1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Sarisky, C.A.
Mayo, S.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
307
1411
1418
10.1006/jmbi.2000.4345
11292351
The beta-beta-alpha fold: explorations in sequence space.
2001
10.2210/pdb1fme/pdb
pdb_00001fme
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3548.038
FSD-EY PEPTIDE
1
syn
polymer
no
no
EQYTAKYKGRTFRNEKELRDFIEKFKGR
EQYTAKYKGRTFRNEKELRDFIEKFKGR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2001-04-21
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
2000-08-16
REL
REL
Point mutant of sequence generated by ORBIT design process
sample
structures with the least restraint violations
49
34
2D NOESY
DQF-COSY
TOCSY
2D NOESY
5.0
ambient
280
K
X-PLOR: distance geometry, refinement
2 mM peptide
90% H2O, 10% D2O, 50mM phosphate buffer, pH 5.0
2 mM peptide
D2O, 50mM phosphate buffer, pH 5.0
Per Kraulis
data analysis
ANSIG
collection
VNMR
6.1
refinement
X-PLOR
3.857
600
Varian
UNITYPLUS
GLU
1
n
1
GLU
1
A
GLN
2
n
2
GLN
2
A
TYR
3
n
3
TYR
3
A
THR
4
n
4
THR
4
A
ALA
5
n
5
ALA
5
A
LYS
6
n
6
LYS
6
A
TYR
7
n
7
TYR
7
A
LYS
8
n
8
LYS
8
A
GLY
9
n
9
GLY
9
A
ARG
10
n
10
ARG
10
A
THR
11
n
11
THR
11
A
PHE
12
n
12
PHE
12
A
ARG
13
n
13
ARG
13
A
ASN
14
n
14
ASN
14
A
GLU
15
n
15
GLU
15
A
LYS
16
n
16
LYS
16
A
GLU
17
n
17
GLU
17
A
LEU
18
n
18
LEU
18
A
ARG
19
n
19
ARG
19
A
ASP
20
n
20
ASP
20
A
PHE
21
n
21
PHE
21
A
ILE
22
n
22
ILE
22
A
GLU
23
n
23
GLU
23
A
LYS
24
n
24
LYS
24
A
PHE
25
n
25
PHE
25
A
LYS
26
n
26
LYS
26
A
GLY
27
n
27
GLY
27
A
ARG
28
n
28
ARG
28
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ALA
5
A
O
ALA
5
A
N
PHE
12
A
N
PHE
12
18
A
A
O
H
THR
PHE
4
12
1.59
19
A
A
O
H
THR
PHE
4
12
1.56
20
A
A
O
H
THR
PHE
4
12
1.59
1
A
ARG
10
0.292
SIDE CHAIN
1
A
ARG
13
0.316
SIDE CHAIN
1
A
ARG
19
0.215
SIDE CHAIN
1
A
ARG
28
0.317
SIDE CHAIN
2
A
ARG
10
0.262
SIDE CHAIN
2
A
ARG
13
0.249
SIDE CHAIN
2
A
ARG
19
0.292
SIDE CHAIN
2
A
ARG
28
0.213
SIDE CHAIN
3
A
ARG
10
0.283
SIDE CHAIN
3
A
ARG
13
0.301
SIDE CHAIN
3
A
ARG
19
0.294
SIDE CHAIN
3
A
ARG
28
0.209
SIDE CHAIN
4
A
ARG
10
0.219
SIDE CHAIN
4
A
ARG
13
0.242
SIDE CHAIN
4
A
ARG
19
0.204
SIDE CHAIN
4
A
ARG
28
0.286
SIDE CHAIN
5
A
ARG
10
0.313
SIDE CHAIN
5
A
ARG
13
0.227
SIDE CHAIN
5
A
ARG
19
0.314
SIDE CHAIN
5
A
ARG
28
0.314
SIDE CHAIN
6
A
ARG
10
0.279
