0.016181 0.009342 0.000000 0.000000 0.018684 0.000000 0.000000 0.000000 0.018727 0.00000 0.00000 0.00000 Suzuki, M. Sugimoto, H. Nakagawa, A. Tanaka, I. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 61.800 61.800 53.400 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Nat.Struct.Biol. NSBIEW 2024 1072-8368 3 259 266 10.1038/nsb0396-259 8605628 Crystal structure of the macrophage migration inhibitory factor from rat liver. 1996 US J.Struct.Biol. JSBIEM 0803 1047-8477 115 331 Crystallization of Rat Liver Macrophage Migration Inhibitory Factor for MAD Analysis 1995 10.2210/pdb1fim/pdb pdb_00001fim 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 283 1 1995-05-18 x-ray 1 1.0 SELENOMETHIONYL PROTEIN (MET 47) 12282.658 MACROPHAGE MIGRATION INHIBITORY FACTOR M2A, M101A 1 man polymer no yes PAFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQL(MSE)TFSGTSDPCALCSLHSIGKIGGAQNRNYS KLLCGLLSDRLHISPDRVYINYYDANAANVGWNGSTFA PAFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCALCSLHSIGKIGGAQNRNYSKLLC GLLSDRLHISPDRVYINYYDANAANVGWNGSTFA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus Escherichia sample METHIONINE AUXOTROPIC ESCHERICHIA COLI STRAINS HARVESTED IN A MEDIUM CONTAINING SELENOMETHIONINE 10116 LIVER Rattus norvegicus 562 Escherichia coli PET3 1 2.40 48.65 6.5 pH 6.5 pdbx_database_status struct_conf struct_conf_type database_2 struct_conn struct_ref_seq_dif struct_ref_seq_dif repository Initial release Version format compliance Version format compliance Derived calculations Other Database references Derived calculations Database references 1 0 1996-07-11 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 1 4 2021-11-03 1 5 2022-12-21 _pdbx_database_status.process_site _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq_dif.details _struct_ref_seq_dif.details Y BNL 1996-01-31 REL PRO 1 n 1 PRO 1 A ALA 2 n 2 ALA 2 A PHE 3 n 3 PHE 3 A ILE 4 n 4 ILE 4 A VAL 5 n 5 VAL 5 A ASN 6 n 6 ASN 6 A THR 7 n 7 THR 7 A ASN 8 n 8 ASN 8 A VAL 9 n 9 VAL 9 A PRO 10 n 10 PRO 10 A ARG 11 n 11 ARG 11 A ALA 12 n 12 ALA 12 A SER 13 n 13 SER 13 A VAL 14 n 14 VAL 14 A PRO 15 n 15 PRO 15 A GLU 16 n 16 GLU 16 A GLY 17 n 17 GLY 17 A PHE 18 n 18 PHE 18 A LEU 19 n 19 LEU 19 A SER 20 n 20 SER 20 A GLU 21 n 21 GLU 21 A LEU 22 n 22 LEU 22 A THR 23 n 23 THR 23 A GLN 24 n 24 GLN 24 A GLN 25 n 25 GLN 25 A LEU 26 n 26 LEU 26 A ALA 27 n 27 ALA 27 A GLN 28 n 28 GLN 28 A ALA 29 n 29 ALA 29 A THR 30 n 30 THR 30 A GLY 31 n 31 GLY 31 A LYS 32 n 32 LYS 32 A PRO 33 n 33 PRO 33 A ALA 34 n 34 ALA 34 A GLN 35 n 35 GLN 35 A TYR 36 n 36 TYR 36 A ILE 37 n 37 ILE 37 A ALA 38 n 38 ALA 38 A VAL 39 n 39 VAL 39 A HIS 40 n 40 HIS 40 A VAL 41 n 41 VAL 41 A VAL 42 n 42 VAL 42 A PRO 43 n 43 PRO 43 A ASP 44 n 44 ASP 44 A GLN 45 n 45 GLN 45 A LEU 46 n 46 LEU 46 A MSE 47 n 47 MSE 47 A THR 48 n 48 THR 48 A PHE 49 n 49 PHE 49 A SER 50 n 50 SER 50 A GLY 51 n 51 GLY 51 A THR 52 n 52 THR 52 A SER 53 n 53 SER 53 A ASP 54 n 54 ASP 54 A PRO 55 n 55 PRO 55 A CYS 56 n 56 CYS 56 A ALA 57 n 57 ALA 