
B
ASN
200
n
200
ASN
200
B
GLU
201
n
201
GLU
201
B
SER
202
n
202
SER
202
B
PHE
203
n
203
PHE
203
B
VAL
204
n
204
VAL
204
B
ILE
205
n
205
ILE
205
B
TYR
206
n
206
TYR
206
B
MET
207
n
207
MET
207
B
PHE
208
n
208
PHE
208
B
VAL
209
n
209
VAL
209
B
VAL
210
n
210
VAL
210
B
HIS
211
n
211
HIS
211
B
PHE
212
n
212
PHE
212
B
ILE
213
n
213
ILE
213
B
ILE
214
n
214
ILE
214
B
PRO
215
n
215
PRO
215
B
LEU
216
n
216
LEU
216
B
ILE
217
n
217
ILE
217
B
VAL
218
n
218
VAL
218
B
ILE
219
n
219
ILE
219
B
PHE
220
n
220
PHE
220
B
PHE
221
n
221
PHE
221
B
CYS
222
n
222
CYS
222
B
TYR
223
n
223
TYR
223
B
GLY
224
n
224
GLY
224
B
GLN
225
n
225
GLN
225
B
LEU
226
n
226
LEU
226
B
n
227
227
B
n
228
228
B
n
229
229
B
n
230
230
B
n
231
231
B
n
232
232
B
n
233
233
B
n
234
234
B
n
235
235
B
n
236
236
B
n
237
237
B
n
238
238
B
n
239
239
B
n
240
240
B
n
241
241
B
n
242
242
B
THR
243
n
243
THR
243
B
GLN
244
n
244
GLN
244
B
LYS
245
n
245
LYS
245
B
ALA
246
n
246
ALA
246
B
GLU
247
n
247
GLU
247
B
LYS
248
n
248
LYS
248
B
GLU
249
n
249
GLU
249
B
VAL
250
n
250
VAL
250
B
THR
251
n
251
THR
251
B
ARG
252
n
252
ARG
252
B
MET
253
n
253
MET
253
B
VAL
254
n
254
VAL
254
B
ILE
255
n
255
ILE
255
B
ILE
256
n
256
ILE
256
B
MET
257
n
257
MET
257
B
VAL
258
n
258
VAL
258
B
ILE
259
n
259
ILE
259
B
ALA
260
n
260
ALA
260
B
PHE
261
n
261
PHE
261
B
LEU
262
n
262
LEU
262
B
ILE
263
n
263
ILE
263
B
CYS
264
n
264
CYS
264
B
TRP
265
n
265
TRP
265
B
LEU
266
n
266
LEU
266
B
PRO
267
n
267
PRO
267
B
TYR
268
n
268
TYR
268
B
ALA
269
n
269
ALA
269
B
GLY
270
n
270
GLY
270
B
VAL
271
n
271
VAL
271
B
ALA
272
n
272
ALA
272
B
PHE
273
n
273
PHE
273
B
TYR
274
n
274
TYR
274
B
ILE
275
n
275
ILE
275
B
PHE
276
n
276
PHE
276
B
THR
277
n
277
THR
277
B
HIS
278
n
278
HIS
278
B
GLN
279
n
279
GLN
279
B
GLY
280
n
280
GLY
280
B
SER
281
n
281
SER
281
B
ASP
282
n
282
ASP
282
B
PHE
283
n
283
PHE
283
B
GLY
284
n
284
GLY
284
B
PRO
285
n
285
PRO
285
B
ILE
286
n
286
ILE
286
B
PHE
287
n
287
PHE
287
B
MET
288
n
288
MET
288
B
THR
289
n
289
THR
289
B
ILE
290
n
290
ILE
290
B
PRO
291
n
291
PRO
291
B
ALA
292
n
292
ALA
292
B
PHE
293
n
293
PHE
293
B
PHE
294
n
294
PHE
294
B
ALA
295
n
295
ALA
295
B
LYS
296
n
296
LYS
296
B
THR
297
n
297
THR
297
B
SER
298
n
298
SER
298
B
ALA
299
n
299
ALA
299
B
VAL
300
n
300
VAL
300
B
TYR
301
n
301
TYR
301
B
ASN
302
n
302
ASN
302
B
PRO
303
