0.020747 0.011978 0.000000 0.000000 0.023956 0.000000 0.000000 0.000000 0.008482 0.00000 0.00000 0.00000 Natarajan, K. Sawicki, M.W. Margulies, D.H. Mariuzza, R.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.0 90.0 120.0 48.2 48.2 117.9 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 39 14779 14786 10.1021/bi0018180 11101293 Crystal structure of human CD69: a C-type lectin-like activation marker of hematopoietic cells. 2000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200 1 CCD 2000-03-18 CUSTOM-MADE SINGLE WAVELENGTH M x-ray 1 1.08 1.0 19-ID APS 1.08 SYNCHROTRON APS BEAMLINE 19-ID 16098.035 EARLY ACTIVATION ANTIGEN CD69 C-TYPE LECTIN-LIKE DOMAIN 1 man polymer 18.015 water 128 nat water EARLY T-CELL ACTIVATION ANTIGEN P6, GP32/28, LEU-23, MLR-3, EA1, BL-AC/P26, ACTIVATION INDUCER MOLECULE, AIM no no MASGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE HWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK MASGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREE HWVGLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli PLASMID PET21A 1 2.46 49.92 VAPOR DIFFUSION, HANGING DROP 7.0 0.1M Sodium Acetate, pH 4.5, 0.2M Zinc Acetate, 20% PEG 1000, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K 298.0 repository Initial release Version format compliance Version format compliance Structure summary 1 0 2000-12-18 1 1 2008-04-27 1 2 2011-07-13 1 3 2016-09-21 RCSB Y RCSB 2000-08-16 REL HOH water TIP 201 2 HOH HOH 201 A TIP 202 2 HOH HOH 202 A TIP 203 2 HOH HOH 203 A TIP 204 2 HOH HOH 204 A TIP 205 2 HOH HOH 205 A TIP 206 2 HOH HOH 206 A TIP 207 2 HOH HOH 207 A TIP 208 2 HOH HOH 208 A TIP 209 2 HOH HOH 209 A TIP 210 2 HOH HOH 210 A TIP 211 2 HOH HOH 211 A TIP 212 2 HOH HOH 212 A TIP 213 2 HOH HOH 213 A TIP 214 2 HOH HOH 214 A TIP 215 2 HOH HOH 215 A TIP 216 2 HOH HOH 216 A TIP 217 2 HOH HOH 217 A TIP 218 2 HOH HOH 218 A TIP 219 2 HOH HOH 219 A TIP 220 2 HOH HOH 220 A TIP 221 2 HOH HOH 221 A TIP 222 2 HOH HOH 222 A TIP 223 2 HOH HOH 223 A TIP 224 2 HOH HOH 224 A TIP 225 2 HOH HOH 225 A TIP 226 2 HOH HOH 226 A TIP 227 2 HOH HOH 227 A TIP 228 2 HOH HOH 228 A TIP 229 2 HOH HOH 229 A TIP 230 2 HOH HOH 230 A TIP 231 2 HOH HOH 231 A TIP 232 2 HOH HOH 232 A TIP 233 2 HOH HOH 233 A TIP 234 2 HOH HOH 234 A TIP 235 2 HOH HOH 235 A TIP 236 2 HOH HOH 236 A TIP 237 2 HOH HOH 237 A TIP 238 2 HOH HOH 238 A TIP 239 2 HOH HOH 239 A TIP 240 2 HOH HOH 240 A TIP 241 2 HOH HOH 241 A TIP 242 2 HOH HOH 242 A TIP 243 2 HOH HOH 243 A TIP 244 2 HOH HOH 244 A TIP 245 2 HOH HOH 245 A TIP 246 2 HOH HOH 246 A TIP 247 2 HOH HOH 247 A TIP 248 2 HOH HOH 248 A TIP 249 2 HOH HOH 249 A TIP 250 2 HOH