0.031797
0.000000
0.000000
0.000000
0.023052
0.000000
0.000000
0.000000
0.012975
0.00000
0.00000
0.00000
Holt, D.A.
Luengo, J.I.
Yamashita, D.S.
Oh, H.-J.
Konialian, A.L.
Yen, H.-K.
Rozamus, L.W.
Brandt, M.
Bossard, M.J.
Levy, M.A.
Eggleston, D.S.
Stout, T.J.
Liang, J.
Schultz, L.W.
Clardy, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
31.450
43.380
77.070
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C28 H41 N O4
455.629
1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
115
9925
9938
-1
DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS AND THE X-RAY CRYSTAL-STRUCTURES OF THEIR COMPLEXES WITH FKBP12.
1993
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
229
105
Atomic Structures of the Human Immunophilin Fkbp-12 Complexes with Fk506 and Rapamycin
1993
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
11836.508
FK506 BINDING PROTEIN
1
man
polymer
455.629
1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE
1
syn
non-polymer
18.015
water
117
nat
water
no
no
GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY
AYGATGHPGIIPPHATLVFDVELLKLE
GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY
AYGATGHPGIIPPHATLVFDVELLKLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
2.22
44.58
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1994-01-31
1
1
2008-03-03
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1993-08-05
REL
SBX
1-CYCLOHEXYL-3-PHENYL-1-PROPYL-1-(3,3-DIMETHYL-1,2-DIOXYPENTYL)-2-PIPERIDINE CARBOXYLATE
HOH
water
SBX
108
2
SBX
SBX
108
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
221
3
HOH
HOH
221
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
225
3
HOH
HOH
225
A
GLY
1
n
1
GLY
1
A
VAL
2
n
2
VAL
2
A
GLN
3
n
3
GLN
3
A
VAL
4
n
4
VAL
4
A
GLU
5
n
5
GLU
5
A
THR
6
n
6
THR
6
A
ILE
7
n
7
ILE
7
A
SER
8
n
8
SER
8
A
PRO
9
n
9
PRO
9
A
GLY
10
n
10
GLY
10
A
ASP
11
n
11
ASP
11
A
GLY
12
n
12
GLY
12
A
ARG
13
n
13
ARG
13
A
THR
14
n
14
THR
14
A
PHE
15
n
15
PHE
15
A
PRO
16
n
16
PRO
16
A
LYS
17
n
17
LYS
17
A
ARG
18
n
18
ARG
18
A
GLY
19
n
19
GLY
19
A
GLN
20
n
20
GLN
20
A
THR
21
n
21
THR
21
A
CYS
22
n
22
CYS
22
A
VAL
23
n
23
VAL
23
A
VAL
24
n
24
VAL
24
A
HIS
25
n
25
HIS
25
A
TYR
26
n
26
TYR
26
A
THR
27
n
27
THR
27
A
GLY
28
n
28
GLY
28
A
MET
29
n
29
MET
29
A
LEU
30
n
30
LEU
30
A
GLU
31
n
31
GLU
31
A
ASP
32
n
32
ASP
32
A
GLY
33
n
33
GLY
33
A
LYS
34
n
34
LYS
34
A
LYS
35
n
35
LYS
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
SER
39
n
39
SER
39
A
ARG
40
n
40
ARG
40
A
ASP
41
n
41
ASP
41
A
ARG
42
n
42
ARG
42
A
ASN
43
n
43
ASN
43
A
LYS
44
n
44
LYS
44
A
PRO
45
n
45
PRO
45
A
PHE
46
n
46
PHE
46
A
LYS
47
n
47
LYS
47
A
PHE
48
n
48
PHE
48
A
MET
49
n
49
MET
49
A
LEU
50
n
50
LEU
50
A
GLY
51
n
51
GLY
51
A
LYS
52
n
52
LYS
52
A
GLN
53
n
53
GLN
53
A
GLU
54
n
54
GLU
54
A
VAL
55
n
55
VAL
55
A
ILE
56
n
56
ILE
56
A
ARG
57
n
57
ARG
57
A
GLY
58
n
58
GLY
58
A
TRP
59
n
59
TRP
59
A
GLU
60
n
60
GLU
60
A
GLU
61
n
61
GLU
61
A
GLY
62
n
62
GLY
62
A
VAL
63
n
63
VAL
63
A
ALA
64
n
64
ALA
64
A
GLN
65
n
65
GLN
65
A
MET
66
n
66
MET
66
A
SER
67
n
67
SER
67
A
VAL
68
n
68
VAL
68
A
GLY
69
n
69
GLY
69
A
GLN
70
n
70
GLN
70
A
ARG
71
n
71
ARG
71
A
ALA
72
n
72
ALA
72
A
LYS
73
n
73
LYS
73
A
LEU
74
n
74
LEU
74
A
THR
75
n
75
THR
75
A
ILE
76
n
76
ILE
76
A
SER
77
n
77
SER
77
A
PRO
78
n
78
PRO
78
A
ASP
79
n
79
ASP
79
A
TYR
80
n
80
TYR
80
A
ALA
81
n
81
ALA
81
A
TYR
82
n
82
TYR
82
A
GLY
83
n
83
GLY
83
A
ALA
84
n
84
ALA
84
A
THR
85
n
85
THR
85
A
GLY
86
n
86
GLY
86
A
HIS
87
