0.019520 0.000000 0.000000 0.000000 0.017227 0.000000 0.000000 0.000000 0.016372 0.00000 0.00000 0.00000 Mahalingam, B. Louis, J.M. Harrison, R.W. Weber, I.T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 51.230 58.050 61.080 C35 H68 N11 O8 1 770.983 N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide p2/NC peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N C N 4 N N N 5 S C N 6 N C N 7 N O N 8 R C N 9 N O N 10 N C N 11 N N N 12 S C N 13 N C N 14 N O N 15 S C N 16 N C N 17 N C N 18 N C N 19 N N N 20 S C N 21 N C N 22 N C N 23 N C N 24 N C N 25 N C N 26 N N N 27 S C N 28 N C N 29 N O N 30 N C N 31 N C N 32 N C N 33 N C N 34 N N N 35 S C N 36 N C N 37 N O N 38 N C N 39 N C N 40 N C N 41 N O N 42 N N N 43 N N N 44 S C N 45 N C N 46 N O N 47 N C N 48 N C N 49 N C N 50 N N N 51 N C N 52 N N N 53 N N N 54 N N N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C N 128 N O N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N N N 137 S C N 138 N C N 139 N O N 140 N C N 141 N C N 142 N C N 143 N N N 144 N C N 145 N N N 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N O N 170 N N N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N O N 187 N O N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N N N 197 R C N 198 N C N 199 N O N 200 N C N 201 N S N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C N 215 N C N 216 N C N 217 N O N 218 N N N 219 N O N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N C N 237 N O N 238 N O N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N N N 250 N C N 251 N C N 252 N O N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C Y 264 N C Y 265 N N Y 266 N C Y 267 N C Y 268 N N N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N O N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 S C N 288 N C N 289 N C N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N N N 328 S C N 329 N C N 330 N O N 331 N C N 332 N C N 333 N C N 334 N C N 335 N N N 336 N O N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 N C N 357 N C N 358 N S N 359 N C N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N N N 396 S C N 397 N C N 398 N O N 399 N C N 400 N C N 401 N C N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N N N 413 S C N 414 N C N 415 N O N 416 N C N 417 N O N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 R C N 431 N O N 432 N C N 433 N O N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C Y 448 N C Y 449 N C Y 450 N C Y 451 N N Y 452 N C Y 453 N C Y 454 N C Y 455 N C Y 456 N C N 457 N O N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N N N 471 S C N 472 N C N 473 N O N 474 N C Y 475 N C Y 476 N C Y 477 N C Y 478 N C Y 479 N C Y 480 N C N 481 N O N 482 N O