1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Banci, L.
Bertini, I.
Bren, K.L.
Gray, H.B.
Sompornpisut, P.
Turano, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C N -1
26.017
CYANIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H32 Fe N4 O4
616.487
PROTOPORPHYRIN IX CONTAINING FE
HEME
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H21 N2 O2 1
189.275
n
N-TRIMETHYLLYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
34
11385
11398
10.1021/bi00036a011
7547866
Three-Dimensional Solution Structure of the Cyanide Adduct of a met80Ala Variant of Saccharomyces Cerevisiae Iso-1-Cytochrome C. Identification of Ligand-Residue Interactions in the Distal Heme Cavity
1995
To be Published
0353
Paramagnetic 1H NMR Spectroscopy of the Cyanide Derivative of met80Ala-Iso-1-Cytochrome C
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
90
11456
Structurally Engineered Cytochromes with Unusual Ligand-Binding Properties: Expression of Saccharomyces Cerevisiae met80-->Ala Iso-1-Cytochrome C
1993
10.2210/pdb1fhb/pdb
pdb_00001fhb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
CYANIDE ADDUCT OF ALA 80, ISOZYME 1, OXIDIZED FORM
12029.713
FERRICYTOCHROME C
H39Q, M80A, C102S
1
man
polymer
26.017
CYANIDE ION
1
syn
non-polymer
616.487
PROTOPORPHYRIN IX CONTAINING FE
1
syn
non-polymer
MET80ALA-ISO-1-FERRICYTOCHROME C (ISOZYME 1)
no
yes
TEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRQSGQAEGYSYTDANIKKNVLWDENNMSEYLTNP
(M3L)KYIPGTKAAFGGLKKEKDRNDLITYLKKASE
TEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRQSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYI
PGTKAAFGGLKKEKDRNDLITYLKKASE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
GM3C2
baker's yeast
Saccharomyces
sample
4932
Saccharomyces cerevisiae
H39Q, M80A, C102S
YEAST ISO-1-CYTOCHROME C (CYC1)
4932
Saccharomyces cerevisiae
YEP213-LEU58HISCYC1
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1995-09-15
1
1
2008-03-21
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1995-06-16
REL
CYN
CYANIDE ION
HEM
PROTOPORPHYRIN IX CONTAINING FE
17
GUENTERT,BRAUN,WUTHRICH
refinement
DIANA
PEARLMAN,CASE,CALDWELL,SIEBEL,SINGH,WEINER,KOLLMAN
refinement
Amber
4.0
CYN
105
2
CYN
CYN
105
A
HEM
104
3
HEM
HEM
104
A
THR
-5
n
1
THR
-5
A
GLU
-4
n
2
GLU
-4
A
PHE
-3
n
3
PHE
-3
A
LYS
-2
n
4
LYS
-2
A
ALA
-1
n
5
ALA
-1
A
GLY
1
n
6
GLY
1
A
SER
2
n
7
SER
2
A
ALA
3
n
8
ALA
3
A
LYS
4
n
9
LYS