n
303
PRO
303
B
VAL
304
n
304
VAL
304
B
ILE
305
n
305
ILE
305
B
TYR
306
n
306
TYR
306
B
ILE
307
n
307
ILE
307
B
MET
308
n
308
MET
308
B
MET
309
n
309
MET
309
B
ASN
310
n
310
ASN
310
B
LYS
311
n
311
LYS
311
B
GLN
312
n
312
GLN
312
B
PHE
313
n
313
PHE
313
B
ARG
314
n
314
ARG
314
B
ASN
315
n
315
ASN
315
B
CYS
316
n
316
CYS
316
B
MET
317
n
317
MET
317
B
VAL
318
n
318
VAL
318
B
THR
319
n
319
THR
319
B
THR
320
n
320
THR
320
B
LEU
321
n
321
LEU
321
B
CYS
322
n
322
CYS
322
B
CYS
323
n
323
CYS
323
B
GLY
324
n
324
GLY
324
B
LYS
325
n
325
LYS
325
B
ASN
326
n
326
ASN
326
B
n
327
327
B
n
328
328
B
n
329
329
B
n
330
330
B
n
331
331
B
n
332
332
B
n
333
333
B
n
334
334
B
n
335
335
B
n
336
336
B
n
337
337
B
n
338
338
B
n
339
339
B
n
340
340
B
n
341
341
B
n
342
342
B
n
343
343
B
n
344
344
B
n
345
345
B
n
346
346
B
n
347
347
B
n
348
348
B
software_defined_assembly
PISA
2
dimeric
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
6760
-266
27870
A
ALA
132
A
O
ALA
132
1_555
A
HG
903
H
HG
HG
1_555
A
CYS
222
A
SG
CYS
222
1_555
49.3
A
ALA
132
A
O
ALA
132
1_555
A
HG
903
H
HG
HG
1_555
A
TYR
223
A
N
TYR
223
1_555
121.9
A
CYS
222
A
SG
CYS
222
1_555
A
HG
903
H
HG
HG
1_555
A
TYR
223
A
N
TYR
223
1_555
77.3
A
GLU
196
A
OE2
GLU
196
2_655
B
ZN
908
P
ZN
ZN
1_555
A
GLU
196
A
OE1
GLU
196
2_655
57.3
A
GLU
201
A
OE1
GLU
201
1_555
A
ZN
907
J
ZN
ZN
1_555
A
GLN
279
A
NE2
GLN
279
1_555
110.4
A
CYS
264
A
SG
CYS
264
1_555
A
HG
901
G
HG
HG
1_555
A
THR
297
A
OG1
THR
297
1_555
76.0
A
GLN
312
A
O
GLN
312
1_555
A
HG
905
I
HG
HG
1_555
A
CYS
316
A
SG
CYS
316
1_555
75.9
B
HIS
65
B
ND1
HIS
65
1_555
B
HG
906
O
HG
HG
1_555
B
CYS
316
B
SG
CYS
316
1_555
105.3
B
ALA
132
B
O
ALA
132
1_555
B
HG
904
N
HG
HG
1_555
B
CYS
222
B
SG
CYS
222
1_555
48.7
B
ALA
132
B
O
ALA
132
1_555
B
HG
904
N
HG
HG
1_555
B
CYS
222
B
O
CYS
222
1_555
99.9
B
CYS
222
B
SG
CYS
222
1_555
B
HG
904
N
HG
HG
1_555
B
CYS
222
B
O
CYS
222
1_555
58.9
B
ALA
132
B
O
ALA
132
1_555
B
HG
904
N
HG
HG
1_555
B
TYR
223
B
N
TYR
223
1_555
120.5
B
CYS
222
B
SG
CYS
222
1_555
B
HG
904
N
HG
HG
1_555
B
TYR
223
B
N
TYR
223
1_555
71.8
B
CYS
222
B
O
CYS
222
1_555
B
HG
904
N
HG
HG
1_555
B
TYR
223
B
N
TYR
223
1_555
38.1
B
ALA
260
B
O
ALA
260
1_555
B
HG
902
M
HG
HG
1_555
B
CYS
264
B
SG
CYS
264
1_555
88.6
B
ALA
260
B
O
ALA
260
1_555
B
HG
902
M
HG
HG
1_555
B
THR
297
B