HOH 250 A TIP 251 2 HOH HOH 251 A TIP 252 2 HOH HOH 252 A TIP 253 2 HOH HOH 253 A TIP 254 2 HOH HOH 254 A TIP 255 2 HOH HOH 255 A TIP 256 2 HOH HOH 256 A TIP 257 2 HOH HOH 257 A TIP 258 2 HOH HOH 258 A TIP 259 2 HOH HOH 259 A TIP 260 2 HOH HOH 260 A TIP 261 2 HOH HOH 261 A TIP 262 2 HOH HOH 262 A TIP 263 2 HOH HOH 263 A TIP 264 2 HOH HOH 264 A TIP 265 2 HOH HOH 265 A TIP 266 2 HOH HOH 266 A TIP 267 2 HOH HOH 267 A TIP 268 2 HOH HOH 268 A TIP 269 2 HOH HOH 269 A TIP 270 2 HOH HOH 270 A TIP 271 2 HOH HOH 271 A TIP 272 2 HOH HOH 272 A TIP 273 2 HOH HOH 273 A TIP 274 2 HOH HOH 274 A TIP 275 2 HOH HOH 275 A TIP 276 2 HOH HOH 276 A TIP 277 2 HOH HOH 277 A TIP 278 2 HOH HOH 278 A TIP 279 2 HOH HOH 279 A TIP 280 2 HOH HOH 280 A TIP 281 2 HOH HOH 281 A TIP 282 2 HOH HOH 282 A TIP 283 2 HOH HOH 283 A TIP 284 2 HOH HOH 284 A TIP 285 2 HOH HOH 285 A TIP 286 2 HOH HOH 286 A TIP 287 2 HOH HOH 287 A TIP 288 2 HOH HOH 288 A TIP 289 2 HOH HOH 289 A TIP 290 2 HOH HOH 290 A TIP 291 2 HOH HOH 291 A TIP 292 2 HOH HOH 292 A TIP 293 2 HOH HOH 293 A TIP 294 2 HOH HOH 294 A TIP 295 2 HOH HOH 295 A TIP 296 2 HOH HOH 296 A TIP 297 2 HOH HOH 297 A TIP 298 2 HOH HOH 298 A TIP 299 2 HOH HOH 299 A TIP 300 2 HOH HOH 300 A TIP 301 2 HOH HOH 301 A TIP 302 2 HOH HOH 302 A TIP 303 2 HOH HOH 303 A TIP 304 2 HOH HOH 304 A TIP 305 2 HOH HOH 305 A TIP 306 2 HOH HOH 306 A TIP 307 2 HOH HOH 307 A TIP 308 2 HOH HOH 308 A TIP 309 2 HOH HOH 309 A TIP 310 2 HOH HOH 310 A TIP 311 2 HOH HOH 311 A TIP 312 2 HOH HOH 312 A TIP 313 2 HOH HOH 313 A TIP 314 2 HOH HOH 314 A TIP 315 2 HOH HOH 315 A TIP 316 2 HOH HOH 316 A TIP 317 2 HOH HOH 317 A TIP 318 2 HOH HOH 318 A TIP 319 2 HOH HOH 319 A TIP 320 2 HOH HOH 320 A TIP 321 2 HOH HOH 321 A TIP 322 2 HOH HOH 322 A TIP 323 2 HOH HOH 323 A TIP 324 2 HOH HOH 324 A TIP 325 2 HOH HOH 325 A TIP 326 2 HOH HOH 326 A TIP 327 2 HOH HOH 327 A TIP 328 2 HOH HOH 328 A n 1 61 A n 2 62 A n 3 63 A n 4 64 A n 5 65 A n 6 66 A n 7 67 A n 8 68 A n 9 69 A n 10 70 A n 11 71 A n 12 72 A n 13 73 A n 14 74 A n 15 75 A n 16 76 A n 17 77 A SER 78 n 18 SER 78 A ASP 79 n 19 ASP 79 A SER 80 n 20 SER 80 A n 21 81 A n 22 82 A n 23 83 A n 24 84 A CYS 85 n 25 CYS 85 A SER 86 n 26 SER 86 A GLU 87 n 27 GLU 87 A ASP 88 n 28 ASP 88 A TRP 89 n 29 TRP 89 A VAL 90 n 30 VAL 90 A GLY 91 n 31 GLY 91 A TYR 92 n 32 TYR 92 A GLN 93 n 33 GLN 93 A ARG 94 n 34 ARG 94 A LYS 95 n 35 LYS 95 A CYS 96 n 36 CYS 96 A TYR 97 n 37 TYR 97 A PHE 98 n 38 PHE 98 A ILE 99 n 39 ILE 99 A SER 100 n 40 SER 100 A THR 101 n 41 THR 101 A VAL 102 n 42 VAL 102 A LYS 103 n 43 LYS 103 A ARG 104 n 44 ARG 104 A SER 105 n 45 SER 105 A TRP 106 n 46 TRP 106 A THR 107 n 47 