0.013385
0.007728
0.000000
0.000000
0.015456
0.000000
0.000000
0.000000
0.013514
0.00000
0.00000
0.00000
Capitani, G.
Markovic-Housley, Z.
DelVal, G.
Morris, M.
Jansonius, J.N.
Schurmann, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
74.71
74.71
74.00
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
302
135
154
10.1006/jmbi.2000.4006
10964566
Crystal structures of two functionally different thioredoxins in spinach chloroplasts.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
IMAGE PLATE
1997-03-31
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ELLIOTT GX-20
11793.436
THIOREDOXIN M
OXIDIZED FORM
2
man
polymer
18.015
water
121
nat
water
no
no
EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK
NGERKESIIGAVPKSTLTDSIEKYL
EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK
NGERKESIIGAVPKSTLTDSIEKYL
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
spinach
Spinacia
Escherichia
sample
CHLOROPLAST
3562
Spinacia oleracea
562
Escherichia coli
PKK233-2 (MODIFIED)
1
2.53
51.31
VAPOR DIFFUSION, HANGING DROP
sodium acetate,
PEG monomethylether 2000,
ammonium sulphate, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-09-20
1
1
2008-04-27
1
2
2011-07-13
thioredoxin f from spinach chloroplast (short form)
thioredoxin f from spinach chloroplast (long form)
thioredoxin m from spinach chloroplast (reduced form)
RCSB
Y
RCSB
2000-07-14
REL
REL
HOH
water
HOH
3
2
HOH
HOH
113
A
HOH
5
2
HOH
HOH
114
A
HOH
6
2
HOH
HOH
115
A
HOH
8
2
HOH
HOH
116
A
HOH
9
2
HOH
HOH
117
A
HOH
11
2
HOH
HOH
118
A
HOH
13
2
HOH
HOH
119
A
HOH
14
2
HOH
HOH
120
A
HOH
16
2
HOH
HOH
121
A
HOH
17
2
HOH
HOH
122
A
HOH
18
2
HOH
HOH
123
A
HOH
20
2
HOH
HOH
124
A
HOH
21
2
HOH
HOH
125
A
HOH
23
2
HOH
HOH
126
A
HOH
30
2
HOH
HOH
127
A
HOH
32
2
HOH
HOH
128
A
HOH
33
2
HOH
HOH
129
A
HOH
35
2
HOH
HOH
130
A
HOH
37
2
HOH
HOH
131
A
HOH
38
2
HOH
HOH
132
A
HOH
41
2
HOH
HOH
133
A
HOH
42
2
HOH
HOH
134
A
HOH
44
2
HOH
HOH
135
A
HOH
45
2
HOH
HOH
136
A
HOH
46
2
HOH
HOH
137
A
HOH
48
2
HOH
HOH
138
A
HOH
52
2
HOH
HOH
139
A
HOH
64
2
HOH
HOH
140
A
HOH
65
2
HOH
HOH
141
A
HOH
67
2
HOH
HOH
142
A
HOH
70
2
HOH
HOH
143
A
HOH
71
2
HOH
HOH
144
A
HOH
73
2
HOH
HOH
145
A
HOH
74
2
HOH
HOH
146
A
HOH
77
2
HOH