OG1
THR
297
1_555
152.1
B
CYS
264
B
SG
CYS
264
1_555
B
HG
902
M
HG
HG
1_555
B
THR
297
B
OG1
THR
297
1_555
69.3
B
ASN
15
GLYCOSYLATION SITE
B
ASN
15
ASN
A
ASN
15
GLYCOSYLATION SITE
A
ASN
15
ASN
B
ASN
2
GLYCOSYLATION SITE
B
ASN
2
ASN
A
ASN
2
GLYCOSYLATION SITE
A
ASN
2
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
4
A
O
THR
4
A
N
VAL
11
A
N
VAL
11
A
N
GLU
181
A
N
GLU
181
A
O
SER
186
A
O
SER
186
B
O
THR
4
B
O
THR
4
B
N
VAL
11
B
N
VAL
11
B
N
GLU
181
B
N
GLU
181
B
O
SER
186
B
O
SER
186
1
A
OG
SER
334
A
OG
SER
334
1
Y
1
A
CB
THR
335
A
CB
THR
335
1
Y
1
A
OG1
THR
335
A
OG1
THR
335
1
Y
1
A
CG2
THR
335
A
CG2
THR
335
1
Y
1
A
OG1
THR
336
A
OG1
THR
336
1
Y
1
A
CG2
THR
336
A
CG2
THR
336
1
Y
1
A
CG1
VAL
337
A
CG1
VAL
337
1
Y
1
A
CG2
VAL
337
A
CG2
VAL
337
1
Y
1
A
OG
SER
338
A
OG
SER
338
1
Y
1
A
CG
LYS
339
A
CG
LYS
339
1
Y
1
A
CD
LYS
339
A
CD
LYS
339
1
Y
1
A
CE
LYS
339
A
CE
LYS
339
1
Y
1
A
NZ
LYS
339
A
NZ
LYS
339
1
Y
1
A
OG1
THR
340
A
OG1
THR
340
1
Y
1
A
CG2
THR
340
A
CG2
THR
340
1
Y
1
A
CG
GLU
341
A
CG
GLU
341
1
Y
1
A
CD
GLU
341
A
CD
GLU
341
1
Y
1
A
OE1
GLU
341
A
OE1
GLU
341
1
Y
1
A
OE2
GLU
341
A
OE2
GLU
341
1
Y
1
A
OG1
THR
342
A
OG1
THR
342
1
Y
1
A
CG2
THR
342
A
CG2
THR
342
1
Y
1
A
OG
SER
343
A
OG
SER
343
1
Y
1
A
CG
GLN
344
A
CG
GLN
344
1
Y
1
A
CD
GLN
344
A
CD
GLN
344
1
Y
1
A
OE1
GLN
344
A
OE1
GLN
344
1
Y
1
A
NE2
GLN
344
A
NE2
GLN
344
1
Y
1
A
CG1
VAL
345
A
CG1
VAL
345
1
Y
1
A
CG2
VAL
345
A
CG2
VAL
345
1
Y
1
A
CG
PRO
347
A
CG
PRO
347
1
Y
1
A
CD
PRO
347
A
CD
PRO
347
1
Y
1
A
GLN
236
A
GLN
236
1
Y
1
A
GLN
237
A
GLN
237
1
Y
1
A
GLN
238
A
GLN
238
1
Y
1
A
GLU
239
A
GLU
239
1
Y
1
A
LEU
328
A
LEU
328
1
Y
1
A
GLY
329
A
GLY
329
1
Y
1
A
ASP
330
A
ASP
330
1
Y
1
A
ASP
331
A
ASP
331
1
Y
1
A
GLU
332
A
GLU
332
1
Y
1
A
ALA
333
A
ALA
333
1
Y
1
B
MET
143
B
MET
143
1
Y
1
B
SER
144
B
SER
144
1
Y
1
B
ASN
145
B
ASN
145
1
Y
1
B
PHE
146
B
PHE
146
1
Y
1
B
ARG
147
B
ARG
147
1
Y
1
B
VAL
227
B
VAL
227
1
Y
1
B
PHE
228
B
PHE
228
1
Y
1
B
THR
229
B
THR
229
1
Y
1
B
VAL
230
B
VAL
230
1
Y
1
B
LYS
231
B
LYS
231
1
Y
1
B
GLU
232
B
GLU
232
1
Y
1
B
ALA
233
B
ALA
233
1
Y
1
B
ALA
234
B
ALA
234
1
Y
1
B
ALA
235
B
ALA
235
1
Y
1
B
GLN
236
B
GLN
236
1
Y
1
B
GLN
237
B
GLN
237
1
Y
1
B
GLN
238
B
GLN
238
1
Y
1
B
GLU
239
B
GLU
239
1
Y
1
B
SER
240
B
SER
240
1
Y
1
B
ALA
241
B
ALA
241
1
Y
1
B
THR
242
B
THR
242
1
Y