4
A
LYS
5
n
10
LYS
5
A
GLY
6
n
11
GLY
6
A
ALA
7
n
12
ALA
7
A
THR
8
n
13
THR
8
A
LEU
9
n
14
LEU
9
A
PHE
10
n
15
PHE
10
A
LYS
11
n
16
LYS
11
A
THR
12
n
17
THR
12
A
ARG
13
n
18
ARG
13
A
CYS
14
n
19
CYS
14
A
LEU
15
n
20
LEU
15
A
GLN
16
n
21
GLN
16
A
CYS
17
n
22
CYS
17
A
HIS
18
n
23
HIS
18
A
THR
19
n
24
THR
19
A
VAL
20
n
25
VAL
20
A
GLU
21
n
26
GLU
21
A
LYS
22
n
27
LYS
22
A
GLY
23
n
28
GLY
23
A
GLY
24
n
29
GLY
24
A
PRO
25
n
30
PRO
25
A
HIS
26
n
31
HIS
26
A
LYS
27
n
32
LYS
27
A
VAL
28
n
33
VAL
28
A
GLY
29
n
34
GLY
29
A
PRO
30
n
35
PRO
30
A
ASN
31
n
36
ASN
31
A
LEU
32
n
37
LEU
32
A
HIS
33
n
38
HIS
33
A
GLY
34
n
39
GLY
34
A
ILE
35
n
40
ILE
35
A
PHE
36
n
41
PHE
36
A
GLY
37
n
42
GLY
37
A
ARG
38
n
43
ARG
38
A
GLN
39
n
44
GLN
39
A
SER
40
n
45
SER
40
A
GLY
41
n
46
GLY
41
A
GLN
42
n
47
GLN
42
A
ALA
43
n
48
ALA
43
A
GLU
44
n
49
GLU
44
A
GLY
45
n
50
GLY
45
A
TYR
46
n
51
TYR
46
A
SER
47
n
52
SER
47
A
TYR
48
n
53
TYR
48
A
THR
49
n
54
THR
49
A
ASP
50
n
55
ASP
50
A
ALA
51
n
56
ALA
51
A
ASN
52
n
57
ASN
52
A
ILE
53
n
58
ILE
53
A
LYS
54
n
59
LYS
54
A
LYS
55
n
60
LYS
55
A
ASN
56
n
61
ASN
56
A
VAL
57
n
62
VAL
57
A
LEU
58
n
63
LEU
58
A
TRP
59
n
64
TRP
59
A
ASP
60
n
65
ASP
60
A
GLU
61
n
66
GLU
61
A
ASN
62
n
67
ASN
62
A
ASN
63
n
68
ASN
63
A
MET
64
n
69
MET
64
A
SER
65
n
70
SER
65
A
GLU
66
n
71
GLU
66
A
TYR
67
n
72
TYR
67
A
LEU
68
n
73
LEU
68
A
THR
69
n
74
THR
69
A
ASN
70
n
75
ASN
70
A
PRO
71
n
76
PRO
71
A
LYS
72
n
77
M3L
72
A
LYS
73
n
78
LYS
73
A
TYR
74
n
79
TYR
74
A
ILE
75
n
80
ILE
75
A
PRO
76
n
81
PRO
76
A
GLY
77
n
82
GLY
77
A
THR
78
n
83
THR
78
A
LYS
79
n
84
LYS
79
A
ALA
80
n
85
ALA
80
A
ALA
81
n
86
ALA
81
A
PHE
82
n
87
PHE
82
A
GLY
83
n
88
GLY
83
A
GLY
84
n
89
GLY
84
A
LEU
85
n
90
LEU
85
A
LYS
86
n
91
LYS
86
A
LYS
87
n
92
LYS
87
A
GLU
88
n
93
GLU
88
A
LYS
89
n
94
LYS
89
A
ASP
90
n
95
ASP
90
A
ARG
91
n
96
ARG
91
A
ASN
92
n
97
ASN
92
A
ASP
93
n
98
ASP
93
A
LEU
94
n
99
LEU
94
A
ILE
95
n
100
ILE
95
A
THR
96
n
101
THR
96
A
TYR
97
n
102
TYR
97
A
LEU
98
n
103
LEU
98
A
LYS
99
n
104
LYS
99
A
LYS
100
n
105
LYS
100
A
ALA
101
n
106
ALA
101
A
SER
102
n
107
SER
102
A
GLU
103
n
108
GLU
103
A
author_defined_assembly
1
monomeric
A
HIS
18
A
NE2
HIS
23
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NA
HEM
1_555
89.7
A
HIS
18
A
NE2
HIS
23
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NB
HEM
1_555
88.7
A
HEM
104
C
NA
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NB
HEM
1_555