SIDE CHAIN
6
A
ARG
13
0.211
SIDE CHAIN
6
A
ARG
19
0.225
SIDE CHAIN
6
A
ARG
28
0.229
SIDE CHAIN
7
A
ARG
10
0.281
SIDE CHAIN
7
A
ARG
13
0.263
SIDE CHAIN
7
A
ARG
19
0.279
SIDE CHAIN
7
A
ARG
28
0.316
SIDE CHAIN
8
A
ARG
10
0.221
SIDE CHAIN
8
A
ARG
13
0.296
SIDE CHAIN
8
A
ARG
19
0.294
SIDE CHAIN
8
A
ARG
28
0.280
SIDE CHAIN
9
A
ARG
10
0.215
SIDE CHAIN
9
A
ARG
13
0.293
SIDE CHAIN
9
A
ARG
19
0.315
SIDE CHAIN
9
A
ARG
28
0.281
SIDE CHAIN
10
A
ARG
10
0.288
SIDE CHAIN
10
A
ARG
13
0.310
SIDE CHAIN
10
A
ARG
19
0.232
SIDE CHAIN
10
A
ARG
28
0.307
SIDE CHAIN
11
A
ARG
10
0.315
SIDE CHAIN
11
A
ARG
13
0.265
SIDE CHAIN
11
A
ARG
19
0.213
SIDE CHAIN
11
A
ARG
28
0.316
SIDE CHAIN
12
A
ARG
10
0.305
SIDE CHAIN
12
A
ARG
13
0.316
SIDE CHAIN
12
A
ARG
19
0.296
SIDE CHAIN
12
A
ARG
28
0.317
SIDE CHAIN
13
A
ARG
10
0.214
SIDE CHAIN
13
A
ARG
13
0.267
SIDE CHAIN
13
A
ARG
19
0.227
SIDE CHAIN
13
A
ARG
28
0.221
SIDE CHAIN
14
A
ARG
10
0.265
SIDE CHAIN
14
A
ARG
13
0.227
SIDE CHAIN
14
A
ARG
19
0.223
SIDE CHAIN
14
A
ARG
28
0.317
SIDE CHAIN
15
A
ARG
10
0.276
SIDE CHAIN
15
A
ARG
13
0.247
SIDE CHAIN
15
A
ARG
19
0.318
SIDE CHAIN
15
A
ARG
28
0.292
SIDE CHAIN
16
A
ARG
10
0.210
SIDE CHAIN
16
A
ARG
13
0.272
SIDE CHAIN
16
A
ARG
19
0.317
SIDE CHAIN
16
A
ARG
28
0.219
SIDE CHAIN
17
A
ARG
10
0.235
SIDE CHAIN
17
A
ARG
13
0.231
SIDE CHAIN
17
A
ARG
19
0.275
SIDE CHAIN
17
A
ARG
28
0.257
SIDE CHAIN
18
A
ARG
10
0.212
SIDE CHAIN
18
A
ARG
13
0.212
SIDE CHAIN
18
A
ARG
19
0.307
SIDE CHAIN
18
A
ARG
28
0.212
SIDE CHAIN
19
A
ARG
10
0.318
SIDE CHAIN
19
A
ARG
13
0.240
SIDE CHAIN
19
A
ARG
19
0.315
SIDE CHAIN
19
A
ARG
28
0.303
SIDE CHAIN
20
A
ARG
10
0.298
SIDE CHAIN
20
A
ARG
13
0.317
SIDE CHAIN
20
A
ARG
19
0.205
SIDE CHAIN
20
A
ARG
28
0.230
SIDE CHAIN
21
A
ARG
10
0.308
SIDE CHAIN
21
A
ARG
13
0.235
SIDE CHAIN
21
A
ARG
19
0.304
SIDE CHAIN
21
A
ARG
28
0.238
SIDE CHAIN
22
A
ARG
10
0.315
SIDE CHAIN
22
A
ARG
13
0.270
SIDE CHAIN
22
A
ARG
19
0.308
SIDE CHAIN
22
A
ARG
28
0.288
SIDE CHAIN
23
A
ARG
10
0.288
SIDE CHAIN
23
A
ARG
13
0.315
SIDE CHAIN
23
A
ARG
19
0.278
SIDE CHAIN
23
A
ARG
28
0.269
SIDE CHAIN
24
A
ARG
10
0.251
SIDE CHAIN
24
A
ARG
13
0.227
SIDE CHAIN
24
A
ARG
19
0.270
SIDE CHAIN
24
A
ARG
28
0.316
SIDE CHAIN
25
A
ARG
10
0.278
SIDE CHAIN
25
A
ARG
13
0.305
SIDE CHAIN
25
A
ARG
19
0.317
SIDE CHAIN
25
A
ARG
28
0.305
SIDE CHAIN
26
A
ARG
10