THR 107 A SER 108 n 48 SER 108 A ALA 109 n 49 ALA 109 A GLN 110 n 50 GLN 110 A ASN 111 n 51 ASN 111 A ALA 112 n 52 ALA 112 A CYS 113 n 53 CYS 113 A SER 114 n 54 SER 114 A GLU 115 n 55 GLU 115 A HIS 116 n 56 HIS 116 A GLY 117 n 57 GLY 117 A ALA 118 n 58 ALA 118 A THR 119 n 59 THR 119 A LEU 120 n 60 LEU 120 A ALA 121 n 61 ALA 121 A VAL 122 n 62 VAL 122 A ILE 123 n 63 ILE 123 A ASP 124 n 64 ASP 124 A SER 125 n 65 SER 125 A GLU 126 n 66 GLU 126 A LYS 127 n 67 LYS 127 A ASP 128 n 68 ASP 128 A MET 129 n 69 MET 129 A ASN 130 n 70 ASN 130 A PHE 131 n 71 PHE 131 A LEU 132 n 72 LEU 132 A LYS 133 n 73 LYS 133 A ARG 134 n 74 ARG 134 A TYR 135 n 75 TYR 135 A ALA 136 n 76 ALA 136 A GLY 137 n 77 GLY 137 A ARG 138 n 78 ARG 138 A GLU 139 n 79 GLU 139 A GLU 140 n 80 GLU 140 A HIS 141 n 81 HIS 141 A TRP 142 n 82 TRP 142 A VAL 143 n 83 VAL 143 A GLY 144 n 84 GLY 144 A LEU 145 n 85 LEU 145 A LYS 146 n 86 LYS 146 A LYS 147 n 87 LYS 147 A GLU 148 n 88 GLU 148 A PRO 149 n 89 PRO 149 A GLY 150 n 90 GLY 150 A HIS 151 n 91 HIS 151 A PRO 152 n 92 PRO 152 A TRP 153 n 93 TRP 153 A LYS 154 n 94 LYS 154 A TRP 155 n 95 TRP 155 A SER 156 n 96 SER 156 A ASN 157 n 97 ASN 157 A GLY 158 n 98 GLY 158 A LYS 159 n 99 LYS 159 A GLU 160 n 100 GLU 160 A PHE 161 n 101 PHE 161 A ASN 162 n 102 ASN 162 A ASN 163 n 103 ASN 163 A TRP 164 n 104 TRP 164 A PHE 165 n 105 PHE 165 A ASN 166 n 106 ASN 166 A VAL 167 n 107 VAL 167 A THR 168 n 108 THR 168 A GLY 169 n 109 GLY 169 A SER 170 n 110 SER 170 A ASP 171 n 111 ASP 171 A LYS 172 n 112 LYS 172 A CYS 173 n 113 CYS 173 A VAL 174 n 114 VAL 174 A PHE 175 n 115 PHE 175 A LEU 176 n 116 LEU 176 A LYS 177 n 117 LYS 177 A ASN 178 n 118 ASN 178 A THR 179 n 119 THR 179 A GLU 180 n 120 GLU 180 A VAL 181 n 121 VAL 181 A SER 182 n 122 SER 182 A SER 183 n 123 SER 183 A MET 184 n 124 MET 184 A GLU 185 n 125 GLU 185 A CYS 186 n 126 CYS 186 A GLU 187 n 127 GLU 187 A LYS 188 n 128 LYS 188 A ASN 189 n 129 ASN 189 A LEU 190 n 130 LEU 190 A TYR 191 n 131 TYR 191 A TRP 192 n 132 TRP 192 A ILE 193 n 133 ILE 193 A CYS 194 n 134 CYS 194 A ASN 195 n 135 ASN 195 A LYS 196 n 136 LYS 196 A PRO 197 n 137 PRO 197 A TYR 198 n 138 TYR 198 A LYS 199 n 139 LYS 199 A author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_665 -x+1,-x+y+1,-z+1/3 crystal symmetry operation 24.1000000000 41.7424244624 39.3000000000 A N VAL 90 A N VAL 30 A O TYR 97 A O TYR 37 A N CYS 96 A N CYS 36 A O LYS 196 A O LYS 136 A O TYR 191 A O TYR 131 A N TRP 142 A N TRP 82 A N LYS 146 A N LYS 86 A O LYS 154 A O LYS 94 A N THR 119 A N THR 59 A O ASN 195 A O ASN 135 A O TYR 191 A O TYR 131 A N TRP 142 A N TRP 82 A N LEU 145 A N LEU 85 A O VAL 174 A O VAL 