90.7
A
HIS
18
A
NE2
HIS
23
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NC
HEM
1_555
92.2
A
HEM
104
C
NA
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NC
HEM
1_555
177.7
A
HEM
104
C
NB
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
NC
HEM
1_555
90.5
A
HIS
18
A
NE2
HIS
23
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
ND
HEM
1_555
89.7
A
HEM
104
C
NA
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
ND
HEM
1_555
89.0
A
HEM
104
C
NB
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
ND
HEM
1_555
178.4
A
HEM
104
C
NC
HEM
1_555
A
HEM
104
C
FE
HEM
1_555
A
HEM
104
C
ND
HEM
1_555
89.8
A
M3L
72
N-TRIMETHYLLYSINE
A
M3L
77
LYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
SG
CAB
CYS
HEM
14
104
1.82
1
A
A
SG
CAC
CYS
HEM
17
104
1.82
1
A
A
C
FE
CYN
HEM
105
104
1.86
2
A
A
SG
CAC
CYS
HEM
17
104
1.81
2
A
A
SG
CAB
CYS
HEM
14
104
1.82
2
A
A
C
FE
CYN
HEM
105
104
1.85
3
A
A
SG
CAC
CYS
HEM
17
104
1.82
3
A
A
SG
CAB
CYS
HEM
14
104
1.82
3
A
A
C
FE
CYN
HEM
105
104
1.84
4
A
A
SG
CAC
CYS
HEM
17
104
1.81
4
A
A
SG
CAB
CYS
HEM
14
104
1.81
4
A
A
C
FE
CYN
HEM
105
104
1.84
5
A
A
SG
CAC
CYS
HEM
17
104
1.82
5
A
A
SG
CAB
CYS
HEM
14
104
1.82
5
A
A
C
FE
CYN
HEM
105
104
1.85
6
A
A
SG
CAB
CYS
HEM
14
104
1.81
6
A
A
SG
CAC
CYS
HEM
17
104
1.82
6
A
A
C
FE
CYN
HEM
105
104
1.85
7
A
A
SG
CAB
CYS
HEM
14
104
1.81
7
A
A
SG
CAC
CYS
HEM
17
104
1.82
7
A
A
C
FE
CYN
HEM
105
104
1.86
8
A
A
SG
CAB
CYS
HEM
14
104
1.82
8
A
A
SG
CAC
CYS
HEM
17
104
1.82
8
A
A
C
FE
CYN
HEM
105
104
1.85
9
A
A
SG
CAB
CYS
HEM
14
104
1.81
9
A
A
SG
CAC
CYS
HEM
17
104
1.82
9
A
A
C
FE
CYN
HEM
105
104
1.86
10
A
A
SG
CAB
CYS
HEM
14
104
1.82
10
A
A
SG
CAC
CYS
HEM
17
104
1.82
10
A
A
C
FE
CYN
HEM
105
104
1.86
11
A
A
SG
CAB
CYS
HEM
14
104
1.82
11
A
A
SG
CAC
CYS
HEM
17
104
1.82
11
A
A
C
FE
CYN
HEM
105
104
1.86
12
A
A
SG
CAB
CYS
HEM
14
104
1.81
12
A
A
SG
CAC
CYS
HEM
17
104
1.82
12
A
A
C
FE
CYN
HEM
105
104
1.84
13
A
A
SG
CAB
CYS
HEM
14
104
1.81
13
A
A
SG
CAC
CYS
HEM
17
104
1.82
13
A
A
C
FE
CYN
HEM
105
104
1.85
14
A
A
SG
CAC
CYS
HEM
17
104
1.82
14
A
A
SG
CAB
CYS
HEM
14
104
1.82
14
A
A
C
FE
CYN
HEM
105
104
1.85
15
A
A
SG
CAC
CYS
HEM
17
104
1.82
15
A
A
SG
CAB
CYS
HEM
14
104
1.82
15
A
A
C
FE
CYN
HEM
105
104
1.85
16
A
A
SG
CAC
CYS
HEM
17
104
1.82
16
A
A
SG
CAB
CYS
HEM
14
104
1.82
16
A
A
C
FE
CYN
HEM
105
104
1.85
17
A
A
SG
CAB
CYS
HEM
14
104
1.81
17
A
A
SG
CAC
CYS
HEM
17
104
1.82
17
A
A
C
FE
CYN
HEM
105
