69.52 15.610 8.186 5.104 A P DG 1002 ATOM A P DG 1 1 1.00 1 P 70.93 16.986 7.938 5.202 A OP1 DG 1002 ATOM A OP1 DG 1 1 1.00 1 O 54.57 15.029 9.282 4.439 A OP2 DG 1002 ATOM A OP2 DG 1 1 1.00 1 O 52.86 15.068 8.297 6.633 A O5' DG 1002 ATOM A O5' DG 1 1 1.00 1 O 37.45 15.062 7.120 7.491 A C5' DG 1002 ATOM A C5' DG 1 1 1.00 1 C 35.02 14.920 7.768 8.920 A C4' DG 1002 ATOM A C4' DG 1 1 1.00 1 C 36.83 16.004 8.714 9.258 A O4' DG 1002 ATOM A O4' DG 1 1 1.00 1 O 31.04 13.555 8.501 9.194 A C3' DG 1002 ATOM A C3' DG 1 1 1.00 1 C 36.56 13.151 8.118 10.407 A O3' DG 1002 ATOM A O3' DG 1 1 1.00 1 O 31.25 13.966 9.944 9.066 A C2' DG 1002 ATOM A C2' DG 1 1 1.00 1 C 29.95 15.394 10.026 9.616 A C1' DG 1002 ATOM A C1' DG 1 1 1.00 1 C 27.52 16.452 10.912 9.115 A N9 DG 1002 ATOM A N9 DG 1 1 1.00 1 N 23.19 16.817 11.049 7.778 A C8 DG 1002 ATOM A C8 DG 1 1 1.00 1 C 33.91 17.787 11.899 7.595 A N7 DG 1002 ATOM A N7 DG 1 1 1.00 1 N 31.06 18.095 12.361 8.871 A C5 DG 1002 ATOM A C5 DG 1 1 1.00 1 C 19.85 19.071 13.300 9.266 A C6 DG 1002 ATOM A C6 DG 1 1 1.00 1 C 28.61 19.890 13.945 8.604 A O6 DG 1002 ATOM A O6 DG 1 1 1.00 1 O 21.90 19.068 13.500 10.665 A N1 DG 1002 ATOM A N1 DG 1 1 1.00 1 N 21.61 18.213 12.844 11.486 A C2 DG 1002 ATOM A C2 DG 1 1 1.00 1 C 24.33 18.306 13.118 12.801 A N2 DG 1002 ATOM A N2 DG 1 1 1.00 1 N 26.16 17.306 11.973 11.118 A N3 DG 1002 ATOM A N3 DG 1 1 1.00 1 N 25.47 17.281 11.759 9.803 A C4 DG 1002 ATOM A C4 DG 1 1 1.00 1 C 26.57 14.370 13.975 11.203 A N1 BRU 1003 HETATM A N1 BRU 1 2 1.00 1 N 26.84 15.427 14.844 11.439 A C2 BRU 1003 HETATM A C2 BRU 1 2 1.00 1 C 22.47 16.095 15.308 10.365 A N3 BRU 1003 HETATM A N3 BRU 1 2 1.00 1 N 22.03 15.847 14.995 9.041 A C4 BRU 1003 HETATM A C4 BRU 1 2 1.00 1 C 27.75 14.750 14.103 8.871 A C5 BRU 1003 HETATM A C5 BRU 1 2 1.00 1 C 33.22 14.047 13.614 9.908 A C6 BRU 1003 HETATM A C6 BRU 1 2 1.00 1 C 24.92 15.767 15.206 12.560 A O2 BRU 1003 HETATM A O2 BRU 1 2 1.00 1 O 28.47 16.559 15.509 8.168 A O4 BRU 1003 HETATM A O4 BRU 1 2 1.00 1 O 36.17 14.271 13.583 7.123 A BR BRU 1003 HETATM A BR BRU 1 2 1.00 1 BR 32.44 13.656 13.483 12.331 A C1' BRU 1003 HETATM