0.016725
0.000000
0.000000
0.000000
0.016725
0.000000
0.000000
0.000000
0.006423
0.000000
0.000000
0.000000
Klaholz, B.P.
Moras, D.
Structural Proteomics in Europe (SPINE)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
59.789
59.789
155.688
C26 H27 N O3
401.497
6-[HYDROXYIMINO-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALEN-2-YL)-METHYL]-NAPHTALENE-2-CARBOXYLIC ACID
SR11254
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C24 H46 O11
510.615
DODECYL-ALPHA-D-MALTOSIDE
D-saccharide
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
N
9
N
C
N
10
N
C
N
11
N
C
N
12
N
C
Y
13
N
C
N
14
N
C
N
15
N
C
N
16
N
C
N
17
N
C
N
18
N
O
N
19
N
O
Y
20
N
C
Y
21
N
C
Y
22
N
C
Y
23
N
C
Y
24
N
C
Y
25
N
C
Y
26
N
C
Y
27
N
C
N
28
N
C
N
29
N
N
N
30
N
O
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
N
N
79
N
C
N
80
N
N
N
81
N
N
N
82
N
O
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
O
N
105
N
N
N
106
N
O
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
N
N
116
S
C
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
C
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
R
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
S
N
137
N
O
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
N
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
Y
199
N
C
Y
200
N
N
Y
201
N
C
Y
202
N
C
Y
203
N
N
N
204
N
O
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
N
N
219
S
C
N
220
N
C
N
221
N
O
N
222
S
C
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
R
C
N
263
R
C
N
264
S
C
N
265
S
C
N
266
R
C
N
267
N
C
N
268
N
O
N
269
N
O
N
270
N
O
N
271
N
O
N
272
N
O
N
273
N
O
N
274
S
C
N
275
R
C
N
276
R
C
N
277
S
C
N
278
R
C
N
279
N
C
N
280
N
O
N
281
N
O
N
282
N
O
N
283
N
O
N
284
N
O
N
285
N
C
N
286
N
C
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
N
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
N
373
N
C
N
374
N
S
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
N
N
412
S
C
N
413
N
C
N
414
N
O
N
415
N
C
N
416
N
C
N
417
N
C
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
N
C
N
433
N
O
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
R
C
N
447
N
O
N
448
N
C
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
N
N
460
S
C
N
461
N
C
N
462
N
O
N
463
N
C
Y
464
N
C
Y
465
N
C
Y
466
N
C
Y
467
N
N
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
N
473
N
O
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
N
N
487
S
C
N
488
N
C
N
489
N
O
N
490
N
C
Y
491
N
C
Y
492
N
C
Y
493
N
C
Y
494
N
C
Y
495
N
C
Y
496
N
C
N
497
N
O
N
498
N
O
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
N
N
511
S
C
N
512
N
C
N
513
N
O
N
514
N
C
N
515
N
C
N
516
N
C
N
517
N
O
N
518
N
H
N
519
N
H
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
1
N
sing
N
2
N
doub
N
3
N
sing
Y
4
N
doub
Y
5
N
sing
Y
6
N
sing
N
7
N
sing
Y
8
N
doub
N
9
N
sing
Y
10
N
sing
Y
11
N
sing
Y
12
N
doub
Y
13
N
sing
N
14
N
sing
N
15
N
sing
Y
16
N
doub
Y
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
Y
44
N
doub
N
45
N
sing
Y
46
N
sing
N
47
N
sing
Y
48
N
doub
N
49
N
sing
N
50
N
sing
Y
51
N
doub
Y
52
N
sing
N
53
N
sing
N
54
N
sing
Y
55
N
doub
N
56
N
sing
N
57
N
sing
N
58
Z
doub
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
doub
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
doub
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
doub
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
doub
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
doub
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
Y
200
N
sing
Y
201
N
doub
Y
202
N
doub
N
203
N
sing
Y
204
N
sing
N
205
N
sing
Y
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
doub
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
Y
390
N
doub
Y
391
N
sing
Y
392
N
sing
N
393
N
sing
Y
394
N
doub
N
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
doub
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
doub
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
doub
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
Y
459
N
doub
Y
460
N
sing
Y
461
N
sing
N
462
N
sing
Y
463
N
doub
Y
464
N
sing
Y
465
N
sing
N
466
N
sing
Y
467
N
sing
Y
468
N
doub
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
doub
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
Y
487
N
doub
Y
488
N
sing
Y
489
N
sing
N
490
N
sing
Y
491
N
doub
N
492
N
sing
Y
493
N
doub
N
494
N
sing
Y
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
doub
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
UK
Structure
STRUE6
2005
0969-2126
10
1197
1204
10.1016/S0969-2126(02)00828-6
12220491
C-H...O hydrogen bonds in the nuclear receptor RARgamma--a potential tool for drug selectivity.
2002
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
97
6322
6327
10.1073/pnas.97.12.6322
Enantiomer discrimination illustrated by high-resolution crystal structures of the human nuclear receptor hRARgamma.
