0.006723
0.003881
0.000000
0.000000
0.007762
0.000000
0.000000
0.000000
0.009983
0.00000
0.00000
0.00000
Liao, D.I.
Qian, J.
Chisholm, D.A.
Jordan, D.B.
Diner, B.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
148.753
148.753
100.173
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
7
749
753
10.1038/78973
10966643
Crystal structures of the photosystem II D1 C-terminal processing protease.
2000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
102
1
CCD
1999-04-08
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.907
1.0
5ID-B
APS
0.907
SYNCHROTRON
APS BEAMLINE 5ID-B
40708.680
PHOTOSYSTEM II D1 PROTEASE
RESIDUES 77-464
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
149
nat
water
MATURE FORM OF THE ENZYME, NATIVE
D1 C-TERMINAL PROCESSING PROTEASE
no
no
MVTSEQLLFLEAWRAVDRAYVDKSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRFLEPSRLAALRRGT
AGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVEVVLHAPGA
PSNTRTLQLTRQKVTINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNG
GGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFG
KGLIQTVVDLSDGSGVAVTVARYQTPAGVDINKIGVSPDVQLDPEVLPTDLEGVCRVLGSDAAPRLFG
MVTSEQLLFLEAWRAVDRAYVDKSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRFLEPSRLAALRRGT
AGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVEVVLHAPGA
PSNTRTLQLTRQKVTINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNG
GGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFG
KGLIQTVVDLSDGSGVAVTVARYQTPAGVDINKIGVSPDVQLDPEVLPTDLEGVCRVLGSDAAPRLFG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
3088
Scenedesmus obliquus
469008
Escherichia coli BL21(DE3)
BL21(DE3)PLYS
PET-32(A)-D1P(+AM)
2.62
52.98
VAPOR DIFFUSION, HANGING DROP
7.5
ammonium sulfate, lithium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
pdbx_struct_special_symmetry
entity
entity_src_gen
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Derived calculations
Data collection
Source and taxonomy
Structure summary
1
0
2001-01-18
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-10-03
1
4
2018-10-10
_entity.formula_weight
_entity_src_gen.pdbx_host_org_scientific_name
Structure of Seleno-Met Derivative of L132M/L210M Mutant
Structure of the Same Enzyme in Different Crystal Form
Structure of the Same Enzyme in Different Crystal Form
RCSB
Y
RCSB
2000-07-18
REL
SO4
SULFATE ION
HOH
water
SUL
151
2
SO4
SO4
465
A
SUL
152
2
SO4
SO4
466
A
HOH
1
3
HOH
HOH
467
A
HOH
2
3
HOH
HOH
468
A
HOH
3
3
HOH
HOH
469
A
HOH
4
3
HOH
HOH
470
A
HOH
5
3
HOH
HOH
471
A
HOH
6
3
HOH
HOH
472
A
HOH
7
3
HOH
HOH
473
A
HOH
8
3
HOH
HOH
474
A
HOH
9
3
HOH
HOH
475
A
HOH
10
3
HOH
HOH
476
A
HOH
11
3
HOH
HOH
477
A
HOH
12
3
HOH
HOH
478
A
HOH
13
3
HOH
HOH
479
A
HOH
14
3
HOH
HOH
480
A
HOH
15
3
HOH
HOH
481
A
HOH
16
3
HOH
HOH
482
A
HOH
17
3
HOH
HOH
483
A
HOH
18
3
HOH
HOH
484
A
HOH
19
3
HOH
HOH
485
A
HOH
20
3
HOH
HOH
486
A
HOH
21
3
HOH
HOH
487
A
HOH
22
3
HOH
HOH
488
A
HOH
23
3
HOH
HOH
489
A
HOH
24
3
HOH