A C1' BRU 1 2 1.00 1 C 26.66 12.139 13.586 12.438 A C2' BRU 1003 HETATM A C2' BRU 1 2 1.00 1 C 31.23 11.693 12.361 13.212 A C3' BRU 1003 HETATM A C3' BRU 1 2 1.00 1 C 32.16 12.950 11.404 13.149 A C4' BRU 1003 HETATM A C4' BRU 1 2 1.00 1 C 33.75 11.475 12.512 14.517 A O3' BRU 1003 HETATM A O3' BRU 1 2 1.00 1 O 26.59 13.924 12.015 12.223 A O4' BRU 1003 HETATM A O4' BRU 1 2 1.00 1 O 25.15 12.649 9.895 12.824 A C5' BRU 1003 HETATM A C5' BRU 1 2 1.00 1 C 34.93 11.870 10.035 11.569 A O5' BRU 1003 HETATM A O5' BRU 1 2 1.00 1 O 42.87 11.595 8.632 10.810 A P BRU 1003 HETATM A P BRU 1 2 1.00 1 P 43.95 11.178 7.755 11.804 A OP1 BRU 1003 HETATM A OP1 BRU 1 2 1.00 1 O 55.28 11.013 8.936 9.578 A OP2 BRU 1003 HETATM A OP2 BRU 1 2 1.00 1 O 41.00 10.492 13.594 15.267 A P DA 1004 ATOM A P DA 1 3 1.00 1 P 45.46 10.492 13.160 16.606 A OP1 DA 1004 ATOM A OP1 DA 1 3 1.00 1 O 47.42 9.409 13.779 14.406 A OP2 DA 1004 ATOM A OP2 DA 1 3 1.00 1 O 30.37 11.284 15.012 15.234 A O5' DA 1004 ATOM A O5' DA 1 3 1.00 1 O 28.22 12.394 14.960 16.194 A C5' DA 1004 ATOM A C5' DA 1 3 1.00 1 C 26.19 12.902 16.448 16.214 A C4' DA 1004 ATOM A C4' DA 1 3 1.00 1 C 28.93 13.701 16.729 15.006 A O4' DA 1004 ATOM A O4' DA 1 3 1.00 1 O 20.50 11.808 17.577 16.393 A C3' DA 1004 ATOM A C3' DA 1 3 1.00 1 C 31.40 12.198 18.309 17.420 A O3' DA 1004 ATOM A O3' DA 1 3 1.00 1 O 24.78 11.855 18.252 15.038 A C2' DA 1004 ATOM A C2' DA 1 3 1.00 1 C 35.14 13.274 18.034 14.490 A C1' DA 1004 ATOM A C1' DA 1 3 1.00 1 C 26.16 13.533 17.918 13.044 A N9 DA 1004 ATOM A N9 DA 1 3 1.00 1 N 32.46 12.844 17.208 12.110 A C8 DA 1004 ATOM A C8 DA 1 3 1.00 1 C 31.17 13.341 17.315 10.897 A N7 DA 1004 ATOM A N7 DA 1 3 1.00 1 N 22.68 14.420 18.148 11.061 A C5 DA 1004 ATOM A C5 DA 1 3 1.00 1 C 23.86 15.350 18.638 10.119 A C6 DA 1004 ATOM A C6 DA 1 3 1.00 1 C 33.02 15.266 18.296 8.818 A N6 DA 1004 ATOM A N6 DA 1 3 1.00 1 N 27.09 16.309 19.440 10.563 A N1 DA 1004 ATOM A N1 DA 1 3 1.00 1 N 28.14 16.343 19.746 11.871 A C2 DA 1004 ATOM A C2 DA 1 3 1.00 1 C 24.64 15.527 19.350 12.852 A N3 DA 1004 ATOM A N3 DA 1 3 1.00 1 N 28.26 14.563 18.536 12.373 A C4 DA 1004 ATOM