2000
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
5
199
202
Conformational adaptation of agonists to the human nuclear receptor hRARgamma.
1998
UK
Nature
NATUAS
0006
0028-0836
378
681
689
10.1038/378681a0
Crystal structure of the RARgamma ligand-binding domain bound to all-trans retinoic acid.
1995
10.2210/pdb1fd0/pdb
pdb_00001fd0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1998-07-11
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.8345
1.0
BW7B
EMBL/DESY, HAMBURG
0.8345
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7B
COMPLEXED WITH SR11254, RESIDUE 254
26535.070
RETINOIC ACID RECEPTOR GAMMA-1
LIGAND BINDING DOMAIN
1
man
polymer
401.497
6-[HYDROXYIMINO-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALEN-2-YL)-METHYL]-NAPHTALENE-2-CARBOXYLIC ACID
1
syn
non-polymer
510.615
DODECYL-ALPHA-D-MALTOSIDE
1
syn
non-polymer
18.015
water
331
nat
water
RAR-GAMMA-1
no
no
SPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITL
LKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRM
DLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE
SPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITL
LKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRM
DLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE
A
IGBMC-0078-000
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
9606
Homo sapiens
562
Escherichia coli
PLASMID
PET-15B
1
2.20
44.1
VAPOR DIFFUSION, HANGING DROP
7.0
sodium acetate, pH 7.0, VAPOR DIFFUSION, HANGING DROP at 290K
290
Structural Proteomics in Europe
SPINE
diffrn_source
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2002-09-27
1
1
2008-04-27
1
2
2011-07-13
1
3
2019-07-24
1
4
2023-08-09
_diffrn_source.pdbx_synchrotron_site
_software.classification
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
contains the same protein complexed with all-trans retinoic acid
contains the same protein complexed with 9-cis retinoic acid
contains the same protein complexed with the retinoid BMS270394
contains the same protein complexed with the retinoid BMS270395
contains the same protein complexed with the retinoid BMS181156
contains the same protein complexed with the retinoid CD564
contains the same protein complexed with the retinoid BMS184394
Y
RCSB
Y
RCSB
2000-07-19
REL
REL
254
6-[HYDROXYIMINO-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALEN-2-YL)-METHYL]-NAPHTALENE-2-CARBOXYLIC ACID
LMU
DODECYL-ALPHA-D-MALTOSIDE
HOH
water
1FCY
PDB
experimental model
254
450
2
254
254
450
A
LMU
451
3
LMU
LMU
451
A
HOH
501
4
HOH
HOH
501
A
HOH
502
4
HOH
HOH
502
A
HOH
503
4
HOH
HOH
503
A
HOH
504
4
HOH
HOH
504
A
HOH
505
4
HOH
HOH
505
A
HOH
506
4
HOH
HOH
506
A
HOH
507
4
HOH
HOH
507
A
HOH
508
4
HOH
HOH
508
A
HOH
509
4
HOH
HOH
509
A
HOH
510
4
HOH
HOH
510
A
HOH
511
4
HOH
HOH
511
A
HOH
512
4
HOH
HOH
512
A
HOH
513
4
HOH
HOH
513
A
HOH
514
4
HOH
