1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Arnesano, F.
Banci, L.
Bertini, I.
Huffman, D.L.
O'Halloran, T.V.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 1
63.546
COPPER (I) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
40
1528
1539
10.1021/bi0014711
11327811
Solution structure of the Cu(I) and apo forms of the yeast metallochaperone, Atx1.
2001
10.2210/pdb1fd8/pdb
pdb_00001fd8
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8232.650
ATX1 COPPER CHAPERONE
1
man
polymer
63.546
COPPER (I) ION
1
syn
non-polymer
ATX1
no
no
MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQL
MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
Escherichia
sample
4932
Saccharomyces cerevisiae
562
Escherichia coli
PLASMID
PET11D
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_conn_angle
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-03-14
1
1
2007-10-21
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal Structure of the Hg(II) form of Atx1 Metallochaperone Protein at 1.02 A Resolution
RCSB
Y
RCSB
2000-07-20
REL
CU1
COPPER (I) ION
1
2D NOESY
3D NOESY-15N HMQC
HNHA
2D TOCSY
15N-1H 1J-modulated HSQC
100mM phosphate
7.0
ambient
298
K
1184 meaningful NOEs, 42 dihedral angle restraints and 60 1JHN residual dipolar couplings
simulated annealing, torsion angle dynamics, restrained energy minimization
minimized average structure
1.8mM Cu(I)-Atx1 15N; 100mM phosphate buffer NA; 90% H2O, 10% D2O
90% H2O/10% D2O
processing
XwinNMR
Eccles, Guentert, Billeter, Wuethrich
data analysis
XEASY
Guentert, Mumenthaler, Wuethrich
structure solution
DYANA
Borgias, Thomas, James
iterative matrix relaxation
CORMA
Case, Kollman et al.
refinement
Amber
6
800
Bruker
AVANCE
600
Bruker
AVANCE
500
Bruker
AVANCE
400
Bruker
AVANCE
CU1
74
2
CU1
CU1
74
A
MET
1
n
1
MET
1
A
ALA
2
n
2
ALA
2
A
GLU
3
n
3
GLU
3
A
ILE
4
n
4
ILE
4
A
LYS
5
n
5
LYS
5
A
HIS
6
n
6
HIS
6
A
TYR
7
n
7
TYR
7
A
GLN
8
n
8
GLN
8
A
PHE
9
n
9
PHE
9
A
ASN
10
n
10
ASN
10
A
VAL
11
n
11
VAL
11
A
VAL
12
n
12
VAL
12
A
MET
13
n
13
MET
13
A
THR
14
n
14
THR
14
A
CYS
15
n
15
CYS
15
A
SER
16
n
16
SER
16
A
GLY
17
n
17
GLY
17
A
CYS
18
n
18
CYS
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
ALA
21
n
21
ALA
21
A
VAL
22
n
22
VAL
22
A
ASN
23
n
23
ASN
23
A
LYS
24
n
24
LYS
24
A
VAL
25
n
25
VAL
25
A
LEU
26
n
26
LEU
26
A
THR
27
n
27
THR
27
A
LYS
28
n
28
LYS
28
A
LEU
29
n
29
LEU
29
A
GLU
30
n
30
GLU
30
A
PRO
