1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Almeida, F.C.L.
Opella, S.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
270
481
495
10.1006/jmbi.1997.1114
9237913
fd coat protein structure in membrane environments: structural dynamics of the loop between the hydrophobic trans-membrane helix and the amphipathic in-plane helix.
1997
10.2210/pdb1fdm/pdb
pdb_00001fdm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
IN SDS MICELLES
5244.000
FD MAJOR COAT PROTEIN
1
nat
polymer
FD COAT PROTEIN
no
no
AEGDDPAKAAFDSLQASATEYIGYAWAMVVVIVGATIGIKLFKKFTSKAS
AEGDDPAKAAFDSLQASATEYIGYAWAMVVVIVGATIGIKLFKKFTSKAS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Inovirus
sample
10864
Enterobacteria phage fd
Enterobacteria phage M13
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1997-09-17
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1997-05-28
REL
REL
10 LOWEST ENERGY FOR EACH FAMILY OF STRUCTURE
220
20
3D NOESY-TOCSY-HNHA-D2O EXCHANGE
4.0
308
K
REFINEMENT DETAILS CAN BE FOUND IN THE PAPER CITED ON JRNL RECORDS ABOVE.
DISTANCE GEOMETRY-SIMULATED ANNEALING
BRUNGER
refinement
X-PLOR
3.1
structure solution
X-PLOR
500
Bruker
DMX500
600
Bruker
DMX600
750
Bruker
DMX750
ALA
1
n
1
ALA
1
A
GLU
2
n
2
GLU
2
A
GLY
3
n
3
GLY
3
A
ASP
4
n
4
ASP
4
A
ASP
5
n
5
ASP
5
A
PRO
6
n
6
PRO
6
A
ALA
7
n
7
ALA
7
A
LYS
8
n
8
LYS
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
PHE
11
n
11
PHE
11
A
ASP
12
n
12
ASP
12
A
SER
13
n
13
SER
13
A
LEU
14
n
14
LEU
14
A
GLN
15
n
15
GLN
15
A
ALA
16
n
16
ALA
16
A
SER
17
n
17
SER
17
A
ALA
18
n
18
ALA
18
A
THR
19
n
19
THR
19
A
GLU
20
n
20
GLU
20
A
TYR
21
n
21
TYR
21
A
ILE
22
n
22
ILE
22
A
GLY
23
n
23
GLY
23
A
TYR
24
n
24
TYR
24
A
ALA
25
n
25
ALA
25
A
TRP
26
n
26
TRP
26
A
ALA
27
n
27
ALA
27
A
MET
28
n
28
MET
28
A
VAL
29
n
29
VAL
29
A
VAL
30
n
30
VAL
30
A
VAL
31
n
31
VAL
31
A
ILE
32
n
32
ILE
32
A
VAL
33
n
33
VAL
33
A
GLY
34
n
34
GLY
34
A
ALA
35
n
35
ALA
35
A
THR
36
n
36
THR
36
A
ILE
37
n
37
ILE
37
A
GLY
38
n
38
GLY
38
A
ILE
39
n
39
ILE
39
A
LYS
40
n
40
LYS
40
A
LEU
41
n
41
LEU
41
A
PHE
42
n
42
PHE
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
PHE
45
n
45
PHE
45
A
THR
46
n
46
THR
46
A
SER
47
n
47
SER
47
A
LYS
48
n
48
LYS
48
A
ALA
49
n
49
ALA
49
A
SER
50
n
50
SER
50
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ASP
5
59.13
153.49
1
A
SER
13
-80.17
-74.83
1
A
ALA
16
-50.52
-82.94
1
A
ALA
18
-125.90
-92.47
1
A
THR
19
-176.31
-58.49
1
A
GLU
20
-52.06
-104.10
1
A
TYR
24
178.08
38.10
1
A
TRP
26
-35.84
-30.28
1
A
ALA
27
-130.83
-68.60
1
A
LYS
40
-73.90
-76.98
1
A
PHE
45
-175.51
32.45
1
A
SER
47
161.00
-89.63
1
A
ALA
49
-168.48
27.22
2
A
PRO
6
-78.66
-77.16
2
A
SER
13
-74.91
-77.04
2
A
ALA
16
-46.42
-88.02
2
A
ALA
18
-111.81
-90.12
2
A
THR
19
176.43
-55.22
2
A
GLU
20
-57.40
-108.43
2
A
ALA
25
-131.07
-35.28
2
A
SER
47
-97.79
-153.85
3
A
PRO
6
-80.37