HOH
514
A
HOH
515
4
HOH
HOH
515
A
HOH
516
4
HOH
HOH
516
A
HOH
517
4
HOH
HOH
517
A
HOH
518
4
HOH
HOH
518
A
HOH
519
4
HOH
HOH
519
A
HOH
520
4
HOH
HOH
520
A
HOH
521
4
HOH
HOH
521
A
HOH
522
4
HOH
HOH
522
A
HOH
523
4
HOH
HOH
523
A
HOH
524
4
HOH
HOH
524
A
HOH
525
4
HOH
HOH
525
A
HOH
526
4
HOH
HOH
526
A
HOH
527
4
HOH
HOH
527
A
HOH
528
4
HOH
HOH
528
A
HOH
529
4
HOH
HOH
529
A
HOH
530
4
HOH
HOH
530
A
HOH
531
4
HOH
HOH
531
A
HOH
532
4
HOH
HOH
532
A
HOH
533
4
HOH
HOH
533
A
HOH
534
4
HOH
HOH
534
A
HOH
535
4
HOH
HOH
535
A
HOH
536
4
HOH
HOH
536
A
HOH
537
4
HOH
HOH
537
A
HOH
538
4
HOH
HOH
538
A
HOH
539
4
HOH
HOH
539
A
HOH
540
4
HOH
HOH
540
A
HOH
541
4
HOH
HOH
541
A
HOH
542
4
HOH
HOH
542
A
HOH
543
4
HOH
HOH
543
A
HOH
544
4
HOH
HOH
544
A
HOH
545
4
HOH
HOH
545
A
HOH
546
4
HOH
HOH
546
A
HOH
547
4
HOH
HOH
547
A
HOH
548
4
HOH
HOH
548
A
HOH
549
4
HOH
HOH
549
A
HOH
550
4
HOH
HOH
550
A
HOH
551
4
HOH
HOH
551
A
HOH
552
4
HOH
HOH
552
A
HOH
553
4
HOH
HOH
553
A
HOH
554
4
HOH
HOH
554
A
HOH
555
4
HOH
HOH
555
A
HOH
556
4
HOH
HOH
556
A
HOH
557
4
HOH
HOH
557
A
HOH
558
4
HOH
HOH
558
A
HOH
559
4
HOH
HOH
559
A
HOH
560
4
HOH
HOH
560
A
HOH
561
4
HOH
HOH
561
A
HOH
562
4
HOH
HOH
562
A
HOH
563
4
HOH
HOH
563
A
HOH
564
4
HOH
HOH
564
A
HOH
565
4
HOH
HOH
565
A
HOH
566
4
HOH
HOH
566
A
HOH
567
4
HOH
HOH
567
A
HOH
568
4
HOH
HOH
568
A
HOH
569
4
HOH
HOH
569
A
HOH
570
4
HOH
HOH
570
A
HOH
571
4
HOH
HOH
571
A
HOH
572
4
HOH
HOH
572
A
HOH
573
4
HOH
HOH
573
A
HOH
574
4
HOH
HOH
574
A
HOH
575
4
HOH
HOH
575
A
HOH
576
4
HOH
HOH
576
A
HOH
577
4
HOH
HOH
577
A
HOH
578
4
HOH
HOH
578
A
HOH
579
4
HOH
HOH
579
A
HOH
580
4
HOH
HOH
580
A
HOH
581
4
HOH
HOH
581
A
HOH
582
4
HOH
HOH
582
A
HOH
583
4
HOH
HOH
583
A
HOH
584
4
HOH
HOH
584
A
HOH
585
4
HOH
HOH
585
A
HOH
586
4
HOH
HOH
586
A
HOH
587
4
HOH
HOH
587
A
HOH
588
4
HOH
HOH
588
A
HOH
589
4
HOH
HOH
589
A
HOH
590
4
HOH
HOH
590
A
HOH
591
4
HOH
HOH
591
A
HOH
592
4
HOH
HOH
592
A
HOH
593
4
HOH
HOH
593
A
HOH
594
4
HOH
HOH
594
A
HOH
595
4
HOH
HOH
595
A
HOH
596
4
HOH
HOH
596
A
HOH
597
4
HOH
HOH
597
A
HOH
598
4
HOH
HOH
598
A
HOH
599
4
HOH
HOH
599
A
HOH
600
4
HOH
HOH
600
A
HOH
601
4
HOH
HOH
601
A
HOH
602
4
HOH
HOH
602
A
HOH
603
4
HOH
HOH
603
A
HOH
604
4
HOH
HOH
604
A
HOH
605
4
HOH
HOH
605
A
HOH
606
4
HOH
HOH
606
A
HOH
607
4
HOH
HOH
607
A
HOH
608
4
HOH
HOH
608
A
HOH
609
4
HOH
HOH
609
A
HOH
610
4
HOH
HOH
610
A
HOH
611
4
HOH
HOH
611
A
HOH
612
4
HOH
HOH
612
A
HOH
613
4
HOH
HOH
613
A
HOH
614
4
HOH
HOH
614
A
HOH
615
4
HOH
HOH
615
A
HOH
616
4
HOH
HOH
616
A
HOH
617
4
HOH
HOH
617
A
HOH
618
4
HOH
HOH
618
A
HOH
619
4
HOH
HOH
619
A
HOH
620
4
HOH
HOH
620
A
HOH
621
4
HOH
HOH
621
A
HOH
622
4
HOH
HOH
622
A
HOH
623
4
HOH
HOH
623
A
HOH
624
4
HOH
HOH
624
A
HOH
625
4
HOH
HOH
625
A
HOH
626
4
HOH
HOH
626
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
629
4
HOH
HOH
629
A
HOH
630
4
HOH
HOH
630
A
HOH
631
4
HOH
HOH
631
A
HOH
