1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Engler, A. Stangler, T. Willbold, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking IX Eur.J.Biochem. EJBCAI 0262 0014-2956 268 389 395 10.1046/j.1432-1033.2001.01895.x 11168374 Solution structure of human immunodeficiency virus type 1 Vpr(13-33) peptide in micelles. 2001 10.2210/pdb1fi0/pdb pdb_00001fi0 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2614.879 VPR PROTEIN 1 syn polymer R ORF PROTEIN no yes (ACE)EPYNEWTLELLEELKSEAVRH XEPYNEWTLELLEELKSEAVRH A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-02-28 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2000-08-03 REL The protein was chemically synthesized. The sequence is naturally found in Human immunodeficiency virus type 1 (RF/HAT isolate). sample structures with the least restraint violations, structures with the lowest energy 160 22 2D NOESY 4 ambient 298 K Modified ab initio simulated annealing protocol which includes floating assignment of prochiral groups simulated annealing 2.2mM Vpr(13-33); 100mM DPC; 90% H20, 10%D20 90% H2O/10% D2O collection VNMR 5.3 Franz Herrmann data analysis NDEE Brunger refinement X-PLOR 3.851 600 Varian INOVA ACE 12 n 1 ACE 12 A GLU 13 n 2 GLU 13 A PRO 14 n 3 PRO 14 A TYR 15 n 4 TYR 15 A ASN 16 n 5 ASN 16 A GLU 17 n 6 GLU 17 A TRP 18 n 7 TRP 18 A THR 19 n 8 THR 19 A LEU 20 n 9 LEU 20 A GLU 21 n 10 GLU 21 A LEU 22 n 11 LEU 22 A LEU 23 n 12 LEU 23 A GLU 24 n 13 GLU 24 A GLU 25 n 14 GLU 25 A LEU 26 n 15 LEU 26 A LYS 27 n 16 LYS 27 A SER 28 n 17 SER 28 A GLU 29 n 18 GLU 29 A ALA 30 n 19 ALA 30 A VAL 31 n 20 VAL 31 A ARG 32 n 21 ARG 32 A HIS 33 n 22 HIS 33 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A O H LYS VAL 27 31 1.54 2 A A O H LYS VAL 27 31 1.57 3 A A O H LYS VAL 27 31 1.58 4 A A O H LYS VAL 27 31 1.59 4 A A O H LEU LEU 23 26 1.60 5 A A O H LYS VAL 27 31 1.55 5 A A O H GLU HIS 29 33 1.56 6 A A O H LYS VAL 27 31 1.50 7 A A O H TRP LEU 18 22 1.59 9 A A O H LYS VAL 27 31 1.49 10 A A O H LYS VAL 27 31 1.52 11 A A O H TYR TRP 15 18 1.49 11 A A O H LYS VAL 27 31 1.52 12 A A O H LYS VAL 27 31 1.56 13 A A O H LYS VAL 27 31 1.58 14 A A O H LYS VAL 27 31 1.50 15 A A O H LYS VAL 27 31 1.50 16 A A O H LYS VAL 27 31 1.48 17 A A O H LYS VAL 27 31 1.49 18 A A O H LYS VAL 27 31 1.53 18 A A O H ASN LEU 16 20 1.60 19 A A O H LYS VAL 27 31 1.50 20 A A O H LYS VAL 27 31 1.55 21 A A O H LYS VAL 27 31 1.53 2 A ARG 32 0.138 SIDE CHAIN 3 A ARG 32 0.285 SIDE CHAIN 4 A ARG 32 0.270 SIDE CHAIN 5 A ARG 32 0.184 SIDE CHAIN 6 A ARG 32 0.291 SIDE CHAIN 7 A ARG 32 0.301 SIDE CHAIN 8 A ARG 32 0.316 SIDE CHAIN 9 A ARG 32 0.193 SIDE CHAIN 10 A ARG 32 0.303 SIDE CHAIN 12 A ARG 32 0.266 SIDE CHAIN 13 A ARG 32 0.216 SIDE CHAIN 14 A ARG 32 0.216 SIDE CHAIN 15 A ARG 32 0.293 SIDE CHAIN 16 A ARG 32 0.188 SIDE CHAIN 17 A ARG 32 0.317 SIDE CHAIN 18 A ARG 32 0.204 SIDE CHAIN 19 A ARG 32 0.315 SIDE CHAIN 20 A ARG 32 0.153 SIDE CHAIN 21 A ARG 32 0.268 SIDE CHAIN 22 A ARG 32 0.194 SIDE CHAIN 3 A ASN 16 44.86 82.40 8 A GLU 17 59.43 18.67 11 A ASN 16 41.95 -87.12 17 A ASN 16 38.53 71.88 17 A GLU 17 58.38 19.55 22 A ASN 16 -22.16 -53.67 SOLUTION STRUCTURE OF HIV-1 VPR (13-33) PEPTIDE IN MICELLS 1 N N A GLU 13 A GLU 2 HELX_P A HIS 33 A HIS 22 1 1 21 covale 1.305 both A ACE 12 A C ACE 1 1_555 A GLU 13 A N GLU 2 1_555 VIRAL PROTEIN helix, Viral protein VPR_HV1RH UNP 1 13 P05954 EPYNEWTLELLEELKSEAVRH 13 33 1FI0 13 33 P05954 A 1 2 22 BINDING SITE FOR RESIDUE ACE A 12 A ACE 12 Software 1 A PRO 14 A PRO 3 1 1_555 1 P 1