0.021271 -0.008046 -0.005243 0.000000 0.015982 -0.002778 0.000000 0.000000 0.013206 0.00000 0.00000 0.00000 Wang, B. Sharma, A. Maile, R. Saad, M. Collins, E.J. Frelinger, J.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 75.10 72.90 69.28 47.013 66.897 80.414 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.IMMUNOL. JOIMA3 0952 0022-1767 169 3137 3145 12218131 Peptidic termini play a significant role in TCR recognition 2002 US J.EXP.MED. JEMEAV 0774 0022-1007 189 359 370 10.1084/jem.189.2.359 Structural evidence of T cell Xeno reactivity in the absence of molecular mimicry 1999 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1999-09-18 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 31804.420 H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B, ALPHA CHAIN EXTRACELLULAR PORTION 2 man polymer 11835.555 BETA-2 MICROGLOBULIN BETA CHAIN BETA-2 MICROGLOBULIN 2 man polymer SYNTHETIC 1003.130 SYNTHETIC PEPTIDE WITH SEQUENCE SER-ALA-VAL-TYR-ASN-PHE-ALA-THR-MET C9M/K1A 2 syn polymer 18.015 water 14 nat water H-2D(B) no no PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNL LGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLE GECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTF QKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNL LGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLE GECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTF QKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW A,D polypeptide(L) no no MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYA CRVKHDSMAEPKTVYWDRDM MIQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYA CRVKHDSMAEPKTVYWDRDM B,E polypeptide(L) no no SAVYNFATM SAVYNFATM C,F polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 511693 Escherichia coli BL21 BL21 PLASMID PLM1 house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 511693 Escherichia coli BL21 BL21 PLASMID PET3A 1 2.49 50.67 VAPOR DIFFUSION, HANGING DROP 6.5 25% PEG 8000, 6% DMSO, 0.8M Glycine, 150mM NaCl 25mM MES buffer, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 repository Initial release Version format compliance Version format compliance 1 0 2002-12-11 1 1 2008-04-27 1 2 2011-07-13 1bz9 contains murine MHC Class I H-2Db complexed to peptide p1027 (FAPGVFPYM) 1FFN contains murine MHC Class I H-2Db complexed to peptide p1027 (KAVYNFATM) 1FFO contains murine MHC Class I H-2Db complexed to peptide p1027 (AAVYNFATM) RCSB Y RCSB 2000-07-25 REL REL HOH water The peptide was synthesized sample TIP 1 4 HOH HOH 275 A TIP 4 4 HOH HOH 276 A TIP 5 4 HOH HOH 277 A TIP 2 4 HOH HOH 100 B TIP 11 4 HOH HOH 101 B TIP 12 4 HOH HOH 102 B TIP 3 4 HOH HOH 275 D TIP 6 4 HOH HOH 276 D TIP 7 4 HOH HOH 277 D TIP 8 4 HOH HOH 278 D TIP 9 4 HOH HOH 279 D TIP 13 4 HOH HOH 280 D TIP 10 4 HOH HOH 100 E TIP 14 4 HOH HOH 101 E PRO 2 n 1 PRO 2 A HIS 3 n 2 HIS 3 A SER 4 n 3 SER 4 A MET 5 n 4 MET 5 A ARG 6 n 5 ARG 6 A TYR 7 n 6 TYR 7 A PHE 8 n 7 PHE 8 A GLU 9 n 8 GLU 9 A THR 10 n 9 THR 10 A ALA 11 n 10 ALA 11 A VAL 12 n 11 VAL 12 A SER 13 n 12 SER 13 A ARG 14 n 13 ARG 14 A PRO 15 n 14 PRO 15 A GLY 16 n 15 GLY 16 A LEU 17 n 16 LEU 17 A GLU 18 n 17 GLU 18 A GLU 19 n 18 GLU 19 A PRO 20 n 19 PRO 20 A ARG 21 n 20 ARG 21 A TYR 22 n 21 TYR 22 A ILE 23 n 22 ILE 23 A SER 24 n 23 SER 24 A VAL 25 n 24 VAL 25 A GLY 26 n 25 GLY 26 A TYR 27 n 26 TYR 27 A VAL 28 n 27 VAL 28 A ASP 29 n 28 ASP 29 A ASN 30 n 29 ASN 30 A LYS 31 n 30 LYS 31 A GLU 32 n 31 GLU 32 A PHE 33 n 32 PHE 33 A VAL 34 n 33 VAL 34 A ARG 35 n 34 ARG 35 A PHE 36 n 35 PHE 36 A ASP 37 n 36 ASP 37 A SER 38 n 37 SER 38 A ASP 39 n 38 ASP 39 A ALA 40 n 39 ALA 40 A GLU 41 n 40 GLU 41 A ASN 42 n 41 ASN 42 A PRO 43 n 