HOH
490
A
HOH
25
3
HOH
HOH
491
A
HOH
26
3
HOH
HOH
492
A
HOH
27
3
HOH
HOH
493
A
HOH
28
3
HOH
HOH
494
A
HOH
29
3
HOH
HOH
495
A
HOH
30
3
HOH
HOH
496
A
HOH
31
3
HOH
HOH
497
A
HOH
32
3
HOH
HOH
498
A
HOH
33
3
HOH
HOH
499
A
HOH
34
3
HOH
HOH
500
A
HOH
35
3
HOH
HOH
501
A
HOH
36
3
HOH
HOH
502
A
HOH
37
3
HOH
HOH
503
A
HOH
38
3
HOH
HOH
504
A
HOH
39
3
HOH
HOH
505
A
HOH
40
3
HOH
HOH
506
A
HOH
41
3
HOH
HOH
507
A
HOH
42
3
HOH
HOH
508
A
HOH
43
3
HOH
HOH
509
A
HOH
44
3
HOH
HOH
510
A
HOH
45
3
HOH
HOH
511
A
HOH
46
3
HOH
HOH
512
A
HOH
47
3
HOH
HOH
513
A
HOH
48
3
HOH
HOH
514
A
HOH
49
3
HOH
HOH
515
A
HOH
50
3
HOH
HOH
516
A
HOH
51
3
HOH
HOH
517
A
HOH
52
3
HOH
HOH
518
A
HOH
53
3
HOH
HOH
519
A
HOH
54
3
HOH
HOH
520
A
HOH
55
3
HOH
HOH
521
A
HOH
56
3
HOH
HOH
522
A
HOH
57
3
HOH
HOH
523
A
HOH
58
3
HOH
HOH
524
A
HOH
59
3
HOH
HOH
525
A
HOH
60
3
HOH
HOH
526
A
HOH
61
3
HOH
HOH
527
A
HOH
62
3
HOH
HOH
528
A
HOH
63
3
HOH
HOH
529
A
HOH
64
3
HOH
HOH
530
A
HOH
65
3
HOH
HOH
531
A
HOH
66
3
HOH
HOH
532
A
HOH
67
3
HOH
HOH
533
A
HOH
68
3
HOH
HOH
534
A
HOH
69
3
HOH
HOH
535
A
HOH
70
3
HOH
HOH
536
A
HOH
71
3
HOH
HOH
537
A
HOH
72
3
HOH
HOH
538
A
HOH
73
3
HOH
HOH
539
A
HOH
74
3
HOH
HOH
540
A
HOH
75
3
HOH
HOH
541
A
HOH
76
3
HOH
HOH
542
A
HOH
77
3
HOH
HOH
543
A
HOH
78
3
HOH
HOH
544
A
HOH
79
3
HOH
HOH
545
A
HOH
80
3
HOH
HOH
546
A
HOH
81
3
HOH
HOH
547
A
HOH
82
3
HOH
HOH
548
A
HOH
83
3
HOH
HOH
549
A
HOH
84
3
HOH
HOH
550
A
HOH
85
3
HOH
HOH
551
A
HOH
86
3
HOH
HOH
552
A
HOH
87
3
HOH
HOH
553
A
HOH
88
3
HOH
HOH
554
A
HOH
89
3
HOH
HOH
555
A
HOH
90
3
HOH
HOH
556
A
HOH
91
3
HOH
HOH
557
A
HOH
92
3
HOH
HOH
558
A
HOH
93
3
HOH
HOH
559
A
HOH
94
3
HOH
HOH
560
A
HOH
95
3
HOH
HOH
561
A
HOH
96
3
HOH
HOH
562
A
HOH
97
3
HOH
HOH
563
A
HOH
98
3
HOH
HOH
564
A
HOH
99
3
HOH
HOH
565
A
HOH
100
3
HOH
HOH
566
A
HOH
101
3
HOH
HOH
567
A
HOH
102
3
HOH
HOH
568
A
HOH
103
3
HOH
HOH
569
A
HOH
104
3
HOH
HOH
570
A
HOH
105
3
HOH
HOH
571
A
HOH
106
3
HOH
HOH
572
A
HOH
107
3
HOH
HOH
573
A
HOH
108
3
HOH
HOH
574
A
HOH
109
3
HOH
HOH
575
A
HOH
110
3
HOH
HOH
576
A
HOH
111
3
HOH
HOH
577
A
HOH
112
3
HOH
HOH
578
A
HOH
113
3
HOH
HOH
579
A
HOH
114
3
HOH
HOH
580
A
HOH
115
3
HOH
HOH
581
A
HOH
116
3
HOH
HOH
582
A
HOH
117
3
HOH
HOH
583
A
HOH
118
3
HOH
HOH
584
A
HOH
119
3
HOH
HOH
585
A
HOH
120
3
HOH
HOH
586
A
HOH
121
3
HOH
HOH
587
A
HOH
122
3
HOH
HOH
588
A
HOH
123
3
HOH
HOH
589
A
HOH
124
3
HOH
HOH
590
A
HOH
125
3
HOH
HOH
591
A
HOH
126
3
HOH
HOH
592
A
HOH
127
3
HOH
HOH
593
A
HOH
128
3
HOH
HOH
594
A
HOH
129
3
HOH
HOH
595
A
HOH
130
3
HOH
HOH
596
A
HOH
131
3
HOH
HOH
597
A
HOH
132
3
HOH
HOH
598
A
HOH
133
3
HOH
HOH
599
A
HOH
134
3
HOH
HOH
600
A
HOH
135
3
HOH
HOH
601
A
HOH
136
3
HOH
HOH
602
A
HOH
137
3
HOH
HOH
603
A
HOH
138
3
HOH
HOH
604
A
HOH
139
3
HOH
HOH
605
A
HOH
140
3
HOH
HOH
606
A
HOH
141
3
HOH
HOH
607
A
HOH
142
3
HOH
HOH
608
A
HOH
143
3
HOH
HOH
609
A
HOH
144
3
HOH
HOH
610
A
HOH
145
3
HOH
HOH
611
A
HOH
146
3
HOH
HOH
612
A
HOH
147
3
HOH
HOH
613
A
HOH
148
3
HOH
HOH
614
A
HOH