114 A N CYS 173 A N CYS 113 A O MET 184 A O MET 124 1 A CA LYS 199 A CA LYS 139 1 Y 1 A C LYS 199 A C LYS 139 1 Y 1 A O LYS 199 A O LYS 139 1 Y 1 A CB LYS 199 A CB LYS 139 1 Y 1 A CG LYS 199 A CG LYS 139 1 Y 1 A CD LYS 199 A CD LYS 139 1 Y 1 A CE LYS 199 A CE LYS 139 1 Y 1 A NZ LYS 199 A NZ LYS 139 1 Y 1 A MET 61 A MET 1 1 Y 1 A ALA 62 A ALA 2 1 Y 1 A SER 63 A SER 3 1 Y 1 A GLY 64 A GLY 4 1 Y 1 A GLN 65 A GLN 5 1 Y 1 A TYR 66 A TYR 6 1 Y 1 A ASN 67 A ASN 7 1 Y 1 A CYS 68 A CYS 8 1 Y 1 A PRO 69 A PRO 9 1 Y 1 A GLY 70 A GLY 10 1 Y 1 A GLN 71 A GLN 11 1 Y 1 A TYR 72 A TYR 12 1 Y 1 A THR 73 A THR 13 1 Y 1 A PHE 74 A PHE 14 1 Y 1 A SER 75 A SER 15 1 Y 1 A MET 76 A MET 16 1 Y 1 A PRO 77 A PRO 17 1 Y 1 A HIS 81 A HIS 21 1 Y 1 A VAL 82 A VAL 22 1 Y 1 A SER 83 A SER 23 1 Y 1 A SER 84 A SER 24 1 Y 1 A A O OH SER TYR 78 135 2.17 1 A A OE1 O GLU HOH 87 273 2.15 1_555 4_555 1 A ASP 79 -161.76 -169.77 1 A ALA 121 -29.04 119.06 1 A PRO 149 -22.54 -61.28 1 A SER 182 -130.10 -155.23 1 A TYR 198 71.37 -63.11 0.299 0.243 2.27 15.0 354 7836 6598 5.4 Random 1 THROUGHOUT 2.0 Engh & Huber 2.27 15.0 128 1090 0 0 962 1.38 0.0069 22.7 0.76 2.27 50.0 1FM5 1.0 0.062 1 17.3 96.3 0.306 2.27 2.35 1 86.5 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS EARLY ACTIVATION ANTIGEN CD69 CRYSTAL STRUCTURE OF HUMAN CD69 1 N N 2 N N The biological assembly is a disulfide linked homodimer A SER 105 A SER 45 HELX_P A HIS 116 A HIS 56 1 1 12 A SER 125 A SER 65 HELX_P A GLY 137 A GLY 77 1 2 13 disulf 2.027 A CYS 85 A SG CYS 25 1_555 A CYS 96 A SG CYS 36 1_555 disulf 2.034 A CYS 113 A SG CYS 53 1_555 A CYS 194 A SG CYS 134 1_555 disulf 2.039 A CYS 173 A SG CYS 113 1_555 A CYS 186 A SG CYS 126 1_555 IMMUNE SYSTEM C-type Lectin-Like Domain, Natural Killer cell receptor, lectin, C-type Lectin, immune system CD69_HUMAN UNP 1 64 Q07108 GQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFISTVKRSWTSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWV GLKKEPGHPWKWSNGKEFNNWFNVTGSDKCVFLKNTEVSSMECEKNLYWICNKPYK 64 199 1FM5 64 199 Q07108 A 1 4 139 1 EXPRESSION TAG MET 61 1FM5 A Q07108 UNP 1 1 EXPRESSION TAG ALA 62 1FM5 A Q07108 UNP 2 1 EXPRESSION TAG SER 63 1FM5 A Q07108 UNP 3 5 5 anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A VAL 90 A VAL 30 A TYR 92 A TYR 32 A LYS 95 A LYS 35 A ILE 99 A ILE 39 A TYR 191 A TYR 131 A PRO 197 A PRO 137 A HIS 141 A HIS 81 A LYS 146 A LYS 86 A LYS 154 A LYS 94 A TRP 155 A TRP 95 A THR 119 A THR 59 A LEU 120 A LEU 60 A TYR 191 A TYR 131 A PRO 197 A PRO 137 A HIS 141 A HIS 81 A LYS 146 A LYS 86 A CYS 173 A CYS 113 A LEU 176 A LEU 116 A VAL 181 A VAL 121 A MET 184 A MET 124 152 trigonal P 31 2 1