A C4 DA 1 3 1.00 1 C 39.87 11.159 19.544 17.856 A P DC 1005 ATOM A P DC 1 4 1.00 1 P 45.73 11.549 19.881 19.166 A OP1 DC 1005 ATOM A OP1 DC 1 4 1.00 1 O 31.14 9.920 19.159 17.362 A OP2 DC 1005 ATOM A OP2 DC 1 4 1.00 1 O 28.19 11.655 20.800 16.976 A O5' DC 1005 ATOM A O5' DC 1 4 1.00 1 O 27.99 13.028 21.192 17.280 A C5' DC 1005 ATOM A C5' DC 1 4 1.00 1 C 31.75 13.236 22.165 16.046 A C4' DC 1005 ATOM A C4' DC 1 4 1.00 1 C 28.52 13.418 21.410 14.800 A O4' DC 1005 ATOM A O4' DC 1 4 1.00 1 O 31.22 12.126 23.242 15.796 A C3' DC 1005 ATOM A C3' DC 1 4 1.00 1 C 29.69 12.565 24.345 16.351 A O3' DC 1005 ATOM A O3' DC 1 4 1.00 1 O 42.83 12.069 23.316 14.289 A C2' DC 1005 ATOM A C2' DC 1 4 1.00 1 C 30.68 13.185 22.428 13.745 A C1' DC 1005 ATOM A C1' DC 1 4 1.00 1 C 27.10 12.884 21.769 12.517 A N1 DC 1005 ATOM A N1 DC 1 4 1.00 1 N 29.24 13.677 22.011 11.400 A C2 DC 1005 ATOM A C2 DC 1 4 1.00 1 C 26.66 14.616 22.798 11.534 A O2 DC 1005 ATOM A O2 DC 1 4 1.00 1 O 32.34 13.383 21.384 10.254 A N3 DC 1005 ATOM A N3 DC 1 4 1.00 1 N 26.61 12.362 20.553 10.170 A C4 DC 1005 ATOM A C4 DC 1 4 1.00 1 C 30.81 12.123 19.959 8.998 A N4 DC 1005 ATOM A N4 DC 1 4 1.00 1 N 28.55 11.515 20.266 11.293 A C5 DC 1005 ATOM A C5 DC 1 4 1.00 1 C 25.85 11.818 20.890 12.425 A C6 DC 1005 ATOM A C6 DC 1 4 1.00 1 C 38.09 11.652 25.692 16.714 A P DG 1006 ATOM A P DG 1 5 1.00 1 P 47.47 12.336 26.404 17.684 A OP1 DG 1006 ATOM A OP1 DG 1 5 1.00 1 O 40.54 10.321 25.237 16.746 A OP2 DG 1006 ATOM A OP2 DG 1 5 1.00 1 O 32.42 11.726 26.568 15.327 A O5' DG 1006 ATOM A O5' DG 1 5 1.00 1 O 36.23 12.962 27.352 15.178 A C5' DG 1006 ATOM A C5' DG 1 5 1.00 1 C 27.89 12.516 28.565 14.270 A C4' DG 1006 ATOM A C4' DG 1 5 1.00 1 C 33.06 11.915 28.132 12.988 A O4' DG 1006 ATOM A O4' DG 1 5 1.00 1 O 35.96 11.522 29.610 14.904 A C3' DG 1006 ATOM A C3' DG 1 5 1.00 1 C 35.98 12.207 30.490 15.629 A O3' DG 1006 ATOM A O3' DG 1 5 1.00 1 O 27.71 10.909 30.214 13.665 A C2' DG 1006 ATOM A C2' DG 1 5 1.00 1 C 26.37 10.856 29.105 12.610 A C1' DG 1006 ATOM A C1' DG 1 5 1.00 1 C 26.56 9.685 28.230 12.439 A N9 DG 1006 ATOM A N9 DG 1 5 1.00 1 N 30.15 8.707 