42 PRO 43 A ARG 44 n 43 ARG 44 A TYR 45 n 44 TYR 45 A GLU 46 n 45 GLU 46 A PRO 47 n 46 PRO 47 A ARG 48 n 47 ARG 48 A ALA 49 n 48 ALA 49 A PRO 50 n 49 PRO 50 A TRP 51 n 50 TRP 51 A MET 52 n 51 MET 52 A GLU 53 n 52 GLU 53 A GLN 54 n 53 GLN 54 A GLU 55 n 54 GLU 55 A GLY 56 n 55 GLY 56 A PRO 57 n 56 PRO 57 A GLU 58 n 57 GLU 58 A TYR 59 n 58 TYR 59 A TRP 60 n 59 TRP 60 A GLU 61 n 60 GLU 61 A ARG 62 n 61 ARG 62 A GLU 63 n 62 GLU 63 A THR 64 n 63 THR 64 A GLN 65 n 64 GLN 65 A LYS 66 n 65 LYS 66 A ALA 67 n 66 ALA 67 A LYS 68 n 67 LYS 68 A GLY 69 n 68 GLY 69 A GLN 70 n 69 GLN 70 A GLU 71 n 70 GLU 71 A GLN 72 n 71 GLN 72 A TRP 73 n 72 TRP 73 A PHE 74 n 73 PHE 74 A ARG 75 n 74 ARG 75 A VAL 76 n 75 VAL 76 A SER 77 n 76 SER 77 A LEU 78 n 77 LEU 78 A ARG 79 n 78 ARG 79 A ASN 80 n 79 ASN 80 A LEU 81 n 80 LEU 81 A LEU 82 n 81 LEU 82 A GLY 83 n 82 GLY 83 A TYR 84 n 83 TYR 84 A TYR 85 n 84 TYR 85 A ASN 86 n 85 ASN 86 A GLN 87 n 86 GLN 87 A SER 88 n 87 SER 88 A ALA 89 n 88 ALA 89 A GLY 90 n 89 GLY 90 A GLY 91 n 90 GLY 91 A SER 92 n 91 SER 92 A HIS 93 n 92 HIS 93 A THR 94 n 93 THR 94 A LEU 95 n 94 LEU 95 A GLN 96 n 95 GLN 96 A GLN 97 n 96 GLN 97 A MET 98 n 97 MET 98 A SER 99 n 98 SER 99 A GLY 100 n 99 GLY 100 A CYS 101 n 100 CYS 101 A ASP 102 n 101 ASP 102 A LEU 103 n 102 LEU 103 A GLY 104 n 103 GLY 104 A SER 105 n 104 SER 105 A ASP 106 n 105 ASP 106 A TRP 107 n 106 TRP 107 A ARG 108 n 107 ARG 108 A LEU 109 n 108 LEU 109 A LEU 110 n 109 LEU 110 A ARG 111 n 110 ARG 111 A GLY 112 n 111 GLY 112 A TYR 113 n 112 TYR 113 A LEU 114 n 113 LEU 114 A GLN 115 n 114 GLN 115 A PHE 116 n 115 PHE 116 A ALA 117 n 116 ALA 117 A TYR 118 n 117 TYR 118 A GLU 119 n 118 GLU 119 A GLY 120 n 119 GLY 120 A ARG 121 n 120 ARG 121 A ASP 122 n 121 ASP 122 A TYR 123 n 122 TYR 123 A ILE 124 n 123 ILE 124 A ALA 125 n 124 ALA 125 A LEU 126 n 125 LEU 126 A ASN 127 n 126 ASN 127 A GLU 128 n 127 GLU 128 A ASP 129 n 128 ASP 129 A LEU 130 n 129 LEU 130 A LYS 131 n 130 LYS 131 A THR 132 n 131 THR 132 A TRP 133 n 132 TRP 133 A THR 134 n 133 THR 134 A ALA 135 n 134 ALA 135 A ALA 136 n 135 ALA 136 A ASP 137 n 136 ASP 137 A MET 138 n 137 MET 138 A ALA 139 n 138 ALA 139 A ALA 140 n 139 ALA 140 A GLN 141 n 140 GLN 141 A ILE 142 n 141 ILE 142 A THR 143 n 142 THR 143 A ARG 144 n 143 ARG 144 A ARG 145 n 144 ARG 145 A LYS 146 n 145 LYS 146 A TRP 147 n 146 TRP 147 A GLU 148 n 147 GLU 148 A GLN 149 n 148 GLN 149 A SER 150 n 149 SER 150 A GLY 151 n 150 GLY 151 A ALA 152 n 151 ALA 152 A ALA 153 n 152 ALA 153 A GLU 154 n 153 GLU 154 A HIS 155 n 154 HIS 155 A TYR 156 n 155 TYR 156 A LYS 157 n 156 LYS 157 A ALA 158 n 157 ALA 158 A TYR 159 n 158 TYR 159 A LEU 160 n 159 LEU 160 A GLU 161 n 160 GLU 161 A GLY 162 n 161 GLY 162 A GLU 163 n 162 GLU 163 A CYS 164 n 163 CYS 164 A VAL 165 n 164 VAL 165 A GLU 166 n 165 GLU 166 A TRP 167 n 166 TRP 167 A LEU 168 n 167 LEU 168 A HIS 169 n 168 HIS 169 A ARG 170 n 169 ARG 170 A TYR 171 n 170 TYR 171 A LEU 172 n 171 LEU 172 A LYS 173 n 172 LYS 173 A ASN 174 n 173 ASN 174 A GLY 175 n 174 GLY 175 A ASN 176 n 175 ASN 176 A ALA 177 n 176 ALA 177 A THR 178 n 177 THR 178 A LEU 179 n 178 LEU 179 A LEU 180 n 179 LEU 180 A ARG 181 n 180 ARG 181 A THR 182 n 181 THR 182 A ASP 183 n 182 ASP 183 A SER 184 n 183 SER 184 A PRO 185 n 184 PRO 185 A LYS 186 n 185 LYS 186 A ALA 187 n 186 ALA 187 A HIS 188 n 187 HIS 188 A VAL 189 n 188 VAL 189 A THR 190 n 189 THR 190 A HIS 191 n 190 HIS 191 A HIS 192 n 191 HIS 192 A PRO 193 n 192 PRO 193 A ARG 194 n 193 ARG 194 A SER 195 n 194 SER 195 A LYS 196 n 195 LYS 196 A GLY 197 n 196 GLY 197 A GLU 198 n 197 GLU 198 A VAL 199 n 198 VAL 199 A THR 200 n 199 THR 200 A LEU 201 n 200 LEU 201 A ARG 202 n 201 ARG 202 A CYS 