632
4
HOH
HOH
632
A
HOH
633
4
HOH
HOH
633
A
HOH
634
4
HOH
HOH
634
A
HOH
635
4
HOH
HOH
635
A
HOH
636
4
HOH
HOH
636
A
HOH
637
4
HOH
HOH
637
A
HOH
638
4
HOH
HOH
638
A
HOH
639
4
HOH
HOH
639
A
HOH
640
4
HOH
HOH
640
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
646
4
HOH
HOH
646
A
HOH
647
4
HOH
HOH
647
A
HOH
648
4
HOH
HOH
648
A
HOH
649
4
HOH
HOH
649
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
652
4
HOH
HOH
652
A
HOH
653
4
HOH
HOH
653
A
HOH
654
4
HOH
HOH
654
A
HOH
655
4
HOH
HOH
655
A
HOH
656
4
HOH
HOH
656
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
663
4
HOH
HOH
663
A
HOH
664
4
HOH
HOH
664
A
HOH
665
4
HOH
HOH
665
A
HOH
666
4
HOH
HOH
666
A
HOH
667
4
HOH
HOH
667
A
HOH
668
4
HOH
HOH
668
A
HOH
669
4
HOH
HOH
669
A
HOH
670
4
HOH
HOH
670
A
HOH
671
4
HOH
HOH
671
A
HOH
672
4
HOH
HOH
672
A
HOH
673
4
HOH
HOH
673
A
HOH
674
4
HOH
HOH
674
A
HOH
675
4
HOH
HOH
675
A
HOH
676
4
HOH
HOH
676
A
HOH
677
4
HOH
HOH
677
A
HOH
678
4
HOH
HOH
678
A
HOH
679
4
HOH
HOH
679
A
HOH
680
4
HOH
HOH
680
A
HOH
681
4
HOH
HOH
681
A
HOH
682
4
HOH
HOH
682
A
HOH
683
4
HOH
HOH
683
A
HOH
684
4
HOH
HOH
684
A
HOH
685
4
HOH
HOH
685
A
HOH
686
4
HOH
HOH
686
A
HOH
687
4
HOH
HOH
687
A
HOH
688
4
HOH
HOH
688
A
HOH
689
4
HOH
HOH
689
A
HOH
690
4
HOH
HOH
690
A
HOH
691
4
HOH
HOH
691
A
HOH
692
4
HOH
HOH
692
A
HOH
693
4
HOH
HOH
693
A
HOH
694
4
HOH
HOH
694
A
HOH
695
4
HOH
HOH
695
A
HOH
696
4
HOH
HOH
696
A
HOH
697
4
HOH
HOH
697
A
HOH
698
4
HOH
HOH
698
A
HOH
699
4
HOH
HOH
699
A
HOH
700
4
HOH
HOH
700
A
HOH
701
4
HOH
HOH
701
A
HOH
702
4
HOH
HOH
702
A
HOH
703
4
HOH
HOH
703
A
HOH
704
4
HOH
HOH
704
A
HOH
705
4
HOH
HOH
705
A
HOH
706
4
HOH
HOH
706
A
HOH
707
4
HOH
HOH
707
A
HOH
708
4
HOH
HOH
708
A
HOH
709
4
HOH
HOH
709
A
HOH
710
4
HOH
HOH
710
A
HOH
711
4
HOH
HOH
711
A
HOH
712
4
HOH
HOH
712
A
HOH
713
4
HOH
HOH
713
A
HOH
714
4
HOH
HOH
714
A
HOH
715
4
HOH
HOH
715
A
HOH
716
4
HOH
HOH
716
A
HOH
717
4
HOH
HOH
717
A
HOH
718
4
HOH
HOH
718
A
HOH
719
4
HOH
HOH
719
A
HOH
720
4
HOH
HOH
720
A
HOH
721
4
HOH
HOH
721
A
HOH
722
4
HOH
HOH
722
A
HOH
723
4
HOH
HOH
723
A
HOH
724
4
HOH
HOH
724
A
HOH
725
4
HOH
HOH
725
A
HOH
726
4
HOH
HOH
726
A
HOH
727
4
HOH
HOH
727
A
HOH
728
4
HOH
HOH
728
A
HOH
729
4
HOH
HOH
729
A
HOH
730
4
HOH
HOH
730
A
HOH
731
4
HOH
HOH
731
A
HOH
732
4
HOH
HOH
732
A
HOH
733
4
HOH
HOH
733
A
HOH
734
4
HOH
HOH
734
A
HOH
735
4
HOH
HOH
735
A
HOH
736
4
HOH
HOH
736
A
HOH
737
4
HOH
HOH
737
A
HOH
738
4
HOH
HOH
738
A
HOH
739
4
HOH
HOH
739
A
HOH
740
4
HOH
HOH
740
A
HOH
741
4
HOH
HOH
741
A
HOH
742
4
HOH
HOH
742
A
HOH
743
4
HOH
HOH
743
A
HOH
744
4
HOH
HOH
744
A
HOH
745
4
HOH
HOH
745
A
HOH
746
4
HOH
HOH
746
A
HOH
747
4
HOH
HOH
747
A
HOH
748
4
HOH
HOH
748
A
HOH
749
4
HOH
HOH
749
A
HOH
750
4
HOH
HOH
750
A
HOH
751
4
HOH
HOH
751
A
HOH
752
4
HOH
HOH
752
A
HOH
753
4
HOH
HOH
753
A
HOH
754
4
HOH
HOH
754
A
HOH
755
4
HOH
HOH
755
A
HOH
756
4
HOH
HOH