104
1.86
1
A
TYR
48
0.169
SIDE CHAIN
1
A
TYR
67
0.093
SIDE CHAIN
1
A
PHE
82
0.099
SIDE CHAIN
2
A
HIS
33
0.103
SIDE CHAIN
2
A
TYR
67
0.116
SIDE CHAIN
2
A
TYR
74
0.088
SIDE CHAIN
2
A
PHE
82
0.091
SIDE CHAIN
2
A
ARG
91
0.114
SIDE CHAIN
2
A
TYR
97
0.074
SIDE CHAIN
3
A
TYR
48
0.156
SIDE CHAIN
3
A
TYR
67
0.104
SIDE CHAIN
3
A
TYR
97
0.064
SIDE CHAIN
4
A
ARG
13
0.082
SIDE CHAIN
4
A
PHE
36
0.085
SIDE CHAIN
4
A
TYR
67
0.100
SIDE CHAIN
5
A
TYR
67
0.098
SIDE CHAIN
5
A
TYR
74
0.184
SIDE CHAIN
6
A
TYR
48
0.152
SIDE CHAIN
6
A
TYR
67
0.116
SIDE CHAIN
6
A
TYR
74
0.074
SIDE CHAIN
6
A
ARG
91
0.117
SIDE CHAIN
7
A
PHE
10
0.079
SIDE CHAIN
7
A
TYR
48
0.177
SIDE CHAIN
7
A
TYR
67
0.134
SIDE CHAIN
8
A
TYR
48
0.182
SIDE CHAIN
8
A
TYR
67
0.093
SIDE CHAIN
8
A
PHE
82
0.095
SIDE CHAIN
9
A
TYR
48
0.156
SIDE CHAIN
9
A
TYR
67
0.108
SIDE CHAIN
10
A
ARG
38
0.078
SIDE CHAIN
10
A
TYR
48
0.117
SIDE CHAIN
10
A
TYR
67
0.095
SIDE CHAIN
10
A
TYR
74
0.066
SIDE CHAIN
10
A
PHE
82
0.126
SIDE CHAIN
11
A
PHE
36
0.078
SIDE CHAIN
11
A
TYR
48
0.101
SIDE CHAIN
11
A
TYR
67
0.090
SIDE CHAIN
12
A
PHE
10
0.082
SIDE CHAIN
12
A
TYR
48
0.158
SIDE CHAIN
12
A
TYR
67
0.081
SIDE CHAIN
12
A
TYR
74
0.066
SIDE CHAIN
13
A
TYR
48
0.133
SIDE CHAIN
13
A
TYR
67
0.108
SIDE CHAIN
13
A
TYR
74
0.086
SIDE CHAIN
13
A
ARG
91
0.100
SIDE CHAIN
14
A
TYR
48
0.172
SIDE CHAIN
14
A
TYR
67
0.088
SIDE CHAIN
15
A
PHE
-3
0.081
SIDE CHAIN
15
A
ARG
13
0.090
SIDE CHAIN
15
A
ARG
38
0.087
SIDE CHAIN
15
A
TYR
48
0.195
SIDE CHAIN
15
A
TYR
67
0.113
SIDE CHAIN
15
A
PHE
82
0.084
SIDE CHAIN
15
A
ARG
91
0.109
SIDE CHAIN
16
A
ARG
13
0.108
SIDE CHAIN
16
A
TYR
48
0.077
SIDE CHAIN
16
A
TYR
67
0.104
SIDE CHAIN
16
A
PHE
82
0.122
SIDE CHAIN
17
A
TYR
48
0.094
SIDE CHAIN
17
A
TYR
67
0.125
SIDE CHAIN
2
-5.50
0.60
121.00
115.50
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
3
-5.94
0.60
121.00
115.06
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
4
-4.05
0.60
121.00
116.95
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
5
-4.68
0.60
121.00
116.32
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
6
-5.26
0.60
121.00
115.74
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
7
-6.43
0.60
121.00
114.57
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
10
-6.28
0.60
121.00
114.72
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
11
-4.92
0.60
121.00
116.08
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
11
-38.56
2.10
120.10