203 n 202 CYS 203 A TRP 204 n 203 TRP 204 A ALA 205 n 204 ALA 205 A LEU 206 n 205 LEU 206 A GLY 207 n 206 GLY 207 A PHE 208 n 207 PHE 208 A TYR 209 n 208 TYR 209 A PRO 210 n 209 PRO 210 A ALA 211 n 210 ALA 211 A ASP 212 n 211 ASP 212 A ILE 213 n 212 ILE 213 A THR 214 n 213 THR 214 A LEU 215 n 214 LEU 215 A THR 216 n 215 THR 216 A TRP 217 n 216 TRP 217 A GLN 218 n 217 GLN 218 A LEU 219 n 218 LEU 219 A ASN 220 n 219 ASN 220 A GLY 221 n 220 GLY 221 A GLU 222 n 221 GLU 222 A GLU 223 n 222 GLU 223 A LEU 224 n 223 LEU 224 A THR 225 n 224 THR 225 A GLN 226 n 225 GLN 226 A ASP 227 n 226 ASP 227 A MET 228 n 227 MET 228 A GLU 229 n 228 GLU 229 A LEU 230 n 229 LEU 230 A VAL 231 n 230 VAL 231 A GLU 232 n 231 GLU 232 A THR 233 n 232 THR 233 A ARG 234 n 233 ARG 234 A PRO 235 n 234 PRO 235 A ALA 236 n 235 ALA 236 A GLY 237 n 236 GLY 237 A ASP 238 n 237 ASP 238 A GLY 239 n 238 GLY 239 A THR 240 n 239 THR 240 A PHE 241 n 240 PHE 241 A GLN 242 n 241 GLN 242 A LYS 243 n 242 LYS 243 A TRP 244 n 243 TRP 244 A ALA 245 n 244 ALA 245 A SER 246 n 245 SER 246 A VAL 247 n 246 VAL 247 A VAL 248 n 247 VAL 248 A VAL 249 n 248 VAL 249 A PRO 250 n 249 PRO 250 A LEU 251 n 250 LEU 251 A GLY 252 n 251 GLY 252 A LYS 253 n 252 LYS 253 A GLU 254 n 253 GLU 254 A GLN 255 n 254 GLN 255 A ASN 256 n 255 ASN 256 A TYR 257 n 256 TYR 257 A THR 258 n 257 THR 258 A CYS 259 n 258 CYS 259 A ARG 260 n 259 ARG 260 A VAL 261 n 260 VAL 261 A TYR 262 n 261 TYR 262 A HIS 263 n 262 HIS 263 A GLU 264 n 263 GLU 264 A GLY 265 n 264 GLY 265 A LEU 266 n 265 LEU 266 A PRO 267 n 266 PRO 267 A GLU 268 n 267 GLU 268 A PRO 269 n 268 PRO 269 A LEU 270 n 269 LEU 270 A THR 271 n 270 THR 271 A LEU 272 n 271 LEU 272 A ARG 273 n 272 ARG 273 A TRP 274 n 273 TRP 274 A MET 0 n 1 MET 0 B ILE 1 n 2 ILE 1 B GLN 2 n 3 GLN 2 B LYS 3 n 4 LYS 3 B THR 4 n 5 THR 4 B PRO 5 n 6 PRO 5 B GLN 6 n 7 GLN 6 B ILE 7 n 8 ILE 7 B GLN 8 n 9 GLN 8 B VAL 9 n 10 VAL 9 B TYR 10 n 11 TYR 10 B SER 11 n 12 SER 11 B ARG 12 n 13 ARG 12 B HIS 13 n 14 HIS 13 B PRO 14 n 15 PRO 14 B PRO 15 n 16 PRO 15 B GLU 16 n 17 GLU 16 B ASN 17 n 18 ASN 17 B GLY 18 n 19 GLY 18 B LYS 19 n 20 LYS 19 B PRO 20 n 21 PRO 20 B ASN 21 n 22 ASN 21 B ILE 22 n 23 ILE 22 B LEU 23 n 24 LEU 23 B ASN 24 n 25 ASN 24 B CYS 25 n 26 CYS 25 B TYR 26 n 27 TYR 26 B VAL 27 n 28 VAL 27 B THR 28 n 29 THR 28 B GLN 29 n 30 GLN 29 B PHE 30 n 31 PHE 30 B HIS 31 n 32 HIS 31 B PRO 32 n 33 PRO 32 B PRO 33 n 34 PRO 33 B HIS 34 n 35 HIS 34 B ILE 35 n 36 ILE 35 B GLU 36 n 37 GLU 36 B ILE 37 n 38 ILE 37 B GLN 38 n 39 GLN 38 B MET 39 n 40 MET 39 B LEU 40 n 41 LEU 40 B LYS 41 n 42 LYS 41 B ASN 42 n 43 ASN 42 B GLY 43 n 44 GLY 43 B LYS 44 n 45 LYS 44 B LYS 45 n 46 LYS 45 B ILE 46 n 47 ILE 46 B PRO 47 n 48 PRO 47 B LYS 48 n 49 LYS 48 B VAL 49 n 50 VAL 49 B GLU 50 n 51 GLU 50 B MET 51 n 52 MET 51 B SER 52 n 53 SER 52 B ASP 53 n 54 ASP 53 B MET 54 n 55 MET 54 B SER 55 n 56 SER 55 B PHE 56 n 57 PHE 56 B SER 57 n 58 SER 57 B LYS 58 n 59 LYS 58 B ASP 59 n 60 ASP 59 B TRP 60 n 61 TRP 60 B SER 61 n 62 SER 61 B PHE 62 n 63 PHE 62 B TYR 63 n 64 TYR 63 B ILE 64 n 65 ILE 64 B LEU 65 n 66 LEU 65 B ALA 66 n 67 ALA 66 B HIS 67 n 68 HIS 67 B THR 68 n 69 THR 68 B GLU 69 n 70 GLU 69 B PHE 70 n 71 PHE 70 B THR 71 n 72 THR 71 B PRO 72 n 73 PRO 72 B THR 73 n 74 THR 73 B GLU 74 n 75 GLU 74 B THR 75 n 76 THR 75 B ASP 76 n 77 ASP 76 B THR 77 n 78 THR 77 B TYR 78 n 79 TYR 78 B ALA 79 n 80 ALA 79 B CYS 80 n 81 CYS 80 B ARG 81 n 82 ARG 81 B VAL 82 n 83 VAL 82 B LYS 83 n 84 LYS 83 B HIS 84 n 85 HIS 84 B ASP 85 n 86 ASP 85 B SER 86 n 87 SER 86 B MET 87 n 88 MET 87 B ALA 88 n 89 ALA 88 B GLU 89 n 90 GLU 89 B PRO 90 n 91 PRO 90 B LYS 91 n 92 LYS 91 B THR 92 n 93 THR 92 B VAL 93 n 94 