1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Berjanskii, M.V. Riley, M.I. Xie, A. Semenchenko, V. Folk, W.R. Van Doren, S.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 275 36094 36103 10.1074/jbc.M006572200 10950962 NMR structure of the N-terminal J domain of murine polyomavirus T antigens. Implications for DnaJ-like domains and for mutations of T antigens. 2000 10.2210/pdb1faf/pdb pdb_00001faf 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9175.588 LARGE T ANTIGEN N-TERMINAL DOMAIN 1 man polymer no no MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Polyomavirus Escherichia sample 10634 Murine polyomavirus 562 Escherichia coli PLASMID PET15B database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2000-11-22 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y RCSB 2000-07-13 REL REL STRUCTURES WITH FAVORABLE NON-BOND ENERGY,STRUCTURES WITH THE LOWEST ENERGY 100 47 3D_15N-SEPARATED_NOESY- HSQC 100MS MIXING 3D_ 13C-SEPARATED_FSCT-HSMQC -NOESY 100MS MIXING 3D_13C-SEPARATED_NOESY- HMQC 100MS MIXING 3D_ 13C-SEPARATED_NOESY- CTHSQC 200MS MIXING HNCA-J HACAHB-COSY HNHB H-D EXCHANGE DETECTED BY 15N HSQC 25mM_PHOSPHATE/100mM_KCL 6.00 1 atm 303.00 K TORSION ANGLE DYNAMICS AND SIMULATED ANNEALING IN CARTESIAN SPACE 12 1.7 MM PYJ U-15N; 25 MM PHOSPHATE BUFFER, 100MM KCL structure solution XwinNMR 1.3 structure solution SYBYL TRIAD 6.3 structure solution CNS 1.0 refinement CNS 1.0 500 Bruker DRX MET 1 n 1 MET 1 A ASP 2 n 2 ASP 2 A ARG 3 n 3 ARG 3 A VAL 4 n 4 VAL 4 A LEU 5 n 5 LEU 5 A SER 6 n 6 SER 6 A ARG 7 n 7 ARG 7 A ALA 8 n 8 ALA 8 A ASP 9 n 9 ASP 9 A LYS 10 n 10 LYS 10 A GLU 11 n 11 GLU 11 A ARG 12 n 12 ARG 12 A LEU 13 n 13 LEU 13 A LEU 14 n 14 LEU 14 A GLU 15 n 15 GLU 15 A LEU 16 n 16 LEU 16 A LEU 17 n 17 LEU 17 A LYS 18 n 18 LYS 18 A LEU 19 n 19 LEU 19 A PRO 20 n 20 PRO 20 A ARG 21 n 21 ARG 21 A GLN 22 n 22 GLN 22 A LEU 23 n 23 LEU 23 A TRP 24 n 24 TRP 24 A GLY 25 n 25 GLY 25 A ASP 26 n 26 ASP 26 A PHE 27 n 27 PHE 27 A GLY 28 n 28 GLY 28 A ARG 29 n 29 ARG 29 A MET 30 n 30 MET 30 A GLN 31 n 31 GLN 31 A GLN 32 n 32 GLN 32 A ALA 33 n 33 ALA 33 A TYR 34 n 34 TYR 34 A LYS 35 n 35 LYS 35 A GLN 36 n 36 GLN 36 A GLN 37 n 37 GLN 37 A SER 38 n 38 SER 38 A LEU 39 n 39 LEU 39 A LEU 40 n 40 LEU 40 A LEU 41 n 41 LEU 41 A HIS 42 n 42 HIS 42 A PRO 43 n 43 PRO 43 A ASP 44 n 44 ASP 44 A LYS 45 n 45 LYS 45 A GLY 46 n 46 GLY 46 A GLY 47 n 47 GLY 47 A SER 48 n 48 SER 48 A HIS 49 n 49 HIS 49 A ALA 50 n 50 ALA 50 A LEU 51 n 51 LEU 51 A MET 52 n 52 MET 52 A GLN 53 n 53 GLN 53 A GLU 54 n 54 GLU 54 A LEU 55 n 55 LEU 55 A ASN 56 n 56 ASN 56 A SER 57 n 57 SER 57 A LEU 58 n 58 LEU 58 A TRP 59 n 59 TRP 59 A GLY 60 n 60 GLY 60 A THR 61 n 61 THR 61 A PHE 62 n 62 PHE 62 A LYS 63 n 63 LYS 63 A THR 64 n 64 THR 64 A GLU 65 n 65 GLU 65 A VAL 66 n 66 VAL 66 A TYR 67 n 67 TYR 67 A ASN 68 n 68 ASN 68 A LEU 69 n 69 LEU 69 A ARG 70 n 70 ARG 70 A MET 71 