0.017931 0.000000 0.000000 0.000000 0.013897 0.000000 0.000000 0.000000 0.012464 0.00000 0.00000 0.00000 Adler, M. Whitlow, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90. 90. 90. 55.77 71.96 80.23 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Ca 2 40.078 CALCIUM ION non-polymer Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking C25 H24 F2 N6 O5 526.492 N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL)PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CA N 75 N CL N 76 N N N 77 R C N 78 N C N 79 N O N 80 N C N 81 N S N 82 N O N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N C N 97 N O N 98 N N N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N N N 111 S C N 112 N C N 113 N O N 114 N C N 115 N C N 116 N C N 117 N O N 118 N O N 119 N O N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 N C N 131 N C N 132 N O N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N C N 140 N O N 141 N C N 142 N O N 143 N C N 144 N O N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N N N 154 S C N 155 N C N 156 N O N 157 N C Y 158 N C Y 159 N N Y 160 N C Y 161 N C Y 162 N N N 163 N O N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N O N 175 N H N 176 N H N 177 N N N 178 S C N 179 N C N 180 N O N 181 S C N 182 N C N 183 N C N 184 N C N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 N C N 204 N C N 205 N C N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 N C N 226 N C N 227 N C N 228 N C N 229 N N N 230 N O N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 N C N 251 N C N 252 N S N 253 N C N 254 N O N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 N C Y 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N N N 290 S C N 291 N C N 292 N O N 293 N C N 294 N C N 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N N N 307 S C N 308 N C N 309 N O N 310 N C N 311 N O N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 R C N 325 N O N 326 N C N 327 N O N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N N Y 346 N C Y 347 N C Y 348 N C Y 349 N C Y 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N N N 365 S C N 366 N C N 367 N O N 368 N C Y 369 N C Y 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C N 375 N O N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 N C N 393 N C N 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H Y 407 N C N 408 N F Y 409 N C Y 410 N C N 411 N F Y 412 N C Y 413 N N Y 414 N C N 415 N O N 416 N O Y 417 N C Y 418 N C Y 419 N C Y 420 N C Y 421 N C Y 422 N C N 423 N C N 424 N N N 425 N N N 426 N O Y 427 N C Y 428 N C Y 429 N C Y 430 N C Y 431 N C Y 432 N C N 433 N C N 434 N N N 435 N C N 436 N N N 437 N C N 438 N C N 439 N N N 440 N C N 441 N C N 442 N O N 443 N O N 444 N C N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N doub Y 262 N sing Y 263 N sing N 264 N sing Y 265 N doub N 266 N sing Y 267 N doub N 268 N sing Y 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub Y 335 N sing Y 336 N sing N 337 N sing Y 338 N sing Y 339 N doub N 340 N sing Y 341 N doub N 342 N sing Y 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing Y 390 N doub Y 391 N sing Y 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing N 397 N sing Y 