VAL 93 B TYR 94 n 95 TYR 94 B TRP 95 n 96 TRP 95 B ASP 96 n 97 ASP 96 B ARG 97 n 98 ARG 97 B ASP 98 n 99 ASP 98 B MET 99 n 100 MET 99 B SER 1 n 1 SER 1 C ALA 2 n 2 ALA 2 C VAL 3 n 3 VAL 3 C TYR 4 n 4 TYR 4 C ASN 5 n 5 ASN 5 C PHE 6 n 6 PHE 6 C ALA 7 n 7 ALA 7 C THR 8 n 8 THR 8 C MET 9 n 9 MET 9 C PRO 2 n 1 PRO 2 D HIS 3 n 2 HIS 3 D SER 4 n 3 SER 4 D MET 5 n 4 MET 5 D ARG 6 n 5 ARG 6 D TYR 7 n 6 TYR 7 D PHE 8 n 7 PHE 8 D GLU 9 n 8 GLU 9 D THR 10 n 9 THR 10 D ALA 11 n 10 ALA 11 D VAL 12 n 11 VAL 12 D SER 13 n 12 SER 13 D ARG 14 n 13 ARG 14 D PRO 15 n 14 PRO 15 D GLY 16 n 15 GLY 16 D LEU 17 n 16 LEU 17 D GLU 18 n 17 GLU 18 D GLU 19 n 18 GLU 19 D PRO 20 n 19 PRO 20 D ARG 21 n 20 ARG 21 D TYR 22 n 21 TYR 22 D ILE 23 n 22 ILE 23 D SER 24 n 23 SER 24 D VAL 25 n 24 VAL 25 D GLY 26 n 25 GLY 26 D TYR 27 n 26 TYR 27 D VAL 28 n 27 VAL 28 D ASP 29 n 28 ASP 29 D ASN 30 n 29 ASN 30 D LYS 31 n 30 LYS 31 D GLU 32 n 31 GLU 32 D PHE 33 n 32 PHE 33 D VAL 34 n 33 VAL 34 D ARG 35 n 34 ARG 35 D PHE 36 n 35 PHE 36 D ASP 37 n 36 ASP 37 D SER 38 n 37 SER 38 D ASP 39 n 38 ASP 39 D ALA 40 n 39 ALA 40 D GLU 41 n 40 GLU 41 D ASN 42 n 41 ASN 42 D PRO 43 n 42 PRO 43 D ARG 44 n 43 ARG 44 D TYR 45 n 44 TYR 45 D GLU 46 n 45 GLU 46 D PRO 47 n 46 PRO 47 D ARG 48 n 47 ARG 48 D ALA 49 n 48 ALA 49 D PRO 50 n 49 PRO 50 D TRP 51 n 50 TRP 51 D MET 52 n 51 MET 52 D GLU 53 n 52 GLU 53 D GLN 54 n 53 GLN 54 D GLU 55 n 54 GLU 55 D GLY 56 n 55 GLY 56 D PRO 57 n 56 PRO 57 D GLU 58 n 57 GLU 58 D TYR 59 n 58 TYR 59 D TRP 60 n 59 TRP 60 D GLU 61 n 60 GLU 61 D ARG 62 n 61 ARG 62 D GLU 63 n 62 GLU 63 D THR 64 n 63 THR 64 D GLN 65 n 64 GLN 65 D LYS 66 n 65 LYS 66 D ALA 67 n 66 ALA 67 D LYS 68 n 67 LYS 68 D GLY 69 n 68 GLY 69 D GLN 70 n 69 GLN 70 D GLU 71 n 70 GLU 71 D GLN 72 n 71 GLN 72 D TRP 73 n 72 TRP 73 D PHE 74 n 73 PHE 74 D ARG 75 n 74 ARG 75 D VAL 76 n 75 VAL 76 D SER 77 n 76 SER 77 D LEU 78 n 77 LEU 78 D ARG 79 n 78 ARG 79 D ASN 80 n 79 ASN 80 D LEU 81 n 80 LEU 81 D LEU 82 n 81 LEU 82 D GLY 83 n 82 GLY 83 D TYR 84 n 83 TYR 84 D TYR 85 n 84 TYR 85 D ASN 86 n 85 ASN 86 D GLN 87 n 86 GLN 87 D SER 88 n 87 SER 88 D ALA 89 n 88 ALA 89 D GLY 90 n 89 GLY 90 D GLY 91 n 90 GLY 91 D SER 92 n 91 SER 92 D HIS 93 n 92 HIS 93 D THR 94 n 93 THR 94 D LEU 95 n 94 LEU 95 D GLN 96 n 95 GLN 96 D GLN 97 n 96 GLN 97 D MET 98 n 97 MET 98 D SER 99 n 98 SER 99 D GLY 100 n 99 GLY 100 D CYS 101 n 100 CYS 101 D ASP 102 n 101 ASP 102 D LEU 103 n 102 LEU 103 D GLY 104 n 103 GLY 104 D SER 105 n 104 SER 105 D ASP 106 n 105 ASP 106 D TRP 107 n 106 TRP 107 D ARG 108 n 107 ARG 108 D LEU 109 n 108 LEU 109 D LEU 110 n 109 LEU 110 D ARG 111 n 110 ARG 111 D GLY 112 n 111 GLY 112 D TYR 113 n 112 TYR 113 D LEU 114 n 113 LEU 114 D GLN 115 n 114 GLN 115 D PHE 116 n 115 PHE 116 D ALA 117 n 116 ALA 117 D TYR 118 n 117 TYR 118 D GLU 119 n 118 GLU 119 D GLY 120 n 119 GLY 120 D ARG 121 n 120 ARG 121 D ASP 122 n 121 ASP 122 D TYR 123 n 122 TYR 123 D ILE 124 n 123 ILE 124 D ALA 125 n 124 ALA 125 D LEU 126 n 125 LEU 126 D ASN 127 n 126 ASN 127 D GLU 128 n 127 GLU 128 D ASP 129 n 128 ASP 129 D LEU 130 n 129 LEU 130 D LYS 131 n 130 LYS 131 D THR 132 n 131 THR 132 D TRP 133 n 132 TRP 133 D THR 134 n 133 THR 134 D ALA 135 n 134 ALA 135 D ALA 136 n 135 ALA 136 D ASP 137 n 136 ASP 137 D MET 138 n 137 MET 138 D ALA 139 n 138 ALA 139 D ALA 140 n 139 ALA 140 D GLN 141 n 140 GLN 141 D ILE 142 n 141 ILE 142 D THR 143 n 142 THR 143 D ARG 144 n 143 ARG 144 D ARG 145 n 144 ARG 145 D LYS 146 n 145 LYS 146 D TRP 147 n 146 TRP 147 D GLU 148 n 147 GLU 148 D GLN 149 n 148 GLN 149 D SER 150 n 149 SER 150 D GLY 151 n 150 GLY 151 D ALA 152 n 151 ALA 152 D ALA 153 n 152 ALA 153 D GLU 154 n 153 GLU 154 D HIS 155 n 