81.54
A
A
A
CA
C
O
GLU
GLU
GLU
103
103
103
N
12
-4.84
0.60
121.00
116.16
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
13
-5.03
0.60
121.00
115.97
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
15
-5.01
0.60
121.00
115.99
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
16
-6.14
0.60
121.00
114.86
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
17
-6.20
0.60
121.00
114.80
A
A
A
CB
CG
CD2
TYR
TYR
TYR
48
48
48
N
1
A
LYS
5
76.32
-54.86
1
A
LYS
27
-58.79
-84.13
1
A
PRO
30
-66.93
-177.31
1
A
SER
47
-69.49
82.31
1
A
ASN
56
-28.46
106.10
1
A
ASN
70
-159.42
63.99
1
A
ALA
80
-66.56
77.44
1
A
LEU
85
-65.73
90.68
1
A
GLU
88
81.93
-47.13
2
A
LYS
5
76.71
-54.95
2
A
ARG
13
-142.04
-71.62
2
A
LYS
27
-89.11
-110.59
2
A
PHE
36
-67.28
86.90
2
A
LYS
55
-103.70
44.36
2
A
ASN
56
-41.28
107.45
2
A
TRP
59
60.93
63.83
2
A
ALA
80
-61.51
88.26
2
A
LEU
85
-118.26
54.30
2
A
GLU
88
77.16
-39.30
3
A
ALA
3
64.85
-60.60
3
A
LYS
4
-69.56
-175.17
3
A
LYS
5
73.64
-60.96
3
A
ARG
13
-140.57
-76.54
3
A
LYS
27
-76.32
-98.18
3
A
PHE
36
-66.06
98.95
3
A
GLU
44
-49.00
162.77
3
A
LYS
55
-89.18
49.29
3
A
ASN
56
-55.18
74.23
3
A
ASN
70
-164.43
80.47
3
A
ALA
80
-68.57
86.94
3
A
GLU
88
84.34
-44.59
4
A
LYS
5
72.61
-53.21
4
A
LYS
27
-62.77
-94.11
4
A
LEU
32
-87.99
42.11
4
A
PHE
36
-58.29
107.62
4
A
ARG
38
-86.75
-110.17
4
A
GLU
44
-89.97
-120.90
4
A
LYS
55
-96.08
35.14
4
A
ASN
56
-39.47
102.07
4
A
TRP
59
67.11
76.14
4
A
ASN
70
-170.13
87.52
4
A
ALA
81
-164.08
103.29
4
A
LYS
87
-11.07
-58.73
4
A
GLU
88
80.54
-44.31
5
A
PHE
-3
-67.21
87.58
5
A
SER
2
-79.40
-163.08
5
A
LYS
5
94.89
-61.89
5
A
ARG
13
-133.57
-58.00
5
A
LYS
27
-54.58
-82.26
5
A
GLU
44
-105.97
-73.97
5
A
TYR
48
-79.60
-168.71
5
A
ASN
56
-23.98
99.67
5
A
ASN
70
-162.86
81.24
5
A
ALA
80
-64.40
87.07
5
A
GLU
88
78.40
-53.65
6
A
GLU
-4
-165.76
117.01
6
A
LYS
5
75.69
-56.82
6
A
ARG
13
-134.98
-61.29
6
A
LYS
27
-57.01
-80.85
6
A
PRO
30
-65.59
-178.55
6
A
SER
47
-68.59
77.36
6
A
LYS
55
-94.19
42.00
6
A
ASN
56
-46.67
88.66
6
A
TRP
59
55.38
75.62
6
A
ASN
70
-151.47
70.89
6
A
ALA
81
-162.29
83.10
6
A
GLU
88
77.18
-39.68
7
A
LYS
5
73.19
-54.73
7
A
ARG
13
-142.80
-61.78
7
A
LYS
27
-67.64
-96.10
7
A
LEU
32
-91.02
40.95
7
A
GLU
44
-55.63
172.55
7
A
TYR
48
-79.01
-168.36
7
A
ASN
56
-19.39
98.20
7
A
TRP
59
66.95
82.41
7
A
ASN
70
-156.22
80.43
7
A
ALA
80
-39.08
128.10
7
A
LEU
85
-67.91
81.56
7
A
LYS
87
-69.81
83.63
8
A
LYS
5