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing Y 403 N doub Y 404 N sing Y 405 N sing N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing Y 411 N doub N 412 N sing N 413 E doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing Y 419 N doub Y 420 N sing Y 421 N sing N 422 N sing Y 423 N doub N 424 N sing Y 425 N sing N 426 N sing Y 427 N doub N 428 N sing N 429 N sing N 430 N sing N 431 N doub N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N doub N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing US Biochemistry BICHAW 0033 0006-2960 39 12534 12542 10.1021/bi001477q 11027132 Preparation, characterization, and the crystal structure of the inhibitor ZK-807834 (CI-1031) complexed with factor Xa. 2000 US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 95 6630 6635 10.1073/pnas.95.12.6630 Structural basis for chemical inhibition of human blood coagulation factor Xa 1998 US J.Biol.Chem. JBCHA3 0071 0021-9258 271 29988 29992 10.1074/jbc.271.47.29988 X-ray structure of active site-inhibited clotting factor Xa. Implications for drug design and substrate recognition 1996 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 55 1395 1404 10.1107/S0907444999007350 Crystallographic analysis of potent and selective factor Xa inhibitors complexed to bovine trypsin 1999 US J.Med.Chem. JMCMAR 0151 0022-2623 41 3557 3562 10.1021/jm980280h Discovery of N-[2-[5-[Amino(imino)methyl]-2-hydroxyphenoxy]-3, 5-difluoro-6-[3-(4, 5-dihydro-1-methyl-1H-imidazol-2-yl)phenoxy]pyridin-4-yl]-N-methylgl y cine (ZK-807834): a potent, selective, and orally active inhibitor of the blood coagulation enzyme factor Xa 1998 US J.Med.Chem. JMCMAR 0151 0022-2623 42 1749 1756 10.1021/jm980667k Design, synthesis, and activity of 2,6-diphenoxypyridine-derived factor Xa inhibitors 1999 10.2210/pdb1fjs/pdb pdb_00001fjs 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 1999-11-19 ADSC QUANTUM 4 SI(111) SINGLE WAVELENGTH M x-ray 1 1.033 1.0 BL9-2 SSRL 1.033 SYNCHROTRON SSRL BEAMLINE BL9-2 26447.104 COAGULATION FACTOR XA 3.4.21.6 HEAVY CHAIN, CATALYTIC DOMAIN 1 nat polymer 5589.234 COAGULATION FACTOR XA 3.4.21.6 LIGHT CHAIN, EPIDERMAL GROWTH FACTOR LIKE DOMAIN 1 nat polymer Berlex Biosciences 40.078 CALCIUM ION SYNTHETIC FACTOR XA INHIBITOR 1 syn non-polymer 35.453 CHLORIDE ION 1 syn non-polymer 526.492 N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL)PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE 1 syn non-polymer 92.094 GLYCEROL 6 syn non-polymer 18.015 water 163 nat water SYNTHETIC FACTOR XA INHIBITOR no no IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKT A polypeptide(L) no no KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLE L polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human EXTRACTED FROM BLOOD Homo sample 9606 Homo sapiens human EXTRACTED FROM BLOOD Homo sample 9606 Homo sapiens 1 2.51 51.03 1XKA STRUCTURE WAS SUPERIMPOSED ON 1FAX THEN USED FOR DIRECT REPLACEMENT VAPOR DIFFUSION 8 Drop; 2 microliter, 12 mg/ml Factor Xa, 50 mM Tris pH 8.0, 75 mM NaCl + 2 microlter reservoir: Reservoir; 15-21% PEG-1500 and 10mM CaCl2, VAPOR DIFFUSION, temperature 295K 295 pdbx_unobs_or_zero_occ_atoms software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_struct_conn_angle