27.884 13.327 A C8 DG 1006 ATOM A C8 DG 1 5 1.00 1 C 29.44 7.787 27.072 12.861 A N7 DG 1006 ATOM A N7 DG 1 5 1.00 1 N 26.89 8.194 26.864 11.550 A C5 DG 1006 ATOM A C5 DG 1 5 1.00 1 C 30.41 7.600 26.074 10.535 A C6 DG 1006 ATOM A C6 DG 1 5 1.00 1 C 28.02 6.581 25.391 10.595 A O6 DG 1006 ATOM A O6 DG 1 5 1.00 1 O 28.17 8.364 26.171 9.371 A N1 DG 1006 ATOM A N1 DG 1 5 1.00 1 N 23.46 9.497 26.900 9.225 A C2 DG 1006 ATOM A C2 DG 1 5 1.00 1 C 27.96 10.135 26.896 8.030 A N2 DG 1006 ATOM A N2 DG 1 5 1.00 1 N 30.96 10.063 27.643 10.167 A N3 DG 1006 ATOM A N3 DG 1 5 1.00 1 N 22.33 9.334 27.558 11.291 A C4 DG 1006 ATOM A C4 DG 1 5 1.00 1 C 45.10 23.720 24.147 -1.124 B O5' DC 2001 ATOM B O5' DC 2 1 0.00 1 O 45.10 22.561 23.313 -0.778 B C5' DC 2001 ATOM B C5' DC 2 1 1.00 1 C 38.02 21.378 24.083 -1.493 B C4' DC 2001 ATOM B C4' DC 2 1 1.00 1 C 31.70 21.746 24.487 -2.859 B O4' DC 2001 ATOM B O4' DC 2 1 1.00 1 O 39.59 19.991 23.351 -1.581 B C3' DC 2001 ATOM B C3' DC 2 1 1.00 1 C 40.63 19.038 24.250 -1.408 B O3' DC 2001 ATOM B O3' DC 2 1 1.00 1 O 36.91 20.116 22.774 -2.990 B C2' DC 2001 ATOM B C2' DC 2 1 1.00 1 C 29.07 20.688 23.968 -3.780 B C1' DC 2001 ATOM B C1' DC 2 1 1.00 1 C 30.54 21.347 23.802 -5.037 B N1 DC 2001 ATOM B N1 DC 2 1 1.00 1 N 30.19 20.921 24.591 -6.119 B C2 DC 2001 ATOM B C2 DC 2 1 1.00 1 C 25.89 19.999 25.357 -5.865 B O2 DC 2001 ATOM B O2 DC 2 1 1.00 1 O 34.39 21.499 24.486 -7.326 B N3 DC 2001 ATOM B N3 DC 2 1 1.00 1 N 32.76 22.500 23.623 -7.519 B C4 DC 2001 ATOM B C4 DC 2 1 1.00 1 C 30.68 23.056 23.543 -8.739 B N4 DC 2001 ATOM B N4 DC 2 1 1.00 1 N 38.59 22.968 22.807 -6.451 B C5 DC 2001 ATOM B C5 DC 2 1 1.00 1 C 33.93 22.377 22.923 -5.256 B C6 DC 2001 ATOM B C6 DC 2 1 1.00 1 C 52.32 18.022 23.654 -0.213 B P DG 2002 ATOM B P DG 2 2 1.00 1 P 75.81 17.844 22.307 -0.554 B OP1 DG 2002 ATOM B OP1 DG 2 2 1.00 1 O 45.54 17.006 24.618 -0.096 B OP2 DG 2002 ATOM B OP2 DG 2 2 1.00 1 O 33.45 18.928 23.705 1.116 B O5' DG 2002 ATOM B O5' DG 2 2 1.00 1 O 33.62 19.090 25.171 1.274 B C5' DG 2002 ATOM B C5' DG 2 2 1.00 1 C 33.56 19.090 25.428 2.828 B C4' DG 2002 ATOM B C4' DG 2 2 1.00 1 C 29.07 