0.031797 0.000000 0.000000 0.000000 0.023052 0.000000 0.000000 0.000000 0.012975 0.00000 0.00000 0.00000 Holt, D.A. Luengo, J.I. Yamashita, D.S. Oh, H.-J. Konialian, A.L. Yen, H.-K. Rozamus, L.W. Brandt, M. Bossard, M.J. Levy, M.A. Eggleston, D.S. Stout, T.J. Liang, J. Schultz, L.W. Clardy, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 31.450 43.380 77.070 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C28 H41 N O4 455.629 1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Am.Chem.Soc. JACSAT 0004 0002-7863 115 9925 9938 -1 DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS AND THE X-RAY CRYSTAL-STRUCTURES OF THEIR COMPLEXES WITH FKBP12. 1993 UK J.Mol.Biol. JMOBAK 0070 0022-2836 229 105 Atomic Structures of the Human Immunophilin Fkbp-12 Complexes with Fk506 and Rapamycin 1993 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 11836.508 FK506 BINDING PROTEIN 1 man polymer 455.629 1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE 1 syn non-polymer 18.015 water 117 nat water no no GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY AYGATGHPGIIPPHATLVFDVELLKLE GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY AYGATGHPGIIPPHATLVFDVELLKLE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens 2.22 44.58 pdbx_database_status struct_conf struct_conf_type repository Initial release Version format compliance Version format compliance Derived calculations Other 1 0 1994-01-31 1 1 2008-03-03 1 2 2011-07-13 1 3 2017-11-29 _pdbx_database_status.process_site Y BNL 1993-08-05 REL SBX 1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE HOH water SBX 108 2 SBX SBX 108 A HOH 109 3 HOH HOH 109 A HOH 110 3 HOH HOH 110 A HOH 111 3 HOH HOH 111 A HOH 112 3 HOH HOH 112 A HOH 113 3 HOH HOH 113 A HOH 114 3 HOH HOH 114 A HOH 115 3 HOH HOH 115 A HOH 116 3 HOH HOH 116 A HOH 117 3 HOH HOH 117 A HOH 118 3 HOH HOH 118 A HOH 119 3 HOH HOH 119 A HOH 120 3 HOH HOH 120 A HOH 121 3 HOH HOH 121 A HOH 122 3 HOH HOH 122 A HOH 123 3 HOH HOH 123 A HOH 124 3 HOH HOH 124 A HOH 125 3 HOH HOH 125 A HOH 126 3 HOH HOH 126 A HOH 127 3 HOH HOH 127 A HOH 128 3 HOH HOH 128 A HOH 129 3 HOH HOH 129 A HOH 130 3 HOH HOH 130 A HOH 131 3 HOH HOH 131 A HOH 132 3 HOH HOH 132 A HOH 133 3 HOH HOH 133 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 136 3 HOH HOH 136 A HOH 137 3 HOH HOH 137 A HOH 138 3 HOH