pdbx_unobs_or_zero_occ_atoms struct_conn struct_site entity pdbx_entity_src_syn repository Initial release Version format compliance Non-polymer description Version format compliance Advisory Refinement description Advisory Data collection Database references Derived calculations Refinement description Source and taxonomy Structure summary 1 0 2000-10-04 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 1 4 2023-08-09 1 5 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _entity.details Factor Xa complexed to DX-9065a Factor Xa complexed to FX-2212a Trypsin complexed to ZK806688 Trypsin complexed to ZK806974 Factor Xa complexed to FX-2212a des GLA Factor Xa RCSB Y RCSB 2000-08-08 REL REL CA CALCIUM ION CL CHLORIDE ION Z34 N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL)PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE GOL GLYCEROL HOH water 1XKA PDB experimental model CA 507 3 CA CA 507 A CL 508 4 CL CL 508 A Z34 500 5 Z34 Z34 500 A GOL 502 6 GOL GOL 502 A GOL 503 6 GOL GOL 503 A GOL 504 6 GOL GOL 504 A GOL 505 6 GOL GOL 505 A GOL 506 6 GOL GOL 506 A GOL 501 6 GOL GOL 501 L HOH 600 7 HOH HOH 600 A HOH 601 7 HOH HOH 601 A HOH 602 7 HOH HOH 602 A HOH 603 7 HOH HOH 603 A HOH 604 7 HOH HOH 604 A HOH 605 7 HOH HOH 605 A HOH 606 7 HOH HOH 606 A HOH 607 7 HOH HOH 607 A HOH 608 7 HOH HOH 608 A HOH 609 7 HOH HOH 609 A HOH 610 7 HOH HOH 610 A HOH 611 7 HOH HOH 611 A HOH 612 7 HOH HOH 612 A HOH 613 7 HOH HOH 613 A HOH 614 7 HOH HOH 614 A HOH 615 7 HOH HOH 615 A HOH 616 7 HOH HOH 616 A HOH 620 7 HOH HOH 620 A HOH 621 7 HOH HOH 621 A HOH 622 7 HOH HOH 622 A HOH 623 7 HOH HOH 623 A HOH 624 7 HOH HOH 624 A HOH 625 7 HOH HOH 625 A HOH 626 7 HOH HOH 626 A HOH 627 7 HOH HOH 627 A HOH 628 7 HOH HOH 628 A HOH 629 7 HOH HOH 629 A HOH 630 7 HOH HOH 630 A HOH 631 7 HOH HOH 631 A HOH 632 7 HOH HOH 632 A HOH 633 7 HOH HOH 633 A HOH 634 7 HOH HOH 634 A HOH 635 7 HOH HOH 635 A HOH 636 7 HOH HOH 636 A HOH 637 7 HOH HOH 637 A HOH 638 7 HOH HOH 638 A HOH 639 7 HOH HOH 639 A HOH 640 7 HOH HOH 640 A HOH 641 7 HOH HOH 641 A HOH 647 7 HOH HOH 647 A HOH 649 7 HOH HOH 649 A HOH 650 7 HOH HOH 650 A HOH 651 7 HOH HOH 651 A HOH 652 7 HOH HOH 652 A HOH 653 7 HOH HOH 653 A HOH 654 7 HOH HOH 654 A HOH 655 7 HOH HOH 655 A HOH 656 7 HOH HOH 656 A HOH 657 7 HOH HOH 657 A HOH 658 7 HOH HOH 658 A HOH 659 7 HOH HOH 659 A HOH 660 7 HOH HOH 660 A HOH 661 7 HOH HOH 661 A HOH 662 7 HOH HOH 662 A HOH 663 7 HOH HOH 663 A HOH 664 7 HOH HOH 664 A HOH 665 7 HOH HOH 665 A HOH 666 7 HOH HOH 666 A HOH 667 7 HOH HOH 667 A HOH 668 7 HOH HOH 668 A HOH 669 7 HOH HOH 669 A HOH 670 7 HOH HOH 670 A HOH 671 7 HOH HOH 671 A HOH 672 7 HOH HOH 672 A HOH 674 7 HOH HOH 674 A HOH 675 7 HOH HOH 675 A HOH 676 7 HOH HOH 676 A HOH 678 7 HOH HOH 678 A HOH 680 7 HOH HOH 680 A HOH 681 7 HOH HOH 681 A HOH 682 7 HOH HOH 682 A HOH 684 7 HOH HOH 684 A HOH 685 7 HOH HOH 685 A HOH 686 7 HOH HOH 686 A HOH 688 7 HOH HOH 688 A HOH 691 7 HOH HOH 691 A HOH 692 7 HOH HOH 692 A HOH 694 7 HOH HOH 694 A HOH 697 7 HOH HOH 697 A HOH 698 7 HOH HOH 698 A HOH 700 7 HOH HOH 700 A HOH 701 7 HOH HOH 701 A HOH 702 7 HOH HOH 702 A HOH 703 7 HOH HOH 703 A HOH 704 7 HOH HOH 704 A HOH 707 7 HOH HOH 707 A