149
3
HOH
HOH
615
A
MET
77
n
1
MET
77
A
VAL
78
n
2
VAL
78
A
THR
79
n
3
THR
79
A
SER
80
n
4
SER
80
A
GLU
81
n
5
GLU
81
A
GLN
82
n
6
GLN
82
A
LEU
83
n
7
LEU
83
A
LEU
84
n
8
LEU
84
A
PHE
85
n
9
PHE
85
A
LEU
86
n
10
LEU
86
A
GLU
87
n
11
GLU
87
A
ALA
88
n
12
ALA
88
A
TRP
89
n
13
TRP
89
A
ARG
90
n
14
ARG
90
A
ALA
91
n
15
ALA
91
A
VAL
92
n
16
VAL
92
A
ASP
93
n
17
ASP
93
A
ARG
94
n
18
ARG
94
A
ALA
95
n
19
ALA
95
A
TYR
96
n
20
TYR
96
A
VAL
97
n
21
VAL
97
A
ASP
98
n
22
ASP
98
A
LYS
99
n
23
LYS
99
A
SER
100
n
24
SER
100
A
PHE
101
n
25
PHE
101
A
ASN
102
n
26
ASN
102
A
GLY
103
n
27
GLY
103
A
GLN
104
n
28
GLN
104
A
SER
105
n
29
SER
105
A
TRP
106
n
30
TRP
106
A
PHE
107
n
31
PHE
107
A
LYS
108
n
32
LYS
108
A
LEU
109
n
33
LEU
109
A
ARG
110
n
34
ARG
110
A
GLU
111
n
35
GLU
111
A
THR
112
n
36
THR
112
A
TYR
113
n
37
TYR
113
A
LEU
114
n
38
LEU
114
A
LYS
115
n
39
LYS
115
A
LYS
116
n
40
LYS
116
A
GLU
117
n
41
GLU
117
A
PRO
118
n
42
PRO
118
A
MET
119
n
43
MET
119
A
ASP
120
n
44
ASP
120
A
ARG
121
n
45
ARG
121
A
ARG
122
n
46
ARG
122
A
ALA
123
n
47
ALA
123
A
GLN
124
n
48
GLN
124
A
THR
125
n
49
THR
125
A
TYR
126
n
50
TYR
126
A
ASP
127
n
51
ASP
127
A
ALA
128
n
52
ALA
128
A
ILE
129
n
53
ILE
129
A
ARG
130
n
54
ARG
130
A
LYS
131
n
55
LYS
131
A
LEU
132
n
56
LEU
132
A
LEU
133
n
57
LEU
133
A
ALA
134
n
58
ALA
134
A
VAL
135
n
59
VAL
135
A
LEU
136
n
60
LEU
136
A
ASP
137
n
61
ASP
137
A
ASP
138
n
62
ASP
138
A
PRO
139
n
63
PRO
139
A
PHE
140
n
64
PHE
140
A
THR
141
n
65
THR
141
A
ARG
142
n
66
ARG
142
A
PHE
143
n
67
PHE
143
A
LEU
144
n
68
LEU
144
A
GLU
145
n
69
GLU
145
A
PRO
146
n
70
PRO
146
A
SER
147
n
71
SER
147
A
ARG
148
n
72
ARG
148
A
LEU
149
n
73
LEU
149
A
ALA
150
n
74
ALA
150
A
ALA
151
n
75
ALA
151
A
LEU
152
n
76
LEU
152
A
ARG
153
n
77
ARG
153
A
ARG
154
n
78
ARG
154
A
GLY
155
n
79
GLY
155
A
THR
156
n
80
THR
156
A
ALA
157
n
81
ALA
157
A
GLY
158
n
82
GLY
158
A
SER
159
n
83
SER
159
A
VAL
160
n
84
VAL
160
A
THR
161
n
85
THR
161
A
GLY
162
n
86
GLY
162
A
VAL
163
n
87
VAL
163
A
GLY
164
n
88
GLY
164
A
LEU
165
n
89
LEU
165
A
GLU
166
n
90
GLU
166
A
ILE
167
n
91
ILE
167
A
THR
168
n
92
THR
168
A
TYR
169
n
93
TYR
169
A
ASP
170
n
94
ASP
170
A
GLY
171
n
95
GLY
171
A
GLY
172
n
96
GLY
172
A
SER
173
n
97
SER
173
A
GLY
174
n
98
GLY
174
A
LYS
175
n
99
LYS
175
A
ASP
176
n
100
ASP
176
A
VAL
177
n
101
VAL
177
A
VAL
178
n
102
VAL
178
A
VAL
179
n
103
VAL
179
A
LEU
180
n
104
LEU
180
A
THR
181
n
105
THR
181
A
PRO
182
n
106
PRO
182
A
ALA
183
n
107
ALA
183
A
PRO
184
n
108
PRO
184
A
GLY
185
n
109
GLY
185
A
GLY
186
n
110
GLY
186
A
PRO
187
n
111
PRO
187
A
ALA
188
n
112
ALA
188
A
GLU
189
n
113
GLU
189
A
LYS
190
n
114
LYS
190
A
ALA
191
n
115
ALA
191
A
GLY
192
n
116
GLY
192
A
ALA
193
n
117
ALA
193
A
ARG
194
n
118
ARG
194
A
ALA
195
n
119
ALA
195
A
GLY
196
n
120
GLY
196
A
ASP
197
n
121
ASP
197
A
VAL
198
n
122
VAL
198
A
ILE
199
n
123
ILE
199
A
VAL
200
n
124
VAL
200
A
THR
201
n
125
THR
201
A
VAL
202
n
126
VAL
202
A
ASP
203
n
127
ASP
203
A