HOH 138 A HOH 139 3 HOH HOH 139 A HOH 140 3 HOH HOH 140 A HOH 141 3 HOH HOH 141 A HOH 142 3 HOH HOH 142 A HOH 143 3 HOH HOH 143 A HOH 144 3 HOH HOH 144 A HOH 145 3 HOH HOH 145 A HOH 146 3 HOH HOH 146 A HOH 147 3 HOH HOH 147 A HOH 148 3 HOH HOH 148 A HOH 149 3 HOH HOH 149 A HOH 150 3 HOH HOH 150 A HOH 151 3 HOH HOH 151 A HOH 152 3 HOH HOH 152 A HOH 153 3 HOH HOH 153 A HOH 154 3 HOH HOH 154 A HOH 155 3 HOH HOH 155 A HOH 156 3 HOH HOH 156 A HOH 157 3 HOH HOH 157 A HOH 158 3 HOH HOH 158 A HOH 159 3 HOH HOH 159 A HOH 160 3 HOH HOH 160 A HOH 161 3 HOH HOH 161 A HOH 162 3 HOH HOH 162 A HOH 163 3 HOH HOH 163 A HOH 164 3 HOH HOH 164 A HOH 165 3 HOH HOH 165 A HOH 166 3 HOH HOH 166 A HOH 167 3 HOH HOH 167 A HOH 168 3 HOH HOH 168 A HOH 169 3 HOH HOH 169 A HOH 170 3 HOH HOH 170 A HOH 171 3 HOH HOH 171 A HOH 172 3 HOH HOH 172 A HOH 173 3 HOH HOH 173 A HOH 174 3 HOH HOH 174 A HOH 175 3 HOH HOH 175 A HOH 176 3 HOH HOH 176 A HOH 177 3 HOH HOH 177 A HOH 178 3 HOH HOH 178 A HOH 179 3 HOH HOH 179 A HOH 180 3 HOH HOH 180 A HOH 181 3 HOH HOH 181 A HOH 182 3 HOH HOH 182 A HOH 183 3 HOH HOH 183 A HOH 184 3 HOH HOH 184 A HOH 185 3 HOH HOH 185 A HOH 186 3 HOH HOH 186 A HOH 187 3 HOH HOH 187 A HOH 188 3 HOH HOH 188 A HOH 189 3 HOH HOH 189 A HOH 190 3 HOH HOH 190 A HOH 191 3 HOH HOH 191 A HOH 192 3 HOH HOH 192 A HOH 193 3 HOH HOH 193 A HOH 194 3 HOH HOH 194 A HOH 195 3 HOH HOH 195 A HOH 196 3 HOH HOH 196 A HOH 197 3 HOH HOH 197 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 206 3 HOH HOH 206 A HOH 207 3 HOH HOH 207 A HOH 208 3 HOH HOH 208 A HOH 209 3 HOH HOH 209 A HOH 210 3 HOH HOH 210 A HOH 211 3 HOH HOH 211 A HOH 212 3 HOH HOH 212 A HOH 213 3 HOH HOH 213 A HOH 214 3 HOH HOH 214 A HOH 215 3 HOH HOH 215 A HOH 216 3 HOH HOH 216 A HOH 217 3 HOH HOH 217 A HOH 218 3 HOH HOH 218 A HOH 219 3 HOH HOH 219 A HOH 220 3 HOH HOH 220 A HOH 221 3 HOH HOH 221 A HOH 222 3 HOH HOH 222 A HOH 223 3 HOH HOH 223 A HOH 224 3 HOH HOH 224 A HOH 225 3 HOH HOH 225 A GLY 1 n 1 GLY 1 A VAL 2 n 2 VAL 2 A GLN 3 n 3 GLN 3 A VAL 4 n 4 VAL 4 A GLU 5 n 5 GLU 5 A THR 6 n 6 THR 6 A ILE 7 n 7 ILE 7 A SER 8 n 8 SER 8 A PRO 9 n 9 PRO 9 A GLY 10 n 10 GLY 10 A ASP 11 n 11 ASP 11 A GLY 12 n 12 GLY 12 A ARG 13 n 13 ARG 13 A THR 14 n 14 THR 14 A PHE 15 n 15 PHE 15 A PRO 16 n 16 PRO 16 A LYS 17 n 17 LYS 17 A ARG 18 n 18 ARG 18 A GLY 19 n 19 GLY 19 A GLN 20 