.012438 0.000000 0.000000 0.000000 .006831 0.000000 0.000000 0.000000 .019841 0.00000 0.00000 0.00000 THESE ATOMS WERE NOT FOUND IN THE ELECTRON DENSITY MAP. THEIR COORDINATES WERE GENERATED USING STEREOCHEMICAL CRITERIA RESIDUE 374 OF EACH CHAIN IS A CIS-PROLINE. Deisenhofer, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 80.400 146.400 50.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O5 164.156 alpha-L-fucopyranose L-saccharide, alpha linking C6 H12 O6 180.156 beta-D-galactopyranose D-saccharide, beta linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 20 2361 2370 10.1021/bi00512a001 7236608 Crystallographic refinement and atomic models of a human Fc fragment and its complex with fragment B of protein A from Staphylococcus aureus at 2.9- and 2.8-A resolution. 1981 GW Hoppe-Seyler's Z.Physiol.Chem. HSZPAZ 0905 0018-4888 357 1421 Crystallographic Structural Studies of a Human Fc Fragment. II. A Complete Model Based on a Fourier Map at 3.5 Angstroms Resolution 1976 GW Hoppe-Seyler's Z.Physiol.Chem. HSZPAZ 0905 0018-4888 357 435 Crystallographic Structural Studies of a Human Fc-Fragment. I. An Electron-Density Map at 4 Angstroms Resolution and a Partial Model 1976 NE FEBS Lett. FEBLAL 0165 0014-5793 44 194 X-Ray Studies on Antibody Fragments 1974 MAN C 3 HAS WRONG CHIRALITY AT ATOM C1 FUC C 9 HAS WRONG CHIRALITY AT ATOM C1 FUC C 9 HAS WRONG CHIRALITY AT ATOM C5 MAN D 3 HAS WRONG CHIRALITY AT ATOM C1 FUC D 9 HAS WRONG CHIRALITY AT ATOM C1 FUC D 9 HAS WRONG CHIRALITY AT ATOM C5 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 25236.615 FC FRAGMENT 2 man polymer 1625.490 beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 2 man branched no no THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRV VSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWE SNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG THTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRV VSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWE SNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human SERUM sample 9606 Homo sapiens 2.94 58.10 atom_site chem_comp database_PDB_caveat entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_unobs_or_zero_occ_atoms pdbx_unobs_or_zero_occ_residues pdbx_validate_chiral struct_asym struct_conn struct_ref_seq_dif struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Advisory Atomic model Data collection Database references Derived calculations Other Structure summary 1 0 1981-10-02 1 1 2008-03-24 1 2 2011-07-13 2 0 2020-07-29 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.occupancy _atom_site.type_symbol _chem_comp.name _chem_comp.type _pdbx_database_status.process_site _pdbx_struct_assembly_gen.asym_id_list _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_ref_seq_dif.details A NAG 1 n C NAG 1 A NAG 3 n C NAG 2 A MAN 4 n C MAN 3 A MAN 5 n C MAN 4 A NAG 6 n C NAG 5 A GAL 7 n C GAL 6 A MAN 8 n C MAN 7 A NAG 9 n C NAG 8 A FUC 2 n C FUC 9 B NAG 1 n D NAG 1 B NAG 3 n D NAG 2 B MAN 4 n D MAN 3 B MAN 5 n D MAN 4 B NAG 6 n D NAG 5 B GAL 7 n D GAL 6 B MAN 8 n D MAN 7 B NAG 9 n D NAG 8 B FUC 2 n D FUC 9 