N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N N N 495 S C N 496 N C N 497 N O N 498 N C N 499 N C N 500 N C N 501 N O N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N doub N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N doub N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N doub N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N doub N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N doub N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N sing Y 262 N doub Y 263 N doub N 264 N sing Y 265 N sing N 266 N sing Y 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N doub N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N doub N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N doub N 434 N sing N 435 N sing N 436 N sing N 437 N sing Y 438 N doub Y 439 N sing Y 440 N sing N 441 N sing Y 442 N doub Y 443 N sing Y 444 N sing N 445 N sing Y 446 N sing Y 447 N doub N 448 N sing Y 449 N doub N 450 N sing Y 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub N 471 N sing Y 472 N doub N 473 N sing Y 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N doub N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing US Proteins PSFGEY 0867 0887-3585 43 455 464 10.1002/prot.1057 11340661 Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes. 2001 10.2210/pdb1fej/pdb pdb_00001fej 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 90 1 CCD 1999-03-14 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.978 1.0 X12B NSLS 0.978 SYNCHROTRON NSLS BEAMLINE X12B 10758.715 PROTEASE RETROPEPSIN 3.4.23.16 L90M 2 man polymer SEQUENCE ANALOGOUS TO THE p2-NC PROCESSING SITE IN HIV-1 770.983 N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide 1 syn non-polymer 18.015 water 148 nat water E.C.3.4.23.16 no no PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLMTQIGATLNF PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPGRWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT PVNIIGRNLMTQIGATLNF C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 1 2.04 39.60 VAPOR DIFFUSION, HANGING DROP 6.5 CITRATE/PHOSPHATE BUFFER 0.05M, DTT 10MM, DMSO 10%, SATURATED AMMONIUM SULPHATE 25-50%, PROTEIN 2-5 MG/ML, pH 5.0-6.5. VAPOR DIFFUSION, HANGING DROP at 298K 298 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond entity pdbx_entity_src_syn repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Database references Derived calculations Data collection Source and taxonomy Structure summary 1 0 2001-06-01 1 1 2008-04-27 1 2 2011-07-13 1 3 2013-02-27 1 4 2021-11-03 1 5 2024-02-07 1 6 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _entity.details RCSB Y RCSB 2000-07-21 REL 2NC N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide HOH water THE INHIBITOR HAS A REDUCED PEPTIDE BOND ISOSTERE [CH2-NH] IN PLACE OF THE SCISSILE AMIDE MUTATIONS Q7K, L33I, L63I, C67A, C95A, HAVE BEEN MADE TO STABILIZE THE PROTEASE FROM AUTOPROTEOLYSIS, WHILE RETAINING ACTIVITY SIMILAR TO WILD-TYPE HIV-1 PROTEASE Inhibitor N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide Peptide-like ACE 400 2 2NC 2NC 400 D HOH 2 3 HOH HOH 100 C HOH 5 3 HOH HOH 101 C HOH 8 3 HOH HOH 102 C HOH 9 3 HOH HOH 103 C HOH 12 3 HOH HOH 104 C HOH 13 3 HOH HOH 105 C HOH 17 3 HOH HOH 106 C HOH 19 3 HOH HOH 107 C HOH 20 3 HOH HOH 108 C HOH 23 3 HOH HOH 109 C HOH 34 3 HOH HOH 110 C HOH 37 3 HOH HOH 111 C HOH 48 3 HOH HOH 112 C HOH 54 3 HOH HOH 113 C HOH 63 3 HOH HOH 114 C HOH 64 3 HOH HOH 115 C HOH 65 3 HOH HOH 116 C HOH 67 3 HOH HOH 117 C HOH 71 3 HOH HOH 118 C HOH 74 3 HOH HOH 119 C HOH 84 3 HOH HOH 120 C HOH 89 3 HOH HOH 121 C HOH 93 3 HOH HOH 122 C HOH 96 3 HOH HOH 123 C HOH 110 3 HOH HOH 124 C HOH 115 3 HOH HOH 125 C HOH 127 3 HOH HOH 126 C HOH 131 3 HOH HOH 127 C HOH 138 3 HOH HOH 128 C HOH 144 3 HOH HOH 129 C HOH 148 3 HOH HOH 130 C HOH 149 3 HOH HOH 131 C HOH 153 3 HOH HOH 132 C HOH 156 3 HOH HOH 133 C HOH 175 3 HOH HOH 134 C HOH 178 3 HOH HOH 135 C HOH 180 3 HOH HOH 136 C HOH 182 3 HOH HOH 137 C HOH 183 3 HOH HOH 138 C HOH 188 3 HOH HOH 139 C HOH 193 3 HOH HOH 140 C HOH 210 3 HOH HOH 141 C HOH 214 3 HOH HOH 142 C HOH 225 3 HOH HOH 143 C HOH 226 3 HOH HOH 144 C HOH 233 3 HOH HOH 145 C HOH 239 3 HOH HOH 146 C HOH 245 3 HOH HOH 147 C HOH 257 3 HOH HOH 148 C HOH 262 3 HOH HOH 149 C HOH 263 3 HOH HOH 150 C HOH 292 3 HOH HOH 151 C HOH 294 3 HOH HOH 152 C HOH 302 3 HOH HOH 153 C HOH 307 3 HOH HOH 154 C HOH 310 3 HOH HOH 155 C HOH 311 3 HOH HOH 156 C HOH 316 3 HOH HOH 157 C HOH 331 3 HOH HOH 158 C HOH 355 3 HOH HOH 159 C HOH 395 3 HOH HOH 160 C HOH 400 3 HOH HOH 161 C HOH 212 3 HOH HOH 252 C HOH 338 3 HOH HOH 273 C HOH 15 3 HOH HOH 15 D HOH 16 3 HOH HOH 16 D HOH 24 3 HOH HOH 24 D HOH 30 3 HOH HOH 30 D HOH 94 3 HOH HOH 94 D HOH 1 3 HOH HOH 200 D HOH 3 3 HOH HOH 201 D HOH 10 3 HOH HOH 202 D HOH 11 3 HOH HOH 203 D HOH 14 3 HOH HOH 204 D HOH 18 3 HOH HOH 205 D HOH 22 3 HOH HOH 206 D HOH 25 3 HOH HOH 207 D HOH 26 3 HOH HOH 208 D HOH 27 3 HOH HOH 209 D HOH 32 3 HOH HOH 210 D HOH 36 3 HOH HOH 211 D HOH 39 3 HOH HOH 212 D HOH 40 3 HOH HOH 213 D HOH 44 3 HOH HOH 214 D HOH 46 3 HOH HOH 215 D HOH 47 3 HOH HOH 216 D HOH 50 3 HOH HOH 217 D HOH 51 3 HOH HOH 218 D HOH 56 3 HOH HOH 219 D HOH 59 3 HOH HOH 220 D HOH 60 3 HOH HOH 221 D HOH 61 3 HOH HOH 222 D HOH 68 3 HOH HOH 223 D HOH 69 3 HOH HOH 224 D HOH 77 3 HOH HOH 225 D HOH 80 3 HOH HOH 226 D HOH 81 3 HOH HOH 227 D HOH 82 3 HOH HOH 228 D HOH 83 3 HOH HOH 229 D HOH 