77.47
-53.85
8
A
ARG
13
-140.62
-71.13
8
A
LYS
27
-42.89
-73.14
8
A
GLN
39
-49.90
161.36
8
A
SER
47
-69.96
78.78
8
A
TRP
59
67.79
91.81
8
A
ASN
70
-153.45
84.92
8
A
ALA
80
-61.26
83.68
8
A
LEU
85
-69.55
77.06
8
A
GLU
88
78.17
-40.19
9
A
ALA
3
67.30
-61.48
9
A
LYS
5
74.69
-59.99
9
A
ARG
13
-138.68
-39.06
9
A
LYS
27
-82.27
-91.98
9
A
PRO
30
-67.67
-176.58
9
A
ASN
56
-27.45
86.75
9
A
TRP
59
55.30
76.46
9
A
ASN
70
-155.05
76.67
9
A
LYS
87
-55.14
99.16
10
A
LYS
5
75.61
-56.32
10
A
ARG
13
-131.83
-46.88
10
A
LYS
27
-73.02
-101.77
10
A
PHE
36
-59.31
105.59
10
A
GLN
39
-49.66
156.44
10
A
LYS
55
-93.76
40.46
10
A
ASN
56
-42.58
89.78
10
A
TRP
59
62.97
80.65
10
A
ASN
70
-152.47
74.17
10
A
ALA
80
-65.60
81.08
10
A
LYS
86
-156.95
-58.82
10
A
LYS
87
-35.35
-28.24
10
A
GLU
88
85.48
-50.45
11
A
ALA
3
63.86
-63.49
11
A
LYS
4
-74.08
-168.35
11
A
LYS
5
72.35
-60.73
11
A
ARG
13
-140.61
-61.09
11
A
LYS
22
-58.20
98.34
11
A
LYS
27
-50.74
-78.14
11
A
ALA
43
-68.10
79.54
11
A
GLU
44
-66.18
70.16
11
A
LYS
55
-92.11
31.59
11
A
ASN
56
-33.02
98.26
11
A
TRP
59
63.40
101.91
11
A
ASN
70
-161.91
81.34
11
A
GLU
88
75.71
-49.58
11
A
SER
102
-93.13
33.97
12
A
ALA
3
62.24
-66.41
12
A
LYS
4
-73.43
-161.63
12
A
LYS
5
75.93
-55.86
12
A
LYS
27
-59.04
-91.10
12
A
GLN
42
-142.42
38.62
12
A
SER
47
-67.83
80.01
12
A
LYS
55
-90.58
30.56
12
A
ASN
56
-37.51
98.08
12
A
ASN
70
-154.75
77.66
12
A
ALA
80
-65.10
92.83
12
A
LYS
86
-120.82
-51.90
13
A
GLU
-4
-164.86
-68.00
13
A
ALA
-1
-49.26
150.69
13
A
LYS
5
77.66
-61.08
13
A
LYS
22
-58.77
99.51
13
A
LYS
27
-53.73
-82.20
13
A
PHE
36
-66.13
98.16
13
A
GLU
44
-57.81
172.89
13
A
LYS
55
-94.45
39.19
13
A
ASN
56
-47.41
64.51
13
A
ASN
70
-152.59
84.89
13
A
ALA
80
-63.13
81.67
13
A
LYS
86
-147.98
-54.22
14
A
GLU
-4
-163.20
-65.49
14
A
LYS
5
77.24
-54.98
14
A
ARG
13
-143.19
-74.21
14
A
LYS
22
-65.70
98.55
14
A
LYS
27
-85.04
-105.39
14
A
PRO
30
-68.35
-176.64
14
A
PHE
36
-61.31
92.45
14
A
GLN
42
-147.66
36.58
14
A
ALA
43
-158.25
59.21
14
A
SER
47
-69.85
81.27
14
A
ASN
56
-47.43
87.93
14
A
ASN
70
-168.53
68.25
14
A
ALA
80
-64.55
83.68
14
A
GLU
88
79.83
-41.60
15
A
LYS
5
74.16
-52.64
15
A
LYS
27
-55.03
-80.28
15
A
PRO
30
-68.64
-177.13
15
A
GLN
42
-140.08
40.27
15
A
SER
47
-69.75
75.16
15
A
ASN
56
-40.87
94.28
15
A
ALA
80
-61.99
78.95
15
A
GLU
88
77.08
-40.60
16
A
ALA
3
67.11
-61.57
16
A
LYS
4
-68.20
-172.95
16
A
LYS
5
75.20
-61.55
16
A
ARG
13
-123.46
-63.82