HOH 708 7 HOH HOH 708 A HOH 712 7 HOH HOH 712 A HOH 713 7 HOH HOH 713 A HOH 714 7 HOH HOH 714 A HOH 715 7 HOH HOH 715 A HOH 716 7 HOH HOH 716 A HOH 717 7 HOH HOH 717 A HOH 720 7 HOH HOH 720 A HOH 721 7 HOH HOH 721 A HOH 723 7 HOH HOH 723 A HOH 724 7 HOH HOH 724 A HOH 725 7 HOH HOH 725 A HOH 726 7 HOH HOH 726 A HOH 727 7 HOH HOH 727 A HOH 728 7 HOH HOH 728 A HOH 729 7 HOH HOH 729 A HOH 730 7 HOH HOH 730 A HOH 731 7 HOH HOH 731 A HOH 732 7 HOH HOH 732 A HOH 734 7 HOH HOH 734 A HOH 735 7 HOH HOH 735 A HOH 736 7 HOH HOH 736 A HOH 737 7 HOH HOH 737 A HOH 738 7 HOH HOH 738 A HOH 740 7 HOH HOH 740 A HOH 741 7 HOH HOH 741 A HOH 742 7 HOH HOH 742 A HOH 743 7 HOH HOH 743 A HOH 744 7 HOH HOH 744 A HOH 745 7 HOH HOH 745 A HOH 746 7 HOH HOH 746 A HOH 747 7 HOH HOH 747 A HOH 748 7 HOH HOH 748 A HOH 749 7 HOH HOH 749 A HOH 750 7 HOH HOH 750 A HOH 751 7 HOH HOH 751 A HOH 753 7 HOH HOH 753 A HOH 754 7 HOH HOH 754 A HOH 755 7 HOH HOH 755 A HOH 756 7 HOH HOH 756 A HOH 757 7 HOH HOH 757 A HOH 758 7 HOH HOH 758 A HOH 759 7 HOH HOH 759 A HOH 761 7 HOH HOH 761 A HOH 762 7 HOH HOH 762 A HOH 617 7 HOH HOH 617 L HOH 618 7 HOH HOH 618 L HOH 619 7 HOH HOH 619 L HOH 642 7 HOH HOH 642 L HOH 643 7 HOH HOH 643 L HOH 644 7 HOH HOH 644 L HOH 645 7 HOH HOH 645 L HOH 646 7 HOH HOH 646 L HOH 648 7 HOH HOH 648 L HOH 673 7 HOH HOH 673 L HOH 677 7 HOH HOH 677 L HOH 679 7 HOH HOH 679 L HOH 683 7 HOH HOH 683 L HOH 687 7 HOH HOH 687 L HOH 689 7 HOH HOH 689 L HOH 690 7 HOH HOH 690 L HOH 693 7 HOH HOH 693 L HOH 695 7 HOH HOH 695 L HOH 696 7 HOH HOH 696 L HOH 699 7 HOH HOH 699 L HOH 705 7 HOH HOH 705 L HOH 706 7 HOH HOH 706 L HOH 709 7 HOH HOH 709 L HOH 710 7 HOH HOH 710 L HOH 711 7 HOH HOH 711 L HOH 718 7 HOH HOH 718 L HOH 719 7 HOH HOH 719 L HOH 722 7 HOH HOH 722 L HOH 733 7 HOH HOH 733 L HOH 739 7 HOH HOH 739 L HOH 752 7 HOH HOH 752 L HOH 760 7 HOH HOH 760 L ILE 16 n 1 ILE 16 A VAL 17 n 2 VAL 17 A GLY 18 n 3 GLY 18 A GLY 19 n 4 GLY 19 A GLN 20 n 5 GLN 20 A GLU 21 n 6 GLU 21 A CYS 22 n 7 CYS 22 A LYS 23 n 8 LYS 23 A ASP 24 n 9 ASP 24 A GLY 25 n 10 GLY 25 A GLU 26 n 11 GLU 26 A CYS 27 n 12 CYS 27 A PRO 28 n 13 PRO 28 A TRP 29 n 14 TRP 29 A GLN 30 n 15 GLN 30 A ALA 31 n 16 ALA 31 A LEU 32 n 17 LEU 32 A LEU 33 n 18 LEU 33 A ILE 34 n 19 ILE 34 A ASN 35 n 20 ASN 35 A GLU 36 n 21 GLU 36 A GLU 37 n 22 GLU 37 A ASN 38 n 23 ASN 38 A GLU 39 n 24 GLU 39 A GLY 40 n 25 GLY 40 A PHE 41 n 26 PHE 41 A CYS 42 n 27 CYS 42 A GLY 43 n 28 GLY 43 A GLY 44 n 29 GLY 44 A THR 45 n 30 THR 45 A ILE 46 n 31 ILE 46 A LEU 47 n 32 LEU 47 A SER 48 n 33 SER 48 A GLU 49 n 34 GLU 49 A PHE 50 n 35 PHE 50 A TYR 51 n 36 TYR 51 A ILE 52 n 37 ILE 52 A LEU 53 n 38 LEU 53 A THR 54 n 39 THR 54 A ALA 55 n 40 ALA 55 A ALA 56 n 41 ALA 56 A HIS 57 n 42 HIS 57 A CYS 58 n 43 CYS 58 A LEU 59 n 44 LEU 59 A TYR 60 n 45 TYR 60 A GLN 61 n 46 GLN 61 A ALA 61 n 47 A ALA 61 A LYS 62 n 48 LYS 62 A ARG 63 n 49 ARG 63 A PHE 64 n 50 PHE 64 A LYS 65 n 51 LYS 65 A VAL 66 n 52 VAL 66 A ARG 67 n 53 ARG 67 A VAL 68 n 54 VAL 68 A GLY 69 n 55 GLY 69 A ASP 70 n 56 ASP 70 A ARG 71 n 57 ARG 71 A ASN 72 n 58 ASN 72 A THR 73 n 59 THR 73 A GLU 74 n 60 GLU 74 A GLN 75 n 61 GLN 75 A GLU 76 n 62 GLU 76 A GLU 77 n 63 GLU 77 A GLY 78 n 64 GLY 78 A GLY 79 n 65 GLY 79 A GLU 80 