154 HIS 155 D TYR 156 n 155 TYR 156 D LYS 157 n 156 LYS 157 D ALA 158 n 157 ALA 158 D TYR 159 n 158 TYR 159 D LEU 160 n 159 LEU 160 D GLU 161 n 160 GLU 161 D GLY 162 n 161 GLY 162 D GLU 163 n 162 GLU 163 D CYS 164 n 163 CYS 164 D VAL 165 n 164 VAL 165 D GLU 166 n 165 GLU 166 D TRP 167 n 166 TRP 167 D LEU 168 n 167 LEU 168 D HIS 169 n 168 HIS 169 D ARG 170 n 169 ARG 170 D TYR 171 n 170 TYR 171 D LEU 172 n 171 LEU 172 D LYS 173 n 172 LYS 173 D ASN 174 n 173 ASN 174 D GLY 175 n 174 GLY 175 D ASN 176 n 175 ASN 176 D ALA 177 n 176 ALA 177 D THR 178 n 177 THR 178 D LEU 179 n 178 LEU 179 D LEU 180 n 179 LEU 180 D ARG 181 n 180 ARG 181 D THR 182 n 181 THR 182 D ASP 183 n 182 ASP 183 D SER 184 n 183 SER 184 D PRO 185 n 184 PRO 185 D LYS 186 n 185 LYS 186 D ALA 187 n 186 ALA 187 D HIS 188 n 187 HIS 188 D VAL 189 n 188 VAL 189 D THR 190 n 189 THR 190 D HIS 191 n 190 HIS 191 D HIS 192 n 191 HIS 192 D PRO 193 n 192 PRO 193 D ARG 194 n 193 ARG 194 D SER 195 n 194 SER 195 D LYS 196 n 195 LYS 196 D GLY 197 n 196 GLY 197 D GLU 198 n 197 GLU 198 D VAL 199 n 198 VAL 199 D THR 200 n 199 THR 200 D LEU 201 n 200 LEU 201 D ARG 202 n 201 ARG 202 D CYS 203 n 202 CYS 203 D TRP 204 n 203 TRP 204 D ALA 205 n 204 ALA 205 D LEU 206 n 205 LEU 206 D GLY 207 n 206 GLY 207 D PHE 208 n 207 PHE 208 D TYR 209 n 208 TYR 209 D PRO 210 n 209 PRO 210 D ALA 211 n 210 ALA 211 D ASP 212 n 211 ASP 212 D ILE 213 n 212 ILE 213 D THR 214 n 213 THR 214 D LEU 215 n 214 LEU 215 D THR 216 n 215 THR 216 D TRP 217 n 216 TRP 217 D GLN 218 n 217 GLN 218 D LEU 219 n 218 LEU 219 D ASN 220 n 219 ASN 220 D GLY 221 n 220 GLY 221 D GLU 222 n 221 GLU 222 D GLU 223 n 222 GLU 223 D LEU 224 n 223 LEU 224 D THR 225 n 224 THR 225 D GLN 226 n 225 GLN 226 D ASP 227 n 226 ASP 227 D MET 228 n 227 MET 228 D GLU 229 n 228 GLU 229 D LEU 230 n 229 LEU 230 D VAL 231 n 230 VAL 231 D GLU 232 n 231 GLU 232 D THR 233 n 232 THR 233 D ARG 234 n 233 ARG 234 D PRO 235 n 234 PRO 235 D ALA 236 n 235 ALA 236 D GLY 237 n 236 GLY 237 D ASP 238 n 237 ASP 238 D GLY 239 n 238 GLY 239 D THR 240 n 239 THR 240 D PHE 241 n 240 PHE 241 D GLN 242 n 241 GLN 242 D LYS 243 n 242 LYS 243 D TRP 244 n 243 TRP 244 D ALA 245 n 244 ALA 245 D SER 246 n 245 SER 246 D VAL 247 n 246 VAL 247 D VAL 248 n 247 VAL 248 D VAL 249 n 248 VAL 249 D PRO 250 n 249 PRO 250 D LEU 251 n 250 LEU 251 D GLY 252 n 251 GLY 252 D LYS 253 n 252 LYS 253 D GLU 254 n 253 GLU 254 D GLN 255 n 254 GLN 255 D ASN 256 n 255 ASN 256 D TYR 257 n 256 TYR 257 D THR 258 n 257 THR 258 D CYS 259 n 258 CYS 259 D ARG 260 n 259 ARG 260 D VAL 261 n 260 VAL 261 D TYR 262 n 261 TYR 262 D HIS 263 n 262 HIS 263 D GLU 264 n 263 GLU 264 D GLY 265 n 264 GLY 265 D LEU 266 n 265 LEU 266 D PRO 267 n 266 PRO 267 D GLU 268 n 267 GLU 268 D PRO 269 n 268 PRO 269 D LEU 270 n 269 LEU 270 D THR 271 n 270 THR 271 D LEU 272 n 271 LEU 272 D ARG 273 n 272 ARG 273 D TRP 274 n 273 TRP 274 D MET 0 n 1 MET 0 E ILE 1 n 2 ILE 1 E GLN 2 n 3 GLN 2 E LYS 3 n 4 LYS 3 E THR 4 n 5 THR 4 E PRO 5 n 6 PRO 5 E GLN 6 n 7 GLN 6 E ILE 7 n 8 ILE 7 E GLN 8 n 9 GLN 8 E VAL 9 n 10 VAL 9 E TYR 10 n 11 TYR 10 E SER 11 n 12 SER 11 E ARG 12 n 13 ARG 12 E HIS 13 n 14 HIS 13 E PRO 14 n 15 PRO 14 E PRO 15 n 16 PRO 15 E GLU 16 n 17 GLU 16 E ASN 17 n 18 ASN 17 E GLY 18 n 19 GLY 18 E LYS 19 n 20 LYS 19 E PRO 20 n 21 PRO 20 E ASN 21 n 22 ASN 21 E ILE 22 n 23 ILE 22 E LEU 23 n 24 LEU 23 E ASN 24 n 25 ASN 24 E CYS 25 n 26 CYS 25 E TYR 26 n 27 TYR 26 E VAL 27 n 28 VAL 27 E THR 28 n 29 THR 28 E GLN 29 n 30 GLN 29 E PHE 30 n 31 PHE 30 E HIS 31 n 32 HIS 31 E PRO 32 n 33 PRO 32 E PRO 33 n 34 PRO 33 E HIS 34 n 35 HIS 34 E ILE 35 n 36 ILE 35 E GLU 36 n 37 GLU 36 E ILE 37 n 38 ILE 37 E GLN 38 n 39 GLN 38 E MET 