HOH
147
A
HOH
79
2
HOH
HOH
148
A
HOH
85
2
HOH
HOH
149
A
HOH
87
2
HOH
HOH
150
A
HOH
88
2
HOH
HOH
151
A
HOH
89
2
HOH
HOH
152
A
HOH
90
2
HOH
HOH
153
A
HOH
96
2
HOH
HOH
154
A
HOH
106
2
HOH
HOH
155
A
HOH
107
2
HOH
HOH
156
A
HOH
108
2
HOH
HOH
157
A
HOH
109
2
HOH
HOH
158
A
HOH
110
2
HOH
HOH
159
A
HOH
114
2
HOH
HOH
160
A
HOH
118
2
HOH
HOH
161
A
HOH
121
2
HOH
HOH
162
A
HOH
125
2
HOH
HOH
163
A
HOH
130
2
HOH
HOH
164
A
HOH
137
2
HOH
HOH
165
A
HOH
139
2
HOH
HOH
166
A
HOH
141
2
HOH
HOH
167
A
HOH
4
2
HOH
HOH
113
B
HOH
15
2
HOH
HOH
114
B
HOH
19
2
HOH
HOH
115
B
HOH
22
2
HOH
HOH
116
B
HOH
31
2
HOH
HOH
117
B
HOH
34
2
HOH
HOH
118
B
HOH
36
2
HOH
HOH
119
B
HOH
39
2
HOH
HOH
120
B
HOH
40
2
HOH
HOH
121
B
HOH
43
2
HOH
HOH
122
B
HOH
47
2
HOH
HOH
123
B
HOH
49
2
HOH
HOH
124
B
HOH
50
2
HOH
HOH
125
B
HOH
51
2
HOH
HOH
126
B
HOH
53
2
HOH
HOH
127
B
HOH
54
2
HOH
HOH
128
B
HOH
55
2
HOH
HOH
129
B
HOH
56
2
HOH
HOH
130
B
HOH
57
2
HOH
HOH
131
B
HOH
58
2
HOH
HOH
132
B
HOH
59
2
HOH
HOH
133
B
HOH
61
2
HOH
HOH
134
B
HOH
62
2
HOH
HOH
135
B
HOH
63
2
HOH
HOH
136
B
HOH
68
2
HOH
HOH
137
B
HOH
69
2
HOH
HOH
138
B
HOH
75
2
HOH
HOH
139
B
HOH
76
2
HOH
HOH
140
B
HOH
78
2
HOH
HOH
141
B
HOH
80
2
HOH
HOH
142
B
HOH
81
2
HOH
HOH
143
B
HOH
82
2
HOH
HOH
144
B
HOH
83
2
HOH
HOH
145
B
HOH
86
2
HOH
HOH
146
B
HOH
91
2
HOH
HOH
147
B
HOH
94
2
HOH
HOH
148
B
HOH
95
2
HOH
HOH
149
B
HOH
97
2
HOH
HOH
150
B
HOH
98
2
HOH
HOH
151
B
HOH
99
2
HOH
HOH
152
B
HOH
101
2
HOH
HOH
153
B
HOH
102
2
HOH
HOH
154
B
HOH
103
2
HOH
HOH
155
B
HOH
105
2
HOH
HOH
156
B
HOH
111
2
HOH
HOH
157
B
HOH
112
2
HOH
HOH
158
B
HOH
113
2
HOH
HOH
159
B
HOH
115
2
HOH
HOH
160
B
HOH
116
2
HOH
HOH
161
B
HOH
117
2
HOH
HOH
162
B
HOH
119
2
HOH
HOH
163
B
HOH
120
2
HOH
HOH
164
B
HOH
122
2
HOH
HOH
165
B
HOH
123
2
HOH
HOH
166
B
HOH
124
2
HOH
HOH
167
B
HOH
126
2
HOH
HOH
168
B
HOH
127
2
HOH
HOH
169
B
HOH
128
2
HOH
HOH
170
B
HOH
129
2
HOH
HOH
171
B
HOH
131
2
HOH
HOH
172
B
HOH
132
2
HOH
HOH
173
B
HOH
133
2
HOH
HOH
174
B
HOH
136
2
HOH
HOH
175
B
HOH
138
2
HOH
HOH
176
B
HOH
140
2
HOH
HOH
177
B
HOH
142
2
HOH
HOH
178
B
n
1
8
A
VAL
9
n
2
VAL
9
A
GLN
10
n
3
GLN
10
A
ASP
11
n
4
ASP
11
A
VAL
12
n
5
VAL
12
A
ASN
13
n
6
ASN
13
A
ASP
14
n
7
ASP
14
A
SER
15
n
8
SER
15
A
SER
16
n