n 71 MET 71 A ASN 72 n 72 ASN 72 A LEU 73 n 73 LEU 73 A GLY 74 n 74 GLY 74 A GLY 75 n 75 GLY 75 A THR 76 n 76 THR 76 A GLY 77 n 77 GLY 77 A PHE 78 n 78 PHE 78 A GLN 79 n 79 GLN 79 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A LYS 18 54.25 19.26 1 A PRO 20 -46.83 167.21 1 A TRP 24 -55.69 108.31 2 A ASP 2 -129.71 -64.91 2 A PRO 20 -46.06 167.03 2 A TRP 24 -56.05 97.58 2 A ASN 72 -101.41 -73.24 3 A LYS 18 55.55 19.44 3 A TRP 24 -55.01 105.81 3 A ASN 72 -60.02 99.42 4 A ASP 2 -66.11 -174.02 4 A LYS 18 56.03 19.20 4 A TRP 24 -55.38 106.21 4 A PRO 43 -58.03 -2.92 5 A ASP 2 -67.72 -169.07 5 A LYS 18 53.94 19.66 5 A PRO 20 -49.60 168.83 5 A TRP 24 -58.24 89.04 5 A LEU 73 -128.19 -63.16 6 A PRO 20 -49.41 170.73 6 A TRP 24 -52.31 101.15 6 A PRO 43 -47.89 -12.91 6 A ASN 72 -92.67 37.62 7 A ARG 3 -100.33 77.90 7 A PRO 20 -45.41 166.55 7 A MET 71 -124.34 -62.34 8 A LYS 18 55.31 19.77 8 A PRO 20 -45.95 167.74 8 A TRP 24 -52.94 97.96 8 A ASN 72 -93.13 -71.90 8 A LEU 73 -94.78 -70.80 9 A LYS 18 53.12 19.98 9 A PRO 20 -45.48 164.43 9 A TRP 24 -51.59 100.69 10 A LYS 18 53.12 19.98 10 A PRO 20 -45.48 164.43 10 A TRP 24 -51.59 100.69 11 A PRO 20 -46.38 167.05 11 A TRP 24 -55.68 92.50 11 A ARG 70 -68.51 0.91 12 A LYS 18 54.15 19.70 12 A PRO 20 -49.43 169.69 12 A TRP 24 -57.60 97.75 13 A LYS 18 55.00 18.52 13 A PRO 20 -46.70 -176.40 13 A TRP 24 -53.65 92.63 13 A ASP 26 -57.28 97.51 13 A MET 71 -121.42 -52.76 13 A LEU 73 -142.00 -52.01 14 A LYS 18 48.98 21.25 14 A PRO 20 -48.37 167.40 14 A TRP 24 -52.08 109.60 14 A PRO 43 -46.69 -19.54 14 A ASN 72 -94.83 39.79 14 A LEU 73 -136.29 -73.48 15 A LYS 18 54.44 19.69 15 A PRO 20 -47.04 168.30 15 A TRP 24 -56.02 104.27 16 A LEU 73 -129.25 -67.01 17 A ASP 2 -64.55 -175.03 17 A ARG 3 -104.08 71.53 17 A LYS 18 55.22 19.35 17 A PRO 20 -45.53 167.60 17 A TRP 24 -56.47 97.40 17 A LEU 73 -93.38 39.42 18 A ASP 2 -125.50 -70.71 18 A LYS 18 55.78 19.07 18 A PRO 20 -47.02 166.85 18 A TRP 24 -55.63 96.47 19 A LYS 18 54.45 19.79 19 A PRO 20 -46.63 169.29 19 A TRP 24 -50.55 108.26 20 A PRO 20 -47.22 168.31 20 A TRP 24 -55.89 105.71 20 A ASN 72 -67.94 -171.71 21 A PRO 20 -47.99 167.92 21 A TRP 24 -53.74 96.79 22 A PRO 20 -48.72 169.11 22 A TRP 24 -50.66 99.71 22 A MET 71 -125.11 -60.61 23 A LYS 18 55.85 18.62 23 A PRO 20 -58.08 173.91 23 A TRP 24 -52.85 104.89 24 A ASP 2 -171.08 -41.63 24 A ARG 3 -115.67 77.20 24 A PRO 20 -47.16 168.00 24 A ASN 72 -101.21 -63.97 25 A LYS 18 53.96 18.05 25 A PRO 20 -50.81 -179.81 25 A TRP 24 -51.62 93.07 25 A ASP 26 -61.27 82.67 25 A THR 76 -124.10 -53.79 26 A PRO 20 -51.66 170.91 26 A TRP 24 -54.47 100.52 27 A PRO 20 -47.07 166.08 27 A TRP 24 -52.13 101.99 27 A ASN 72 -90.45 -73.00 28 A ASP 2 -143.39 -56.72 28 A PRO 20 -48.33 168.52 28 A LEU 73 -141.91 -38.39 29 A ASP 2 -143.39 -56.72 29 A PRO 20 -48.33 168.52 29 A LEU 73 -141.91 -38.39 30 A ARG 3 -106.27 75.72 30 A PRO 20 -49.26 174.34 30 A