39 n 40 MET 39 E LEU 40 n 41 LEU 40 E LYS 41 n 42 LYS 41 E ASN 42 n 43 ASN 42 E GLY 43 n 44 GLY 43 E LYS 44 n 45 LYS 44 E LYS 45 n 46 LYS 45 E ILE 46 n 47 ILE 46 E PRO 47 n 48 PRO 47 E LYS 48 n 49 LYS 48 E VAL 49 n 50 VAL 49 E GLU 50 n 51 GLU 50 E MET 51 n 52 MET 51 E SER 52 n 53 SER 52 E ASP 53 n 54 ASP 53 E MET 54 n 55 MET 54 E SER 55 n 56 SER 55 E PHE 56 n 57 PHE 56 E SER 57 n 58 SER 57 E LYS 58 n 59 LYS 58 E ASP 59 n 60 ASP 59 E TRP 60 n 61 TRP 60 E SER 61 n 62 SER 61 E PHE 62 n 63 PHE 62 E TYR 63 n 64 TYR 63 E ILE 64 n 65 ILE 64 E LEU 65 n 66 LEU 65 E ALA 66 n 67 ALA 66 E HIS 67 n 68 HIS 67 E THR 68 n 69 THR 68 E GLU 69 n 70 GLU 69 E PHE 70 n 71 PHE 70 E THR 71 n 72 THR 71 E PRO 72 n 73 PRO 72 E THR 73 n 74 THR 73 E GLU 74 n 75 GLU 74 E THR 75 n 76 THR 75 E ASP 76 n 77 ASP 76 E THR 77 n 78 THR 77 E TYR 78 n 79 TYR 78 E ALA 79 n 80 ALA 79 E CYS 80 n 81 CYS 80 E ARG 81 n 82 ARG 81 E VAL 82 n 83 VAL 82 E LYS 83 n 84 LYS 83 E HIS 84 n 85 HIS 84 E ASP 85 n 86 ASP 85 E SER 86 n 87 SER 86 E MET 87 n 88 MET 87 E ALA 88 n 89 ALA 88 E GLU 89 n 90 GLU 89 E PRO 90 n 91 PRO 90 E LYS 91 n 92 LYS 91 E THR 92 n 93 THR 92 E VAL 93 n 94 VAL 93 E TYR 94 n 95 TYR 94 E TRP 95 n 96 TRP 95 E ASP 96 n 97 ASP 96 E ARG 97 n 98 ARG 97 E ASP 98 n 99 ASP 98 E MET 99 n 100 MET 99 E SER 1 n 1 SER 1 F ALA 2 n 2 ALA 2 F VAL 3 n 3 VAL 3 F TYR 4 n 4 TYR 4 F ASN 5 n 5 ASN 5 F PHE 6 n 6 PHE 6 F ALA 7 n 7 ALA 7 F THR 8 n 8 THR 8 F MET 9 n 9 MET 9 F author_and_software_defined_assembly PISA 3 trimeric author_and_software_defined_assembly PISA 3 trimeric 4450 -20 18610 4430 -21 18650 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 46 A N GLU 45 A O ARG 35 A O ARG 34 A O PHE 36 A O PHE 35 A N SER 24 A N SER 23 A N TYR 27 A N TYR 26 A O ARG 6 A O ARG 5 A N SER 13 A N SER 12 A O HIS 93 A O HIS 92 A O ASP 102 A O ASP 101 A N LEU 110 A N LEU 109 A N TYR 118 A N TYR 117 A O ARG 121 A O ARG 120 A O ALA 125 A O ALA 124 A N THR 134 A N THR 133 A O HIS 192 A O HIS 191 A N THR 200 A N THR 199 A O PHE 208 A O PHE 207 A N PHE 241 A N PHE 240 A O SER 246 A O SER 245 A N GLU 229 A N GLU 228 A O HIS 192 A O HIS 191 A N THR 200 A N THR 199 A O PHE 208 A O PHE 207 A N PHE 241 A N PHE 240 A N GLN 242 A N GLN 241 A O ARG 234 A O ARG 233 A O GLN 218 A O GLN 217 A N THR 258 A N THR 257 A O VAL 261 A O VAL 260 A N LEU 270 A N LEU 269 B O TYR 10 B O TYR 11 B N ASN 24 B N ASN 25 B O PHE 30 B O PHE 31 B N PHE 62 B N PHE 63 B N HIS 67 B N HIS 68 B O GLU 50 B O GLU 51 B O TYR 10 B O TYR 11 B N ASN 24 B N ASN 25 B O PHE 30 B O PHE 31 B N PHE 62 B N PHE 63 B N TYR 63 B N TYR 64 B O SER 55 B O SER 56 B O LYS 44 B O LYS 45 B N LYS 41 B N LYS 42 B O LEU 40 B O LEU 41 B N ALA 79 B N ALA 80 B N VAL 82 B N VAL 83 B O LYS 91 B O LYS 92 D N GLU 46 D N GLU 45 D O ARG 35 D O ARG 34 D O PHE 36 D O PHE 35 D N SER 24 D N SER 23 D N TYR 27 D N TYR 26 D O ARG 6 D O ARG 5 D N SER 13 D N SER 12 D O HIS 93 D O HIS 92 D O ASP 102 D O ASP 101 D N LEU 110 D N LEU 109 D N TYR 118 D N TYR 117 D O ARG 121 D O ARG 120 D O ALA 125 D O ALA 124 D N THR 134 D N THR 133 D O HIS 192 D O HIS 191 D N THR 200 D N THR 199 D O PHE 208 D O PHE 207 D N PHE 241 D N PHE 240 D O SER 246 D O SER 245 D N GLU 229 D N GLU 228 D O HIS 192 D O HIS 191 D N THR 200 D N THR 199 D O PHE 208 D O PHE 207 D N PHE 241 D N PHE 240 D N GLN 242 D N GLN 241 D O ARG 234 D O ARG 233 D O GLN 218 D O GLN 217 D N THR 258 D N THR 257 D O VAL 261 D O VAL 260 D N LEU 270 D N LEU 269 E O TYR 10 E O TYR 11 E N ASN 24 E N ASN 25 E O PHE 30 E O PHE 31 E N PHE 62 E N PHE 63 E N HIS 67 E N HIS 68 E O GLU 50 E O GLU 51 E O TYR 10 E O TYR 11 E N ASN 24 E N ASN 25 E O PHE 30 E O PHE 31 E N PHE 62 E N PHE 63 E N TYR 63 E N TYR 