1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Sarisky, C.A. Mayo, S.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 307 1411 1418 10.1006/jmbi.2000.4345 11292351 The beta-beta-alpha fold: explorations in sequence space. 2001 10.2210/pdb1fme/pdb pdb_00001fme 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 3548.038 FSD-EY PEPTIDE 1 syn polymer no no EQYTAKYKGRTFRNEKELRDFIEKFKGR EQYTAKYKGRTFRNEKELRDFIEKFKGR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 2001-04-21 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2000-08-16 REL REL Point mutant of sequence generated by ORBIT design process sample structures with the least restraint violations 49 34 2D NOESY DQF-COSY TOCSY 2D NOESY 5.0 ambient 280 K X-PLOR: distance geometry, refinement 2 mM peptide 90% H2O, 10% D2O, 50mM phosphate buffer, pH 5.0 2 mM peptide D2O, 50mM phosphate buffer, pH 5.0 Per Kraulis data analysis ANSIG collection VNMR 6.1 refinement X-PLOR 3.857 600 Varian UNITYPLUS GLU 1 n 1 GLU 1 A GLN 2 n 2 GLN 2 A TYR 3 n 3 TYR 3 A THR 4 n 4 THR 4 A ALA 5 n 5 ALA 5 A LYS 6 n 6 LYS 6 A TYR 7 n 7 TYR 7 A LYS 8 n 8 LYS 8 A GLY 9 n 9 GLY 9 A ARG 10 n 10 ARG 10 A THR 11 n 11 THR 11 A PHE 12 n 12 PHE 12 A ARG 13 n 13 ARG 13 A ASN 14 n 14 ASN 14 A GLU 15 n 15 GLU 15 A LYS 16 n 16 LYS 16 A GLU 17 n 17 GLU 17 A LEU 18 n 18 LEU 18 A ARG 19 n 19 ARG 19 A ASP 20 n 20 ASP 20 A PHE 21 n 21 PHE 21 A ILE 22 n 22 ILE 22 A GLU 23 n 23 GLU 23 A LYS 24 n 24 LYS 24 A PHE 25 n 25 PHE 25 A LYS 26 n 26 LYS 26 A GLY 27 n 27 GLY 27 A ARG 28 n 28 ARG 28 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ALA 5 A O ALA 5 A N PHE 12 A N PHE 12 18 A A O H THR PHE 4 12 1.59 19 A A O H THR PHE 4 12 1.56 20 A A O H THR PHE 4 12 1.59 1 A ARG 10 0.292 SIDE CHAIN 1 A ARG 13 0.316 SIDE CHAIN 1 A ARG 19 0.215 SIDE CHAIN 1 A ARG 28 0.317 SIDE CHAIN 2 A ARG 10 0.262 SIDE CHAIN 2 A ARG 13 0.249 SIDE CHAIN 2 A ARG 19 0.292 SIDE CHAIN 2 A ARG 28 0.213 SIDE CHAIN 3 A ARG 10 0.283 SIDE CHAIN 3 A ARG 13 0.301 SIDE CHAIN 3 A ARG 19 0.294 SIDE CHAIN 3 A ARG 28 0.209 SIDE CHAIN 4 A ARG 10 0.219 SIDE CHAIN 4 A ARG 13 0.242 SIDE CHAIN 4 A ARG 19 0.204 SIDE CHAIN 4 A ARG 28 0.286 SIDE CHAIN 5 A ARG 10 0.313 SIDE CHAIN 5 A ARG 13 0.227 SIDE CHAIN 5 A ARG 19 0.314 SIDE CHAIN 5 A ARG 28 0.314 SIDE CHAIN 6 A ARG 10 0.279 SIDE