16
A
LYS
27
-73.86
-102.41
16
A
LYS
55
-88.70
35.60
16
A
ASN
56
-28.31
100.66
16
A
TRP
59
67.45
72.64
16
A
ASN
70
-164.82
73.29
16
A
ALA
80
-63.19
81.43
16
A
LEU
85
-69.45
78.85
16
A
GLU
88
79.97
-47.24
17
A
ALA
3
69.32
-63.10
17
A
LYS
5
77.88
-55.37
17
A
LYS
27
-50.96
-77.83
17
A
SER
47
-67.21
91.48
17
A
ASN
56
-25.63
99.95
17
A
ASN
70
-159.55
80.71
17
A
ALA
81
-167.00
93.09
17
A
LYS
87
-67.99
99.12
THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE CYANIDE ADDUCT OF A MET80ALA VARIANT OF SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C. IDENTIFICATION OF LIGAND-RESIDUE INTERACTIONS IN THE DISTAL HEME CAVITY
1
Y
N
2
N
N
3
N
N
A
GLY
6
A
GLY
11
HELX_P
A
ARG
13
A
ARG
18
1
1
8
A
ASP
50
A
ASP
55
HELX_P
A
LYS
54
A
LYS
59
1
2
5
A
GLU
61
A
GLU
66
HELX_P
A
THR
69
A
THR
74
1
3
9
A
PRO
71
A
PRO
76
HELX_P
A
TYR
74
A
TYR
79
1
4
4
A
LYS
89
A
LYS
94
HELX_P
A
ALA
101
A
ALA
106
1
5
13
covale
1.331
both
A
PRO
71
A
C
PRO
76
1_555
A
M3L
72
A
N
M3L
77
1_555
covale
1.338
both
A
M3L
72
A
C
M3L
77
1_555
A
LYS
73
A
N
LYS
78
1_555
metalc
1.958
A
HIS
18
A
NE2
HIS
23
1_555
A
HEM
104
C
FE
HEM
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT
CYC1_YEAST
UNP
1
1
P00044
TEFKAGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYI
PGTKMAFGGLKKEKDRNDLITYLKKACE
1
108
1FHB
-5
103
P00044
A
1
1
108
1
HIS
conflict
GLN
39
1FHB
A
P00044
UNP
44
44
1
MET
conflict
ALA
80
1FHB
A
P00044
UNP
85
85
1
CYS
conflict
SER
102
1FHB
A
P00044
UNP
107
107
BINDING SITE FOR RESIDUE CYN A 105
A
CYN
105
Software
4
BINDING SITE FOR RESIDUE HEM A 104
A
HEM
104
Software
27
A
TYR
67
A
TYR
72
4
1_555
A
PRO
71
A
PRO
76
4
1_555
A
ALA
80
A
ALA
85
4
1_555
A
HEM
104
C
HEM
4
1_555
A
ARG
13
A
ARG
18
27
1_555
A
CYS
14
A
CYS
19
27
1_555
A
GLN
16
A
GLN
21
27
1_555
A
CYS
17
A
CYS
22
27
1_555
A
HIS
18
A
HIS
23
27
1_555
A
VAL
28
A
VAL
33
27
1_555
A
GLY
29
A
GLY
34
27
1_555
A
PRO
30
A
PRO
35
27
1_555
A
LEU
32
A
LEU
37
27
1_555
A
ILE
35
A
ILE
40
27
1_555
A
SER
40
A
SER
45
27
1_555
A
GLY
41
A
GLY
46
27
1_555
A
TYR
46
A
TYR
51
27
1_555
A
THR
49
A
THR
54
27
1_555
A
ASN
52
A
ASN
57
27
1_555
A
TRP
59
A
TRP
64
27
1_555
A
MET
64
A
MET
69
27
1_555
A
TYR
67
A
TYR
72
27
1_555
A
LEU
68
A
LEU
73
27
1_555
A
GLY
77
A
GLY
82
27
1_555
A
THR
78
A
THR
83
27
1_555
A
ALA
80
A
ALA
85
27
1_555
A
PHE
82
A
PHE
87
27
1_555
A
LEU
85
A
LEU
90
27
1_555
A
LEU
94
A
LEU
99
27
1_555
A
LEU
98
A
LEU
103
27
1_555
A
CYN
105
B
CYN
27
1_555
1
P 1