756
A
HOH
757
4
HOH
HOH
757
A
HOH
758
4
HOH
HOH
758
A
HOH
759
4
HOH
HOH
759
A
HOH
760
4
HOH
HOH
760
A
HOH
761
4
HOH
HOH
761
A
HOH
762
4
HOH
HOH
762
A
HOH
763
4
HOH
HOH
763
A
HOH
764
4
HOH
HOH
764
A
HOH
765
4
HOH
HOH
765
A
HOH
766
4
HOH
HOH
766
A
HOH
767
4
HOH
HOH
767
A
HOH
768
4
HOH
HOH
768
A
HOH
769
4
HOH
HOH
769
A
HOH
770
4
HOH
HOH
770
A
HOH
771
4
HOH
HOH
771
A
HOH
772
4
HOH
HOH
772
A
HOH
773
4
HOH
HOH
773
A
HOH
774
4
HOH
HOH
774
A
HOH
775
4
HOH
HOH
775
A
HOH
776
4
HOH
HOH
776
A
HOH
777
4
HOH
HOH
777
A
HOH
778
4
HOH
HOH
778
A
HOH
779
4
HOH
HOH
779
A
HOH
780
4
HOH
HOH
780
A
HOH
781
4
HOH
HOH
781
A
HOH
782
4
HOH
HOH
782
A
HOH
783
4
HOH
HOH
783
A
HOH
784
4
HOH
HOH
784
A
HOH
785
4
HOH
HOH
785
A
HOH
786
4
HOH
HOH
786
A
HOH
787
4
HOH
HOH
787
A
HOH
788
4
HOH
HOH
788
A
HOH
789
4
HOH
HOH
789
A
HOH
790
4
HOH
HOH
790
A
HOH
791
4
HOH
HOH
791
A
HOH
792
4
HOH
HOH
792
A
HOH
793
4
HOH
HOH
793
A
HOH
794
4
HOH
HOH
794
A
HOH
795
4
HOH
HOH
795
A
HOH
796
4
HOH
HOH
796
A
HOH
797
4
HOH
HOH
797
A
HOH
798
4
HOH
HOH
798
A
HOH
799
4
HOH
HOH
799
A
HOH
800
4
HOH
HOH
800
A
HOH
801
4
HOH
HOH
801
A
HOH
802
4
HOH
HOH
802
A
HOH
803
4
HOH
HOH
803
A
HOH
804
4
HOH
HOH
804
A
HOH
805
4
HOH
HOH
805
A
HOH
806
4
HOH
HOH
806
A
HOH
807
4
HOH
HOH
807
A
HOH
808
4
HOH
HOH
808
A
HOH
809
4
HOH
HOH
809
A
HOH
810
4
HOH
HOH
810
A
HOH
811
4
HOH
HOH
811
A
HOH
812
4
HOH
HOH
812
A
HOH
813
4
HOH
HOH
813
A
HOH
814
4
HOH
HOH
814
A
HOH
815
4
HOH
HOH
815
A
HOH
816
4
HOH
HOH
816
A
HOH
817
4
HOH
HOH
817
A
HOH
818
4
HOH
HOH
818
A
HOH
819
4
HOH
HOH
819
A
HOH
820
4
HOH
HOH
820
A
HOH
821
4
HOH
HOH
821
A
HOH
822
4
HOH
HOH
822
A
HOH
823
4
HOH
HOH
823
A
HOH
824
4
HOH
HOH
824
A
HOH
825
4
HOH
HOH
825
A
HOH
826
4
HOH
HOH
826
A
HOH
827
4
HOH
HOH
827
A
HOH
828
4
HOH
HOH
828
A
HOH
829
4
HOH
HOH
829
A
HOH
830
4
HOH
HOH
830
A
HOH
831
4
HOH
HOH
831
A
SER
183
n
1
SER
183
A
PRO
184
n
2
PRO
184
A
GLN
185
n
3
GLN
185
A
LEU
186
n
4
LEU
186
A
GLU
187
n
5
GLU
187
A
GLU
188
n
6
GLU
188
A
LEU
189
n
7
LEU
189
A
ILE
190
n
8
ILE
190
A
THR
191
n
9
THR
191
A
LYS
192
n
10
LYS
192
A
VAL
193
n
11
VAL
193
A
SER
194
n
12
SER
194
A
LYS
195
n
13
LYS
195
A
ALA
196
n
14
ALA
196
A
HIS
197
n
15
HIS
197
A
GLN
198
n
16
GLN
198
A
GLU
199
n
17
GLU
199
A
THR
200
n
18
THR
200
A
PHE
201
n
19
PHE
201
A
PRO
202
n
20
PRO
202
A
SER
203
n
21
SER
203
A
LEU
204
n
22
LEU
204
A
CYS
205
n
23
CYS
205
A
GLN
206
n
24
GLN
206
A
LEU
207
n
25
LEU
207
A
GLY
208
n
26
GLY
208
A
LYS
209
n
27
LYS
209
A
TYR
210
n
28
TYR
210
A
THR
211
n
29
THR
211
A
THR
212
n
30
THR
212
A
ASN
213
n
31
ASN
213
A
SER
214
n
32
SER
214
A
SER
215
n
33
SER
215
A
ALA
216
n
34
ALA
216
A
ASP
217
n
35
ASP
217
A
HIS
218
n
36
HIS
218
A
ARG
219
n
37
ARG
219
A
VAL
220
n
38
VAL
220
A
GLN
221
n
39
GLN
221
A
LEU
222
n
40
LEU
222
A
ASP
223
n
41
ASP
223
A
LEU
224
n
42
LEU
224
A
GLY
225
n
43
GLY
225
A
LEU
226
n
44
LEU
226
A
TRP
227
n
45