1
B
PRO
327
B
PRO
327
1
Y
1
B
LEU
328
B
LEU
328
1
Y
1
B
GLY
329
B
GLY
329
1
Y
1
B
ASP
330
B
ASP
330
1
Y
1
B
ASP
331
B
ASP
331
1
Y
1
B
GLU
332
B
GLU
332
1
Y
1
B
ALA
333
B
ALA
333
1
Y
1
B
SER
334
B
SER
334
1
Y
1
B
THR
335
B
THR
335
1
Y
1
B
THR
336
B
THR
336
1
Y
1
B
VAL
337
B
VAL
337
1
Y
1
B
SER
338
B
SER
338
1
Y
1
B
LYS
339
B
LYS
339
1
Y
1
B
THR
340
B
THR
340
1
Y
1
B
GLU
341
B
GLU
341
1
Y
1
B
THR
342
B
THR
342
1
Y
1
B
SER
343
B
SER
343
1
Y
1
B
GLN
344
B
GLN
344
1
Y
1
B
VAL
345
B
VAL
345
1
Y
1
B
ALA
346
B
ALA
346
1
Y
1
B
PRO
347
B
PRO
347
1
Y
1
B
ALA
348
B
ALA
348
1
Y
1
E
C1
MAN
3
WRONG HAND
1
A
A
CD
OE2
GLU
GLU
25
25
0.079
0.011
1.252
1.331
N
1
B
B
CD
OE2
GLU
GLU
25
25
0.083
0.011
1.252
1.335
N
1
A
PRO
12
-71.16
28.31
1
A
PRO
23
-67.32
9.49
1
A
GLN
28
-92.01
31.33
1
A
ALA
32
173.33
159.55
1
A
GLU
33
-46.65
152.44
1
A
PHE
52
-68.82
-70.61
1
A
VAL
137
-48.41
-15.60
1
A
CYS
140
-76.24
42.89
1
A
MET
143
60.25
-129.54
1
A
SER
144
-159.43
-21.66
1
A
ASN
145
-163.72
-17.26
1
A
SER
176
58.32
-165.65
1
A
HIS
195
27.46
60.95
1
A
GLU
196
-46.72
-16.95
1
A
GLU
197
-110.79
51.82
1
A
THR
198
-167.55
2.04
1
A
PHE
212
-168.90
-69.27
1
A
LEU
226
-74.75
33.55
1
A
THR
229
-114.50
-85.53
1
A
LYS
231
-55.76
-80.02
1
A
GLU
232
-145.40
-14.21
1
A
ALA
234
172.17
37.40
1
A
THR
242
-100.99
-60.00
1
A
THR
243
-144.77
-132.71
1
A
PHE
287
-27.93
-64.80
1
A
LYS
339
-64.67
16.74
1
A
GLU
341
105.56
97.14
1
A
THR
342
28.56
62.47
1
A
SER
343
-75.29
23.73
1
A
ALA
346
-141.23
31.90
1
A
PRO
347
-74.50
-148.62
1
B
TYR
10
-167.25
95.84
1
B
PRO
12
-67.76
62.14
1
B
ASN
15
-92.97
34.15
1
B
GLN
28
-94.96
33.58
1
B
LYS
67
-97.78
30.13
1
B
VAL
139
-132.07
-43.43
1
B
LYS
141
19.90
92.10
1
B
GLU
150
-60.82
4.47
1
B
ASN
151
-101.74
-74.65
1
B
SER
176
70.18
179.79
1
B
MET
183
-75.45
24.25
1
B
ASP
190
-67.94
81.87
1
B
HIS
195
29.97
77.61
1
B
ASN
199
33.00
67.22
1
B
PHE
212
-147.46
-76.07
1
B
HIS
278
-97.28
53.34
1
B
GLN
279
-66.27
99.13
1
B
SER
281
-54.24
-179.47
1
B
ASP
282
-107.64
47.14
1
B
MET
309
-117.42
59.48
1
B
ASN
310
-166.39
85.81
twinned R factor as calculated by CNS
Twin fraction 0.288
0.238
0.186
2.8
30.00
1525
34209
30094
88.0
RANDOM
1
0
Engh & Huber
2.8
30.00
27
5267
173
0
5067
0.0112
1.49
56.5
2.8
30
1F88
34214
33221
1.2
0.121
1
9.5
3.35
97
0.69
2.8
2.9
2747
1
2.5
80.7
data reduction