n 66 GLU 80 A ALA 81 n 67 ALA 81 A VAL 82 n 68 VAL 82 A HIS 83 n 69 HIS 83 A GLU 84 n 70 GLU 84 A VAL 85 n 71 VAL 85 A GLU 86 n 72 GLU 86 A VAL 87 n 73 VAL 87 A VAL 88 n 74 VAL 88 A ILE 89 n 75 ILE 89 A LYS 90 n 76 LYS 90 A HIS 91 n 77 HIS 91 A ASN 92 n 78 ASN 92 A ARG 93 n 79 ARG 93 A PHE 94 n 80 PHE 94 A THR 95 n 81 THR 95 A LYS 96 n 82 LYS 96 A GLU 97 n 83 GLU 97 A THR 98 n 84 THR 98 A TYR 99 n 85 TYR 99 A ASP 100 n 86 ASP 100 A PHE 101 n 87 PHE 101 A ASP 102 n 88 ASP 102 A ILE 103 n 89 ILE 103 A ALA 104 n 90 ALA 104 A VAL 105 n 91 VAL 105 A LEU 106 n 92 LEU 106 A ARG 107 n 93 ARG 107 A LEU 108 n 94 LEU 108 A LYS 109 n 95 LYS 109 A THR 110 n 96 THR 110 A PRO 111 n 97 PRO 111 A ILE 112 n 98 ILE 112 A THR 113 n 99 THR 113 A PHE 114 n 100 PHE 114 A ARG 115 n 101 ARG 115 A MET 116 n 102 MET 116 A ASN 117 n 103 ASN 117 A VAL 118 n 104 VAL 118 A ALA 119 n 105 ALA 119 A PRO 120 n 106 PRO 120 A ALA 121 n 107 ALA 121 A CYS 122 n 108 CYS 122 A LEU 123 n 109 LEU 123 A PRO 124 n 110 PRO 124 A GLU 124 n 111 A GLU 124 A ARG 125 n 112 ARG 125 A ASP 126 n 113 ASP 126 A TRP 127 n 114 TRP 127 A ALA 128 n 115 ALA 128 A GLU 129 n 116 GLU 129 A SER 130 n 117 SER 130 A THR 131 n 118 THR 131 A LEU 131 n 119 A LEU 131 A MET 131 n 120 B MET 131 A THR 132 n 121 THR 132 A GLN 133 n 122 GLN 133 A LYS 134 n 123 LYS 134 A THR 135 n 124 THR 135 A GLY 136 n 125 GLY 136 A ILE 137 n 126 ILE 137 A VAL 138 n 127 VAL 138 A SER 139 n 128 SER 139 A GLY 140 n 129 GLY 140 A PHE 141 n 130 PHE 141 A GLY 142 n 131 GLY 142 A ARG 143 n 132 ARG 143 A THR 144 n 133 THR 144 A HIS 145 n 134 HIS 145 A GLU 146 n 135 GLU 146 A LYS 147 n 136 LYS 147 A GLY 149 n 137 GLY 149 A ARG 150 n 138 ARG 150 A GLN 151 n 139 GLN 151 A SER 152 n 140 SER 152 A THR 153 n 141 THR 153 A ARG 154 n 142 ARG 154 A LEU 155 n 143 LEU 155 A LYS 156 n 144 LYS 156 A MET 157 n 145 MET 157 A LEU 158 n 146 LEU 158 A GLU 159 n 147 GLU 159 A VAL 160 n 148 VAL 160 A PRO 161 n 149 PRO 161 A TYR 162 n 150 TYR 162 A VAL 163 n 151 VAL 163 A ASP 164 n 152 ASP 164 A ARG 165 n 153 ARG 165 A ASN 166 n 154 ASN 166 A SER 167 n 155 SER 167 A CYS 168 n 156 CYS 168 A LYS 169 n 157 LYS 169 A LEU 170 n 158 LEU 170 A SER 171 n 159 SER 171 A SER 172 n 160 SER 172 A SER 173 n 161 SER 173 A PHE 174 n 162 PHE 174 A ILE 175 n 163 ILE 175 A ILE 176 n 164 ILE 176 A THR 177 n 165 THR 177 A GLN 178 n 166 GLN 178 A ASN 179 n 167 ASN 179 A MET 180 n 168 MET 180 A PHE 181 n 169 PHE 181 A CYS 182 n 170 CYS 182 A ALA 183 n 171 ALA 183 A GLY 184 n 172 GLY 184 A TYR 185 n 173 TYR 185 A ASP 185 n 174 A ASP 185 A THR 185 n 175 B THR 185 A LYS 186 n 176 LYS 186 A GLN 187 n 177 GLN 187 A GLU 188 n 178 GLU 188 A ASP 189 n 179 ASP 189 A ALA 190 n 180 ALA 190 A CYS 191 n 181 CYS 191 A GLN 192 n 182 GLN 192 A GLY 193 n 183 GLY 193 A ASP 194 n 184 ASP 194 A SER 195 n 185 SER 195 A GLY 196 n 186 GLY 196 A GLY 197 n 187 GLY 197 A PRO 198 n 188 PRO 198 A HIS 199 n 189 HIS 199 A VAL 200 n 190 VAL 200 A THR 201 n 191 THR 201 A ARG 202 n 192 ARG 202 A PHE 203 n 193 PHE 203 A LYS 204 n 194 LYS 204 A ASP 205 n 195 ASP 205 A THR 206 n 196 THR 206 A TYR 207 n 197 TYR 207 A PHE 208 n 198 PHE 208 A VAL 209 n 199 VAL 209 A THR 210 n 200 THR 210 A GLY 211 n 201 GLY 211 A ILE 212 n 202 ILE 