TRP
227
A
ASP
228
n
46
ASP
228
A
LYS
229
n
47
LYS
229
A
PHE
230
n
48
PHE
230
A
SER
231
n
49
SER
231
A
GLU
232
n
50
GLU
232
A
LEU
233
n
51
LEU
233
A
ALA
234
n
52
ALA
234
A
THR
235
n
53
THR
235
A
LYS
236
n
54
LYS
236
A
CYS
237
n
55
CYS
237
A
ILE
238
n
56
ILE
238
A
ILE
239
n
57
ILE
239
A
LYS
240
n
58
LYS
240
A
ILE
241
n
59
ILE
241
A
VAL
242
n
60
VAL
242
A
GLU
243
n
61
GLU
243
A
PHE
244
n
62
PHE
244
A
ALA
245
n
63
ALA
245
A
LYS
246
n
64
LYS
246
A
ARG
247
n
65
ARG
247
A
LEU
248
n
66
LEU
248
A
PRO
249
n
67
PRO
249
A
GLY
250
n
68
GLY
250
A
PHE
251
n
69
PHE
251
A
THR
252
n
70
THR
252
A
GLY
253
n
71
GLY
253
A
LEU
254
n
72
LEU
254
A
SER
255
n
73
SER
255
A
ILE
256
n
74
ILE
256
A
ALA
257
n
75
ALA
257
A
ASP
258
n
76
ASP
258
A
GLN
259
n
77
GLN
259
A
ILE
260
n
78
ILE
260
A
THR
261
n
79
THR
261
A
LEU
262
n
80
LEU
262
A
LEU
263
n
81
LEU
263
A
LYS
264
n
82
LYS
264
A
ALA
265
n
83
ALA
265
A
ALA
266
n
84
ALA
266
A
CYS
267
n
85
CYS
267
A
LEU
268
n
86
LEU
268
A
ASP
269
n
87
ASP
269
A
ILE
270
n
88
ILE
270
A
LEU
271
n
89
LEU
271
A
MET
272
n
90
MET
272
A
LEU
273
n
91
LEU
273
A
ARG
274
n
92
ARG
274
A
ILE
275
n
93
ILE
275
A
CYS
276
n
94
CYS
276
A
THR
277
n
95
THR
277
A
ARG
278
n
96
ARG
278
A
TYR
279
n
97
TYR
279
A
THR
280
n
98
THR
280
A
PRO
281
n
99
PRO
281
A
GLU
282
n
100
GLU
282
A
GLN
283
n
101
GLN
283
A
ASP
284
n
102
ASP
284
A
THR
285
n
103
THR
285
A
MET
286
n
104
MET
286
A
THR
287
n
105
THR
287
A
PHE
288
n
106
PHE
288
A
SER
289
n
107
SER
289
A
ASP
290
n
108
ASP
290
A
GLY
291
n
109
GLY
291
A
LEU
292
n
110
LEU
292
A
THR
293
n
111
THR
293
A
LEU
294
n
112
LEU
294
A
ASN
295
n
113
ASN
295
A
ARG
296
n
114
ARG
296
A
THR
297
n
115
THR
297
A
GLN
298
n
116
GLN
298
A
MET
299
n
117
MET
299
A
HIS
300
n
118
HIS
300
A
ASN
301
n
119
ASN
301
A
ALA
302
n
120
ALA
302
A
GLY
303
n
121
GLY
303
A
PHE
304
n
122
PHE
304
A
GLY
305
n
123
GLY
305
A
PRO
306
n
124
PRO
306
A
LEU
307
n
125
LEU
307
A
THR
308
n
126
THR
308
A
ASP
309
n
127
ASP
309
A
LEU
310
n
128
LEU
310
A
VAL
311
n
129
VAL
311
A
PHE
312
n
130
PHE
312
A
ALA
313
n
131
ALA
313
A
PHE
314
n
132
PHE
314
A
ALA
315
n
133
ALA
315
A
GLY
316
n
134
GLY
316
A
GLN
317
n
135
GLN
317
A
LEU
318
n
136
LEU
318
A
LEU
319
n
137
LEU
319
A
PRO
320
n
138
PRO
320
A
LEU
321
n
139
LEU
321
A
GLU
322
n
140
GLU
322
A
MET
323
n
141
MET
323
A
ASP
324
n
142
ASP
324
A
ASP
325
n
143
ASP
325
A
THR
326
n
144
THR
326
A
GLU
327
n
145
GLU
327
A
THR
328
n
146
THR
328
A
GLY
329
n
147
GLY
329
A
LEU
330
n
148
LEU
330
A
LEU
331
n
149
LEU
331
A
SER
332
n
150
SER
332
A
ALA
333
n
151
ALA
333
A
ILE
334
n
152
ILE
334
A
CYS
335
n
153
CYS
335
A
LEU
336
n
154
LEU
336
A
ILE
337
n
155
ILE
337
A
CYS
338
n
156
CYS
338
A
GLY
339
n
157
GLY
339
A
ASP
340
n
158
ASP
340
A
ARG
341
n
159
ARG
341
A
MET
342
n
160
MET
342
A
ASP
343
n
161
ASP
343
A
LEU
344
n
162
LEU
344
A
GLU
345
n
163
GLU
345
A
GLU
346
n
164
GLU
346
A
PRO
347
n
165