9
SER
16
A
TRP
17
n
10
TRP
17
A
LYS
18
n
11
LYS
18
A
GLU
19
n
12
GLU
19
A
PHE
20
n
13
PHE
20
A
VAL
21
n
14
VAL
21
A
LEU
22
n
15
LEU
22
A
GLU
23
n
16
GLU
23
A
SER
24
n
17
SER
24
A
GLU
25
n
18
GLU
25
A
VAL
26
n
19
VAL
26
A
PRO
27
n
20
PRO
27
A
VAL
28
n
21
VAL
28
A
MET
29
n
22
MET
29
A
VAL
30
n
23
VAL
30
A
ASP
31
n
24
ASP
31
A
PHE
32
n
25
PHE
32
A
TRP
33
n
26
TRP
33
A
ALA
34
n
27
ALA
34
A
PRO
35
n
28
PRO
35
A
TRP
36
n
29
TRP
36
A
CYS
37
n
30
CYS
37
A
GLY
38
n
31
GLY
38
A
PRO
39
n
32
PRO
39
A
CYS
40
n
33
CYS
40
A
LYS
41
n
34
LYS
41
A
LEU
42
n
35
LEU
42
A
ILE
43
n
36
ILE
43
A
ALA
44
n
37
ALA
44
A
PRO
45
n
38
PRO
45
A
VAL
46
n
39
VAL
46
A
ILE
47
n
40
ILE
47
A
ASP
48
n
41
ASP
48
A
GLU
49
n
42
GLU
49
A
LEU
50
n
43
LEU
50
A
ALA
51
n
44
ALA
51
A
LYS
52
n
45
LYS
52
A
GLU
53
n
46
GLU
53
A
TYR
54
n
47
TYR
54
A
SER
55
n
48
SER
55
A
GLY
56
n
49
GLY
56
A
LYS
57
n
50
LYS
57
A
ILE
58
n
51
ILE
58
A
ALA
59
n
52
ALA
59
A
VAL
60
n
53
VAL
60
A
TYR
61
n
54
TYR
61
A
LYS
62
n
55
LYS
62
A
LEU
63
n
56
LEU
63
A
ASN
64
n
57
ASN
64
A
THR
65
n
58
THR
65
A
ASP
66
n
59
ASP
66
A
GLU
67
n
60
GLU
67
A
ALA
68
n
61
ALA
68
A
PRO
69
n
62
PRO
69
A
GLY
70
n
63
GLY
70
A
ILE
71
n
64
ILE
71
A
ALA
72
n
65
ALA
72
A
THR
73
n
66
THR
73
A
GLN
74
n
67
GLN
74
A
TYR
75
n
68
TYR
75
A
ASN
76
n
69
ASN
76
A
ILE
77
n
70
ILE
77
A
ARG
78
n
71
ARG
78
A
SER
79
n
72
SER
79
A
ILE
80
n
73
ILE
80
A
PRO
81
n
74
PRO
81
A
THR
82
n
75
THR
82
A
VAL
83
n
76
VAL
83
A
LEU
84
n
77
LEU
84
A
PHE
85
n
78
PHE
85
A
PHE
86
n
79
PHE
86
A
LYS
87
n
80
LYS
87
A
ASN
88
n
81
ASN
88
A
GLY
89
n
82
GLY
89
A
GLU
90
n
83
GLU
90
A
ARG
91
n
84
ARG
91
A
LYS
92
n
85
LYS
92
A
GLU
93
n
86
GLU
93
A
SER
94
n
87
SER
94
A
ILE
95
n
88
ILE
95
A
ILE
96
n
89
ILE
96
A
GLY
97
n
90
GLY
97
A
ALA
98
n
91
ALA
98
A
VAL
99
n
92
VAL
99
A
PRO
100
n
93
PRO
100
A
LYS
101
n
94
LYS
101
A
SER
102
n
95
SER
102
A
THR
103
n
96
THR
103
A
LEU
104
n
97
LEU
104
A
THR
105
n
98
THR
105
A
ASP
106
n
99
ASP
106
A
SER
107
n
100
SER
107
A
ILE
108
n
101
ILE
108
A
GLU
109
n
102
GLU
109
A
LYS
110
n
103
LYS
110
A
TYR
111
n
104
TYR
111
A
LEU
112
n
105
LEU
112
A
n
1
8
B
VAL
9
n
2
VAL
9
B
GLN
10
n
3
GLN
10
B
ASP
11
n
4
ASP
11
B
VAL
12
n
5
VAL
12
B
ASN
13
n
6
ASN
13
B
ASP
14
n
7
ASP