212 A VAL 213 n 203 VAL 213 A SER 214 n 204 SER 214 A TRP 215 n 205 TRP 215 A GLY 216 n 206 GLY 216 A GLU 217 n 207 GLU 217 A GLY 218 n 208 GLY 218 A CYS 220 n 209 CYS 220 A ALA 221 n 210 ALA 221 A ARG 222 n 211 ARG 222 A LYS 223 n 212 LYS 223 A GLY 223 n 213 A GLY 223 A LYS 224 n 214 LYS 224 A TYR 225 n 215 TYR 225 A GLY 226 n 216 GLY 226 A ILE 227 n 217 ILE 227 A TYR 228 n 218 TYR 228 A THR 229 n 219 THR 229 A LYS 230 n 220 LYS 230 A VAL 231 n 221 VAL 231 A THR 232 n 222 THR 232 A ALA 233 n 223 ALA 233 A PHE 234 n 224 PHE 234 A LEU 235 n 225 LEU 235 A LYS 236 n 226 LYS 236 A TRP 237 n 227 TRP 237 A ILE 238 n 228 ILE 238 A ASP 239 n 229 ASP 239 A ARG 240 n 230 ARG 240 A SER 241 n 231 SER 241 A MET 242 n 232 MET 242 A LYS 243 n 233 LYS 243 A THR 244 n 234 THR 244 A LYS 87 n 1 LYS 87 L LEU 88 n 2 LEU 88 L CYS 89 n 3 CYS 89 L SER 90 n 4 SER 90 L LEU 91 n 5 LEU 91 L ASP 92 n 6 ASP 92 L ASN 93 n 7 ASN 93 L GLY 94 n 8 GLY 94 L ASP 95 n 9 ASP 95 L CYS 96 n 10 CYS 96 L ASP 97 n 11 ASP 97 L GLN 98 n 12 GLN 98 L PHE 99 n 13 PHE 99 L CYS 100 n 14 CYS 100 L HIS 101 n 15 HIS 101 L GLU 102 n 16 GLU 102 L GLU 103 n 17 GLU 103 L GLN 104 n 18 GLN 104 L ASN 105 n 19 ASN 105 L SER 106 n 20 SER 106 L VAL 107 n 21 VAL 107 L VAL 108 n 22 VAL 108 L CYS 109 n 23 CYS 109 L SER 110 n 24 SER 110 L CYS 111 n 25 CYS 111 L ALA 112 n 26 ALA 112 L ARG 113 n 27 ARG 113 L GLY 114 n 28 GLY 114 L TYR 115 n 29 TYR 115 L THR 116 n 30 THR 116 L LEU 117 n 31 LEU 117 L ALA 118 n 32 ALA 118 L ASP 119 n 33 ASP 119 L ASN 120 n 34 ASN 120 L GLY 121 n 35 GLY 121 L LYS 122 n 36 LYS 122 L ALA 123 n 37 ALA 123 L CYS 124 n 38 CYS 124 L ILE 125 n 39 ILE 125 L PRO 126 n 40 PRO 126 L THR 127 n 41 THR 127 L GLY 128 n 42 GLY 128 L PRO 129 n 43 PRO 129 L TYR 130 n 44 TYR 130 L PRO 131 n 45 PRO 131 L CYS 132 n 46 CYS 132 L GLY 133 n 47 GLY 133 L LYS 134 n 48 LYS 134 L GLN 135 n 49 GLN 135 L THR 136 n 50 THR 136 L LEU 137 n 51 LEU 137 L GLU 138 n 52 GLU 138 L author_and_software_defined_assembly PISA 2 dimeric 4400 -37 12690 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 A ASN 72 A O ASN 58 1_555 88.4 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 A GLN 75 A O GLN 61 1_555 176.3 A ASN 72 A O ASN 58 1_555 A CA 507 C CA CA 1_555 A GLN 75 A O GLN 61 1_555 88.1 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 A GLU 77 A OE2 GLU 63 1_555 77.4 A ASN 72 A O ASN 58 1_555 A CA 507 C CA CA 1_555 A GLU 77 A OE2 GLU 63 1_555 82.8 A GLN 75 A O GLN 61 1_555 A CA 507 C CA CA 1_555 A GLU 77 A OE2 GLU 63 1_555 103.3 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 A GLU 80 A OE2 GLU 66 1_555 91.7 A ASN 72 A O ASN 58 1_555 A CA 507 C CA CA 1_555 A GLU 80 A OE2 GLU 66 1_555 160.2 A GLN 75 A O GLN 61 1_555 A CA 507 C CA CA 1_555 A GLU 80 A OE2 GLU 66 1_555 92.0 A GLU 77 A OE2 GLU 63 1_555 A CA 507 C CA CA 1_555 A GLU 80 A OE2 GLU 66 1_555 77.9 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 83.5 A ASN 72 A O ASN 58 1_555 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 91.3 A GLN 75 A O GLN 61 1_555 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 95.4 A GLU 77 A OE2 GLU 63 1_555 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 160.1 A GLU 80 A OE2 GLU 66 1_555 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 108.