64 E O SER 55 E O SER 56 E O LYS 44 E O LYS 45 E N LYS 41 E N LYS 42 E O LEU 40 E O LEU 41 E N ALA 79 E N ALA 80 E N VAL 82 E N VAL 83 E O LYS 91 E O LYS 92 1 D HOH 279 I HOH 0 N 1 D E NH2 O ARG MET 35 54 2.17 1 10.99 1.40 123.60 134.59 A A A CD NE CZ ARG ARG ARG 108 108 108 N 1 -7.68 0.50 120.30 112.62 A A A NE CZ NH1 ARG ARG ARG 108 108 108 N 1 7.16 0.50 120.30 127.46 A A A NE CZ NH2 ARG ARG ARG 108 108 108 N 1 3.31 0.50 120.30 123.61 A A A NE CZ NH2 ARG ARG ARG 194 194 194 N 1 9.63 1.40 123.60 133.23 D D D CD NE CZ ARG ARG ARG 108 108 108 N 1 6.52 0.50 120.30 126.82 D D D NE CZ NH1 ARG ARG ARG 108 108 108 N 1 -6.75 0.50 120.30 113.55 D D D NE CZ NH2 ARG ARG ARG 108 108 108 N 1 3.41 0.50 120.30 123.71 D D D NE CZ NH2 ARG ARG ARG 194 194 194 N 1 A PRO 43 -51.16 109.44 1 A LEU 114 -160.14 92.62 1 A LYS 131 -134.47 -37.66 1 A HIS 188 177.84 165.20 1 A PRO 193 -54.19 19.93 1 A ARG 194 -52.87 54.66 1 A SER 195 156.83 -175.07 1 A TYR 209 -170.66 140.77 1 A GLN 218 -176.55 113.06 1 A ASN 220 16.47 106.65 1 A ASP 227 165.06 17.78 1 B LYS 3 -172.83 126.93 1 B ASN 17 -38.18 125.44 1 B PRO 20 -50.88 172.73 1 B ASN 21 173.04 155.88 1 B HIS 31 -176.95 137.98 1 B PRO 33 -83.40 41.01 1 B ASN 42 70.55 52.57 1 B PRO 47 -67.81 -165.02 1 B LYS 48 20.35 68.53 1 B TRP 60 76.70 -21.76 1 B PHE 70 -147.88 -159.19 1 B THR 71 -167.94 118.61 1 B THR 73 -179.75 100.42 1 B GLU 74 18.81 -58.09 1 B ASP 85 -62.42 28.57 1 B ARG 97 -29.30 -30.77 1 C PHE 6 -100.10 -121.69 1 C THR 8 -59.18 172.93 1 D PRO 43 -51.99 108.97 1 D LYS 131 -135.06 -37.07 1 D PRO 193 -62.22 34.73 1 D ARG 194 -62.31 56.64 1 D SER 195 153.55 173.64 1 D TYR 209 -172.26 139.10 1 D GLN 218 -177.45 115.98 1 D ASN 220 1.66 105.14 1 D GLU 222 -57.48 176.59 1 D GLN 226 -91.72 39.61 1 D ASP 227 152.01 18.12 1 D GLN 255 -53.48 -9.98 1 D GLU 264 -74.34 25.65 1 E LYS 3 -172.60 127.37 1 E ASN 17 -38.58 125.61 1 E PRO 20 -50.86 172.77 1 E ASN 21 173.09 156.16 1 E HIS 31 -177.40 137.96 1 E PRO 33 -83.54 40.85 1 E PRO 47 -68.02 -164.88 1 E LYS 48 20.30 69.22 1 E TRP 60 76.72 -21.34 1 E PHE 70 -148.10 -159.37 1 E THR 71 -167.92 118.61 1 E THR 73 -179.65 100.03 1 E GLU 74 19.57 -58.21 1 E ASP 85 -61.95 28.47 1 E ARG 97 -29.30 -30.47 1 F PHE 6 -97.23 -125.49 PROTEIN_REP.PA PROTEIN.TOP 27.5 -1.78 -2.90 -2.14 3.71 -0.37 -1.93 Used Maximum Likelihood function 0.303 0.008 0.25 2.60 50.00 1304 25600 25600 5.1 96.5 RANDOM 885473.96 0.00 1 RESTRAINED THROUGHOUT 0.0 0.0 Engh & Huber FLAT MODEL 35.29 0.396 0.47 0.37 5.00 0.52 0.44 2.60 50.00 14 6302 0 0 6288 0.008 1.4 25.5 0.81 0.375 0.027 0.324 2.76 188 3919 6 4.6 93.2 21.0 2.6 50 1FFP 25600 25600 0.0 0.0 0.094 1 9.01 2.0 96.9 0.025 2.6 2.76 4107 2 95.2 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 0.5 MURINE CLASS I H-2:BETA-2 MICROGLOBULIN:PEPTIDE GP33 CRYSTAL STRUCTURE OF MURINE CLASS I H-2DB COMPLEXED WITH PEPTIDE GP33 (C9M/K1S) 1 N N 2 N N 3 N N 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N H-2Db heavy chain is noncovalently associated to Beat-2 microglobulin light chain. Heavy chain comprises of three subunits alpha1, alpha2 and alpha3. Peptide bind in the binding cleft formed by the alpha1 and alpha2 domains of heavy chain. A ALA 49 A ALA 48 HELX_P A GLU 55 A GLU 54 5 1 7 A GLY 56 A GLY 55 HELX_P A TYR 85 A TYR 84 1 2 30 A ASP 137 A ASP 136 HELX_P A SER 150 A SER 149 1 3 14 A GLY 151 A GLY 150 HELX_P A GLY 162 A GLY 161 1 4 12 A GLY 162 A GLY 161 HELX_P A ASN 176 A ASN 175 1 5 15 A GLY 175 A GLY 174 HELX_P A LEU 180 A LEU 179 1 6 6 A LYS 253 A LYS 252 HELX_P A ASN 256 A ASN 255 5 7 4 D ALA 49 D ALA 48 HELX_P D GLU 55 D GLU 54 5 8 7 D GLY 56 D GLY 55 HELX_P D TYR 85 D TYR 84 1 9 30 D ASP 137 D ASP 136 HELX_P