LFucpa a-L-fucopyranose a-L-Fucp Fuc DGalpb b-D-galactopyranose b-D-Galp Gal DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc Y BNL 1981-05-21 REL oligosaccharide DGalpb1-4DGlcpNAcb1-2DManpa1-6[DGlcpNAcb1-2DManpa1-3]DManpa1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1- 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/4,9,8/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-1-2-2-1-2-1-3-4/a4-b1_a6-i1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1_g4-h1 2 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{[(4+1)][b-D-Galp]{}}}}}[(6+1)][a-D-6-deoxy-Altp]{}}} 2 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 MAN NAG 3 2 2 O1 HO4 sing C1 O6 MAN MAN 4 3 2 O1 HO6 sing C1 O2 NAG MAN 5 4 2 O1 HO2 sing C1 O4 GAL NAG 6 5 2 O1 HO4 sing C1 O3 MAN MAN 7 3 2 O1 HO3 sing C1 O2 NAG MAN 8 7 2 O1 HO2 sing C1 O6 FUC NAG 9 1 2 O1 HO6 sing n n n n n n n n n n 1 223 A n 2 224 A n 3 225 A n 4 226 A n 5 227 A n 6 228 A n 7 229 A n 8 230 A n 9 231 A n 10 232 A n 11 233 A n 12 234 A n 13 235 A n 14 236 A n 15 237 A PRO 238 n 16 PRO 238 A SER 239 n 17 SER 239 A VAL 240 n 18 VAL 240 A PHE 241 n 19 PHE 241 A LEU 242 n 20 LEU 242 A PHE 243 n 21 PHE 243 A PRO 244 n 22 PRO 244 A PRO 245 n 23 PRO 245 A LYS 246 n 24 LYS 246 A PRO 247 n 25 PRO 247 A LYS 248 n 26 LYS 248 A ASP 249 n 27 ASP 249 A THR 250 n 28 THR 250 A LEU 251 n 29 LEU 251 A MET 252 n 30 MET 252 A ILE 253 n 31 ILE 253 A SER 254 n 32 SER 254 A ARG 255 n 33 ARG 255 A THR 256 n 34 THR 256 A PRO 257 n 35 PRO 257 A GLU 258 n 36 GLU 258 A VAL 259 n 37 VAL 259 A THR 260 n 38 THR 260 A CYS 261 n 39 CYS 261 A VAL 262 n 40 VAL 262 A VAL 263 n 41 VAL 263 A VAL 264 n 42 VAL 264 A ASP 265 n 43 ASP 265 A VAL 266 n 44 VAL 266 A SER 267 n 45 SER 267 A HIS 268 n 46 HIS 268 A GLU 269 n 47 GLU 269 A ASP 270 n 48 ASP 270 A PRO 271 n 49 PRO 271 A GLN 272 n 50 GLN 272 A VAL 273 n 51 VAL 273 A LYS 274 n 52 LYS 274 A PHE 275 n 53 PHE 275 A ASN 276 n 54 ASN 276 A TRP 277 n 55 TRP 277 A TYR 278 n 56 TYR 278 A VAL 279 n 57 VAL 279 A ASP 280 n 58 ASP 280 A GLY 281 n 59 GLY 281 A VAL 282 n 60 VAL 282 A GLN 283 n 61 GLN 283 A VAL 284 n 62 VAL 284 A HIS 285 n 63 HIS 285 A ASN 286 n 64 ASN 286 A ALA 287 n 65 ALA 287 A LYS 288 n 66 LYS 288 A THR 289 n 67 THR 289 A LYS 290 n 68 LYS 290 A PRO 291 n 69 PRO 291 A ARG 292 n 70 ARG 292 A GLU 293 n 71 GLU 293 A GLN 294 n 72 GLN 294 A GLN 295 n 73 GLN 295 A TYR 296 n 74 TYR 296 A ASN 297 n 75 ASN 297 A SER 298 n 76 SER 298 A THR 299 n 77 THR 299 A TYR 300 n 78 TYR 300 A ARG 301 n 79 ARG 301 A VAL 302 n 80 VAL 302 A VAL 303 n 81 VAL 303 A SER 304 n 82 SER 304 A VAL 305 n 83 VAL 305 A LEU 306 n 84 LEU 306 A THR 307 n 85 THR 307 A VAL 308 n 86 VAL 308 A LEU 309 n 87 LEU 309 A HIS 310 n 88 HIS 310 A GLN 311 n 89 GLN 311 A ASN 312 n 90 ASN 312 A TRP 313 n 91 TRP 313 A LEU 314 n 92 LEU 314 A ASP 315 n 93 ASP 315 A GLY 316 n 94 GLY 316 A LYS 317 n 95 LYS 317 A GLU 318 n 96 GLU 318 A TYR 319 n 97 TYR 319 A LYS 320 n 98 LYS 320 A CYS 321 n 99 CYS 321 A LYS 322 n 100 LYS 322 A VAL 323 n 101 VAL 323 A SER 324 n 102 SER 324 A ASN 325 n 103 ASN 325 A LYS 326 n 104 LYS 326 A ALA 327 n 105 ALA 327 A