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 20 A O GLN 5 A N MET 157 A N MET 145 A N VAL 160 A N VAL 148 A O GLY 136 A O GLY 125 A N SER 139 A N SER 128 A O PRO 198 A O PRO 188 A N PHE 203 A N PHE 193 A O THR 206 A O THR 196 A O TRP 215 A O TRP 205 A N ILE 227 A N ILE 217 A N TYR 228 A N TYR 218 A O PHE 181 A O PHE 169 A O LEU 33 A O LEU 18 A N PHE 41 A N PHE 26 A O THR 45 A O THR 30 A N LEU 53 A N LEU 38 A N THR 54 A N THR 39 A O ALA 104 A O ALA 90 A O ARG 107 A O ARG 93 A N GLU 86 A N GLU 72 A O HIS 83 A O HIS 69 A N VAL 66 A N VAL 52 A N ARG 67 A N ARG 53 A O LEU 32 A O LEU 17 L N GLU 103 B N GLU 17 L O SER 106 B O SER 20 L O THR 116 B O THR 30 L N ILE 125 B N ILE 39 1 A CG LYS 62 A CG LYS 48 0 Y 1 A CD LYS 62 A CD LYS 48 0 Y 1 A CE LYS 62 A CE LYS 48 0 Y 1 A NZ LYS 62 A NZ LYS 48 0 Y 1 A CG ARG 150 A CG ARG 138 0 Y 1 A CD ARG 150 A CD ARG 138 0 Y 1 A NE ARG 150 A NE ARG 138 0 Y 1 A CZ ARG 150 A CZ ARG 138 0 Y 1 A NH1 ARG 150 A NH1 ARG 138 0 Y 1 A NH2 ARG 150 A NH2 ARG 138 0 Y 1 A CG LYS 223 A CG LYS 212 0 Y 1 A CD LYS 223 A CD LYS 212 0 Y 1 A CE LYS 223 A CE LYS 212 0 Y 1 A NZ LYS 223 A NZ LYS 212 0 Y 1 A GLU 74 -115.68 78.84 1 A GLN 75 157.11 146.56 1 A ARG 115 -171.45 -170.54 B 1 A THR 185 -78.74 -84.88 1 A LYS 186 -33.49 134.17 1 A SER 214 -108.99 -62.27 1 L LEU 88 55.02 -113.10 1 L GLN 98 -129.13 -109.00 1 L LYS 122 -131.90 -47.11 PARHCSDX.PRO,PARAM11.WAT TOPHCSDX.PRO 19.44 0.136 0.0 0.0 4.320 0.0 -4.457 Final refinement had a 400 to 300 degree simulated annealing, followed by a powell minimization, B factor optimization and a final powell minimization. 0.256 0.196 1.92 8.0 891 24059 22885 4.0 91.9 random 1 2 DIRECT REPLACEMENT 1XKA Engh and Huber 1.92 8.0 163 2475 76 0 2236 0.011 1.976 1.777 1.5 2.0 2.0 2.5 0.268 0.257 2.01 109 2323 8 4.5 79.5 51.6 1.82 26.1 1FJS 104166 29450 0.0 -3.0 0.0557 1 12.6 3.5 99.2 1.82 1.93 1.33 4727 0.379 1 3.1 97.1 data scaling X-GEN data reduction X-GEN model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 CRYSTAL STRUCTURE OF THE INHIBITOR ZK-807834 (CI-1031) COMPLEXED WITH FACTOR XA 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 6 N N 6 N N 6 N N 7 N N 7 N N A ASP 164 A ASP 152 HELX_P A SER 172 A SER 160 1 3 9 A PHE 234 A PHE 224 HELX_P A MET 242 A MET 232 1 4 9 A LYS 243 A LYS 233 HELX_P A THR 244 A THR 234 5 5 2 L LYS 87 B LYS 1 HELX_P L LEU 91 B LEU 5 5 6 5 L LEU 91 B LEU 5 HELX_P L CYS 96 B CYS 10 5 7 6 disulf 2.302 A CYS 22 A SG CYS 7 1_555 A CYS 27 A SG CYS 12 1_555 disulf 2.390 A CYS 42 A SG CYS 27 1_555 A CYS 58 A SG CYS 43 1_555 disulf 2.450 A CYS 122 A SG CYS 108 1_555 L CYS 132 B SG CYS 46 1_555 disulf 2.299 A CYS 168 A SG CYS 156 1_555 A CYS 182 A SG CYS 170 1_555 disulf 2.366 A CYS 191 A SG CYS 181 1_555 A CYS 220 A SG CYS 209 1_555 disulf 2.359 L CYS 89 B SG CYS 3 1_555 L CYS 100 B SG CYS 14 1_555 disulf 2.285 L CYS 96 B SG CYS 10 1_555 L CYS 109 B SG CYS 23 1_555 disulf 2.394 L CYS 111 B SG CYS 25 1_555 L CYS 124 B SG CYS 38 1_555 metalc 2.300 A ASP 70 A OD2 ASP 56 1_555 A CA 507 C CA CA 1_555 metalc 2.157 A ASN 72 A O ASN 58 1_555 A CA 507 C CA CA 1_555 metalc 2.445 A GLN 75 A O GLN 61 1_555 A CA 507 C CA CA 1_555 metalc 2.273 A GLU 77 A OE2 