86 3 HOH HOH 230 D HOH 87 3 HOH HOH 231 D HOH 91 3 HOH HOH 232 D HOH 97 3 HOH HOH 233 D HOH 99 3 HOH HOH 234 D HOH 103 3 HOH HOH 235 D HOH 104 3 HOH HOH 236 D HOH 108 3 HOH HOH 237 D HOH 109 3 HOH HOH 238 D HOH 114 3 HOH HOH 239 D HOH 116 3 HOH HOH 240 D HOH 120 3 HOH HOH 241 D HOH 141 3 HOH HOH 242 D HOH 150 3 HOH HOH 243 D HOH 152 3 HOH HOH 244 D HOH 157 3 HOH HOH 245 D HOH 170 3 HOH HOH 246 D HOH 171 3 HOH HOH 247 D HOH 176 3 HOH HOH 248 D HOH 190 3 HOH HOH 249 D HOH 196 3 HOH HOH 250 D HOH 208 3 HOH HOH 251 D HOH 117 3 HOH HOH 252 D HOH 213 3 HOH HOH 253 D HOH 217 3 HOH HOH 254 D HOH 221 3 HOH HOH 255 D HOH 223 3 HOH HOH 256 D HOH 228 3 HOH HOH 257 D HOH 230 3 HOH HOH 258 D HOH 235 3 HOH HOH 259 D HOH 240 3 HOH HOH 260 D HOH 255 3 HOH HOH 261 D HOH 256 3 HOH HOH 262 D HOH 270 3 HOH HOH 263 D HOH 273 3 HOH HOH 264 D HOH 277 3 HOH HOH 265 D HOH 284 3 HOH HOH 266 D HOH 287 3 HOH HOH 267 D HOH 296 3 HOH HOH 268 D HOH 299 3 HOH HOH 269 D HOH 301 3 HOH HOH 270 D HOH 317 3 HOH HOH 271 D HOH 326 3 HOH HOH 272 D HOH 134 3 HOH HOH 273 D HOH 351 3 HOH HOH 274 D HOH 353 3 HOH HOH 275 D HOH 354 3 HOH HOH 276 D HOH 356 3 HOH HOH 277 D HOH 167 3 HOH HOH 278 D PRO 1 n 1 PRO 1 C GLN 2 n 2 GLN 2 C ILE 3 n 3 ILE 3 C THR 4 n 4 THR 4 C LEU 5 n 5 LEU 5 C TRP 6 n 6 TRP 6 C LYS 7 n 7 LYS 7 C ARG 8 n 8 ARG 8 C PRO 9 n 9 PRO 9 C LEU 10 n 10 LEU 10 C VAL 11 n 11 VAL 11 C THR 12 n 12 THR 12 C ILE 13 n 13 ILE 13 C LYS 14 n 14 LYS 14 C ILE 15 n 15 ILE 15 C GLY 16 n 16 GLY 16 C GLY 17 n 17 GLY 17 C GLN 18 n 18 GLN 18 C LEU 19 n 19 LEU 19 C LYS 20 n 20 LYS 20 C GLU 21 n 21 GLU 21 C ALA 22 n 22 ALA 22 C LEU 23 n 23 LEU 23 C LEU 24 n 24 LEU 24 C ASP 25 n 25 ASP 25 C THR 26 n 26 THR 26 C GLY 27 n 27 GLY 27 C ALA 28 n 28 ALA 28 C ASP 29 n 29 ASP 29 C ASP 30 n 30 ASP 30 C THR 31 n 31 THR 31 C VAL 32 n 32 VAL 32 C ILE 33 n 33 ILE 33 C GLU 34 n 34 GLU 34 C GLU 35 n 35 GLU 35 C MET 36 n 36 MET 36 C SER 37 n 37 SER 37 C LEU 38 n 38 LEU 38 C PRO 39 n 39 PRO 39 C GLY 40 n 40 GLY 40 C ARG 41 n 41 ARG 41 C TRP 42 n 42 TRP 42 C LYS 43 n 43 LYS 43 C PRO 44 n 44 PRO 44 C LYS 45 n 45 LYS 45 C MET 46 n 46 MET 46 C ILE 47 n 47 ILE 47 C GLY 48 n 48 GLY 48 C GLY 49 n 49 GLY 49 C ILE 50 n 50 ILE 50 C GLY 51 n 51 GLY 51 C GLY 52 n 52 GLY 52 C PHE 53 n 53 PHE 53 C ILE 54 n 54 ILE 54 C LYS 55 n 55 LYS 55 C VAL 56 n 56 VAL 56 C ARG 57 n 57 ARG 57 C GLN 58 n 58 GLN 58 C TYR 59 n 59 TYR 59 C ASP 60 n 60 ASP 60 C GLN 61 n 61 GLN 61 C ILE 62 n 62 ILE 62 C ILE 63 n 63 ILE 63 C ILE 64 n 64 ILE 64 C GLU 65 n 65 GLU 65 C ILE 66 n 66 ILE 66 C ALA 67 n 67 ALA 67 C GLY 68 n 68 GLY 68 C HIS 69 n 69 HIS 69 C LYS 70 n 70 LYS 70 C ALA 71 n 71 ALA 71 C ILE 72 n 72 ILE 72 C GLY 73 n 73 GLY 73 C THR 74 n 74 THR 74 C VAL 75 