17.747 25.453 3.438 B O4' DG 2002 ATOM B O4' DG 2 2 1.00 1 O 29.01 19.940 24.429 3.700 B C3' DG 2002 ATOM B C3' DG 2 2 1.00 1 C 27.53 21.180 24.785 3.574 B O3' DG 2002 ATOM B O3' DG 2 2 1.00 1 O 31.39 19.363 24.694 5.079 B C2' DG 2002 ATOM B C2' DG 2 2 1.00 1 C 28.62 17.882 24.977 4.852 B C1' DG 2002 ATOM B C1' DG 2 2 1.00 1 C 30.46 16.850 23.925 4.918 B N9 DG 2002 ATOM B N9 DG 2 2 1.00 1 N 33.67 16.250 23.219 3.909 B C8 DG 2002 ATOM B C8 DG 2 2 1.00 1 C 33.60 15.376 22.364 4.339 B N7 DG 2002 ATOM B N7 DG 2 2 1.00 1 N 27.36 15.389 22.505 5.735 B C5 DG 2002 ATOM B C5 DG 2 2 1.00 1 C 25.09 14.670 21.860 6.765 B C6 DG 2002 ATOM B C6 DG 2 2 1.00 1 C 30.24 13.809 20.974 6.702 B O6 DG 2002 ATOM B O6 DG 2 2 1.00 1 O 24.08 15.035 22.348 8.022 B N1 DG 2002 ATOM B N1 DG 2 2 1.00 1 N 26.47 15.969 23.323 8.232 B C2 DG 2002 ATOM B C2 DG 2 2 1.00 1 C 30.62 16.218 23.692 9.492 B N2 DG 2002 ATOM B N2 DG 2 2 1.00 1 N 25.68 16.656 23.942 7.295 B N3 DG 2002 ATOM B N3 DG 2 2 1.00 1 N 23.92 16.294 23.461 6.091 B C4 DG 2002 ATOM B C4 DG 2 2 1.00 1 C 31.56 20.051 22.069 8.460 B N1 BRU 2003 HETATM B N1 BRU 2 3 1.00 1 N 33.09 19.167 21.508 9.349 B C2 BRU 2003 HETATM B C2 BRU 2 3 1.00 1 C 28.70 18.184 20.712 8.824 B N3 BRU 2003 HETATM B N3 BRU 2 3 1.00 1 N 23.53 17.967 20.397 7.498 B C4 BRU 2003 HETATM B C4 BRU 2 3 1.00 1 C 25.91 18.948 21.034 6.639 B C5 BRU 2003 HETATM B C5 BRU 2 3 1.00 1 C 22.44 19.897 21.798 7.115 B C6 BRU 2003 HETATM B C6 BRU 2 3 1.00 1 C 30.55 19.275 21.721 10.541 B O2 BRU 2003 HETATM B O2 BRU 2 3 1.00 1 O 27.32 17.075 19.684 7.065 B O4 BRU 2003 HETATM B O4 BRU 2 3 1.00 1 O 34.98 18.915 20.806 4.795 B BR BRU 2003 HETATM B BR BRU 2 3 1.00 1 BR 24.97 21.111 22.908 8.907 B C1' BRU 2003 HETATM B C1' BRU 2 3 1.00 1 C 22.51 22.533 22.380 8.572 B C2' BRU 2003 HETATM B C2' BRU 2 3 1.00 1 C 28.02 23.376 23.652 8.534 B C3' BRU 2003 HETATM B C3' BRU 2 3 1.00 1 C 25.26 22.377 24.669 7.912 B C4' BRU 2003 HETATM B C4' BRU 2 3 1.00 1 C 38.13 23.727 24.088 9.741 B O3' BRU 2003 HETATM B O3' BRU 2 3 1.00 1 O 30.22 21.003 24.214 8.247 B O4' BRU 2003 HETATM B O4' BRU 2 3 1.00 1 O 26.33 22.575 24.973 