GLY
204
n
128
GLY
204
A
THR
205
n
129
THR
205
A
ALA
206
n
130
ALA
206
A
VAL
207
n
131
VAL
207
A
LYS
208
n
132
LYS
208
A
GLY
209
n
133
GLY
209
A
LEU
210
n
134
LEU
210
A
SER
211
n
135
SER
211
A
LEU
212
n
136
LEU
212
A
TYR
213
n
137
TYR
213
A
ASP
214
n
138
ASP
214
A
VAL
215
n
139
VAL
215
A
SER
216
n
140
SER
216
A
ASP
217
n
141
ASP
217
A
LEU
218
n
142
LEU
218
A
LEU
219
n
143
LEU
219
A
GLN
220
n
144
GLN
220
A
GLY
221
n
145
GLY
221
A
GLU
222
n
146
GLU
222
A
ALA
223
n
147
ALA
223
A
ASP
224
n
148
ASP
224
A
SER
225
n
149
SER
225
A
GLN
226
n
150
GLN
226
A
VAL
227
n
151
VAL
227
A
GLU
228
n
152
GLU
228
A
VAL
229
n
153
VAL
229
A
VAL
230
n
154
VAL
230
A
LEU
231
n
155
LEU
231
A
HIS
232
n
156
HIS
232
A
ALA
233
n
157
ALA
233
A
PRO
234
n
158
PRO
234
A
GLY
235
n
159
GLY
235
A
ALA
236
n
160
ALA
236
A
PRO
237
n
161
PRO
237
A
SER
238
n
162
SER
238
A
ASN
239
n
163
ASN
239
A
THR
240
n
164
THR
240
A
ARG
241
n
165
ARG
241
A
THR
242
n
166
THR
242
A
LEU
243
n
167
LEU
243
A
GLN
244
n
168
GLN
244
A
LEU
245
n
169
LEU
245
A
THR
246
n
170
THR
246
A
ARG
247
n
171
ARG
247
A
GLN
248
n
172
GLN
248
A
LYS
249
n
173
LYS
249
A
VAL
250
n
174
VAL
250
A
THR
251
n
175
THR
251
A
ILE
252
n
176
ILE
252
A
ASN
253
n
177
ASN
253
A
PRO
254
n
178
PRO
254
A
VAL
255
n
179
VAL
255
A
THR
256
n
180
THR
256
A
PHE
257
n
181
PHE
257
A
THR
258
n
182
THR
258
A
THR
259
n
183
THR
259
A
CYS
260
n
184
CYS
260
A
SER
261
n
185
SER
261
A
ASN
262
n
186
ASN
262
A
VAL
263
n
187
VAL
263
A
ALA
264
n
188
ALA
264
A
ALA
265
n
189
ALA
265
A
ALA
266
n
190
ALA
266
A
ALA
267
n
191
ALA
267
A
LEU
268
n
192
LEU
268
A
PRO
269
n
193
PRO
269
A
PRO
270
n
194
PRO
270
A
GLY
271
n
195
GLY
271
A
ALA
272
n
196
ALA
272
A
ALA
273
n
197
ALA
273
A
LYS
274
n
198
LYS
274
A
GLN
275
n
199
GLN
275
A
GLN
276
n
200
GLN
276
A
LEU
277
n
201
LEU
277
A
GLY
278
n
202
GLY
278
A
TYR
279
n
203
TYR
279
A
VAL
280
n
204
VAL
280
A
ARG
281
n
205
ARG
281
A
LEU
282
n
206
LEU
282
A
ALA
283
n
207
ALA
283
A
THR
284
n
208
THR
284
A
PHE
285
n
209
PHE
285
A
ASN
286
n
210
ASN
286
A
SER
287
n
211
SER
287
A
ASN
288
n
212
ASN
288
A
THR
289
n
213
THR
289
A
THR
290
n
214
THR
290
A
ALA
291
n
215
ALA
291
A
ALA
292
n
216
ALA
292
A
ALA
293
n
217
ALA
293
A
GLN
294
n
218
GLN
294
A
GLN
295
n
219
GLN
295
A
ALA
296
n
220
ALA
296
A
PHE
297
n
221
PHE
297
A
THR
298
n
222
THR
298
A
GLU
299
n
223
GLU
299
A
LEU
300
n
224
LEU
300
A
SER
301
n
225
SER
301
A
LYS
302
n
226
LYS
302
A
GLN
303
n
227
GLN
303
A
GLY
304
n
228
GLY
304
A
VAL
305
n
229
VAL
305
A
ALA
306
n
230
ALA
306
A
GLY
307
n
231
GLY
307
A
LEU
308
n
232
LEU
308
A
VAL
309
n
233
VAL
309
A
LEU
310
n
234
LEU
310
A
ASP
311
n
235
ASP
311
A
ILE
312
n
236
ILE
312
A
ARG
313
n
237
ARG
313
A
ASN
314
n
238
ASN
314
A
ASN
315
n
239
ASN
315
A
GLY
316
n
240
GLY
316
A
GLY
317
n
241
GLY
317
A
GLY
318
n
242
GLY
318
A
LEU
319
n
243
LEU
319
A
PHE
320
n
244
PHE
320
A
PRO
321
n
245
PRO
321
A
ALA
322
n
246
ALA
322
A
GLY
323
n
247
GLY
323
A
VAL
324
n
248
VAL
324
A
ASN
325
n
249