n 75 VAL 75 C LEU 76 n 76 LEU 76 C VAL 77 n 77 VAL 77 C GLY 78 n 78 GLY 78 C PRO 79 n 79 PRO 79 C THR 80 n 80 THR 80 C PRO 81 n 81 PRO 81 C VAL 82 n 82 VAL 82 C ASN 83 n 83 ASN 83 C ILE 84 n 84 ILE 84 C ILE 85 n 85 ILE 85 C GLY 86 n 86 GLY 86 C ARG 87 n 87 ARG 87 C ASN 88 n 88 ASN 88 C LEU 89 n 89 LEU 89 C MET 90 n 90 MET 90 C THR 91 n 91 THR 91 C GLN 92 n 92 GLN 92 C ILE 93 n 93 ILE 93 C GLY 94 n 94 GLY 94 C ALA 95 n 95 ALA 95 C THR 96 n 96 THR 96 C LEU 97 n 97 LEU 97 C ASN 98 n 98 ASN 98 C PHE 99 n 99 PHE 99 C PRO 101 n 1 PRO 101 D GLN 102 n 2 GLN 102 D ILE 103 n 3 ILE 103 D THR 104 n 4 THR 104 D LEU 105 n 5 LEU 105 D TRP 106 n 6 TRP 106 D LYS 107 n 7 LYS 107 D ARG 108 n 8 ARG 108 D PRO 109 n 9 PRO 109 D LEU 110 n 10 LEU 110 D VAL 111 n 11 VAL 111 D THR 112 n 12 THR 112 D ILE 113 n 13 ILE 113 D LYS 114 n 14 LYS 114 D ILE 115 n 15 ILE 115 D GLY 116 n 16 GLY 116 D GLY 117 n 17 GLY 117 D GLN 118 n 18 GLN 118 D LEU 119 n 19 LEU 119 D LYS 120 n 20 LYS 120 D GLU 121 n 21 GLU 121 D ALA 122 n 22 ALA 122 D LEU 123 n 23 LEU 123 D LEU 124 n 24 LEU 124 D ASP 125 n 25 ASP 125 D THR 126 n 26 THR 126 D GLY 127 n 27 GLY 127 D ALA 128 n 28 ALA 128 D ASP 129 n 29 ASP 129 D ASP 130 n 30 ASP 130 D THR 131 n 31 THR 131 D VAL 132 n 32 VAL 132 D ILE 133 n 33 ILE 133 D GLU 134 n 34 GLU 134 D GLU 135 n 35 GLU 135 D MET 136 n 36 MET 136 D SER 137 n 37 SER 137 D LEU 138 n 38 LEU 138 D PRO 139 n 39 PRO 139 D GLY 140 n 40 GLY 140 D ARG 141 n 41 ARG 141 D TRP 142 n 42 TRP 142 D LYS 143 n 43 LYS 143 D PRO 144 n 44 PRO 144 D LYS 145 n 45 LYS 145 D MET 146 n 46 MET 146 D ILE 147 n 47 ILE 147 D GLY 148 n 48 GLY 148 D GLY 149 n 49 GLY 149 D ILE 150 n 50 ILE 150 D GLY 151 n 51 GLY 151 D GLY 152 n 52 GLY 152 D PHE 153 n 53 PHE 153 D ILE 154 n 54 ILE 154 D LYS 155 n 55 LYS 155 D VAL 156 n 56 VAL 156 D ARG 157 n 57 ARG 157 D GLN 158 n 58 GLN 158 D TYR 159 n 59 TYR 159 D ASP 160 n 60 ASP 160 D GLN 161 n 61 GLN 161 D ILE 162 n 62 ILE 162 D ILE 163 n 63 ILE 163 D ILE 164 n 64 ILE 164 D GLU 165 n 65 GLU 165 D ILE 166 n 66 ILE 166 D ALA 167 n 67 ALA 167 D GLY 168 n 68 GLY 168 D HIS 169 n 69 HIS 169 D LYS 170 n 70 LYS 170 D ALA 171 n 71 ALA 171 D ILE 172 n 72 ILE 172 D GLY 173 n 73 GLY 173 D THR 174 n 74 THR 174 D VAL 175 n 75 VAL 175 D LEU 176 n 76 LEU 176 D VAL 177 n 77 VAL 177 D GLY 178 n 78 GLY 178 D PRO 179 n 79 PRO 179 D THR 180 n 80 THR 180 D PRO 181 n 81 PRO 181 D VAL 182 n 82 VAL 182 D ASN 183 n 83 ASN 183 D ILE 184 n 84 ILE 184 D ILE 185 n 85 ILE 185 D GLY 186 n 86 GLY 186 D ARG 187 n 87 ARG 187 D ASN 188 n 88 ASN 188 D LEU 189 n 89 LEU 189 D MET 190 n 90 MET 190 D THR 191 n 91 THR 191 D GLN 192 n 92 GLN 192 D ILE 193 n 93 ILE 193 D GLY 194 n 94 GLY 194 D ALA 195 n 95 ALA 195 D THR 