GLU 63 1_555 A CA 507 C CA CA 1_555 metalc 2.383 A GLU 80 A OE2 GLU 66 1_555 A CA 507 C CA CA 1_555 metalc 1.825 A CA 507 C CA CA 1_555 A HOH 612 L O HOH 1_555 BLOOD CLOTTING Protein Inhibitor Complex, Coagulation Cofactor, Protease, BLOOD CLOTTING FA10_HUMAN UNP 1 235 P00742 FA10_HUMAN UNP 2 127 P00742 235 468 1FJS 16 244 P00742 A 1 1 234 127 178 1FJS 87 138 P00742 L 2 1 52 7 7 2 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLN 20 A GLN 5 A GLU 21 A GLU 6 A LYS 156 A LYS 144 A PRO 161 A PRO 149 A THR 135 A THR 124 A GLY 140 A GLY 129 A PRO 198 A PRO 188 A PHE 203 A PHE 193 A THR 206 A THR 196 A TRP 215 A TRP 205 A GLY 226 A GLY 216 A LYS 230 A LYS 220 A MET 180 A MET 168 A ALA 183 A ALA 171 A GLN 30 A GLN 15 A ILE 34 A ILE 19 A GLY 40 A GLY 25 A ILE 46 A ILE 31 A TYR 51 A TYR 36 A THR 54 A THR 39 A ALA 104 A ALA 90 A LEU 108 A LEU 94 A ALA 81 A ALA 67 A LYS 90 A LYS 76 A LYS 65 A LYS 51 A VAL 68 A VAL 54 A GLN 30 A GLN 15 A ILE 34 A ILE 19 L PHE 99 B PHE 13 L GLU 103 B GLU 17 L SER 106 B SER 20 L SER 110 B SER 24 L TYR 115 B TYR 29 L LEU 117 B LEU 31 L CYS 124 B CYS 38 L PRO 126 B PRO 40 BINDING SITE FOR RESIDUE CA A 507 A CA 507 Software 6 BINDING SITE FOR RESIDUE CL A 508 A CL 508 Software 5 BINDING SITE FOR RESIDUE Z34 A 500 A Z34 500 Software 17 BINDING SITE FOR RESIDUE GOL L 501 L GOL 501 Software 5 BINDING SITE FOR RESIDUE GOL A 502 A GOL 502 Software 3 BINDING SITE FOR RESIDUE GOL A 503 A GOL 503 Software 7 BINDING SITE FOR RESIDUE GOL A 504 A GOL 504 Software 4 BINDING SITE FOR RESIDUE GOL A 505 A GOL 505 Software 5 BINDING SITE FOR RESIDUE GOL A 506 A GOL 506 Software 7 A ASP 70 A ASP 56 6 1_555 A ASN 72 A ASN 58 6 1_555 A GLN 75 A GLN 61 6 1_555 A GLU 77 A GLU 63 6 1_555 A GLU 80 A GLU 66 6 1_555 A HOH 612 L HOH 6 1_555 A ALA 81 A ALA 67 5 1_555 A HIS 83 A HIS 69 5 1_555 A THR 113 A THR 99 5 1_555 A ARG 115 A ARG 101 5 1_555 A ARG 125 A ARG 112 5 3_655 A LYS 96 A LYS 82 17 1_555 A GLU 97 A GLU 83 17 1_555 A THR 98 A THR 84 17 1_555 A PHE 174 A PHE 162 17 1_555 A ASP 189 A ASP 179 17 1_555 A ALA 190 A ALA 180 17 1_555 A GLN 192 A GLN 182 17 1_555 A SER 195 A SER 185 17 1_555 A VAL 213 A VAL 203 17 1_555 A TRP 215 A TRP 205 17 1_555 A GLY 216 A GLY 206 17 1_555 A GLY 218 A GLY 208 17 1_555 A GLY 226 A GLY 216 17 1_555 A HOH 605 L HOH 17 1_555 A HOH 606 L HOH 17 1_555 A HOH 608 L HOH 17 1_555 A HOH 712 L HOH 17 1_555 L PRO 126 B PRO 40 5 1_555 L GLY 128 B GLY 42 5 1_555 L PRO 129 B PRO 43 5 1_555 L PRO 131 B PRO 45 5 1_555 L HOH 617 M HOH 5 1_555 A GLU 124 A GLU 111 A 3 1_555 A ARG 125 A ARG 112 3 1_555 A GOL 505 I GOL 3 1_555 A PRO 111 A PRO 97 7 3_645 A MET 131 A MET 120 B 7 1_555 A ARG 165 A ARG 153 7 1_555 A LYS 230 A LYS 220 7 1_555 A HOH 688 L HOH 7 1_555 A HOH 700 L HOH 7 1_555 A HOH 735 L HOH 7 3_645 A ILE 89 A ILE 75 4 1_555 A LYS 90 A LYS 76 4 1_555 A ASN 92 A ASN 78 4 1_555 A TRP 237 A TRP 227 4 1_555 A LEU 123 A LEU 109 5 1_555 A PRO 124 A PRO 110 5 1_555 A GOL 502 F GOL 5 1_555 A HOH 622 L HOH 5 1_555 L ARG 113 B ARG 27 5 1_555 A LYS 65 A LYS 51 7 3_645 A GLU 84 A GLU 70 7 3_645 A ASP 126 A ASP 113 7 1_555 A TRP 127 A TRP 114 7 1_555 A SER 130 A SER 117 7 1_555 A HOH 761 L HOH 7 3_645 L CYS 100 B CYS 14 7 1_555 19 P 21 21 21