n 20 GLN 20 A THR 21 n 21 THR 21 A CYS 22 n 22 CYS 22 A VAL 23 n 23 VAL 23 A VAL 24 n 24 VAL 24 A HIS 25 n 25 HIS 25 A TYR 26 n 26 TYR 26 A THR 27 n 27 THR 27 A GLY 28 n 28 GLY 28 A MET 29 n 29 MET 29 A LEU 30 n 30 LEU 30 A GLU 31 n 31 GLU 31 A ASP 32 n 32 ASP 32 A GLY 33 n 33 GLY 33 A LYS 34 n 34 LYS 34 A LYS 35 n 35 LYS 35 A PHE 36 n 36 PHE 36 A ASP 37 n 37 ASP 37 A SER 38 n 38 SER 38 A SER 39 n 39 SER 39 A ARG 40 n 40 ARG 40 A ASP 41 n 41 ASP 41 A ARG 42 n 42 ARG 42 A ASN 43 n 43 ASN 43 A LYS 44 n 44 LYS 44 A PRO 45 n 45 PRO 45 A PHE 46 n 46 PHE 46 A LYS 47 n 47 LYS 47 A PHE 48 n 48 PHE 48 A MET 49 n 49 MET 49 A LEU 50 n 50 LEU 50 A GLY 51 n 51 GLY 51 A LYS 52 n 52 LYS 52 A GLN 53 n 53 GLN 53 A GLU 54 n 54 GLU 54 A VAL 55 n 55 VAL 55 A ILE 56 n 56 ILE 56 A ARG 57 n 57 ARG 57 A GLY 58 n 58 GLY 58 A TRP 59 n 59 TRP 59 A GLU 60 n 60 GLU 60 A GLU 61 n 61 GLU 61 A GLY 62 n 62 GLY 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A GLN 65 n 65 GLN 65 A MET 66 n 66 MET 66 A SER 67 n 67 SER 67 A VAL 68 n 68 VAL 68 A GLY 69 n 69 GLY 69 A GLN 70 n 70 GLN 70 A ARG 71 n 71 ARG 71 A ALA 72 n 72 ALA 72 A LYS 73 n 73 LYS 73 A LEU 74 n 74 LEU 74 A THR 75 n 75 THR 75 A ILE 76 n 76 ILE 76 A SER 77 n 77 SER 77 A PRO 78 n 78 PRO 78 A ASP 79 n 79 ASP 79 A TYR 80 n 80 TYR 80 A ALA 81 n 81 ALA 81 A TYR 82 n 82 TYR 82 A GLY 83 n 83 GLY 83 A ALA 84 n 84 ALA 84 A THR 85 n 85 THR 85 A GLY 86 n 86 GLY 86 A HIS 87 n 87 HIS 87 A PRO 88 n 88 PRO 88 A GLY 89 n 89 GLY 89 A ILE 90 n 90 ILE 90 A ILE 91 n 91 ILE 91 A PRO 92 n 92 PRO 92 A PRO 93 n 93 PRO 93 A HIS 94 n 94 HIS 94 A ALA 95 n 95 ALA 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A VAL 98 n 98 VAL 98 A PHE 99 n 99 PHE 99 A ASP 100 n 100 ASP 100 A VAL 101 n 101 VAL 101 A GLU 102 n 102 GLU 102 A LEU 103 n 103 LEU 103 A LEU 104 n 104 LEU 104 A LYS 105 n 105 LYS 105 A LEU 106 n 106 LEU 106 A GLU 107 n 107 GLU 107 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLN 3 A N GLN 3 A O THR 75 A O THR 75 A O ILE 76 A O ILE 76 A N LEU 97 A N LEU 97 A O LYS 105 A O LYS 105 A N VAL 23 A N VAL 23 A O GLY 28 A O GLY 28 A N PHE 36 A N PHE 36 A N GLN 3 A N GLN 3 A O THR 75 A O THR 75 A O ILE 76 A O ILE 76 A N LEU 97 A N LEU 97 A O LYS 105 A O LYS 105 A N VAL 23 A N VAL 23 A O VAL 24 A O VAL 24 A N PHE 46 A N PHE 46 1 A A O4 O SBX HOH 108 124 0.62 1 A A HH11 H2 ARG HOH 42 