0.225
SIDE CHAIN
26
A
ARG
13
0.251
SIDE CHAIN
26
A
ARG
19
0.278
SIDE CHAIN
26
A
ARG
28
0.310
SIDE CHAIN
27
A
ARG
10
0.245
SIDE CHAIN
27
A
ARG
13
0.286
SIDE CHAIN
27
A
ARG
19
0.316
SIDE CHAIN
27
A
ARG
28
0.278
SIDE CHAIN
28
A
ARG
10
0.317
SIDE CHAIN
28
A
ARG
13
0.315
SIDE CHAIN
28
A
ARG
19
0.253
SIDE CHAIN
28
A
ARG
28
0.258
SIDE CHAIN
29
A
ARG
10
0.268
SIDE CHAIN
29
A
ARG
13
0.297
SIDE CHAIN
29
A
ARG
19
0.281
SIDE CHAIN
29
A
ARG
28
0.231
SIDE CHAIN
30
A
ARG
10
0.317
SIDE CHAIN
30
A
ARG
13
0.231
SIDE CHAIN
30
A
ARG
19
0.311
SIDE CHAIN
30
A
ARG
28
0.269
SIDE CHAIN
31
A
ARG
10
0.316
SIDE CHAIN
31
A
ARG
13
0.265
SIDE CHAIN
31
A
ARG
19
0.290
SIDE CHAIN
31
A
ARG
28
0.252
SIDE CHAIN
32
A
ARG
10
0.263
SIDE CHAIN
32
A
ARG
13
0.217
SIDE CHAIN
32
A
ARG
19
0.313
SIDE CHAIN
32
A
ARG
28
0.297
SIDE CHAIN
33
A
ARG
10
0.317
SIDE CHAIN
33
A
ARG
13
0.274
SIDE CHAIN
33
A
ARG
19
0.246
SIDE CHAIN
33
A
ARG
28
0.260
SIDE CHAIN
34
A
ARG
10
0.294
SIDE CHAIN
34
A
ARG
13
0.299
SIDE CHAIN
34
A
ARG
19
0.313
SIDE CHAIN
34
A
ARG
28
0.277
SIDE CHAIN
1
A
TYR
7
-126.50
-68.79
1
A
LYS
8
-118.77
59.16
1
A
PHE
21
-68.42
-74.37
2
A
TYR
3
-48.62
153.35
2
A
THR
4
-98.45
31.46
2
A
TYR
7
-124.11
-68.65
2
A
LYS
8
-115.62
60.97
2
A
PHE
21
-64.51
-73.17
3
A
TYR
3
-49.72
154.82
3
A
TYR
7
-124.37
-64.92
3
A
PHE
21
-63.47
-73.89
4
A
TYR
7
-126.49
-77.44
4
A
LYS
8
-109.76
53.61
5
A
ASN
14
-170.73
121.44
5
A
PHE
21
-68.78
-74.56
6
A
PHE
21
-71.17
-75.78
8
A
TYR
3
-50.29
171.06
8
A
ASN
14
-175.09
130.87
8
A
GLU
17
-61.47
-70.07
9
A
THR
4
-107.27
54.14
9
A
ALA
5
-58.54
-162.36
9
A
LYS
6
176.87
150.70
9
A
TYR
7
-142.30
-44.05
9
A
PHE
21
-69.30
-73.79
10
A
GLN
2
-104.78
-164.24
10
A
TYR
3
-47.30
162.25
10
A
PHE
21
-64.74
-73.65
11
A
GLN
2
-108.92
-168.74
11
A
TYR
3
-47.49
162.88
11
A
PHE
21
-63.63
-74.66
12
A
THR
4
-109.43
42.82
12
A
PHE
21
-65.62
-73.10
13
A
TYR
7
-139.55
-63.24
14
A
TYR
3
-54.52
179.12
14
A
TYR
7
-125.41
-77.50
14
A
LYS
8
-118.15
54.48
14
A
PHE
25
-59.33
-96.24
14
A
LYS
26
-151.86
-70.10
15
A
TYR
3
-51.74
176.71
15
A
TYR
7
-125.79
-75.71
15
A
LYS
8
-118.54
55.95
15
A
PHE
25
-55.15
-95.04
15
A
LYS
26
-151.45
-62.25
16
A
TYR
7
-124.39
-54.50
16
A
PHE
25
-50.13
-93.56
16
A
LYS
26
-147.39
-65.71
17
A
TYR
3
-49.53
165.34
17
A
PHE
21
-69.56
-73.90
18
A
TYR
3
-69.44
-170.39
18
A
THR
4
-108.25
-71.39