ASN
325
A
VAL
326
n
250
VAL
326
A
ALA
327
n
251
ALA
327
A
ARG
328
n
252
ARG
328
A
MET
329
n
253
MET
329
A
LEU
330
n
254
LEU
330
A
VAL
331
n
255
VAL
331
A
ASP
332
n
256
ASP
332
A
ARG
333
n
257
ARG
333
A
GLY
334
n
258
GLY
334
A
ASP
335
n
259
ASP
335
A
LEU
336
n
260
LEU
336
A
VAL
337
n
261
VAL
337
A
LEU
338
n
262
LEU
338
A
ILE
339
n
263
ILE
339
A
ALA
340
n
264
ALA
340
A
ASP
341
n
265
ASP
341
A
SER
342
n
266
SER
342
A
GLN
343
n
267
GLN
343
A
GLY
344
n
268
GLY
344
A
ILE
345
n
269
ILE
345
A
ARG
346
n
270
ARG
346
A
ASP
347
n
271
ASP
347
A
ILE
348
n
272
ILE
348
A
TYR
349
n
273
TYR
349
A
SER
350
n
274
SER
350
A
ALA
351
n
275
ALA
351
A
ASP
352
n
276
ASP
352
A
GLY
353
n
277
GLY
353
A
ASN
354
n
278
ASN
354
A
SER
355
n
279
SER
355
A
ILE
356
n
280
ILE
356
A
ASP
357
n
281
ASP
357
A
SER
358
n
282
SER
358
A
ALA
359
n
283
ALA
359
A
THR
360
n
284
THR
360
A
PRO
361
n
285
PRO
361
A
LEU
362
n
286
LEU
362
A
VAL
363
n
287
VAL
363
A
VAL
364
n
288
VAL
364
A
LEU
365
n
289
LEU
365
A
VAL
366
n
290
VAL
366
A
ASN
367
n
291
ASN
367
A
ARG
368
n
292
ARG
368
A
GLY
369
n
293
GLY
369
A
THR
370
n
294
THR
370
A
ALA
371
n
295
ALA
371
A
SER
372
n
296
SER
372
A
ALA
373
n
297
ALA
373
A
SER
374
n
298
SER
374
A
GLU
375
n
299
GLU
375
A
VAL
376
n
300
VAL
376
A
LEU
377
n
301
LEU
377
A
ALA
378
n
302
ALA
378
A
GLY
379
n
303
GLY
379
A
ALA
380
n
304
ALA
380
A
LEU
381
n
305
LEU
381
A
LYS
382
n
306
LYS
382
A
ASP
383
n
307
ASP
383
A
SER
384
n
308
SER
384
A
LYS
385
n
309
LYS
385
A
ARG
386
n
310
ARG
386
A
GLY
387
n
311
GLY
387
A
LEU
388
n
312
LEU
388
A
ILE
389
n
313
ILE
389
A
ALA
390
n
314
ALA
390
A
GLY
391
n
315
GLY
391
A
GLU
392
n
316
GLU
392
A
ARG
393
n
317
ARG
393
A
THR
394
n
318
THR
394
A
PHE
395
n
319
PHE
395
A
GLY
396
n
320
GLY
396
A
LYS
397
n
321
LYS
397
A
GLY
398
n
322
GLY
398
A
LEU
399
n
323
LEU
399
A
ILE
400
n
324
ILE
400
A
GLN
401
n
325
GLN
401
A
THR
402
n
326
THR
402
A
VAL
403
n
327
VAL
403
A
VAL
404
n
328
VAL
404
A
ASP
405
n
329
ASP
405
A
LEU
406
n
330
LEU
406
A
SER
407
n
331
SER
407
A
ASP
408
n
332
ASP
408
A
GLY
409
n
333
GLY
409
A
SER
410
n
334
SER
410
A
GLY
411
n
335
GLY
411
A
VAL
412
n
336
VAL
412
A
ALA
413
n
337
ALA
413
A
VAL
414
n
338
VAL
414
A
THR
415
n
339
THR
415
A
VAL
416
n
340
VAL
416
A
ALA
417
n
341
ALA
417
A
ARG
418
n
342
ARG
418
A
TYR
419
n
343
TYR
419
A
GLN
420
n
344
GLN
420
A
THR
421
n
345
THR
421
A
PRO
422
n
346
PRO
422
A
ALA
423
n
347
ALA
423
A
GLY
424
n
348
GLY
424
A
VAL
425
n
349
VAL
425
A
ASP
426
n
350
ASP
426
A
ILE
427
n
351
ILE
427
A
ASN
428
n
352
ASN
428
A
LYS
429
n
353
LYS
429
A
ILE
430
n
354
ILE
430
A
GLY
431
n
355
GLY
431
A
VAL
432
n
356
VAL
432
A
SER
433
n
357
SER
433
A
PRO
434
n
358
PRO
434
A
ASP
435
n
359
ASP
435
A
VAL
436
n
360
VAL
436
A
GLN
437
n
361
GLN
437
A
LEU
438
n
362
LEU
438
A
ASP
439
n
363
ASP
439
A
PRO
440
n
364
PRO
440
A
GLU
441
n
365
GLU
441
A
VAL
442
n
366
VAL
442
A
LEU
443
n
367
LEU
443
A
PRO
444
n
368
PRO
444
A
THR
445
n
369
THR
445
A
ASP
446
n
370
ASP
446
A