DENZO
data scaling
SCALEPACK
phasing
SHARP
refinement
CNS
RHODOPSIN
CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
2
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
6
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
6
N
N
7
N
N
7
N
N
A
GLN
28
A
GLN
28
HELX_P
A
ALA
32
A
ALA
32
5
1
5
A
GLU
33
A
GLU
33
HELX_P
A
HIS
65
A
HIS
65
1
2
33
A
THR
70
A
THR
70
HELX_P
A
GLY
90
A
GLY
90
1
3
21
A
GLY
90
A
GLY
90
HELX_P
A
GLY
101
A
GLY
101
1
4
12
A
PHE
105
A
PHE
105
HELX_P
A
CYS
140
A
CYS
140
1
5
36
A
GLY
149
A
GLY
149
HELX_P
A
ALA
169
A
ALA
169
1
6
21
A
PRO
170
A
PRO
170
HELX_P
A
VAL
173
A
VAL
173
5
7
4
A
ASN
199
A
ASN
199
HELX_P
A
HIS
211
A
HIS
211
1
8
13
A
PHE
212
A
PHE
212
HELX_P
A
LEU
226
A
LEU
226
1
9
15
A
LYS
245
A
LYS
245
HELX_P
A
ILE
255
A
ILE
255
1
10
11
A
ILE
255
A
ILE
255
HELX_P
A
HIS
278
A
HIS
278
1
11
24
A
GLY
284
A
GLY
284
HELX_P
A
LYS
296
A
LYS
296
1
12
13
A
THR
297
A
THR
297
HELX_P
A
ALA
299
A
ALA
299
5
13
3
A
VAL
300
A
VAL
300
HELX_P
A
ASN
310
A
ASN
310
1
14
11
A
ASN
310
A
ASN
310
HELX_P
A
CYS
322
A
CYS
322
1
15
13
B
GLU
33
B
GLU
33
HELX_P
B
HIS
65
B
HIS
65
1
16
33
B
THR
70
B
THR
70
HELX_P
B
GLY
90
B
GLY
90
1
17
21
B
GLY
90
B
GLY
90
HELX_P
B
LEU
99
B
LEU
99
1
18
10
B
GLY
106
B
GLY
106
HELX_P
B
VAL
138
B
VAL
138
1
19
33
B
HIS
152
B
HIS
152
HELX_P
B
ALA
169
B
ALA
169
1
20
18
B
ALA
169
B
ALA
169
HELX_P
B
GLY
174
B
GLY
174
1
21
6
B
ASN
199
B
ASN
199
HELX_P
B
HIS
211
B
HIS
211
1
22
13
B
PHE
212
B
PHE
212
HELX_P
B
GLN
225
B
GLN
225
1
23
14
B
ALA
246
B
ALA
246
HELX_P
B
HIS
278
B
HIS
278
1
24
33
B
PRO
285
B
PRO
285
HELX_P
B
ALA
295
B
ALA
295
1
25
11
B
THR
297
B
THR
297
HELX_P
B
MET
309
B
MET
309
1
26
13
B
ASN
310
B
ASN
310
HELX_P
B
CYS
323
B
CYS
323
1
27
14
disulf
2.026
A
CYS
110
A
SG
CYS
110
1_555
A
CYS
187
A
SG
CYS
187
1_555
disulf
2.031
B
CYS
110
B
SG
CYS
110
1_555
B
CYS
187
B
SG
CYS
187
1_555
covale
1.450
one
N-Glycosylation
A
ASN
2
A
ND2
ASN
2
1_555
D
NAG
1
D
C1
NAG
1_555
covale
1.445
one
N-Glycosylation
A
ASN
15
A
ND2
ASN
15
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.458
one
A
LYS
296
A
NZ
LYS
296
1_555
A
RET
977
L
C15
RET
1_555
covale
1.450
one
N-Glycosylation
B
ASN
2
B
ND2
ASN
2
1_555
F
NAG
1
F
C1
NAG
1_555
covale
1.441
one
N-Glycosylation
B
ASN
15
B
ND2
ASN
15
1_555
E
NAG
1
E
C1
NAG
1_555
covale
1.459
one
B
LYS
296
B
NZ