LEU 328 n 106 LEU 328 A PRO 329 n 107 PRO 329 A ALA 330 n 108 ALA 330 A PRO 331 n 109 PRO 331 A ILE 332 n 110 ILE 332 A GLU 333 n 111 GLU 333 A LYS 334 n 112 LYS 334 A THR 335 n 113 THR 335 A ILE 336 n 114 ILE 336 A SER 337 n 115 SER 337 A LYS 338 n 116 LYS 338 A ALA 339 n 117 ALA 339 A LYS 340 n 118 LYS 340 A GLY 341 n 119 GLY 341 A GLN 342 n 120 GLN 342 A PRO 343 n 121 PRO 343 A ARG 344 n 122 ARG 344 A GLU 345 n 123 GLU 345 A PRO 346 n 124 PRO 346 A GLN 347 n 125 GLN 347 A VAL 348 n 126 VAL 348 A TYR 349 n 127 TYR 349 A THR 350 n 128 THR 350 A LEU 351 n 129 LEU 351 A PRO 352 n 130 PRO 352 A PRO 353 n 131 PRO 353 A SER 354 n 132 SER 354 A ARG 355 n 133 ARG 355 A GLU 356 n 134 GLU 356 A GLU 357 n 135 GLU 357 A MET 358 n 136 MET 358 A THR 359 n 137 THR 359 A LYS 360 n 138 LYS 360 A ASN 361 n 139 ASN 361 A GLN 362 n 140 GLN 362 A VAL 363 n 141 VAL 363 A SER 364 n 142 SER 364 A LEU 365 n 143 LEU 365 A THR 366 n 144 THR 366 A CYS 367 n 145 CYS 367 A LEU 368 n 146 LEU 368 A VAL 369 n 147 VAL 369 A LYS 370 n 148 LYS 370 A GLY 371 n 149 GLY 371 A PHE 372 n 150 PHE 372 A TYR 373 n 151 TYR 373 A PRO 374 n 152 PRO 374 A SER 375 n 153 SER 375 A ASP 376 n 154 ASP 376 A ILE 377 n 155 ILE 377 A ALA 378 n 156 ALA 378 A VAL 379 n 157 VAL 379 A GLU 380 n 158 GLU 380 A TRP 381 n 159 TRP 381 A GLU 382 n 160 GLU 382 A SER 383 n 161 SER 383 A ASN 384 n 162 ASN 384 A GLY 385 n 163 GLY 385 A GLN 386 n 164 GLN 386 A PRO 387 n 165 PRO 387 A GLU 388 n 166 GLU 388 A ASN 389 n 167 ASN 389 A ASN 390 n 168 ASN 390 A TYR 391 n 169 TYR 391 A LYS 392 n 170 LYS 392 A THR 393 n 171 THR 393 A THR 394 n 172 THR 394 A PRO 395 n 173 PRO 395 A PRO 396 n 174 PRO 396 A VAL 397 n 175 VAL 397 A LEU 398 n 176 LEU 398 A ASP 399 n 177 ASP 399 A SER 400 n 178 SER 400 A ASP 401 n 179 ASP 401 A GLY 402 n 180 GLY 402 A SER 403 n 181 SER 403 A PHE 404 n 182 PHE 404 A PHE 405 n 183 PHE 405 A LEU 406 n 184 LEU 406 A TYR 407 n 185 TYR 407 A SER 408 n 186 SER 408 A LYS 409 n 187 LYS 409 A LEU 410 n 188 LEU 410 A THR 411 n 189 THR 411 A VAL 412 n 190 VAL 412 A ASP 413 n 191 ASP 413 A LYS 414 n 192 LYS 414 A SER 415 n 193 SER 415 A ARG 416 n 194 ARG 416 A TRP 417 n 195 TRP 417 A GLN 418 n 196 GLN 418 A GLN 419 n 197 GLN 419 A GLY 420 n 198 GLY 420 A ASN 421 n 199 ASN 421 A VAL 422 n 200 VAL 422 A PHE 423 n 201 PHE 423 A SER 424 n 202 SER 424 A CYS 425 n 203 CYS 425 A SER 426 n 204 SER 426 A VAL 427 n 205 VAL 427 A MET 428 n 206 MET 428 A HIS 429 n 207 HIS 429 A GLU 430 n 208 GLU 430 A ALA 431 n 209 ALA 431 A LEU 432 n 210 LEU 432 A HIS 433 n 211 HIS 433 A ASN 434 n 212 ASN 434 A HIS 435 n 213 HIS 435 A TYR 436 n 214 TYR 436 A THR 437 n 215 THR 437 A GLN 438 n 216 GLN 438 A LYS 439 n 217 LYS 439 A SER 440 n 218 SER 440 A LEU 441 n 219 LEU 441 A SER 442 n 220 SER 442 A LEU 443 n 221 LEU 443 A SER 444 n 222 SER 444 A n 223 445 A n 224 446 A n 1 223 B n 2 224 B n 3 225 B n 4 226 B n 5 227 B n 6 228 B n 7 229 B n 8 230 B n 9 231 B n 10 232 B n 11 233 B n 12 234 B n 13 235 B n 14 236 B n 15 237 B PRO 238 n 16 PRO 238 B SER 239 n 17 SER 239 B VAL 240 n 18 VAL 240 B PHE 241 n 19 PHE 241 B LEU 242 n 20 LEU 242 B PHE 243 n 21 PHE 