PRO
347
A
GLU
348
n
166
GLU
348
A
LYS
349
n
167
LYS
349
A
VAL
350
n
168
VAL
350
A
ASP
351
n
169
ASP
351
A
LYS
352
n
170
LYS
352
A
LEU
353
n
171
LEU
353
A
GLN
354
n
172
GLN
354
A
GLU
355
n
173
GLU
355
A
PRO
356
n
174
PRO
356
A
LEU
357
n
175
LEU
357
A
LEU
358
n
176
LEU
358
A
GLU
359
n
177
GLU
359
A
ALA
360
n
178
ALA
360
A
LEU
361
n
179
LEU
361
A
ARG
362
n
180
ARG
362
A
LEU
363
n
181
LEU
363
A
TYR
364
n
182
TYR
364
A
ALA
365
n
183
ALA
365
A
ARG
366
n
184
ARG
366
A
ARG
367
n
185
ARG
367
A
ARG
368
n
186
ARG
368
A
ARG
369
n
187
ARG
369
A
PRO
370
n
188
PRO
370
A
SER
371
n
189
SER
371
A
GLN
372
n
190
GLN
372
A
PRO
373
n
191
PRO
373
A
TYR
374
n
192
TYR
374
A
MET
375
n
193
MET
375
A
PHE
376
n
194
PHE
376
A
PRO
377
n
195
PRO
377
A
ARG
378
n
196
ARG
378
A
MET
379
n
197
MET
379
A
LEU
380
n
198
LEU
380
A
MET
381
n
199
MET
381
A
LYS
382
n
200
LYS
382
A
ILE
383
n
201
ILE
383
A
THR
384
n
202
THR
384
A
ASP
385
n
203
ASP
385
A
LEU
386
n
204
LEU
386
A
ARG
387
n
205
ARG
387
A
GLY
388
n
206
GLY
388
A
ILE
389
n
207
ILE
389
A
SER
390
n
208
SER
390
A
THR
391
n
209
THR
391
A
LYS
392
n
210
LYS
392
A
GLY
393
n
211
GLY
393
A
ALA
394
n
212
ALA
394
A
GLU
395
n
213
GLU
395
A
ARG
396
n
214
ARG
396
A
ALA
397
n
215
ALA
397
A
ILE
398
n
216
ILE
398
A
THR
399
n
217
THR
399
A
LEU
400
n
218
LEU
400
A
LYS
401
n
219
LYS
401
A
MET
402
n
220
MET
402
A
GLU
403
n
221
GLU
403
A
ILE
404
n
222
ILE
404
A
PRO
405
n
223
PRO
405
A
GLY
406
n
224
GLY
406
A
PRO
407
n
225
PRO
407
A
MET
408
n
226
MET
408
A
PRO
409
n
227
PRO
409
A
PRO
410
n
228
PRO
410
A
LEU
411
n
229
LEU
411
A
ILE
412
n
230
ILE
412
A
ARG
413
n
231
ARG
413
A
GLU
414
n
232
GLU
414
A
MET
415
n
233
MET
415
A
LEU
416
n
234
LEU
416
A
GLU
417
n
235
GLU
417
A
0.1236000
0.1228000
0.1498000
2556
5.1
50280
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
280
A
N
THR
98
A
O
THR
285
A
O
THR
103
A
O
MET
286
A
O
MET
104
A
N
LEU
294
A
N
LEU
112
1
12.99
1.50
110.50
123.49
A
A
A
N
CA
CB
SER
SER
SER
183
183
183
N
1
11.51
1.70
113.60
125.11
A
A
A
CA
CB
CG
HIS
HIS
HIS
218
218
218
B
B
N
1
6.20
0.90
118.30
124.50
A
A
A
CB
CG
OD1
ASP
ASP
ASP
228
228
228
N
1
-7.03
0.50
120.30
113.27
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
247
247
247
N
1
4.08
0.50
120.30
124.38
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
296
296
296
N
1
-5.69
0.90
118.30
112.61
A
A
A
CB
CG
OD2
ASP
ASP
ASP
325
325
325
N
1
3.50
0.50
120.30
123.80
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
341
341
341
N
1
-6.13
0.90
118.30
112.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
351
351
351
N
1
A
SER
215
36.39
54.23
ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY 2.4%
0.1580000
0.1300000
0.1310000
0.1310000
1.38
6
21188
2910
58146
55236
26389
5.0
99.9
random
1
FREE R
0
0
MOLECULAR REPLACEMENT
1FCY
Engh & Huber
MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228
24
1935.00