41.22
3
A
ALA
7
-153.40
-69.40
3
A
ALA
9
-55.29
-80.22
3
A
SER
13
-69.34
-76.68
3
A
SER
17
-83.01
45.07
3
A
ALA
18
37.55
34.86
3
A
GLU
20
-176.89
-64.46
3
A
TYR
24
32.28
39.36
3
A
ALA
27
-133.63
-64.23
3
A
LYS
40
-79.10
-70.66
3
A
SER
47
-109.87
-60.55
4
A
GLU
2
57.40
-179.36
4
A
ASP
4
-166.75
84.01
4
A
SER
13
-76.27
-76.19
4
A
ALA
16
-48.93
-82.49
4
A
ALA
18
-107.42
-90.80
4
A
THR
19
175.34
-53.20
4
A
GLU
20
-49.56
-100.47
4
A
TYR
24
37.25
51.02
4
A
TRP
26
-37.35
-27.90
4
A
ALA
27
-129.49
-65.92
4
A
THR
46
178.09
40.59
4
A
SER
47
-166.71
-72.32
4
A
ALA
49
-126.50
-75.59
5
A
GLU
2
59.92
-164.65
5
A
ASP
4
50.91
96.01
5
A
ASP
5
-160.29
100.82
5
A
ALA
7
172.38
-26.48
5
A
LYS
8
-39.64
-33.07
5
A
SER
13
-70.75
-75.44
5
A
ALA
16
-49.44
-89.01
5
A
ALA
18
-121.44
-92.33
5
A
THR
19
-176.22
-52.33
5
A
GLU
20
-58.62
-111.81
5
A
ALA
27
-105.59
-66.25
5
A
LYS
40
-74.05
-72.89
5
A
PHE
45
170.81
36.24
5
A
LYS
48
-131.94
-50.01
5
A
ALA
49
-175.22
67.53
6
A
GLU
2
61.74
-175.04
6
A
ASP
5
161.92
161.85
6
A
ALA
7
70.94
41.53
6
A
SER
13
-72.86
-75.00
6
A
SER
17
-83.42
42.06
6
A
GLU
20
86.13
-53.53
6
A
TYR
21
-142.48
-48.45
6
A
ILE
22
132.07
34.05
6
A
TYR
24
36.03
46.38
6
A
ALA
27
-128.16
-67.14
6
A
THR
46
-172.08
44.15
7
A
GLU
2
72.25
150.20
7
A
PRO
6
-80.72
42.90
7
A
ALA
7
-173.09
-52.88
7
A
SER
13
-72.33
-71.25
7
A
ALA
16
-54.81
-86.83
7
A
ALA
18
-121.51
-90.06
7
A
THR
19
178.98
-51.87
7
A
GLU
20
-56.46
-108.97
7
A
TRP
26
-39.51
-27.25
7
A
ALA
27
-130.80
-62.75
7
A
SER
47
74.73
-2.23
7
A
LYS
48
-151.17
16.36
8
A
GLU
2
47.00
-167.32
8
A
ASP
4
-166.17
81.07
8
A
SER
13
-80.32
-77.12
8
A
ALA
16
-41.49
-77.70
8
A
THR
19
31.87
-93.44
8
A
GLU
20
-21.56
-110.88
8
A
TYR
24
34.77
40.08
8
A
TRP
26
-38.65
-24.68
8
A
ALA
27
-111.82
-70.86
8
A
LYS
40
-74.79
-77.12
8
A
PHE
45
75.19
46.14
8
A
THR
46
71.82
32.55
8
A
LYS
48
-154.80
18.77
8
A
ALA
49
-156.11
-71.08
9
A
ALA
9
-57.02
-85.07
9
A
SER
13
-73.53
-73.16
9
A
ALA
16
-54.25
-82.79
9
A
ALA
18
-137.87
-90.91
9
A
THR
19
-176.63
-57.89
9
A
GLU
20
-59.60
-114.84
9
A
TYR
24
-175.81
39.09
9
A
PHE
45
-83.15
31.94
9
A
THR
46
82.43
40.95
9
A
LYS
48
-155.16
19.78
9
A
ALA
49
61.58
61.14
10
A
ALA
7
75.47
32.78
10
A
ALA
9
-54.94
-82.54
10
A
SER
13
-73.52
-74.96
10
A
ALA
16
-45.53
-71.65
10
A
THR
19
44.27
-85.84
10
A
GLU
20
-36.39
-109.74
10
A
TYR
24
38.13
58.28
10
A
TRP
26
-39.13
-24.88
10
A
ALA
27
-122.05
-70.14
10
A
SER
47
-177.19
149.38
11
A
ALA
9
-59.48
-84.00
11
A
SER
13
-79.58
-80.89
11
A
LEU
14
-39.21
-29.34
11
A
GLU
20
-149.43
-48.72
11
A
TYR
21
173.28
-31.06
11
A
ALA
25
94.96
31.59
11
A
LYS
40
-70.54
-70.34
11
A
PHE
42
-80.92
-72.96
11
A
PHE
45
-145.22
10.19
12
A
ASP
4
48.47
91.12
12
A
ALA
9
-51.61
-72.86
12
A
SER
13
-69.05
-77.68
12
A
GLU
20
-140.52
-48.75
12
A
TYR
21
173.78
-32.48
12
A
ALA
25
103.64
22.44
12
A
THR
46
162.24
38.11
12
A
SER
47
-176.98
-151.04
12
A