243 B PRO 244 n 22 PRO 244 B PRO 245 n 23 PRO 245 B LYS 246 n 24 LYS 246 B PRO 247 n 25 PRO 247 B LYS 248 n 26 LYS 248 B ASP 249 n 27 ASP 249 B THR 250 n 28 THR 250 B LEU 251 n 29 LEU 251 B MET 252 n 30 MET 252 B ILE 253 n 31 ILE 253 B SER 254 n 32 SER 254 B ARG 255 n 33 ARG 255 B THR 256 n 34 THR 256 B PRO 257 n 35 PRO 257 B GLU 258 n 36 GLU 258 B VAL 259 n 37 VAL 259 B THR 260 n 38 THR 260 B CYS 261 n 39 CYS 261 B VAL 262 n 40 VAL 262 B VAL 263 n 41 VAL 263 B VAL 264 n 42 VAL 264 B ASP 265 n 43 ASP 265 B VAL 266 n 44 VAL 266 B SER 267 n 45 SER 267 B HIS 268 n 46 HIS 268 B GLU 269 n 47 GLU 269 B ASP 270 n 48 ASP 270 B PRO 271 n 49 PRO 271 B GLN 272 n 50 GLN 272 B VAL 273 n 51 VAL 273 B LYS 274 n 52 LYS 274 B PHE 275 n 53 PHE 275 B ASN 276 n 54 ASN 276 B TRP 277 n 55 TRP 277 B TYR 278 n 56 TYR 278 B VAL 279 n 57 VAL 279 B ASP 280 n 58 ASP 280 B GLY 281 n 59 GLY 281 B VAL 282 n 60 VAL 282 B GLN 283 n 61 GLN 283 B VAL 284 n 62 VAL 284 B HIS 285 n 63 HIS 285 B ASN 286 n 64 ASN 286 B ALA 287 n 65 ALA 287 B LYS 288 n 66 LYS 288 B THR 289 n 67 THR 289 B LYS 290 n 68 LYS 290 B PRO 291 n 69 PRO 291 B ARG 292 n 70 ARG 292 B GLU 293 n 71 GLU 293 B GLN 294 n 72 GLN 294 B GLN 295 n 73 GLN 295 B TYR 296 n 74 TYR 296 B ASN 297 n 75 ASN 297 B SER 298 n 76 SER 298 B THR 299 n 77 THR 299 B TYR 300 n 78 TYR 300 B ARG 301 n 79 ARG 301 B VAL 302 n 80 VAL 302 B VAL 303 n 81 VAL 303 B SER 304 n 82 SER 304 B VAL 305 n 83 VAL 305 B LEU 306 n 84 LEU 306 B THR 307 n 85 THR 307 B VAL 308 n 86 VAL 308 B LEU 309 n 87 LEU 309 B HIS 310 n 88 HIS 310 B GLN 311 n 89 GLN 311 B ASN 312 n 90 ASN 312 B TRP 313 n 91 TRP 313 B LEU 314 n 92 LEU 314 B ASP 315 n 93 ASP 315 B GLY 316 n 94 GLY 316 B LYS 317 n 95 LYS 317 B GLU 318 n 96 GLU 318 B TYR 319 n 97 TYR 319 B LYS 320 n 98 LYS 320 B CYS 321 n 99 CYS 321 B LYS 322 n 100 LYS 322 B VAL 323 n 101 VAL 323 B SER 324 n 102 SER 324 B ASN 325 n 103 ASN 325 B LYS 326 n 104 LYS 326 B ALA 327 n 105 ALA 327 B LEU 328 n 106 LEU 328 B PRO 329 n 107 PRO 329 B ALA 330 n 108 ALA 330 B PRO 331 n 109 PRO 331 B ILE 332 n 110 ILE 332 B GLU 333 n 111 GLU 333 B LYS 334 n 112 LYS 334 B THR 335 n 113 THR 335 B ILE 336 n 114 ILE 336 B SER 337 n 115 SER 337 B LYS 338 n 116 LYS 338 B ALA 339 n 117 ALA 339 B LYS 340 n 118 LYS 340 B GLY 341 n 119 GLY 341 B GLN 342 n 120 GLN 342 B PRO 343 n 121 PRO 343 B ARG 344 n 122 ARG 344 B GLU 345 n 123 GLU 345 B PRO 346 n 124 PRO 346 B GLN 347 n 125 GLN 347 B VAL 348 n 126 VAL 348 B TYR 349 n 127 TYR 349 B THR 350 n 128 THR 350 B LEU 351 n 129 LEU 351 B PRO 352 n 130 PRO 352 B PRO 353 n 131 PRO 353 B SER 354 n 132 SER 354 B ARG 355 n 133 ARG 355 B GLU 356 n 134 GLU 356 B GLU 357 n 135 GLU 357 B MET 358 n 136 MET 358 B THR 359 n 137 THR 359 B LYS 360 n 138 LYS 360 B ASN 361 n 139 ASN 361 B GLN 362 n 140 GLN 362 B VAL 363 n 141 VAL 363 B SER 364 n 142 SER 364 B LEU 365 n 143 LEU 365 B THR 366 n 144 THR 366 B CYS 367 n 145 CYS 367 B LEU 368 n 146 LEU 368 B VAL 369 n 147 VAL 369 B LYS 370 n 148 LYS 370 B GLY 371 n 149 GLY 371 B PHE 372 n 150 PHE 372 B TYR 373 n 151 TYR 373 B PRO 374 n 152 PRO 374 B SER 375 n 153 SER 375 B ASP 376 n 154 ASP 376 B