14
B
SER
15
n
8
SER
15
B
SER
16
n
9
SER
16
B
TRP
17
n
10
TRP
17
B
LYS
18
n
11
LYS
18
B
GLU
19
n
12
GLU
19
B
PHE
20
n
13
PHE
20
B
VAL
21
n
14
VAL
21
B
LEU
22
n
15
LEU
22
B
GLU
23
n
16
GLU
23
B
SER
24
n
17
SER
24
B
GLU
25
n
18
GLU
25
B
VAL
26
n
19
VAL
26
B
PRO
27
n
20
PRO
27
B
VAL
28
n
21
VAL
28
B
MET
29
n
22
MET
29
B
VAL
30
n
23
VAL
30
B
ASP
31
n
24
ASP
31
B
PHE
32
n
25
PHE
32
B
TRP
33
n
26
TRP
33
B
ALA
34
n
27
ALA
34
B
PRO
35
n
28
PRO
35
B
TRP
36
n
29
TRP
36
B
CYS
37
n
30
CYS
37
B
GLY
38
n
31
GLY
38
B
PRO
39
n
32
PRO
39
B
CYS
40
n
33
CYS
40
B
LYS
41
n
34
LYS
41
B
LEU
42
n
35
LEU
42
B
ILE
43
n
36
ILE
43
B
ALA
44
n
37
ALA
44
B
PRO
45
n
38
PRO
45
B
VAL
46
n
39
VAL
46
B
ILE
47
n
40
ILE
47
B
ASP
48
n
41
ASP
48
B
GLU
49
n
42
GLU
49
B
LEU
50
n
43
LEU
50
B
ALA
51
n
44
ALA
51
B
LYS
52
n
45
LYS
52
B
GLU
53
n
46
GLU
53
B
TYR
54
n
47
TYR
54
B
SER
55
n
48
SER
55
B
GLY
56
n
49
GLY
56
B
LYS
57
n
50
LYS
57
B
ILE
58
n
51
ILE
58
B
ALA
59
n
52
ALA
59
B
VAL
60
n
53
VAL
60
B
TYR
61
n
54
TYR
61
B
LYS
62
n
55
LYS
62
B
LEU
63
n
56
LEU
63
B
ASN
64
n
57
ASN
64
B
THR
65
n
58
THR
65
B
ASP
66
n
59
ASP
66
B
GLU
67
n
60
GLU
67
B
ALA
68
n
61
ALA
68
B
PRO
69
n
62
PRO
69
B
GLY
70
n
63
GLY
70
B
ILE
71
n
64
ILE
71
B
ALA
72
n
65
ALA
72
B
THR
73
n
66
THR
73
B
GLN
74
n
67
GLN
74
B
TYR
75
n
68
TYR
75
B
ASN
76
n
69
ASN
76
B
ILE
77
n
70
ILE
77
B
ARG
78
n
71
ARG
78
B
SER
79
n
72
SER
79
B
ILE
80
n
73
ILE
80
B
PRO
81
n
74
PRO
81
B
THR
82
n
75
THR
82
B
VAL
83
n
76
VAL
83
B
LEU
84
n
77
LEU
84
B
PHE
85
n
78
PHE
85
B
PHE
86
n
79
PHE
86
B
LYS
87
n
80
LYS
87
B
ASN
88
n
81
ASN
88
B
GLY
89
n
82
GLY
89
B
GLU
90
n
83
GLU
90
B
ARG
91
n
84
ARG
91
B
LYS
92
n
85
LYS
92
B
GLU
93
n
86
GLU
93
B
SER
94
n
87
SER
94
B
ILE
95
n
88
ILE
95
B
ILE
96
n
89
ILE
96
B
GLY
97
n
90
GLY
97
B
ALA
98
n
91
ALA
98
B
VAL
99
n
92
VAL
99
B
PRO
100
n
93
PRO
100
B
LYS
101
n
94
LYS
101
B
SER
102
n
95
SER
102
B
THR
103
n
96
THR
103
B
LEU
104
n
97
LEU
104
B
THR
105
n
98
THR
105
B
ASP
106
n
99
ASP
106
B
SER
107
n
100
SER
107
B
ILE
108
n
101
ILE
108
B
GLU
109
n
102
GLU
109
B
LYS
110
n
103
LYS
110
B
TYR
111
n
104
TYR
111
B
LEU
112
n
105
LEU
112
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
10
A
N
GLN
3
A
O
VAL
60
A
O
VAL
53
A
O