LEU
447
n
371
LEU
447
A
GLU
448
n
372
GLU
448
A
GLY
449
n
373
GLY
449
A
VAL
450
n
374
VAL
450
A
CYS
451
n
375
CYS
451
A
ARG
452
n
376
ARG
452
A
VAL
453
n
377
VAL
453
A
LEU
454
n
378
LEU
454
A
GLY
455
n
379
GLY
455
A
SER
456
n
380
SER
456
A
ASP
457
n
381
ASP
457
A
ALA
458
n
382
ALA
458
A
ALA
459
n
383
ALA
459
A
PRO
460
n
384
PRO
460
A
ARG
461
n
385
ARG
461
A
LEU
462
n
386
LEU
462
A
PHE
463
n
387
PHE
463
A
n
388
464
A
author_defined_assembly
1
monomeric
software_defined_assembly
PISA
3
trimeric
4680
-107
49030
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-y+1,x-y,z
crystal symmetry operation
148.7530000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_665
-x+y+1,-x+1,z
crystal symmetry operation
74.3765000000
128.8238768891
0.0000000000
A
O
TYR
349
A
O
TYR
273
A
N
LEU
336
A
N
LEU
260
A
N
ALA
340
A
N
ALA
264
A
O
ARG
418
A
O
ARG
342
A
N
ALA
413
A
N
ALA
337
A
O
ARG
142
A
O
ARG
66
A
O
TYR
349
A
O
TYR
273
A
N
LEU
336
A
N
LEU
260
A
N
ALA
340
A
N
ALA
264
A
O
ARG
418
A
O
ARG
342
A
O
ALA
417
A
O
ALA
341
A
N
ILE
400
A
N
ILE
324
A
O
THR
168
A
O
THR
92
A
N
VAL
178
A
N
VAL
102
A
O
THR
205
A
O
THR
129
A
N
VAL
202
A
N
VAL
126
A
O
THR
201
A
O
THR
125
A
N
VAL
230
A
N
VAL
154
A
N
LEU
231
A
N
LEU
155
A
O
ARG
241
A
O
ARG
165
A
N
CYS
260
A
N
CYS
184
A
O
LEU
277
A
O
LEU
201
A
N
GLY
278
A
N
GLY
202
A
O
GLY
307
A
O
GLY
231
A
N
LEU
310
A
N
LEU
234
A
O
VAL
363
A
O
VAL
287
A
N
VAL
364
A
N
VAL
288
A
O
LEU
388
A
O
LEU
312
A
O
ILE
389
A
O
ILE
313
A
N
VAL
436
A
N
VAL
360
1
A
HOH
479
D
HOH
1
A
GLY
464
A
GLY
388
1
Y
1
A
A
O
O
HOH
HOH
505
556
2.17
1
A
A
O
O
HOH
HOH
503
596
2.18
1
5.92
0.90
118.30
124.22
A
A
A
CB
CG
OD1
ASP
ASP
ASP
98
98
98
N
1
-6.58
0.90
118.30
111.72
A
A
A
CB
CG
OD2
ASP
ASP
ASP
98
98
98
N
1
3.12
0.50
120.30
123.42
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
110
110
110
N
1
-6.37
0.90
118.30
111.93
A
A
A
CB
CG
OD2
ASP
ASP
ASP
127
127
127
N
1
5.74
0.50
120.30
126.04
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
130
130
130
N
1
-5.75
0.50
120.30
114.55
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
130
130
130
N
1
6.03
0.50
120.30
126.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
148
148
148
N
1
-5.52
0.50
120.30
114.78
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
148
148
148
N
1
3.83
0.50
120.30
124.13
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
194
194
194
N
1
-6.52
0.90
118.30
111.78
A
A
A
CB
CG
OD2
ASP
ASP
ASP
197
197
197
N
1
8.24
0.90
118.30
126.54
A
A
A
CB
CG
OD1
ASP
ASP
ASP
217
217
217
N
1
-6.47
0.90
118.30
111.83
A
A
A
CB
CG
OD2
ASP
ASP
ASP
217
217
217
N
1
-6.49
0.90
118.30
111.81
A
A
A
CB
CG
OD2
ASP
ASP
ASP
224
224
224
N
1
-20.89
2.10
128.40
107.51
A
A
A
C
N
CD
PRO
PRO
PRO
269
270
270
Y
1
4.45
0.50
120.30
124.75
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
281
281
281
N
1
-3.76
0.50
120.30
116.54
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
281
281
281
N
1
-6.47
0.90
118.30
111.83
A
A
A
CB
CG