LYS
296
1_555
B
RET
978
R
C15
RET
1_555
covale
1.395
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.391
both
D
NAG
1
D
O4
NAG
1_555
D
NAG
2
D
C1
NAG
1_555
covale
1.380
both
E
NAG
1
E
O4
NAG
1_555
E
NAG
2
E
C1
NAG
1_555
covale
1.394
both
E
NAG
2
E
O4
NAG
1_555
E
MAN
3
E
C1
MAN
1_555
covale
1.386
both
F
NAG
1
F
O4
NAG
1_555
F
NAG
2
F
C1
NAG
1_555
metalc
3.388
A
ALA
132
A
O
ALA
132
1_555
A
HG
903
H
HG
HG
1_555
metalc
2.254
A
GLU
196
A
OE2
GLU
196
2_655
B
ZN
908
P
ZN
ZN
1_555
metalc
2.346
A
GLU
196
A
OE1
GLU
196
2_655
B
ZN
908
P
ZN
ZN
1_555
metalc
2.557
A
GLU
201
A
OE1
GLU
201
1_555
A
ZN
907
J
ZN
ZN
1_555
metalc
2.164
A
CYS
222
A
SG
CYS
222
1_555
A
HG
903
H
HG
HG
1_555
metalc
3.473
A
TYR
223
A
N
TYR
223
1_555
A
HG
903
H
HG
HG
1_555
metalc
2.712
A
CYS
264
A
SG
CYS
264
1_555
A
HG
901
G
HG
HG
1_555
metalc
2.243
A
GLN
279
A
NE2
GLN
279
1_555
A
ZN
907
J
ZN
ZN
1_555
metalc
3.125
A
THR
297
A
OG1
THR
297
1_555
A
HG
901
G
HG
HG
1_555
metalc
3.295
A
GLN
312
A
O
GLN
312
1_555
A
HG
905
I
HG
HG
1_555
metalc
2.290
A
CYS
316
A
SG
CYS
316
1_555
A
HG
905
I
HG
HG
1_555
metalc
3.468
B
HIS
65
B
ND1
HIS
65
1_555
B
HG
906
O
HG
HG
1_555
metalc
3.218
B
ALA
132
B
O
ALA
132
1_555
B
HG
904
N
HG
HG
1_555
metalc
2.511
B
HIS
195
B
NE2
HIS
195
1_555
B
ZN
909
Q
ZN
ZN
1_555
metalc
3.028
B
CYS
222
B
SG
CYS
222
1_555
B
HG
904
N
HG
HG
1_555
metalc
3.367
B
CYS
222
B
O
CYS
222
1_555
B
HG
904
N
HG
HG
1_555
metalc
3.521
B
TYR
223
B
N
TYR
223
1_555
B
HG
904
N
HG
HG
1_555
metalc
3.089
B
ALA
260
B
O
ALA
260
1_555
B
HG
902
M
HG
HG
1_555
metalc
2.127
B
CYS
264
B
SG
CYS
264
1_555
B
HG
902
M
HG
HG
1_555
metalc
3.411
B
THR
297
B
OG1
THR
297
1_555
B
HG
902
M
HG
HG
1_555
metalc
2.101
B
CYS
316
B
SG
CYS
316
1_555
B
HG
906
O
HG
HG
1_555
SIGNALING PROTEIN
PHOTORECEPTOR, G PROTEIN-COUPLED RECEPTOR, MEMBRANE PROTEIN, RETINAL PROTEIN, VISUAL PIGMENT, SIGNALING PROTEIN
OPSD_BOVIN
UNP
1
P02699
1
348
1F88
1
348
P02699
A
1
1
348
1
348
1F88
1
348
P02699
B
1
1
348
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
4
A
THR
4
A
GLU
5
A
GLU
5
A
TYR
10
A
TYR
10
A
VAL
11
A
VAL
11
A
TYR
178
A
TYR
178
A
GLU
181
A
GLU
181
A
SER
186
A
SER
186
A
ILE
189
A
ILE
189
B
THR
4
B
THR
4
B
GLU
5
B
GLU
5
B
TYR
10
B
TYR
10
B
VAL
11
B
VAL
11
B
TYR
178
B
TYR
178
B
GLU
181
B
GLU
181
B
SER
186
B
SER
186
B
ILE
189
B
ILE
189
76
P 41