ILE 377 n 155 ILE 377 B ALA 378 n 156 ALA 378 B VAL 379 n 157 VAL 379 B GLU 380 n 158 GLU 380 B TRP 381 n 159 TRP 381 B GLU 382 n 160 GLU 382 B SER 383 n 161 SER 383 B ASN 384 n 162 ASN 384 B GLY 385 n 163 GLY 385 B GLN 386 n 164 GLN 386 B PRO 387 n 165 PRO 387 B GLU 388 n 166 GLU 388 B ASN 389 n 167 ASN 389 B ASN 390 n 168 ASN 390 B TYR 391 n 169 TYR 391 B LYS 392 n 170 LYS 392 B THR 393 n 171 THR 393 B THR 394 n 172 THR 394 B PRO 395 n 173 PRO 395 B PRO 396 n 174 PRO 396 B VAL 397 n 175 VAL 397 B LEU 398 n 176 LEU 398 B ASP 399 n 177 ASP 399 B SER 400 n 178 SER 400 B ASP 401 n 179 ASP 401 B GLY 402 n 180 GLY 402 B SER 403 n 181 SER 403 B PHE 404 n 182 PHE 404 B PHE 405 n 183 PHE 405 B LEU 406 n 184 LEU 406 B TYR 407 n 185 TYR 407 B SER 408 n 186 SER 408 B LYS 409 n 187 LYS 409 B LEU 410 n 188 LEU 410 B THR 411 n 189 THR 411 B VAL 412 n 190 VAL 412 B ASP 413 n 191 ASP 413 B LYS 414 n 192 LYS 414 B SER 415 n 193 SER 415 B ARG 416 n 194 ARG 416 B TRP 417 n 195 TRP 417 B GLN 418 n 196 GLN 418 B GLN 419 n 197 GLN 419 B GLY 420 n 198 GLY 420 B ASN 421 n 199 ASN 421 B VAL 422 n 200 VAL 422 B PHE 423 n 201 PHE 423 B SER 424 n 202 SER 424 B CYS 425 n 203 CYS 425 B SER 426 n 204 SER 426 B VAL 427 n 205 VAL 427 B MET 428 n 206 MET 428 B HIS 429 n 207 HIS 429 B GLU 430 n 208 GLU 430 B ALA 431 n 209 ALA 431 B LEU 432 n 210 LEU 432 B HIS 433 n 211 HIS 433 B ASN 434 n 212 ASN 434 B HIS 435 n 213 HIS 435 B TYR 436 n 214 TYR 436 B THR 437 n 215 THR 437 B GLN 438 n 216 GLN 438 B LYS 439 n 217 LYS 439 B SER 440 n 218 SER 440 B LEU 441 n 219 LEU 441 B SER 442 n 220 SER 442 B LEU 443 n 221 LEU 443 B SER 444 n 222 SER 444 B n 223 445 B n 224 446 B author_and_software_defined_assembly PISA 2 dimeric 8080 57 22020 A ASN 297 GLYCOSYLATION SITE A ASN 75 ASN B ASN 297 GLYCOSYLATION SITE B ASN 75 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 239 A N SER 17 A O VAL 264 A O VAL 42 A O CYS 261 A O CYS 39 A N SER 304 A N SER 82 A O ARG 301 A O ARG 79 A N GLN 294 A N GLN 72 A N VAL 284 A N VAL 62 A O TRP 277 A O TRP 55 A O ASN 276 A O ASN 54 A N LYS 322 A N LYS 100 A O TYR 319 A O TYR 97 A N ILE 336 A N ILE 114 A O TYR 349 A O TYR 127 A N LEU 368 A N LEU 146 A O CYS 367 A O CYS 145 A N SER 408 A N SER 186 A O PHE 405 A O PHE 183 A N VAL 397 A N VAL 175 A N GLU 388 A N GLU 166 A O TRP 381 A O TRP 159 A O GLU 380 A O GLU 158 A N SER 426 A N SER 204 A O VAL 427 A O VAL 205 A N THR 437 A N THR 215 B N SER 239 B N SER 17 B O VAL 264 B O VAL 42 B O CYS 261 B O CYS 39 B N SER 304 B N SER 82 B O ARG 301 B O ARG 79 B N GLN 294 B N GLN 72 B N VAL 284 B N VAL 62 B O TRP 277 B O TRP 55 B O ASN 276 B O ASN 54 B N LYS 322 B N LYS 100 B O TYR 319 B O TYR 97 B N ILE 336 B N ILE 114 B O TYR 349 B O TYR 127 B N LEU 368 B N LEU 146 B O CYS 367 B O CYS 145 B N SER 408 B N SER 186 B O PHE 405 B O PHE 183 B N VAL 397 B N VAL 175 B N GLU 388 B N GLU 166 B O TRP 381 B O TRP 159 B O GLU 380 B O GLU 158 B N SER 426 B N SER 204 B O VAL 427 B O VAL 205 B N THR 437 B N THR 215 1 A CA SER 444 A CA SER 222 1 Y 1 A C SER 444 A C SER 222 1 Y 1 A O SER 444 A O SER 222 1 Y 1 A CB SER 444 A CB SER 222 1 Y 1 A OG SER 444 A