n
87
HIS
87
A
PRO
88
n
88
PRO
88
A
GLY
89
n
89
GLY
89
A
ILE
90
n
90
ILE
90
A
ILE
91
n
91
ILE
91
A
PRO
92
n
92
PRO
92
A
PRO
93
n
93
PRO
93
A
HIS
94
n
94
HIS
94
A
ALA
95
n
95
ALA
95
A
THR
96
n
96
THR
96
A
LEU
97
n
97
LEU
97
A
VAL
98
n
98
VAL
98
A
PHE
99
n
99
PHE
99
A
ASP
100
n
100
ASP
100
A
VAL
101
n
101
VAL
101
A
GLU
102
n
102
GLU
102
A
LEU
103
n
103
LEU
103
A
LEU
104
n
104
LEU
104
A
LYS
105
n
105
LYS
105
A
LEU
106
n
106
LEU
106
A
GLU
107
n
107
GLU
107
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
3
A
N
GLN
3
A
O
THR
75
A
O
THR
75
A
O
ILE
76
A
O
ILE
76
A
N
LEU
97
A
N
LEU
97
A
O
LYS
105
A
O
LYS
105
A
N
VAL
23
A
N
VAL
23
A
O
GLY
28
A
O
GLY
28
A
N
PHE
36
A
N
PHE
36
A
N
GLN
3
A
N
GLN
3
A
O
THR
75
A
O
THR
75
A
O
ILE
76
A
O
ILE
76
A
N
LEU
97
A
N
LEU
97
A
O
LYS
105
A
O
LYS
105
A
N
VAL
23
A
N
VAL
23
A
O
VAL
24
A
O
VAL
24
A
N
PHE
46
A
N
PHE
46
1
A
A
O4
O
SBX
HOH
108
124
0.62
1
A
A
HH11
H2
ARG
HOH
42
148
1.17
1
A
A
HG1
H1
THR
HOH
75
119
1.18
1
A
A
O4
H2
SBX
HOH
108
124
1.29
1
A
A
O4
H1
SBX
HOH
108
124
1.52
1
A
A
C9
O
SBX
HOH
108
124
1.82
1
-3.55
0.50
120.30
116.75
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
18
18
18
N
1
15.01
2.20
113.40
128.41
A
A
A
CA
CB
CG
LYS
LYS
LYS
34
34
34
N
1
3.75
0.50
120.30
124.05
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
40
40
40
N
1
6.91
0.80
106.30
113.21
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
59
59
59
N
1
-5.95
0.80
107.30
101.35
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
59
59
59
N
1
A
A
NE2
CD2
HIS
HIS
87
87
-0.070
0.011
1.373
1.303
N
1
A
A
NE2
CD2
HIS
HIS
94
94
-0.073
0.011
1.373
1.300
N
1
A
ARG
13
-135.90
-36.67
1
A
ALA
81
-132.16
-113.19
1
A
PRO
88
-28.45
104.18
0.1610000
0.1610000
1.95
10.0
1
1.95
10.0
351
1406
33
0
1022
0.014
3.0
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
FK506 BINDING PROTEIN (FKBP) COMPLEX WITH ROTAMASE INHIBITOR (1R)-1-CYCLOHEXYL-3-PHENYL-1-PROPYL (2S)-1-(3,3-DIMETHYL-1,2-DIOXOPENTYL)-2-PIPERIDINECARBOXYLATE
DESIGN, SYNTHESIS, AND KINETIC EVALUATION OF HIGH-AFFINITY FKBP LIGANDS, AND THE X-RAY CRYSTAL STRUCTURES OF THEIR COMPLEXES WITH FKBP12
1
N
N
2
N
N
3
N
N
A
ARG
57
A
ARG
57
HELX_P
A
VAL
63
A
VAL
63
1
A
7
CIS-TRANS ISOMERASE
CIS-TRANS ISOMERASE
FKB1A_HUMAN
UNP
1
1
P62942
GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDY
AYGATGHPGIIPPHATLVFDVELLKLE
1
107
1FKH
1
107
P62942
A
1
1
107
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
2
A
VAL
2
A
SER
8
A
SER
8
A
ARG
71
A
ARG
71
A
ILE
76
A
ILE
76
A
LEU
97
A
LEU
97
A
LEU
106
A
LEU
106
A
THR
21
A
THR
21
A
LEU
30
A
LEU
30
A
LYS
35
A
LYS
35
A
SER
38
A
SER
38
A
VAL
2
A
VAL
2
A
SER
8
A
SER
8
A
ARG
71
A
ARG
71
A
ILE
76
A
ILE
76
A
LEU
97
A
LEU
97
A
LEU
106
A
LEU
106
A
THR
21
A
THR
21
A
LEU
30
A
LEU
30
A
PHE
46
A
PHE
46
A
MET
49
A
MET
49
Unknown
6
BINDING SITE FOR RESIDUE SBX A 108
Software
17
A
TYR
26
A
TYR
26
6
1_555
A
PHE
46
A
PHE
46
6
1_555
A
VAL
55
A
VAL
55
6
1_555
A
ILE
56
A
ILE
56
6
1_555
A
TRP
59
A
TRP
59
6
1_555
A
PHE
99
A
PHE
99
6
1_555
A
ARG
18
A
ARG
18
17
4_466
A
TYR
26
A
TYR
26
17
1_555
A
PHE
36
A
PHE
36
17
1_555
A
ASP
37
A
ASP
37
17
1_555
A
LYS
44
A
LYS
44
17
4_566
A
GLY
51
A
GLY
51
17
4_466
A
LYS
52
A
LYS
52
17
4_466
A
GLU
54
A
GLU
54
17
1_555
A
VAL
55
A
VAL
55
17
1_555
A
ILE
56
A
ILE
56
17
1_555
A
TRP
59
A
TRP
59
17
1_555
A
TYR
82
A
TYR
82
17
1_555
A
HIS
87
A
HIS
87
17
1_555
A
PHE
99
A
PHE
99
17
1_555
A
HOH
124
C
HOH
17
1_555
A
HOH
163
C
HOH
17
1_555
A
HOH
223
C
HOH
17
1_555
19
P 21 21 21