2200.20
1.38
6
331
2351
76
0
1944
0.013
0.031
2.07
26.38
0.000
0.0249
0.073
0.077
0.023
0.004
0.038
0.093
19.7
1.38
20
1FD0
59004
59004
0.0420000
1
36.0
4.93
99.8
0.3620000
1.38
1.41
3.30
3852
4.0
99.8
refinement
SHELXL-97
data scaling
SCALEPACK
refinement
CNS
data reduction
DENZO
phasing
CNS
ISOTYPE SELECTIVITY OF THE HUMAN RETINOIC ACID NUCLEAR RECEPTOR HRAR: THE COMPLEX WITH THE RARGAMMA-SELECTIVE RETINOID SR11254
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
183
A
SER
1
HELX_P
A
PHE
201
A
PHE
19
1
1
19
A
ASP
223
A
ASP
41
HELX_P
A
ARG
247
A
ARG
65
1
2
25
A
GLY
250
A
GLY
68
HELX_P
A
LEU
254
A
LEU
72
5
3
5
A
SER
255
A
SER
73
HELX_P
A
THR
277
A
THR
95
1
4
23
A
ARG
296
A
ARG
114
HELX_P
A
GLY
303
A
GLY
121
1
5
8
A
PHE
304
A
PHE
122
HELX_P
A
PRO
306
A
PRO
124
5
6
3
A
LEU
307
A
LEU
125
HELX_P
A
LEU
319
A
LEU
137
1
7
13
A
PRO
320
A
PRO
138
HELX_P
A
GLU
322
A
GLU
140
5
8
3
A
ASP
324
A
ASP
142
HELX_P
A
ILE
337
A
ILE
155
1
9
14
A
GLU
346
A
GLU
164
HELX_P
A
ARG
369
A
ARG
187
1
10
24
A
TYR
374
A
TYR
192
HELX_P
A
MET
402
A
MET
220
1
11
29
A
PRO
409
A
PRO
227
HELX_P
A
GLU
417
A
GLU
235
1
12
9
GENE REGULATION
isotype selectivity, retinoid ligand complexes, drug design, antiparallel alpha-helical sandwich fold, CH...O hydrogen bond, Structural Proteomics in Europe, SPINE, Structural Genomics, GENE REGULATION
RARG1_HUMAN
UNP
1
183
P13631
SPQLEELITKVSKAHQETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLSIADQITL
LKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRM
DLEEPEKVDKLQEPLLEALRLYARRRRPSQPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLE
183
417
1FD0
183
417
P13631
A
1
1
235
3
anti-parallel
anti-parallel
A
TYR
279
A
TYR
97
A
THR
280
A
THR
98
A
THR
285
A
THR
103
A
THR
287
A
THR
105
A
THR
293
A
THR
111
A
ASN
295
A
ASN
113
BINDING SITE FOR RESIDUE 254 A 450
A
254
450
Software
15
BINDING SITE FOR RESIDUE LMU A 451
A
LMU
451
Software
18
A
PHE
201
A
PHE
19
15
1_555
A
PHE
230
A
PHE
48
15
1_555
A
ALA
234
A
ALA
52
15
1_555
A
CYS
237
A
CYS
55
15
1_555
A
LEU
271
A
LEU
89
15
1_555
A
MET
272
A
MET
90
15
1_555
A
ILE
275
A
ILE
93
15
1_555
A
ARG
278
A
ARG
96
15
1_555
A
PHE
288
A
PHE
106
15
1_555
A
SER
289
A
SER
107
15
1_555
A
GLY
303
A
GLY
121
15
1_555
A
PHE
304
A
PHE
122
15
1_555
A
LEU
400
A
LEU
218
15
1_555
A
ILE
412
A
ILE
230
15
1_555
A
HOH
549
D
HOH
15
1_555
A
LYS
240
A
LYS
58
18
1_555
A
GLU
243
A
GLU
61
18
1_555
A
LEU
263
A
LEU
81
18
1_555
A
CYS
267
A
CYS
85
18
1_555
A
ASP
340
A
ASP
158
18
5_656
A
GLN
354
A
GLN
172
18
5_656
A
PRO
377
A
PRO
195
18
5_656
A
LEU
380
A
LEU
198
18
5_656
A
ILE
383
A
ILE
201
18
5_656
A
THR
384
A
THR
202
18
5_656
A
ARG
387
A
ARG
205
18
5_656
A
MET
415
A
MET
233
18
1_555
A
HOH
561
D
HOH
18
5_656
A
HOH
607
D
HOH
18
1_555
A
HOH
648
D
HOH
18
5_656
A
HOH
688
D
HOH
18
1_555
A
HOH
747
D
HOH
18
1_555
A
HOH
782
D
HOH
18
1_555
92
tetragonal
P 41 21 2