TRP 24 -53.88 90.31 30 A ASN 72 -60.63 93.69 31 A LYS 18 55.38 19.55 31 A PRO 20 -48.21 169.15 31 A TRP 24 -53.36 98.32 31 A LEU 73 -136.18 -57.04 32 A LYS 18 53.68 19.85 32 A PRO 20 -46.06 166.26 32 A TRP 24 -52.75 100.98 32 A LYS 45 -99.92 31.01 33 A ASP 2 -156.29 -36.75 33 A PRO 20 -47.53 168.17 33 A TRP 24 -51.88 97.19 33 A PRO 43 -45.61 -16.30 34 A LYS 18 54.40 19.05 34 A PRO 20 -46.19 168.24 35 A PRO 20 -43.98 166.92 35 A TRP 24 -52.60 100.46 36 A LYS 18 53.44 18.89 36 A PRO 20 -52.67 176.61 36 A ASP 26 -63.93 89.96 36 A LEU 73 -120.00 78.41 37 A LYS 18 52.93 19.07 37 A PRO 20 -52.25 170.81 37 A TRP 24 -49.37 100.85 37 A LEU 73 -123.94 -61.34 38 A LYS 18 55.19 19.10 38 A PRO 20 -47.21 169.91 38 A TRP 24 -52.93 102.44 38 A ASN 72 -97.53 -67.46 38 A LEU 73 -69.69 79.13 39 A LYS 18 53.93 19.50 39 A PRO 20 -46.48 166.07 39 A TRP 24 -54.84 98.37 39 A PHE 78 -89.97 31.52 40 A LYS 18 55.50 18.73 40 A PRO 20 -52.18 -179.48 40 A ASP 26 -58.72 93.84 40 A LYS 45 -99.14 30.33 40 A LEU 73 -97.63 41.68 41 A ASP 2 -128.00 -71.39 41 A LYS 18 55.31 19.11 41 A PRO 20 -39.92 165.02 41 A TRP 24 -44.68 98.29 42 A ASP 2 -62.41 -174.97 42 A PRO 20 -49.57 170.06 42 A TRP 24 -51.73 92.54 42 A LYS 45 -95.46 31.08 43 A ASP 2 -171.04 -64.80 43 A PRO 20 -48.88 165.08 43 A PHE 78 -57.95 179.95 44 A LYS 18 55.14 19.05 44 A PRO 20 -44.49 167.28 44 A TRP 24 -47.49 93.53 44 A LEU 73 -129.98 -67.35 45 A LYS 18 54.47 19.89 45 A PRO 20 -49.32 169.92 45 A ASN 72 -59.74 108.62 45 A LEU 73 -123.51 -58.77 46 A LYS 18 54.39 19.80 46 A PRO 20 -42.54 165.90 46 A TRP 24 -52.72 109.49 47 A LYS 18 55.63 19.01 47 A PRO 20 -46.55 169.39 47 A TRP 24 -54.87 92.37 47 A ASN 72 -101.54 -73.40 47 A LEU 73 -89.85 36.47 NMR STRUCTURE OF THE N-TERMINAL J DOMAIN OF MURINE POLYOMAVIRUS T ANTIGENS. 1 N N A SER 6 A SER 6 HELX_P A LYS 18 A LYS 18 1 1 13 A ASP 26 A ASP 26 HELX_P A LEU 41 A LEU 41 1 2 16 A HIS 42 A HIS 42 HELX_P A GLY 46 A GLY 46 5 3 5 A SER 48 A SER 48 HELX_P A ARG 70 A ARG 70 1 4 23 VIRAL PROTEIN J DOMAIN, HPD MOTIF, ANTI-PARALLEL HAIRPIN OF HELICES, Viral protein TALA_POVM3 UNP 1 1 P03074 MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQG SPPRTAERGTEESGHSPLHDDYWSFSYGSKYFTREWNDFFRKWDPSYQSPPKTAESSEQPDLFCYEEPLLSPNPSSPTDT PAHTAGRRRNPCVAEPDDSISPDPPRTPVSRKRPRPAGATGGGGGGVHANGGSVFGHPTGGTSTPAHPPPYHSQGGSESM GGSDSSGFAEGSFRSDPRCESENESYSQSCSQSSFNATPPKKAREDPAPSDFPSSLTGYLSHAIYSNKTFPAFLVYSTKE KCKQLYDTIGKFRPEFKCLVHYEEGGMLFFLTMTKHRVSAVKNYCSKLCSVSFLMCKAVTKPMECYQVVTAAPFQLITEN KPGLHQFEFTDEPEEQKAVDWIMVADFALENNLDDPLLIMGYYLDFAKEVPSCIKCSKEETRLQIHWKNHRKHAENADLF LNCKAQKTICQQAADGVLASRRLKLVECTRSQLLKERLQQSLLRLKELGSSDALLYLAGVAWYQCLLEDFPQTLFKMLKL LTENVPKRRNILFRGPVNSGKTGLAAALISLLGGKSLNINCPADKLAFELGVAQDQFVVCFEDVKGQIALNKQLQPGMGV ANLDNLRDYLDTSVKVNLEKKHSNKRSQLFPPCVCTMNEYLLPQTVWARFHMVLDFTCKPHLAQSLEKCEFLQRERIIQS GDTLALLLIWNFTSDVFDPDIQGLVKEVRDQFASECSYSLFCDILCNVQEGDDPLKDICEYS 1 79 1FAF 1 79 P03074 A 1 1 79 1 P 1