OD2
ASP
ASP
ASP
311
311
311
N
1
5.60
0.50
120.30
125.90
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
313
313
313
N
1
-5.90
0.90
118.30
112.40
A
A
A
CB
CG
OD2
ASP
ASP
ASP
332
332
332
N
1
-8.41
0.90
118.30
109.89
A
A
A
CB
CG
OD2
ASP
ASP
ASP
335
335
335
N
1
3.52
0.50
120.30
123.82
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
346
346
346
N
1
8.28
0.90
118.30
126.58
A
A
A
CB
CG
OD1
ASP
ASP
ASP
357
357
357
N
1
-3.13
0.50
120.30
117.17
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
368
368
368
N
1
6.16
0.90
118.30
124.46
A
A
A
CB
CG
OD1
ASP
ASP
ASP
383
383
383
N
1
3.88
0.50
120.30
124.18
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
386
386
386
N
1
-3.24
0.50
120.30
117.06
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
386
386
386
N
1
13.88
2.10
111.80
125.68
A
A
A
CG
CD
NE
ARG
ARG
ARG
393
393
393
N
1
3.91
0.50
120.30
124.21
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
393
393
393
N
1
8.08
0.90
118.30
126.38
A
A
A
CB
CG
OD1
ASP
ASP
ASP
405
405
405
N
1
-8.84
0.90
118.30
109.46
A
A
A
CB
CG
OD2
ASP
ASP
ASP
405
405
405
N
1
6.40
0.90
118.30
124.70
A
A
A
CB
CG
OD1
ASP
ASP
ASP
408
408
408
N
1
-5.97
0.90
118.30
112.33
A
A
A
CB
CG
OD2
ASP
ASP
ASP
408
408
408
N
1
-11.46
1.90
111.40
99.94
A
A
A
CB
CA
C
VAL
VAL
VAL
414
414
414
N
1
4.24
0.50
120.30
124.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
418
418
418
N
1
-3.97
0.50
120.30
116.33
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
418
418
418
N
1
-6.13
0.90
118.30
112.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
426
426
426
N
1
6.41
0.90
118.30
124.71
A
A
A
CB
CG
OD1
ASP
ASP
ASP
439
439
439
N
1
-7.08
0.90
118.30
111.22
A
A
A
CB
CG
OD2
ASP
ASP
ASP
439
439
439
N
1
-3.06
0.50
120.30
117.24
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
461
461
461
N
1
A
A
CD
OE2
GLU
GLU
87
87
0.069
0.011
1.252
1.321
N
1
A
A
CD
OE2
GLU
GLU
111
111
0.066
0.011
1.252
1.318
N
1
A
A
CD
OE2
GLU
GLU
166
166
0.093
0.011
1.252
1.345
N
1
A
A
CD
OE2
GLU
GLU
222
222
0.089
0.011
1.252
1.341
N
1
A
A
CD
OE2
GLU
GLU
228
228
0.076
0.011
1.252
1.328
N
1
A
A
CD
OE2
GLU
GLU
392
392
0.068
0.011
1.252
1.320
N
1
A
A
CD
OE2
GLU
GLU
441
441
0.127
0.011
1.252
1.379
N
1
A
A
CD
OE2
GLU
GLU
448
448
0.087
0.011
1.252
1.339
N
1
A
A
O
O
HOH
HOH
513
513
1.84
1_555
5_555
1
A
A
OD1
OD1
ASP
ASP
439
439
1.89
1_555
10_545
1
A
LYS
99
-67.30
15.18
1
A
ASN
102
44.76
27.81
1
A
LEU
149
-68.81
13.59
1
A
ARG
154
-172.81
127.07
1
A
THR
156
178.70
-2.87
1
A
SER
159
-39.17
2.61
1
A
ASP
170
-56.10
174.32
1
A
LYS
190
-58.14
14.29
1
A
ASP
224
89.56
2.59
1
A
ALA
236
-113.75
70.07
1
A
ASN
239
-53.36
74.49
1
A
PRO
269
-53.09
175.74
1
A
ALA
273
-99.30
39.75
1
A
LYS
274
162.29
133.58
1
A
GLN
275
-83.20
47.87
1
A
ASN
314
39.11
49.77
1
A
SER
372
57.60
-119.23
1
A
LYS
429
-67.43
-75.48
1
A
PRO
440
-26.56
-29.41
0.318
0.22
2.1
30.0
2544
25542
25195
1
2.0
TNT library, bond lengths 0.02 bond angles 3.0
2.1
30.0
149
3020
10
0
2861