57 A LEU 58 n 58 LEU 58 A CYS 59 n 59 CYS 59 A SER 60 n 60 SER 60 A LEU 61 n 61 LEU 61 A HIS 62 n 62 HIS 62 A SER 63 n 63 SER 63 A ILE 64 n 64 ILE 64 A GLY 65 n 65 GLY 65 A LYS 66 n 66 LYS 66 A ILE 67 n 67 ILE 67 A GLY 68 n 68 GLY 68 A GLY 69 n 69 GLY 69 A ALA 70 n 70 ALA 70 A GLN 71 n 71 GLN 71 A ASN 72 n 72 ASN 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A TYR 75 n 75 TYR 75 A SER 76 n 76 SER 76 A LYS 77 n 77 LYS 77 A LEU 78 n 78 LEU 78 A LEU 79 n 79 LEU 79 A CYS 80 n 80 CYS 80 A GLY 81 n 81 GLY 81 A LEU 82 n 82 LEU 82 A LEU 83 n 83 LEU 83 A SER 84 n 84 SER 84 A ASP 85 n 85 ASP 85 A ARG 86 n 86 ARG 86 A LEU 87 n 87 LEU 87 A HIS 88 n 88 HIS 88 A ILE 89 n 89 ILE 89 A SER 90 n 90 SER 90 A PRO 91 n 91 PRO 91 A ASP 92 n 92 ASP 92 A ARG 93 n 93 ARG 93 A VAL 94 n 94 VAL 94 A TYR 95 n 95 TYR 95 A ILE 96 n 96 ILE 96 A ASN 97 n 97 ASN 97 A TYR 98 n 98 TYR 98 A TYR 99 n 99 TYR 99 A ASP 100 n 100 ASP 100 A ALA 101 n 101 ALA 101 A ASN 102 n 102 ASN 102 A ALA 103 n 103 ALA 103 A n 104 104 A n 105 105 A n 106 106 A n 107 107 A n 108 108 A n 109 109 A n 110 110 A n 111 111 A n 112 112 A n 113 113 A n 114 114 A author_defined_assembly 3 trimeric A MSE 47 SELENOMETHIONINE A MSE 47 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_665 -x+y+1,-x+1,z crystal symmetry operation 30.9000000000 53.5203699539 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -y+1,x-y,z crystal symmetry operation 61.8000000000 0.0000000000 0.0000000000 1 A ALA 104 A ALA 104 1 Y 1 A ASN 105 A ASN 105 1 Y 1 A VAL 106 A VAL 106 1 Y 1 A GLY 107 A GLY 107 1 Y 1 A TRP 108 A TRP 108 1 Y 1 A ASN 109 A ASN 109 1 Y 1 A GLY 110 A GLY 110 1 Y 1 A SER 111 A SER 111 1 Y 1 A THR 112 A THR 112 1 Y 1 A PHE 113 A PHE 113 1 Y 1 A ALA 114 A ALA 114 1 Y 1 -3.22 0.50 120.30 117.08 A A A NE CZ NH2 ARG ARG ARG 93 93 93 N 1 A ALA 101 -38.93 -19.28 30.7 0.2440000 0.1970000 0.1970000 2.2 5.0 5143 3.59 94.6 1 0. 0.28 2.2 5.0 0 782 0 0 782 0.015 1.718 25.88 1.602 2.2 40.0 1FIM 5697 0. 1 94.5 model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 MACROPHAGE MIGRATION INHIBITORY FACTOR 1 N N A GLY 17 A GLY 17 HELX_P A GLY 31 A GLY 31 1 H1 15 A GLY 68 A GLY 68 HELX_P A HIS 88 A HIS 88 1 H2 21 A PRO 10 A PRO 10 HELX_P A VAL 14 A VAL 14 5 H3 5 A PRO 33 A PRO 33 HELX_P A ILE 37 A ILE 37 5 H4 5 covale 1.325 both A LEU 46 A C LEU 46 1_555 A MSE 47 A N MSE 47 1_555 covale 1.337 both A MSE 47 A C MSE 47 1_555 A THR 48 A N THR 48 1_555 CYTOKINE MACROPHAGE, INFLAMMATORY RESPONSE, CYTOKINE MIF_RAT UNP 1 1 P30904 PMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTSDPCALCSLHSIGKIGGAQNRNYSKLLC GLLSDRLHISPDRVYINYYDMNAANVGWNGSTFA 1 114 1FIM 1 114 P30904 A 1 1 114 1 MET engineered mutation ALA 2 1FIM A P30904 UNP 2 2 1 MET engineered mutation MSE 47 1FIM A P30904 UNP 47 47 1 MET engineered mutation ALA 101 1FIM A P30904 UNP 101 101 4 parallel anti-parallel parallel A ALA 38 A ALA 38 A VAL 42 A VAL 42 A PRO 1 A PRO 1 A THR 7 A THR 7 A CYS 56 A CYS 56 A SER 63 A SER 63 A ARG 93 A ARG 93 A ALA 101 A ALA 101 173 P 63