D SER 150 D SER 149 1 10 14 D GLY 151 D GLY 150 HELX_P D GLY 162 D GLY 161 1 11 12 D GLY 162 D GLY 161 HELX_P D ASN 176 D ASN 175 1 12 15 D GLY 175 D GLY 174 HELX_P D LEU 180 D LEU 179 1 13 6 D LYS 253 D LYS 252 HELX_P D ASN 256 D ASN 255 5 14 4 disulf 2.029 A CYS 101 A SG CYS 100 1_555 A CYS 164 A SG CYS 163 1_555 disulf 2.029 A CYS 203 A SG CYS 202 1_555 A CYS 259 A SG CYS 258 1_555 disulf 2.030 B CYS 25 B SG CYS 26 1_555 B CYS 80 B SG CYS 81 1_555 disulf 2.029 D CYS 101 D SG CYS 100 1_555 D CYS 164 D SG CYS 163 1_555 disulf 2.027 D CYS 203 D SG CYS 202 1_555 D CYS 259 D SG CYS 258 1_555 disulf 2.028 E CYS 25 E SG CYS 26 1_555 E CYS 80 E SG CYS 81 1_555 IMMUNE SYSTEM/SIGNALING PROTEIN major histocompatibility complex, peptide binding, T cell receptor, IMMUNE SYSTEM-SIGNALING PROTEIN COMPLEX A TYR 209 A TYR 208 1 A PRO 210 A PRO 209 -0.29 B HIS 31 B HIS 32 1 B PRO 32 B PRO 33 -0.06 D TYR 209 D TYR 208 1 D PRO 210 D PRO 209 -0.13 E HIS 31 E HIS 32 1 E PRO 32 E PRO 33 0.13 HA11_MOUSE UNP 1 26 P01899 B2MG_MOUSE UNP 2 21 P01887 1FFP PDB 3 1FFP 26 298 1FFP 2 274 P01899 A 1 1 273 21 119 1FFP 1 99 P01887 B 2 2 100 26 298 1FFP 2 274 P01899 D 1 1 273 21 119 1FFP 1 99 P01887 E 2 2 100 1 9 1FFP 1 9 1FFP C 3 1 9 1 9 1FFP 1 9 1FFP F 3 1 9 8 4 4 3 4 4 4 8 4 4 3 4 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 46 A GLU 45 A PRO 47 A PRO 46 A LYS 31 A LYS 30 A ASP 37 A ASP 36 A ARG 21 A ARG 20 A VAL 28 A VAL 27 A SER 4 A SER 3 A SER 13 A SER 12 A HIS 93 A HIS 92 A LEU 103 A LEU 102 A LEU 109 A LEU 108 A TYR 118 A TYR 117 A ARG 121 A ARG 120 A LEU 126 A LEU 125 A TRP 133 A TRP 132 A ALA 135 A ALA 134 A LYS 186 A LYS 185 A HIS 192 A HIS 191 A VAL 199 A VAL 198 A PHE 208 A PHE 207 A PHE 241 A PHE 240 A VAL 249 A VAL 248 A MET 228 A MET 227 A LEU 230 A LEU 229 A LYS 186 A LYS 185 A HIS 192 A HIS 191 A VAL 199 A VAL 198 A PHE 208 A PHE 207 A PHE 241 A PHE 240 A VAL 249 A VAL 248 A ARG 234 A ARG 233 A PRO 235 A PRO 234 A THR 214 A THR 213 A GLN 218 A GLN 217 A THR 258 A THR 257 A TYR 262 A TYR 261 A LEU 270 A LEU 269 A ARG 273 A ARG 272 B GLN 6 B GLN 7 B SER 11 B SER 12 B ASN 21 B ASN 22 B PHE 30 B PHE 31 B PHE 62 B PHE 63 B PHE 70 B PHE 71 B GLU 50 B GLU 51 B MET 51 B MET 52 B GLN 6 B GLN 7 B SER 11 B SER 12 B ASN 21 B ASN 22 B PHE 30 B PHE 31 B PHE 62 B PHE 63 B PHE 70 B PHE 71 B SER 55 B SER 56 B PHE 56 B PHE 57 B LYS 44 B LYS 45 B LYS 45 B LYS 46 B GLU 36 B GLU 37 B LYS 41 B LYS 42 B TYR 78 B TYR 79 B LYS 83 B LYS 84 B LYS 91 B LYS 92 B TYR 94 B TYR 95 D GLU 46 D GLU 45 D PRO 47 D PRO 46 D LYS 31 D LYS 30 D ASP 37 D ASP 36 D ARG 21 D ARG 20 D VAL 28 D VAL 27 D SER 4 D SER 3 D SER 13 D SER 12 D HIS 93 D HIS 92 D LEU 103 D LEU 102 D LEU 109 D LEU 108 D TYR 118 D TYR 117 D ARG 121 D ARG 120 D LEU 126 D LEU 125 D TRP 133 D TRP 132 D ALA 135 D ALA 134 D LYS 186 D LYS 185 D HIS 192 D HIS 191 D VAL 199 D VAL 198 D PHE 208 D PHE 207 D PHE 241 D PHE 240 D VAL 249 D VAL 248 D MET 228 D MET 227 D LEU 230 D LEU 229 D LYS 186 D LYS 185 D HIS 192 D HIS 191 D VAL 199 D VAL 198 D PHE 208 D PHE 207 D PHE 241 D PHE 240 D VAL 249 D VAL 248 D ARG 234 D ARG 233 D PRO 235 D PRO 234 D THR 214 D THR 213 D GLN 218 D GLN 217 D THR 258 D THR 257 D TYR 262 D TYR 261 D LEU 270 D LEU 269 D ARG 273 D ARG 272 E GLN 6 E GLN 7 E SER 11 E SER 12 E ASN 21 E ASN 22 E PHE 30 E PHE 31 E PHE 62 E PHE 63 E PHE 70 E PHE 71 E GLU 50 E GLU 51 E MET 51 E MET 52 E GLN 6 E GLN 7 E SER 11 E SER 12 E ASN 21 E ASN 22 E PHE 30 E PHE 31 E PHE 62 E PHE 63 E PHE 70 E PHE 71 E SER 55 E SER 56 E PHE 56 E PHE 57 E LYS 44 E LYS 45 E LYS 45 E LYS 46 E GLU 36 E GLU 37 E LYS 41 E LYS 42 E TYR 78 E TYR 79 E LYS 83 E LYS 84 E LYS 91 E LYS 92 E TYR 94 E TYR 95 1 P 1