ALA
49
-156.64
45.03
13
A
ASP
5
163.36
-52.95
13
A
SER
13
-69.20
-77.94
13
A
LEU
14
-39.96
-24.92
13
A
TYR
21
172.71
-32.67
13
A
ALA
25
101.49
27.86
13
A
VAL
29
-62.56
-73.50
13
A
PHE
45
-152.19
21.18
13
A
SER
47
81.71
-41.63
13
A
ALA
49
-81.14
-83.52
14
A
GLU
2
57.38
-168.07
14
A
ASP
5
-44.55
163.51
14
A
ALA
9
-47.59
-83.88
14
A
SER
13
-73.97
-77.94
14
A
LEU
14
-38.91
-35.14
14
A
SER
17
-81.46
31.13
14
A
GLU
20
-179.39
-55.05
14
A
TYR
21
172.33
-45.45
14
A
ALA
25
131.06
47.06
14
A
TRP
26
-156.79
16.69
14
A
THR
46
161.89
44.62
14
A
SER
47
41.95
28.84
14
A
LYS
48
-141.28
-46.93
14
A
ALA
49
-43.54
-76.66
15
A
ALA
7
-173.34
-38.78
15
A
SER
13
-78.57
-74.42
15
A
LEU
14
-38.93
-37.49
15
A
SER
17
-81.38
42.65
15
A
TYR
21
52.24
-0.65
15
A
TYR
24
-38.12
-26.33
15
A
ALA
25
129.46
52.51
15
A
TRP
26
-165.90
22.88
15
A
THR
46
76.65
32.11
15
A
SER
47
71.56
-151.09
16
A
ASP
5
-153.26
81.43
16
A
SER
13
-73.39
-76.75
16
A
LEU
14
-38.88
-36.67
16
A
ALA
16
-46.36
-18.96
16
A
SER
17
-81.47
42.34
16
A
TYR
21
53.57
-2.06
16
A
TYR
24
-37.55
-27.15
16
A
ALA
25
127.49
54.34
16
A
TRP
26
-165.33
24.97
16
A
LYS
40
-78.05
-75.61
16
A
PHE
45
163.59
58.60
16
A
SER
47
-45.91
-89.75
16
A
ALA
49
-146.98
25.82
17
A
ALA
7
-142.23
44.85
17
A
SER
13
-78.75
-78.48
17
A
LEU
14
-39.52
-33.86
17
A
GLU
20
-144.25
-46.55
17
A
TYR
21
167.50
-43.85
17
A
ALA
25
130.81
48.21
17
A
TRP
26
-160.87
21.55
17
A
LYS
40
-77.36
-73.28
17
A
THR
46
164.68
41.42
17
A
SER
47
-103.03
-80.35
17
A
ALA
49
160.10
35.18
18
A
PRO
6
-80.22
44.43
18
A
ALA
7
-144.29
-84.81
18
A
ALA
9
-53.49
-83.12
18
A
SER
13
-64.00
-76.01
18
A
LEU
14
-38.82
-32.66
18
A
SER
17
-81.11
37.11
18
A
GLU
20
-163.39
-55.80
18
A
TYR
21
174.56
-34.40
18
A
TYR
24
-38.64
-27.30
18
A
ALA
25
131.71
50.32
18
A
TRP
26
-162.82
22.04
18
A
ALA
49
-40.88
99.50
19
A
PRO
6
-78.55
-71.11
19
A
SER
13
-75.83
-78.15
19
A
LEU
14
-39.26
-25.02
19
A
ALA
18
66.80
72.33
19
A
TYR
21
150.67
-21.75
19
A
ILE
22
-103.36
76.18
19
A
ALA
25
85.11
33.12
19
A
LYS
40
-65.51
-71.24
19
A
PHE
42
-79.07
-71.14
19
A
THR
46
174.19
34.35
19
A
ALA
49
57.14
88.82
20
A
GLU
2
-112.55
65.89
20
A
ASP
4
59.20
94.85
20
A
ALA
7
-175.57
71.69
20
A
SER
13
-76.78
-77.07
20
A
LEU
14
-38.65
-34.50
20
A
ALA
16
-49.09
-16.64
20
A
SER
17
-81.24
40.24
20
A
TYR
21
53.92
-2.66
20
A
TYR
24
-37.84
-26.33
20
A
ALA
25
126.30
53.18
20
A
TRP
26
-162.36
22.97
20
A
THR
46
165.73
50.58
20
A
ALA
49
46.23
86.68
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
FD MAJOR COAT PROTEIN IN SDS MICELLES, NMR, 20 STRUCTURES
1
Y
N
A
LYS
8
A
LYS
8
HELX_P
A
ALA
16
A
ALA
16
1
1
9
A
MET
28
A
MET
28
HELX_P
A
LYS
43
A
LYS
43
1
2
16
VIRAL PROTEIN
FD COAT PROTEIN, MEMBRANE PROTEIN, MICELLES, COAT PROTEIN, Viral protein
COATB_BPFD
UNP
1
1
P69539
MKKSLVLKASVAVATLVPMLSFAAEGDDPAKAAFDSLQASATEYIGYAWAMVVVIVGATIGIKLFKKFTSKAS
24
73
1FDM
1
50
P69539
A
1
1
50
1
P 1