18
A
ALA
5
48.54
111.22
18
A
TYR
7
-123.99
-79.24
18
A
LYS
8
-113.07
59.41
19
A
THR
4
-110.20
-77.67
19
A
ALA
5
54.79
110.43
19
A
ASN
14
-170.77
139.67
19
A
PHE
21
-66.02
-76.11
20
A
THR
4
-111.24
-75.10
20
A
ALA
5
55.70
117.11
20
A
ASN
14
-175.45
133.33
20
A
PHE
21
-67.02
-74.25
21
A
THR
4
-108.52
57.90
21
A
ALA
5
-59.06
-162.41
21
A
LYS
6
176.04
142.76
21
A
LYS
8
68.21
-62.77
21
A
PHE
21
-68.92
-73.93
21
A
PHE
25
-111.10
67.64
22
A
TYR
3
-47.71
160.13
22
A
PHE
21
-80.86
-74.24
22
A
PHE
25
-59.57
-92.15
22
A
LYS
26
-153.43
-63.85
23
A
GLN
2
-95.69
-156.06
23
A
TYR
3
-28.40
144.21
23
A
THR
4
-158.19
27.52
23
A
LYS
8
-154.03
57.95
23
A
PHE
21
-58.78
-74.17
24
A
PHE
21
-67.87
-73.64
24
A
PHE
25
-56.22
-91.95
24
A
LYS
26
-147.63
-62.34
25
A
GLN
2
-163.37
-156.19
25
A
TYR
3
-25.25
141.39
25
A
THR
4
-156.18
25.23
25
A
TYR
7
-126.70
-60.13
26
A
TYR
3
-54.99
171.80
26
A
ASN
14
-171.23
137.84
26
A
PHE
25
-49.00
-94.84
26
A
LYS
26
-152.13
-67.64
27
A
GLN
2
-158.76
-154.84
27
A
TYR
3
-30.02
137.47
27
A
THR
4
-158.26
25.71
27
A
LYS
8
-154.21
57.67
27
A
ARG
13
-98.35
30.52
27
A
PHE
21
-61.23
-73.44
27
A
PHE
25
-102.85
65.12
28
A
GLN
2
-161.05
-156.39
28
A
TYR
3
-22.67
137.87
28
A
THR
4
-156.47
24.11
28
A
TYR
7
-125.72
-68.03
28
A
LYS
8
-108.08
51.44
28
A
PHE
21
-60.26
-72.78
28
A
PHE
25
-91.79
47.62
29
A
GLN
2
-137.95
-157.44
29
A
TYR
3
-27.26
145.64
29
A
THR
4
-155.81
21.88
29
A
PHE
21
-72.18
-74.73
30
A
GLN
2
53.75
-158.25
30
A
TYR
3
-15.23
136.36
30
A
THR
4
-153.65
21.65
30
A
PHE
21
-62.59
-75.02
31
A
GLN
2
55.23
174.12
31
A
TYR
3
-52.30
175.57
31
A
PHE
25
-54.54
-98.38
31
A
LYS
26
-153.56
-46.86
32
A
GLN
2
-140.11
-157.81
32
A
TYR
3
-21.01
140.22
32
A
THR
4
-155.27
21.45
32
A
ALA
5
-62.34
-161.48
32
A
LYS
6
-177.55
-27.66
32
A
TYR
7
54.16
-89.55
32
A
LYS
8
-94.16
-60.46
33
A
TYR
3
30.54
-155.39
33
A
THR
4
93.92
33.67
33
A
TYR
7
-124.44
-67.93
34
A
TYR
3
29.90
-155.48
34
A
THR
4
89.03
35.74
34
A
PHE
21
-64.52
-73.10
SOLUTION STRUCTURE OF FSD-EY, A NOVEL PEPTIDE ASSUMING A BETA-BETA-ALPHA FOLD
1
N
N
A
ASN
14
A
ASN
14
HELX_P
A
PHE
25
A
PHE
25
1
1
12
DE NOVO PROTEIN
beta-beta-alpha, zinc finger, FSD-1, designed protein, de novo protein
1FME
PDB
1
1FME
1
28
1FME
1
28
1FME
A
1
1
28
2
anti-parallel
A
ALA
5
A
ALA
5
A
LYS
6
A
LYS
6
A
THR
11
A
THR
11
A
PHE
12
A
PHE
12
1
P 1