148 1.17 1 A A HG1 H1 THR HOH 75 119 1.18 1 A A O4 H2 SBX HOH 108 124 1.29 1 A A O4 H1 SBX HOH 108 124 1.52 1 A A C9 O SBX HOH 108 124 1.82 1 -3.55 0.50 120.30 116.75 A A A NE CZ NH2 ARG ARG ARG 18 18 18 N 1 15.01 2.20 113.40 128.41 A A A CA CB CG LYS LYS LYS 34 34 34 N 1 3.75 0.50 120.30 124.05 A A A NE CZ NH1 ARG ARG ARG 40 40 40 N 1 6.91 0.80 106.30 113.21 A A A CD1 CG CD2 TRP TRP TRP 59 59 59 N 1 -5.95 0.80 107.30 101.35 A A A CE2 CD2 CG TRP TRP TRP 59 59 59 N 1 A A NE2 CD2 HIS HIS 87 87 -0.070 0.011 1.373 1.303 N 1 A A NE2 CD2 HIS HIS 94 94 -0.073 0.011 1.373 1.300 N 1 A ARG 13 -135.90 -36.67 1 A ALA 81 -132.16 -113.19 1 A PRO 88 -28.45 104.18 0.1610000 0.1610000 1.95 10.0 1 1.95 10.0 351 1406 33 0 1022 0.014 3.0 model building X-PLOR refinement X-PLOR phasing X-PLOR FK506 BINDING PROTEIN (FKBP) COMPLEX WITH ROTAMASE INHIBITOR (1R)-1-CYCLOHEXYL-3-PHENYL-1-PROPYL (2S)-1-(3,3-DIMETHYL-1,2-DIOXOPENTYL)-2-PIPERIDINECARBOXYLATE DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12 1 N N 2 N N 3 N N A ARG 57 A ARG 57 HELX_P A VAL 63 A VAL 63 1 A 7 CIS-TRANS ISOMERASE CIS-TRANS ISOMERASE FKB1A_HUMAN UNP 1 1 P62942 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY AYGATGHPGIIPPHATLVFDVELLKLE 1 107 1FKH 1 107 P62942 A 1 1 107 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 2 A VAL 2 A SER 8 A SER 8 A ARG 71 A ARG 71 A ILE 76 A ILE 76 A LEU 97 A LEU 97 A LEU 106 A LEU 106 A THR 21 A THR 21 A LEU 30 A LEU 30 A LYS 35 A LYS 35 A SER 38 A SER 38 A VAL 2 A VAL 2 A SER 8 A SER 8 A ARG 71 A ARG 71 A ILE 76 A ILE 76 A LEU 97 A LEU 97 A LEU 106 A LEU 106 A THR 21 A THR 21 A LEU 30 A LEU 30 A PHE 46 A PHE 46 A MET 49 A MET 49 Unknown 6 BINDING SITE FOR RESIDUE SBX A 108 Software 17 A TYR 26 A TYR 26 6 1_555 A PHE 46 A PHE 46 6 1_555 A VAL 55 A VAL 55 6 1_555 A ILE 56 A ILE 56 6 1_555 A TRP 59 A TRP 59 6 1_555 A PHE 99 A PHE 99 6 1_555 A ARG 18 A ARG 18 17 4_466 A TYR 26 A TYR 26 17 1_555 A PHE 36 A PHE 36 17 1_555 A ASP 37 A ASP 37 17 1_555 A LYS 44 A LYS 44 17 4_566 A GLY 51 A GLY 51 17 4_466 A LYS 52 A LYS 52 17 4_466 A GLU 54 A GLU 54 17 1_555 A VAL 55 A VAL 55 17 1_555 A ILE 56 A ILE 56 17 1_555 A TRP 59 A TRP 59 17 1_555 A TYR 82 A TYR 82 17 1_555 A HIS 87 A HIS 87 17 1_555 A PHE 99 A PHE 99 17 1_555 A HOH 124 C HOH 17 1_555 A HOH 163 C HOH 17 1_555 A HOH 223 C HOH 17 1_555 19 P 21 21 21