ALA
59
A
O
ALA
52
A
N
MET
29
A
N
MET
22
A
N
PHE
32
A
N
PHE
25
A
O
THR
82
A
O
THR
75
A
N
LYS
87
A
N
LYS
80
A
O
GLU
90
A
O
GLU
83
A
N
ILE
96
A
N
ILE
89
B
O
SER
94
B
O
SER
87
B
N
ILE
95
B
N
ILE
88
B
O
VAL
83
B
O
VAL
76
B
O
PHE
86
B
O
PHE
79
B
N
VAL
28
B
N
VAL
21
B
N
MET
29
B
N
MET
22
B
O
ALA
59
B
O
ALA
52
B
N
LYS
62
B
N
LYS
55
B
O
GLN
10
B
O
GLN
3
1
A
GLU
8
A
GLU
1
1
Y
1
B
GLU
8
B
GLU
1
1
Y
1
B
VAL
21
-93.90
-60.52
Used overall anisotropic B-factor
refinement and bulk solvent correction
(X-PLOR 3.851 and CNS)
0.23
0.204
2.1
29.6
542
14256
99.3
RANDOM
1
0.0
Engh & Huber
2.1
29.6
121
1765
0
0
1644
0.006
1.2
23.5
0.80
24.0
2.1
29.6
1FB6
14256
-3.0
0.086
1
10.2
8.5
99.3
0.396
2.10
2.15
7.4
92.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
3.851
THIOREDOXIN M
CRYSTAL STRUCTURE OF THIOREDOXIN M FROM SPINACH CHLOROPLAST (OXIDIZED FORM)
1
N
N
1
N
N
2
N
N
2
N
N
The biological assembly is a
monomer
A
SER
16
A
SER
9
HELX_P
A
VAL
21
A
VAL
14
1
1
6
A
CYS
37
A
CYS
30
HELX_P
A
TYR
54
A
TYR
47
1
2
18
A
ALA
68
A
ALA
61
HELX_P
A
TYR
75
A
TYR
68
1
3
8
A
PRO
100
A
PRO
93
HELX_P
A
LEU
112
A
LEU
105
1
4
13
B
SER
16
B
SER
9
HELX_P
B
VAL
21
B
VAL
14
1
5
6
B
PRO
39
B
PRO
32
HELX_P
B
TYR
54
B
TYR
47
1
6
16
B
ALA
68
B
ALA
61
HELX_P
B
TYR
75
B
TYR
68
1
7
8
B
PRO
100
B
PRO
93
HELX_P
B
TYR
111
B
TYR
104
1
8
12
disulf
2.028
A
CYS
37
A
SG
CYS
30
1_555
A
CYS
40
A
SG
CYS
33
1_555
disulf
2.029
B
CYS
37
B
SG
CYS
30
1_555
B
CYS
40
B
SG
CYS
33
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT
A
ILE
80
A
ILE
73
1
A
PRO
81
A
PRO
74
0.05
B
ILE
80
B
ILE
73
1
B
PRO
81
B
PRO
74
0.12
TRXM_SPIOL
UNP
1
75
P07591
EVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFK
NGERKESIIGAVPKSTLTDSIEKYL
75
179
1FB6
8
112
P07591
A
1
1
105
75
179
1FB6
8
112
P07591
B
1
1
105
10
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
A
GLN
10
A
GLN
3
A
ASP
11
A
ASP
4
A
ALA
59
A
ALA
52
A
ASN
64
A
ASN
57
A
VAL
28
A
VAL
21
A
TRP
33
A
TRP
26
A
THR
82
A
THR
75
A
LYS
87
A
LYS
80
A
GLU
90
A
GLU
83
A
GLY
97
A
GLY
90
B
GLU
90
B
GLU
83
B
ILE
96
B
ILE
89
B
THR
82
B
THR
75
B
LYS
87
B
LYS
80
B
VAL
28
B
VAL
21
B
TRP
33
B
TRP
26
B
ALA
59
B
ALA
52
B
ASN
64
B
ASN
57
B
GLN
10
B
GLN
3
B
ASP
11
B
ASP
4
152
P 31 2 1