1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Engler, A.
Stangler, T.
Willbold, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
268
389
395
10.1046/j.1432-1033.2001.01895.x
11168374
Solution structure of human immunodeficiency virus type 1 Vpr(13-33) peptide in micelles.
2001
10.2210/pdb1fi0/pdb
pdb_00001fi0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2614.879
VPR PROTEIN
1
syn
polymer
R ORF PROTEIN
no
yes
(ACE)EPYNEWTLELLEELKSEAVRH
XEPYNEWTLELLEELKSEAVRH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-02-28
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-08-03
REL
The protein was chemically synthesized. The sequence is naturally found in Human immunodeficiency virus type 1 (RF/HAT isolate).
sample
structures with the least restraint violations, structures with the lowest energy
160
22
2D NOESY
4
ambient
298
K
Modified ab initio simulated annealing protocol which includes floating assignment of prochiral groups
simulated annealing
2.2mM Vpr(13-33); 100mM DPC;
90% H20, 10%D20
90% H2O/10% D2O
collection
VNMR
5.3
Franz Herrmann
data analysis
NDEE
Brunger
refinement
X-PLOR
3.851
600
Varian
INOVA
ACE
12
n
1
ACE
12
A
GLU
13
n
2
GLU
13
A
PRO
14
n
3
PRO
14
A
TYR
15
n
4
TYR
15
A
ASN
16
n
5
ASN
16
A
GLU
17
n
6
GLU
17
A
TRP
18
n
7
TRP
18
A
THR
19
n
8
THR
19
A
LEU
20
n
9
LEU
20
A
GLU
21
n
10
GLU
21
A
LEU
22
n
11
LEU
22
A
LEU
23
n
12
LEU
23
A
GLU
24
n
13
GLU
24
A
GLU
25
n
14
GLU
25
A
LEU
26
n
15
LEU
26
A
LYS
27
n
16
LYS
27
A
SER
28
n
17
SER
28
A
GLU
29
n
18
GLU
29
A
ALA
30
n
19
ALA
30
A
VAL
31
n
20
VAL
31
A
ARG
32
n
21
ARG
32
A
HIS
33
n
22
HIS
33
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
LYS
VAL
27
31
1.54
2
A
A
O
H
LYS
VAL
27
31
1.57
3
A
A
O
H
LYS
VAL
27
31
1.58
4
A
A
O
H
LYS
VAL
27
31
1.59
4
A
A
O
H
LEU
LEU
23
26
1.60
5
A
A
O
H
LYS
VAL
27
31
1.55
5
A
A
O
H
GLU
HIS
29
33
1.56
6
A
A
O
H
LYS
VAL
27
31
1.50
7
A
A
O
H
TRP
LEU
18
22
1.59
9
A
A
O
H
LYS
VAL
27
31
1.49
10
A
A
O
H
LYS
VAL
27
31
1.52
11
A
A
O
H
TYR
TRP
15
18
1.49
11
A
A
O
H
LYS
VAL
27
31
1.52
12
A
A
O
H
LYS
VAL
27
31
1.56
13
A
A
O
H
LYS
VAL
27
31
1.58
14
A
A
O
H
LYS
VAL
27
31
1.50
15
A
A
O
H
LYS
VAL
27
31
1.50
16
A
A
O
H
LYS
VAL
27
31
1.48
17
A
A
O
H
LYS
VAL
27
31
1.49
18
A
A
O
H
LYS
VAL
27
31
1.53
18
A
A
O
H
ASN
LEU
16
20
1.60
19
A
A
O
H
LYS
VAL
27
31
1.50
20
A
A
O
H
LYS
VAL
27
31
1.55
21
A
A
O
H
LYS
VAL
27
31
1.53
2
A
ARG
32
0.138
SIDE CHAIN
3
A
ARG
32
0.285
SIDE CHAIN
4
A
ARG
32
0.270
SIDE CHAIN
5
A
ARG
32
0.184
SIDE CHAIN
6
A
ARG
32
0.291
SIDE CHAIN
7
A
ARG
32
0.301
SIDE CHAIN
8
A
ARG
32
0.316
SIDE CHAIN
9
A
ARG
32
0.193
SIDE CHAIN
10
A
ARG
32
0.303
SIDE CHAIN
12
A
ARG
32
0.266
SIDE CHAIN
13
A
ARG
32
0.216
SIDE CHAIN
14
A
ARG
32
0.216
SIDE CHAIN
15
A
ARG
32
0.293
SIDE CHAIN
16
A
ARG
32
0.188
SIDE CHAIN
17
A
ARG
32
0.317
SIDE CHAIN
18
A
ARG
32
0.204
SIDE CHAIN
19
A
ARG
32
0.315
SIDE CHAIN
20
A
ARG
32
0.153
SIDE CHAIN
21
A
ARG
32
0.268
SIDE CHAIN
22
A
ARG
32
0.194
SIDE CHAIN
3
A
ASN
16
44.86
82.40
8
A
GLU
17
59.43
18.67
11
A
ASN
16
41.95
-87.12
17
A
ASN
16
38.53
71.88
17
A
GLU
17
58.38
19.55
22
A
ASN
16
-22.16
-53.67
SOLUTION STRUCTURE OF HIV-1 VPR (13-33) PEPTIDE IN MICELLS
1
N
N
A
GLU
13
A
GLU
2
HELX_P
A
HIS
33
A
HIS
22
1
1
21
covale
1.305
both
A
ACE
12
A
C
ACE
1
1_555
A
GLU
13
A
N
GLU
2
1_555
VIRAL PROTEIN
helix, Viral protein
VPR_HV1RH
UNP
1
13
P05954
EPYNEWTLELLEELKSEAVRH
13
33
1FI0
13
33
P05954
A
1
2
22
BINDING SITE FOR RESIDUE ACE A 12
A
ACE
12
Software
1
A
PRO
14
A
PRO
3
1
1_555
1
P 1