CHAIN 6 A ARG 13 0.211 SIDE CHAIN 6 A ARG 19 0.225 SIDE CHAIN 6 A ARG 28 0.229 SIDE CHAIN 7 A ARG 10 0.281 SIDE CHAIN 7 A ARG 13 0.263 SIDE CHAIN 7 A ARG 19 0.279 SIDE CHAIN 7 A ARG 28 0.316 SIDE CHAIN 8 A ARG 10 0.221 SIDE CHAIN 8 A ARG 13 0.296 SIDE CHAIN 8 A ARG 19 0.294 SIDE CHAIN 8 A ARG 28 0.280 SIDE CHAIN 9 A ARG 10 0.215 SIDE CHAIN 9 A ARG 13 0.293 SIDE CHAIN 9 A ARG 19 0.315 SIDE CHAIN 9 A ARG 28 0.281 SIDE CHAIN 10 A ARG 10 0.288 SIDE CHAIN 10 A ARG 13 0.310 SIDE CHAIN 10 A ARG 19 0.232 SIDE CHAIN 10 A ARG 28 0.307 SIDE CHAIN 11 A ARG 10 0.315 SIDE CHAIN 11 A ARG 13 0.265 SIDE CHAIN 11 A ARG 19 0.213 SIDE CHAIN 11 A ARG 28 0.316 SIDE CHAIN 12 A ARG 10 0.305 SIDE CHAIN 12 A ARG 13 0.316 SIDE CHAIN 12 A ARG 19 0.296 SIDE CHAIN 12 A ARG 28 0.317 SIDE CHAIN 13 A ARG 10 0.214 SIDE CHAIN 13 A ARG 13 0.267 SIDE CHAIN 13 A ARG 19 0.227 SIDE CHAIN 13 A ARG 28 0.221 SIDE CHAIN 14 A ARG 10 0.265 SIDE CHAIN 14 A ARG 13 0.227 SIDE CHAIN 14 A ARG 19 0.223 SIDE CHAIN 14 A ARG 28 0.317 SIDE CHAIN 15 A ARG 10 0.276 SIDE CHAIN 15 A ARG 13 0.247 SIDE CHAIN 15 A ARG 19 0.318 SIDE CHAIN 15 A ARG 28 0.292 SIDE CHAIN 16 A ARG 10 0.210 SIDE CHAIN 16 A ARG 13 0.272 SIDE CHAIN 16 A ARG 19 0.317 SIDE CHAIN 16 A ARG 28 0.219 SIDE CHAIN 17 A ARG 10 0.235 SIDE CHAIN 17 A ARG 13 0.231 SIDE CHAIN 17 A ARG 19 0.275 SIDE CHAIN 17 A ARG 28 0.257 SIDE CHAIN 18 A ARG 10 0.212 SIDE CHAIN 18 A ARG 13 0.212 SIDE CHAIN 18 A ARG 19 0.307 SIDE CHAIN 18 A ARG 28 0.212 SIDE CHAIN 19 A ARG 10 0.318 SIDE CHAIN 19 A ARG 13 0.240 SIDE CHAIN 19 A ARG 19 0.315 SIDE CHAIN 19 A ARG 28 0.303 SIDE CHAIN 20 A ARG 10 0.298 SIDE CHAIN 20 A ARG 13 0.317 SIDE CHAIN 20 A ARG 19 0.205 SIDE CHAIN 20 A ARG 28 0.230 SIDE CHAIN 21 A ARG 10 0.308 SIDE CHAIN 21 A ARG 13 0.235 SIDE CHAIN 21 A ARG 19 0.304 SIDE CHAIN 21 A ARG 28 0.238 SIDE CHAIN 22 A ARG 10 0.315 SIDE CHAIN 22 A ARG 13 0.270 SIDE CHAIN 22 A ARG 19 0.308 SIDE CHAIN 22 A ARG 28 0.288 SIDE CHAIN 23 A ARG 10 0.288 SIDE CHAIN 23 A ARG 13 0.315 SIDE CHAIN 23 A ARG 19 0.278 SIDE CHAIN 23 A ARG 28 0.269 SIDE CHAIN 24 A ARG 10 0.251 SIDE CHAIN 24 A ARG 13 0.227 SIDE CHAIN 24 A ARG 19 0.270 SIDE CHAIN 24 A ARG 28 0.316 SIDE CHAIN 25 A ARG 10 0.278 SIDE CHAIN 25 A ARG 13 0.305 SIDE CHAIN 25 A ARG 19 0.317 SIDE CHAIN 25 A ARG 28 0.305 SIDE CHAIN 26 A ARG 10 