196 n 96 THR 196 D LEU 197 n 97 LEU 197 D ASN 198 n 98 ASN 198 D PHE 199 n 99 PHE 199 D author_and_software_defined_assembly PISA 2 dimeric 5360 -29 9180 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C O ILE 3 A O ILE 3 D N LEU 197 B N LEU 97 D O ASN 198 B O ASN 98 C N THR 96 A N THR 96 C O LEU 97 A O LEU 97 D N ILE 103 B N ILE 3 0.2850000 0.2150000 1.78 8.0 846 17522 4.8 Random 1 THROUGHOUT 1.0 ENGH & HUBER 1.78 8.0 148 1714 54 0 1512 1.7 30 1FEJ 0.0670000 1 1.78 1.86 1 phasing AMoRE refinement X-PLOR 3.843 data collection ADSC data scaling SCALEPACK STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES 1 N N 1 N N 2 N N 3 N N 3 N N The biological assembly is a dimer consisting of chains C and D C GLY 86 A GLY 86 HELX_P C THR 91 A THR 91 1 1 6 D GLY 186 B GLY 86 HELX_P D THR 191 B THR 91 1 2 6 HYDROLASE/HYDROLASE INHIBITOR HIV-1 PROTEASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX POL_HV1B5 UNP 1 69 P04587 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 69 167 1FEJ 1 99 P04587 C 1 1 99 69 167 1FEJ 101 199 P04587 D 1 1 99 1 GLN engineered mutation LYS 7 1FEJ C P04587 UNP 75 7 1 LEU engineered mutation ILE 33 1FEJ C P04587 UNP 101 33 1 LEU engineered mutation ILE 63 1FEJ C P04587 UNP 131 63 1 CYS engineered mutation ALA 67 1FEJ C P04587 UNP 135 67 1 LEU engineered mutation MET 90 1FEJ C P04587 UNP 158 90 1 CYS engineered mutation ALA 95 1FEJ C P04587 UNP 163 95 2 GLN engineered mutation LYS 107 1FEJ D P04587 UNP 75 7 2 LEU engineered mutation ILE 133 1FEJ D P04587 UNP 101 33 2 LEU engineered mutation ILE 163 1FEJ D P04587 UNP 131 63 2 CYS engineered mutation ALA 167 1FEJ D P04587 UNP 135 67 2 LEU engineered mutation MET 190 1FEJ D P04587 UNP 158 90 2 CYS engineered mutation ALA 195 1FEJ D P04587 UNP 163 95 4 anti-parallel anti-parallel anti-parallel C GLN 2 A GLN 2 C ILE 3 A ILE 3 D THR 196 B THR 96 D ASN 198 B ASN 98 C THR 96 A THR 96 C ASN 98 A ASN 98 D GLN 102 B GLN 2 D THR 104 B THR 4 BINDING SITE FOR RESIDUE 2NC D 400 D 2NC 400 Software 25 C ARG 8 A ARG 8 25 1_555 C ASP 25 A ASP 25 25 1_555 C GLY 27 A GLY 27 25 1_555 C ALA 28 A ALA 28 25 1_555 C ASP 29 A ASP 29 25 1_555 C ASP 30 A ASP 30 25 1_555 C GLY 48 A GLY 48 25 1_555 C ILE 50 A ILE 50 25 1_555 C PRO 81 A PRO 81 25 1_555 C VAL 82 A VAL 82 25 1_555 C ILE 84 A ILE 84 25 1_555 D HOH 15 E HOH 25 1_555 D HOH 24 E HOH 25 1_555 D HOH 30 E HOH 25 1_555 D ARG 108 B ARG 8 25 1_555 D ASP 125 B ASP 25 25 1_555 D GLY 127 B GLY 27 25 1_555 D ALA 128 B ALA 28 25 1_555 D ASP 129 B ASP 29 25 1_555 D ASP 130 B ASP 30 25 1_555 D ILE 147 B ILE 47 25 1_555 D GLY 148 B GLY 48 25 1_555 D GLY 149 B GLY 49 25 1_555 D VAL 182 B VAL 82 25 1_555 D HOH 201 E HOH 25 1_555 19 orthorhombic P 21 21 21