OG SER 222 1 Y 1 B CA SER 444 B CA SER 222 1 Y 1 B C SER 444 B C SER 222 1 Y 1 B O SER 444 B O SER 222 1 Y 1 B CB SER 444 B CB SER 222 1 Y 1 B OG SER 444 B OG SER 222 1 Y 1 A THR 223 A THR 1 1 Y 1 A HIS 224 A HIS 2 1 Y 1 A THR 225 A THR 3 1 Y 1 A CYS 226 A CYS 4 1 Y 1 A PRO 227 A PRO 5 1 Y 1 A PRO 228 A PRO 6 1 Y 1 A CYS 229 A CYS 7 1 Y 1 A PRO 230 A PRO 8 1 Y 1 A ALA 231 A ALA 9 1 Y 1 A PRO 232 A PRO 10 1 Y 1 A GLU 233 A GLU 11 1 Y 1 A LEU 234 A LEU 12 1 Y 1 A LEU 235 A LEU 13 1 Y 1 A GLY 236 A GLY 14 1 Y 1 A GLY 237 A GLY 15 1 Y 1 A PRO 445 A PRO 223 1 Y 1 A GLY 446 A GLY 224 1 Y 1 B THR 223 B THR 1 1 Y 1 B HIS 224 B HIS 2 1 Y 1 B THR 225 B THR 3 1 Y 1 B CYS 226 B CYS 4 1 Y 1 B PRO 227 B PRO 5 1 Y 1 B PRO 228 B PRO 6 1 Y 1 B CYS 229 B CYS 7 1 Y 1 B PRO 230 B PRO 8 1 Y 1 B ALA 231 B ALA 9 1 Y 1 B PRO 232 B PRO 10 1 Y 1 B GLU 233 B GLU 11 1 Y 1 B LEU 234 B LEU 12 1 Y 1 B LEU 235 B LEU 13 1 Y 1 B GLY 236 B GLY 14 1 Y 1 B GLY 237 B GLY 15 1 Y 1 B PRO 445 B PRO 223 1 Y 1 B GLY 446 B GLY 224 1 Y 1 C C1 MAN 3 WRONG HAND 1 C C1 FUC 9 WRONG HAND 1 C C5 FUC 9 WRONG HAND 1 D C1 MAN 3 WRONG HAND 1 D C1 FUC 9 WRONG HAND 1 D C5 FUC 9 WRONG HAND 1 A VAL 259 10.38 1 A ASP 280 -10.63 1 A ALA 287 -11.57 1 A LEU 309 10.15 1 A ASN 384 -10.58 1 A ASP 401 12.75 1 A TRP 417 -10.35 1 B LYS 246 10.90 1 B HIS 268 10.28 1 B ALA 287 -13.30 1 B SER 298 11.25 1 B ASP 315 -13.28 1 B ASN 389 10.30 1 B ASP 401 11.20 1 B LEU 443 10.02 1 A ASN 276 0.073 SIDE CHAIN 1 A ASN 312 0.070 SIDE CHAIN 1 A GLU 318 0.083 SIDE CHAIN 1 A GLN 342 0.073 SIDE CHAIN 1 A ASN 361 0.088 SIDE CHAIN 1 A GLN 362 0.085 SIDE CHAIN 1 A ASP 376 0.076 SIDE CHAIN 1 A GLU 382 0.089 SIDE CHAIN 1 A GLN 419 0.083 SIDE CHAIN 1 A GLU 430 0.079 SIDE CHAIN 1 B ASP 249 0.073 SIDE CHAIN 1 B ASN 276 0.079 SIDE CHAIN 1 B ASP 280 0.076 SIDE CHAIN 1 B GLN 283 0.082 SIDE CHAIN 1 B ASP 315 0.074 SIDE CHAIN 1 B ASN 325 0.090 SIDE CHAIN 1 B GLN 342 0.098 SIDE CHAIN 1 B ASP 376 0.073 SIDE CHAIN 1 B GLU 382 0.095 SIDE CHAIN 1 B GLU 388 0.071 SIDE CHAIN 1 B ASP 399 0.083 SIDE CHAIN 1 B ASP 413 0.088 SIDE CHAIN 1 B GLN 418 0.078 SIDE CHAIN 1 B GLN 438 0.088 SIDE CHAIN 1 A A NE1 CE2 TRP TRP 277 277 -0.103 0.013 1.371 1.268 N 1 A A NE1 CE2 TRP TRP 313 313 -0.098 0.013 1.371 1.273 N 1 A A NE1 CE2 TRP TRP 381 381 -0.095 0.013 1.371 1.276 N 1 A A NE1 CE2 TRP TRP 417 417 -0.099 0.013 1.371 1.272 N 1 B B NE1 CE2 TRP TRP 277 277 -0.101 0.013 1.371 1.270 N 1 B B NE1 CE2 TRP TRP 313 313 -0.100 0.013 1.371 1.271 N 1 B B NE1 CE2 TRP TRP 381 381 -0.104 0.013 1.371 1.267 N 1 B B NE1 CE2 TRP TRP 417 417 -0.098 0.013 1.371 1.273 N 1 A B OD1 ND2 ASN ASN 389 389 1.69 1_555 4_566 1 A A CG NE2 HIS HIS 268 285 1.81 1_555 2_674 1 A A ND1 NE2 HIS HIS 268 285 2.01 1_555 2_674 1 A A CB NE2 HIS HIS 268 285 2.16 1_555 2_674 1 A SER 267 94.80 151.19 1 A PRO 271 -66.94 0.40 1 A ASP 280 72.48 -31.66 1 A HIS 285 36.93 -93.15 1 A ALA 287 52.75 -94.25 1 A LYS 288 -157.27 53.89 1 A ARG 292 167.49 145.65 1 A ASN 297 20.71 -86.21 1 A SER 298 -160.58 26.81 1 A ASN 325 -166.21 110.56 1 A LYS 326 -30.47 -39.13 1 A ASN 384 -160.02 -122.72 1 A ASN 389 -100.72 -64.60 1 B HIS 268 -6.44 -61.75 1 B ASP 280 70.21 -87.05 1 B HIS 285 40.20 -95.39 1 B ALA 287 52.86 -98.39 1 B LYS 288 -152.77 63.02 1 B PRO 291 -72.19 -155.47 1 B ARG 292 149.91 138.61 1 B ASN 297 17.68 -90.07 1 B SER 298 -152.43 34.63 1 B ASN 325 -179.94 106.41 1 B LYS 326 -23.93 -45.54 1 B SER 337 173.37 176.52 1 B TYR 373 -174.18 140.71 1 B ASN 384 -152.22 -110.21 1 B ASN 390 -82.08 46.12 2.9 1 2.9 0 3532 220 0 3312 FC FRAGMENT (IGG1 CLASS) CRYSTALLOGRAPHIC REFINEMENT AND ATOMIC MODELS OF A HUMAN FC FRAGMENT AND ITS COMPLEX WITH FRAGMENT B OF PROTEIN A FROM STAPHYLOCOCCUS AUREUS AT 2.9-AND 2.8-ANGSTROMS RESOLUTION 1 N N 1 N N 2 N N 2 N N THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT CONTAINS ONE FC FRAGMENT WHICH CONSISTS OF TWO CHEMICALLY IDENTICAL POLYPEPTIDE CHAINS EACH WITH ATTACHED POLYSACCHARIDE. THESE TWO CHAINS ARE DESIGNATED CHAIN 1 AND CHAIN 2 BY THE DEPOSITOR AND REPRESENTED WITH CHAIN IDENTIFIERS A AND B BELOW. THE CH2 AND CH3 DOMAINS OF THE TWO CRYSTALLOGRAPHICALLY INDEPENDENT POLYPEPTIDE CHAINS ARE RELATED BY NON-CRYSTALLOGRAPHIC (APPROXIMATE) DIADS (SEE JRNL REFERENCE ABOVE FOR A COMPLETE DISCUSSION). THE FOLLOWING TRANSFORMATION, WHEN APPLIED TO THE CH2 DOMAIN OF CHAIN A (RESIDUES PRO A 238 THROUGH GLY A 341 TOGETHER WITH THE POLYSACCHARIDE), WILL YIELD APPROXIMATE COORDINATES FOR THE CH2 DOMAIN OF CHAIN B (RESIDUES PRO B 238 THROUGH GLY B 341 TOGETHER WITH THE POLYSACCHARIDE). TRNSF1 1 -0.99391 -0.03853 -0.10322 92.070 TRNSF2 1 -0.06679 0.95579 0.28635 -0.310 TRNSF3 1 0.08759 0.29136 -0.95207 11.160 THE FOLLOWING TRANSFORMATION, WHEN APPLIED TO THE CH3 DOMAIN OF CHAIN A (RESIDUES GLN A 342 THROUGH LEU A 443), WILL YIELD APPROXIMATE COORDINATES FOR THE CH3 DOMAIN OF CHAIN B (RESIDUES GLN B 342 THROUGH LEU B 443). TRNSF1 2 -0.99907 -0.03950 -0.01721 88.510 TRNSF2 2 -0.04232 0.97468 0.21956 -1.010 TRNSF3 2 0.00810 0.22008 -0.97544 24.570 A LYS 246 A LYS 24 HELX_P A MET 252 A MET 30 1 1 7 A LEU 309 A LEU 87 HELX_P A ASP 315 A ASP 93 1 2 7 A SER 354 A SER 132 HELX_P A LYS 360 A LYS 138 5 3 7 A LYS 414 A LYS 192 HELX_P A GLN 419 A GLN 197 1 4 6 B LYS 246 B LYS 24 HELX_P B MET 252 B MET 30 1 5 7 B LEU 309 B LEU 87 HELX_P B GLY 316 B GLY 94 1 6 8 B SER 354 B SER 132 HELX_P B MET 358 B MET 136 5 7 5 B LYS 414 B LYS 192 HELX_P B GLY 420 B GLY 198 1 8 7 disulf 2.053 A CYS 261 A SG CYS 39 1_555 A CYS 321 A SG CYS 99 1_555 disulf 2.025 A CYS 367 A SG CYS 145 1_555 A CYS 425 A SG CYS 203 1_555 disulf 2.040 B CYS 261 B SG CYS 39 1_555 B CYS 321 B SG CYS 99 1_555 disulf 2.042 B CYS 367 B SG CYS 145 1_555 B CYS 425 B SG CYS 203 1_555 covale 1.476 one N-Glycosylation A ASN 297 A ND2 ASN 75 1_555 C NAG 1 C C1 NAG 1_555 covale 1.472 one N-Glycosylation B ASN 297 B ND2 ASN 75 1_555 D NAG 1 D C1 NAG 1_555 covale 1.431 both C NAG 1 C O4 NAG 1_555 C NAG 2 C C1 NAG 1_555 covale 1.433 both C NAG 1 C O6 NAG 1_555 C FUC 9 C C1 FUC 1_555 covale 1.424 both C NAG 2 C O4 NAG 1_555 C MAN 3 C C1 MAN 1_555 covale 1.424 both C MAN 3 C O6 MAN 1_555 C MAN 4 C C1 MAN 1_555 covale 1.428 both C MAN 3 C O3 MAN 1_555 C MAN 7 C C1 MAN 1_555 covale 1.426 both C MAN 4 C O2 MAN 1_555 C NAG 5 C C1 NAG 