2.7
0.015
2.1
30.0
1FCF
224983
25542
-3.0
0.069
1
30.1
8.8
100
0.575
2.1
2.14
1
5
100
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
TNT
5E
PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE
PHOTOSYSTEM II D1 C-TERMINAL PROCESSING PROTEASE
1
N
N
2
N
N
2
N
N
3
N
N
A
THR
79
A
THR
3
HELX_P
A
TYR
96
A
TYR
20
1
1
18
A
SER
100
A
SER
24
HELX_P
A
GLN
104
A
GLN
28
5
2
5
A
SER
105
A
SER
29
HELX_P
A
GLU
117
A
GLU
41
1
3
13
A
ARG
121
A
ARG
45
HELX_P
A
VAL
135
A
VAL
59
1
4
15
A
SER
147
A
SER
71
HELX_P
A
LEU
152
A
LEU
76
1
5
6
A
ALA
188
A
ALA
112
HELX_P
A
GLY
192
A
GLY
116
5
6
5
A
SER
211
A
SER
135
HELX_P
A
GLN
220
A
GLN
144
1
7
10
A
ALA
264
A
ALA
188
HELX_P
A
LEU
268
A
LEU
192
5
8
5
A
ASN
288
A
ASN
212
HELX_P
A
GLY
304
A
GLY
228
1
9
17
A
LEU
319
A
LEU
243
HELX_P
A
VAL
331
A
VAL
255
1
10
13
A
SER
372
A
SER
296
HELX_P
A
SER
384
A
SER
308
1
11
13
A
ASP
426
A
ASP
350
HELX_P
A
GLY
431
A
GLY
355
1
12
6
A
ASP
446
A
ASP
370
HELX_P
A
SER
456
A
SER
380
1
13
11
disulf
2.083
A
CYS
260
A
SG
CYS
184
1_555
A
CYS
451
A
SG
CYS
375
1_555
HYDROLASE
D1 C-terminal processing protease, serine protease, serine-lysine catalytic dyad, PDZ domain, photosystem II, photosynthesis, x-ray crystal structure, HYDROLASE
O04073_SCEOB
UNP
1
78
O04073
MVTSEQLLFLEAWRAVDRAYVDKSFNGQSWFKLRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRFLEPSRLAALRRGT
AGSVTGVGLEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVEVVLHAPGA
PSNTRTLQLTRQKVTINPVTFTTCSNVAAAALPPGAAKQQLGYVRLATFNSNTTAAAQQAFTELSKQGVAGLVLDIRNNG
GGLFPAGVNVARMLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFG
KGLIQTVVDLSDGSGVAVTVARYQTPAGVDINKIGVSPDVQLDPEVLPTDLEGVCRVLGSDAAPRLFG
78
464
1FCF
78
464
O04073
A
1
2
388
1
initiating METHIONINE
MET
77
1FCF
A
O04073
UNP
1
4
4
2
4
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
A
GLY
344
A
GLY
268
A
SER
350
A
SER
274
A
ASP
335
A
ASP
259
A
ASP
341
A
ASP
265
A
GLY
411
A
GLY
335
A
GLN
420
A
GLN
344
A
ARG
142
A
ARG
66
A
LEU
144
A
LEU
68
A
GLY
344
A
GLY
268
A
SER
350
A
SER
274
A
ASP
335
A
ASP
259
A
ASP
341
A
ASP
265
A
GLY
411
A
GLY
335
A
GLN
420
A
GLN
344
A
LEU
399
A
LEU
323
A
ASP
405
A
ASP
329
A
LEU
165
A
LEU
89
A
TYR
169
A
TYR
93
A
VAL
177
A
VAL
101
A
PRO
182
A
PRO
106
A
THR
205
A
THR
129
A
ALA
206
A
ALA
130
A
VAL
198
A
VAL
122
A
VAL
202
A
VAL
126
A
GLN
226
A
GLN
150
A
HIS
232
A
HIS
156
A
THR
240
A
THR
164
A
THR
246
A
THR
170
A
VAL
255
A
VAL
179
A
CYS
260
A
CYS
184
A
LEU
277
A
LEU
201
A
LEU
282
A
LEU
206
A
GLY
307
A
GLY
231
A
ASP
311
A
ASP
235
A
LEU
362
A
LEU
286
A
VAL
366
A
VAL
290
A
LEU
388
A
LEU
312
A
GLY
391
A
GLY
315
A
VAL
436
A
VAL
360
A
GLN
437
A
GLN
361
BINDING SITE FOR RESIDUE SO4 A 465
Software
6
BINDING SITE FOR RESIDUE SO4 A 466
Software
3
A
ARG
121
A
ARG
45
6
2_655
A
ARG
122
A
ARG
46
6
2_655
A
ALA
123
A
ALA
47
6
2_655
A
PRO
184
A
PRO
108
6
1_555
A
HOH
474
D
HOH
6
1_555
A
HOH
526
D
HOH
6
1_555
A
ARG
90
A
ARG
14
3
1_555
A
LYS
108
A
LYS
32
3
5_555
A
ARG
110
A
ARG
34
3
1_555
155
H 3 2