1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yeagle, P.L. Danis, C. Choi, G. Alderfer, J.L. Albert, A.D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Mol.Vis. 1090-0535 6 125 131 10930473 Three dimensional structure of the seventh transmembrane helical domain of the G-protein receptor, rhodopsin. 2000 10.2210/pdb1fdf/pdb pdb_00001fdf 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2954.488 RHODOPSIN HELIX 7, RESIDUES 291-315 1 syn polymer no no PAFFAKTSAVYNPVIYIMMNKQFRN PAFFAKTSAVYNPVIYIMMNKQFRN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 2000-07-27 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession intradiskal loop 1 of bovine rhodopsin intradiskal loop 2 of bovine rhodopsin intradiskal loop 3 of bovine rhodopsin amino terminal of bovine rhodopsin RCSB Y RCSB 2000-07-20 REL REL solid phase peptide synthesis sample target function 150 1 2D NOESY DQF-COSY 0 7 1 atm 303 K DIANA 1 fewest violations peptide DMSO Wuthrich structure solution DIANA 1 Wuthrich refinement DIANA 1 600 Bruker AMX PRO 1 n 1 PRO 1 A ALA 2 n 2 ALA 2 A PHE 3 n 3 PHE 3 A PHE 4 n 4 PHE 4 A ALA 5 n 5 ALA 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A SER 8 n 8 SER 8 A ALA 9 n 9 ALA 9 A VAL 10 n 10 VAL 10 A TYR 11 n 11 TYR 11 A ASN 12 n 12 ASN 12 A PRO 13 n 13 PRO 13 A VAL 14 n 14 VAL 14 A ILE 15 n 15 ILE 15 A TYR 16 n 16 TYR 16 A ILE 17 n 17 ILE 17 A MET 18 n 18 MET 18 A MET 19 n 19 MET 19 A ASN 20 n 20 ASN 20 A LYS 21 n 21 LYS 21 A GLN 22 n 22 GLN 22 A PHE 23 n 23 PHE 23 A ARG 24 n 24 ARG 24 A ASN 25 n 25 ASN 25 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A ALA VAL 9 10 -139.78 1 A A VAL ILE 14 15 108.80 1 A A MET ASN 19 20 143.62 1 A A ASN LYS 20 21 -137.30 1 A PHE 3 0.081 SIDE CHAIN 1 A PHE 4 0.063 SIDE CHAIN 1 A TYR 11 0.081 SIDE CHAIN 1 A TYR 16 0.154 SIDE CHAIN 1 -8.22 0.60 121.00 112.78 A A A CB CG CD1 TYR TYR TYR 11 11 11 N 1 -4.76 0.60 121.00 116.24 A A A CB CG CD1 TYR TYR TYR 16 16 16 N 1 -6.40 0.70 120.80 114.40 A A A CB CG CD2 PHE PHE PHE 23 23 23 N 1 5.11 0.70 120.80 125.91 A A A CB CG CD1 PHE PHE PHE 23 23 23 N 1 A ALA 5 -60.89 -77.32 1 A LYS 6 -23.54 -65.67 1 A VAL 10 -149.59 -37.88 1 A TYR 11 86.53 -37.74 1 A ASN 12 82.97 172.91 1 A PRO 13 -76.16 49.85 1 A VAL 14 -148.48 24.36 1 A ASN 20 -80.56 -144.26 1 A LYS 21 33.18 35.66 1 A GLN 22 52.15 88.74 1 A ARG 24 35.09 77.40 HELIX 7 BOVINE RHODOPSIN 1 N N A ALA 5 A ALA 5 HELX_P A VAL 10 A VAL 10 1 1 6 A MET 19 A MET 19 HELX_P A ASN 25 A ASN 25 1 2 7 SIGNALING PROTEIN helix, SIGNALING PROTEIN A ALA 2 A ALA 2 1 A PHE 3 A PHE 3 5.00 OPSD_BOVIN UNP 1 291 P02699 PAFFAKTSAVYNPVIYIMMNKQFRN 291 315 1FDF 1 25 P02699 A 1 1 25 1 P 1