31
n
31
PRO
31
A
ASP
32
n
32
ASP
32
A
VAL
33
n
33
VAL
33
A
SER
34
n
34
SER
34
A
LYS
35
n
35
LYS
35
A
ILE
36
n
36
ILE
36
A
ASP
37
n
37
ASP
37
A
ILE
38
n
38
ILE
38
A
SER
39
n
39
SER
39
A
LEU
40
n
40
LEU
40
A
GLU
41
n
41
GLU
41
A
LYS
42
n
42
LYS
42
A
GLN
43
n
43
GLN
43
A
LEU
44
n
44
LEU
44
A
VAL
45
n
45
VAL
45
A
ASP
46
n
46
ASP
46
A
VAL
47
n
47
VAL
47
A
TYR
48
n
48
TYR
48
A
THR
49
n
49
THR
49
A
THR
50
n
50
THR
50
A
LEU
51
n
51
LEU
51
A
PRO
52
n
52
PRO
52
A
TYR
53
n
53
TYR
53
A
ASP
54
n
54
ASP
54
A
PHE
55
n
55
PHE
55
A
ILE
56
n
56
ILE
56
A
LEU
57
n
57
LEU
57
A
GLU
58
n
58
GLU
58
A
LYS
59
n
59
LYS
59
A
ILE
60
n
60
ILE
60
A
LYS
61
n
61
LYS
61
A
LYS
62
n
62
LYS
62
A
THR
63
n
63
THR
63
A
GLY
64
n
64
GLY
64
A
LYS
65
n
65
LYS
65
A
GLU
66
n
66
GLU
66
A
VAL
67
n
67
VAL
67
A
ARG
68
n
68
ARG
68
A
SER
69
n
69
SER
69
A
GLY
70
n
70
GLY
70
A
LYS
71
n
71
LYS
71
A
GLN
72
n
72
GLN
72
A
LEU
73
n
73
LEU
73
A
author_defined_assembly
1
monomeric
A
CYS
15
A
SG
CYS
15
1_555
A
CU1
74
B
CU
CU1
1_555
A
CYS
15
A
N
CYS
15
1_555
79.7
A
CYS
15
A
SG
CYS
15
1_555
A
CU1
74
B
CU
CU1
1_555
A
CYS
18
A
SG
CYS
18
1_555
117.2
A
CYS
15
A
N
CYS
15
1_555
A
CU1
74
B
CU
CU1
1_555
A
CYS
18
A
SG
CYS
18
1_555
112.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
39
A
N
SER
39
A
O
LEU
44
A
O
LEU
44
A
O
THR
49
A
O
THR
49
A
N
LYS
5
A
N
LYS
5
A
O
ASN
10
A
O
ASN
10
A
N
ARG
68
A
N
ARG
68
1
A
ASP
32
-176.67
-50.06
1
A
GLN
43
34.82
50.50
1
A
ILE
60
-60.03
-70.36
minimized average
SOLUTION STRUCTURE OF THE CU(I) FORM OF THE YEAST METALLOCHAPERONE, ATX1
1
N
N
2
N
N
A
GLY
17
A
GLY
17
HELX_P
A
GLU
30
A
GLU
30
1
1
14
A
PRO
52
A
PRO
52
HELX_P
A
THR
63
A
THR
63
1
2
12
metalc
2.144
A
CYS
15
A
SG
CYS
15
1_555
A
CU1
74
B
CU
CU1
1_555
metalc
2.746
A
CYS
15
A
N
CYS
15
1_555
A
CU1
74
B
CU
CU1
1_555
metalc
2.118
A
CYS
18
A
SG
CYS
18
1_555
A
CU1
74
B
CU
CU1
1_555
METAL TRANSPORT
Metallochaperone, Atx1, HEAVY-METAL-ASSOCIATED DOMAIN, OXYGEN TOXICITY, metal transport
ATX1_YEAST
UNP
1
1
P38636
MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGKQL
1
73
1FD8
1
73
P38636
A
1
1
73
4
anti-parallel
anti-parallel
anti-parallel
A
LYS
35
A
LYS
35
A
SER
39
A
SER
39
A
LEU
44
A
LEU
44
A
THR
49
A
THR
49
A
LYS
5
A
LYS
5
A
VAL
11
A
VAL
11
A
VAL
67
A
VAL
67
A
LEU
73
A
LEU
73
BINDING SITE FOR RESIDUE CU1 A 74
A
CU1
74
Software
4
A
THR
14
A
THR
14
4
1_555
A
CYS
15
A
CYS
15
4
1_555
A
CYS
18
A
CYS
18
4
1_555
A
LYS
65
A
LYS
65
4
1_555
1
P 1