0.225 SIDE CHAIN 26 A ARG 13 0.251 SIDE CHAIN 26 A ARG 19 0.278 SIDE CHAIN 26 A ARG 28 0.310 SIDE CHAIN 27 A ARG 10 0.245 SIDE CHAIN 27 A ARG 13 0.286 SIDE CHAIN 27 A ARG 19 0.316 SIDE CHAIN 27 A ARG 28 0.278 SIDE CHAIN 28 A ARG 10 0.317 SIDE CHAIN 28 A ARG 13 0.315 SIDE CHAIN 28 A ARG 19 0.253 SIDE CHAIN 28 A ARG 28 0.258 SIDE CHAIN 29 A ARG 10 0.268 SIDE CHAIN 29 A ARG 13 0.297 SIDE CHAIN 29 A ARG 19 0.281 SIDE CHAIN 29 A ARG 28 0.231 SIDE CHAIN 30 A ARG 10 0.317 SIDE CHAIN 30 A ARG 13 0.231 SIDE CHAIN 30 A ARG 19 0.311 SIDE CHAIN 30 A ARG 28 0.269 SIDE CHAIN 31 A ARG 10 0.316 SIDE CHAIN 31 A ARG 13 0.265 SIDE CHAIN 31 A ARG 19 0.290 SIDE CHAIN 31 A ARG 28 0.252 SIDE CHAIN 32 A ARG 10 0.263 SIDE CHAIN 32 A ARG 13 0.217 SIDE CHAIN 32 A ARG 19 0.313 SIDE CHAIN 32 A ARG 28 0.297 SIDE CHAIN 33 A ARG 10 0.317 SIDE CHAIN 33 A ARG 13 0.274 SIDE CHAIN 33 A ARG 19 0.246 SIDE CHAIN 33 A ARG 28 0.260 SIDE CHAIN 34 A ARG 10 0.294 SIDE CHAIN 34 A ARG 13 0.299 SIDE CHAIN 34 A ARG 19 0.313 SIDE CHAIN 34 A ARG 28 0.277 SIDE CHAIN 1 A TYR 7 -126.50 -68.79 1 A LYS 8 -118.77 59.16 1 A PHE 21 -68.42 -74.37 2 A TYR 3 -48.62 153.35 2 A THR 4 -98.45 31.46 2 A TYR 7 -124.11 -68.65 2 A LYS 8 -115.62 60.97 2 A PHE 21 -64.51 -73.17 3 A TYR 3 -49.72 154.82 3 A TYR 7 -124.37 -64.92 3 A PHE 21 -63.47 -73.89 4 A TYR 7 -126.49 -77.44 4 A LYS 8 -109.76 53.61 5 A ASN 14 -170.73 121.44 5 A PHE 21 -68.78 -74.56 6 A PHE 21 -71.17 -75.78 8 A TYR 3 -50.29 171.06 8 A ASN 14 -175.09 130.87 8 A GLU 17 -61.47 -70.07 9 A THR 4 -107.27 54.14 9 A ALA 5 -58.54 -162.36 9 A LYS 6 176.87 150.70 9 A TYR 7 -142.30 -44.05 9 A PHE 21 -69.30 -73.79 10 A GLN 2 -104.78 -164.24 10 A TYR 3 -47.30 162.25 10 A PHE 21 -64.74 -73.65 11 A GLN 2 -108.92 -168.74 11 A TYR 3 -47.49 162.88 11 A PHE 21 -63.63 -74.66 12 A THR 4 -109.43 42.82 12 A PHE 21 -65.62 -73.10 13 A TYR 7 -139.55 -63.24 14 A TYR 3 -54.52 179.12 14 A TYR 7 -125.41 -77.50 14 A LYS 8 -118.15 54.48 14 A PHE 25 -59.33 -96.24 14 A LYS 26 -151.86 -70.10 15 A TYR 3 -51.74 176.71 15 A TYR 7 -125.79 -75.71 15 A LYS 8 -118.54 55.95 15 A PHE 25 -55.15 -95.04 15 A LYS 26 -151.45 -62.25 16 A TYR 7 -124.39 -54.50 16 A PHE 25 -50.13 -93.56 16 A LYS 26 -147.39 -65.71 17 A TYR 3 -49.53 165.34 17 A PHE 21 -69.56 -73.90 18 A TYR 3 -69.44 -170.39 18 A THR 4 -108.25 -71.39 