1_555 covale 1.439 both C NAG 5 C O4 NAG 1_555 C GAL 6 C C1 GAL 1_555 covale 1.439 both C MAN 7 C O2 MAN 1_555 C NAG 8 C C1 NAG 1_555 covale 1.436 both D NAG 1 D O4 NAG 1_555 D NAG 2 D C1 NAG 1_555 covale 1.430 both D NAG 1 D O6 NAG 1_555 D FUC 9 D C1 FUC 1_555 covale 1.432 both D NAG 2 D O4 NAG 1_555 D MAN 3 D C1 MAN 1_555 covale 1.411 both D MAN 3 D O6 MAN 1_555 D MAN 4 D C1 MAN 1_555 covale 1.425 both D MAN 3 D O3 MAN 1_555 D MAN 7 D C1 MAN 1_555 covale 1.419 both D MAN 4 D O2 MAN 1_555 D NAG 5 D C1 NAG 1_555 covale 1.433 both D NAG 5 D O4 NAG 1_555 D GAL 6 D C1 GAL 1_555 covale 1.437 both D MAN 7 D O2 MAN 1_555 D NAG 8 D C1 NAG 1_555 IMMUNOGLOBULIN IMMUNOGLOBULIN A TYR 373 A TYR 151 1 A PRO 374 A PRO 152 -10.34 B TYR 373 B TYR 151 1 B PRO 374 B PRO 152 -11.50 GC1_HUMAN UNP 1 1 P01857 ASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQT YICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNW YVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDE LTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYT QKSLSLSPGK 106 329 1FC1 223 446 P01857 A 1 1 224 106 329 1FC1 223 446 P01857 B 1 1 224 1 GLU conflict GLN 272 1FC1 A P01857 UNP 155 50 1 GLU conflict GLN 283 1FC1 A P01857 UNP 166 61 1 GLU conflict GLN 294 1FC1 A P01857 UNP 177 72 1 ASP conflict ASN 312 1FC1 A P01857 UNP 195 90 1 ASN conflict ASP 315 1FC1 A P01857 UNP 198 93 1 ASP conflict GLU 356 1FC1 A P01857 UNP 239 134 1 LEU conflict MET 358 1FC1 A P01857 UNP 241 136 2 GLU conflict GLN 272 1FC1 B P01857 UNP 155 50 2 GLU conflict GLN 283 1FC1 B P01857 UNP 166 61 2 GLU conflict GLN 294 1FC1 B P01857 UNP 177 72 2 ASP conflict ASN 312 1FC1 B P01857 UNP 195 90 2 ASN conflict ASP 315 1FC1 B P01857 UNP 198 93 2 ASP conflict GLU 356 1FC1 B P01857 UNP 239 134 2 LEU conflict MET 358 1FC1 B P01857 UNP 241 136 4 4 4 4 4 4 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 239 A SER 17 A PHE 243 A PHE 21 A THR 256 A THR 34 A VAL 264 A VAL 42 A THR 299 A THR 77 A LEU 309 A LEU 87 A LYS 290 A LYS 68 A TYR 296 A TYR 74 A VAL 282 A VAL 60 A VAL 284 A VAL 62 A LYS 274 A LYS 52 A VAL 279 A VAL 57 A GLU 318 A GLU 96 A ASN 325 A ASN 103 A ILE 332 A ILE 110 A ILE 336 A ILE 114 A GLN 342 A GLN 120 A LEU 351 A LEU 129 A GLN 362 A GLN 140 A TYR 373 A TYR 151 A SER 403 A SER 181 A ASP 413 A ASP 191 A ASN 390 A ASN 168 A LEU 398 A LEU 176 A GLN 386 A GLN 164 A GLU 388 A GLU 166 A ILE 377 A ILE 155 A GLU 382 A GLU 160 A VAL 422 A VAL 200 A HIS 429 A HIS 207 A TYR 436 A TYR 214 A LEU 443 A LEU 221 B SER 239 B SER 17 B PHE 243 B PHE 21 B THR 256 B THR 34 B VAL 264 B VAL 42 B THR 299 B THR 77 B LEU 309 B LEU 87 B LYS 290 B LYS 68 B TYR 296 B TYR 74 B VAL 282 B VAL 60 B VAL 284 B VAL 62 B LYS 274 B LYS 52 B VAL 279 B VAL 57 B GLU 318 B GLU 96 B ASN 325 B ASN 103 B ILE 332 B ILE 110 B ILE 336 B ILE 114 B GLN 342 B GLN 120 B LEU 351 B LEU 129 B GLN 362 B GLN 140 B TYR 373 B TYR 151 B SER 403 B SER 181 B ASP 413 B ASP 191 B ASN 390 B ASN 168 B LEU 398 B LEU 176 B GLN 386 B GLN 164 B GLU 388 B GLU 166 B ILE 377 B ILE 155 B GLU 382 B GLU 160 B VAL 422 B VAL 200 B HIS 429 B HIS 207 B TYR 436 B TYR 214 B LEU 443 B LEU 221 19 P 21 21 21