18 A ALA 5 48.54 111.22 18 A TYR 7 -123.99 -79.24 18 A LYS 8 -113.07 59.41 19 A THR 4 -110.20 -77.67 19 A ALA 5 54.79 110.43 19 A ASN 14 -170.77 139.67 19 A PHE 21 -66.02 -76.11 20 A THR 4 -111.24 -75.10 20 A ALA 5 55.70 117.11 20 A ASN 14 -175.45 133.33 20 A PHE 21 -67.02 -74.25 21 A THR 4 -108.52 57.90 21 A ALA 5 -59.06 -162.41 21 A LYS 6 176.04 142.76 21 A LYS 8 68.21 -62.77 21 A PHE 21 -68.92 -73.93 21 A PHE 25 -111.10 67.64 22 A TYR 3 -47.71 160.13 22 A PHE 21 -80.86 -74.24 22 A PHE 25 -59.57 -92.15 22 A LYS 26 -153.43 -63.85 23 A GLN 2 -95.69 -156.06 23 A TYR 3 -28.40 144.21 23 A THR 4 -158.19 27.52 23 A LYS 8 -154.03 57.95 23 A PHE 21 -58.78 -74.17 24 A PHE 21 -67.87 -73.64 24 A PHE 25 -56.22 -91.95 24 A LYS 26 -147.63 -62.34 25 A GLN 2 -163.37 -156.19 25 A TYR 3 -25.25 141.39 25 A THR 4 -156.18 25.23 25 A TYR 7 -126.70 -60.13 26 A TYR 3 -54.99 171.80 26 A ASN 14 -171.23 137.84 26 A PHE 25 -49.00 -94.84 26 A LYS 26 -152.13 -67.64 27 A GLN 2 -158.76 -154.84 27 A TYR 3 -30.02 137.47 27 A THR 4 -158.26 25.71 27 A LYS 8 -154.21 57.67 27 A ARG 13 -98.35 30.52 27 A PHE 21 -61.23 -73.44 27 A PHE 25 -102.85 65.12 28 A GLN 2 -161.05 -156.39 28 A TYR 3 -22.67 137.87 28 A THR 4 -156.47 24.11 28 A TYR 7 -125.72 -68.03 28 A LYS 8 -108.08 51.44 28 A PHE 21 -60.26 -72.78 28 A PHE 25 -91.79 47.62 29 A GLN 2 -137.95 -157.44 29 A TYR 3 -27.26 145.64 29 A THR 4 -155.81 21.88 29 A PHE 21 -72.18 -74.73 30 A GLN 2 53.75 -158.25 30 A TYR 3 -15.23 136.36 30 A THR 4 -153.65 21.65 30 A PHE 21 -62.59 -75.02 31 A GLN 2 55.23 174.12 31 A TYR 3 -52.30 175.57 31 A PHE 25 -54.54 -98.38 31 A LYS 26 -153.56 -46.86 32 A GLN 2 -140.11 -157.81 32 A TYR 3 -21.01 140.22 32 A THR 4 -155.27 21.45 32 A ALA 5 -62.34 -161.48 32 A LYS 6 -177.55 -27.66 32 A TYR 7 54.16 -89.55 32 A LYS 8 -94.16 -60.46 33 A TYR 3 30.54 -155.39 33 A THR 4 93.92 33.67 33 A TYR 7 -124.44 -67.93 34 A TYR 3 29.90 -155.48 34 A THR 4 89.03 35.74 34 A PHE 21 -64.52 -73.10 SOLUTION STRUCTURE OF FSD-EY, A NOVEL PEPTIDE ASSUMING A BETA-BETA-ALPHA FOLD 1 N N A ASN 14 A ASN 14 HELX_P A PHE 25 A PHE 25 1 1 12 DE NOVO PROTEIN beta-beta-alpha, zinc finger, FSD-1, designed protein, de novo protein 1FME PDB 1 1FME 1 28 1FME 1 28 1FME A 1 1 28 2 anti-parallel A ALA 5 A ALA 5 A LYS 6 A LYS 6 A THR 11 A THR 11 A PHE 12 A PHE 12 1 P 1