6.367 B C5' BRU 2003 HETATM B C5' BRU 2 3 1.00 1 C 27.05 22.115 23.761 5.760 B O5' BRU 2003 HETATM B O5' BRU 2 3 1.00 1 O 34.53 22.337 23.723 4.120 B P BRU 2003 HETATM B P BRU 2 3 1.00 1 P 31.16 23.556 24.404 3.948 B OP1 BRU 2003 HETATM B OP1 BRU 2 3 1.00 1 O 36.00 21.946 22.450 3.724 B OP2 BRU 2003 HETATM B OP2 BRU 2 3 1.00 1 O 41.10 24.830 23.226 10.687 B P DA 2004 ATOM B P DA 2 4 1.00 1 P 43.62 25.493 24.237 11.381 B OP1 DA 2004 ATOM B OP1 DA 2 4 1.00 1 O 35.26 25.303 22.212 9.833 B OP2 DA 2004 ATOM B OP2 DA 2 4 1.00 1 O 32.27 23.871 22.491 11.772 B O5' DA 2004 ATOM B O5' DA 2 4 1.00 1 O 32.23 22.997 23.364 12.571 B C5' DA 2004 ATOM B C5' DA 2 4 1.00 1 C 35.81 22.425 22.379 13.664 B C4' DA 2004 ATOM B C4' DA 2 4 1.00 1 C 33.04 21.266 21.561 13.217 B O4' DA 2004 ATOM B O4' DA 2 4 1.00 1 O 28.78 23.501 21.401 14.303 B C3' DA 2004 ATOM B C3' DA 2 4 1.00 1 C 30.11 23.259 21.345 15.621 B O3' DA 2004 ATOM B O3' DA 2 4 1.00 1 O 23.45 23.211 20.168 13.521 B C2' DA 2004 ATOM B C2' DA 2 4 1.00 1 C 24.07 21.677 20.150 13.257 B C1' DA 2004 ATOM B C1' DA 2 4 1.00 1 C 26.58 21.174 19.529 12.027 B N9 DA 2004 ATOM B N9 DA 2 4 1.00 1 N 25.10 21.683 19.771 10.768 B C8 DA 2004 ATOM B C8 DA 2 4 1.00 1 C 29.60 21.067 19.104 9.835 B N7 DA 2004 ATOM B N7 DA 2 4 1.00 1 N 22.58 20.101 18.374 10.502 B C5 DA 2004 ATOM B C5 DA 2 4 1.00 1 C 23.23 19.131 17.475 10.049 B C6 DA 2004 ATOM B C6 DA 2 4 1.00 1 C 27.84 18.989 17.157 8.763 B N6 DA 2004 ATOM B N6 DA 2 4 1.00 1 N 25.46 18.317 16.922 10.968 B N1 DA 2004 ATOM B N1 DA 2 4 1.00 1 N 27.83 18.487 17.266 12.256 B C2 DA 2004 ATOM B C2 DA 2 4 1.00 1 C 24.44 19.363 18.099 12.790 B N3 DA 2004 ATOM B N3 DA 2 4 1.00 1 N 22.82 20.156 18.634 11.861 B C4 DA 2004 ATOM B C4 DA 2 4 1.00 1 C 30.52 24.347 20.624 16.648 B P DC 2005 ATOM B P DC 2 5 1.00 1 P 35.82 23.962 21.104 17.939 B OP1 DC 2005 ATOM B OP1 DC 2 5 1.00 1 O 32.24 25.608 20.731 16.104 B OP2 DC 2005 ATOM B OP2 DC 2 5 1.00 1 O 25.15 23.925 19.059 16.645 B O5' DC 2005 ATOM B O5' DC 2 5 1.00 1 O 30.40 22.623 18.756 17.241 B C5' DC 2005 ATOM B C5' DC 2 5 1.00 1 C 21.23 22.394 17.245 16.849 B C4' DC 2005 ATOM B C4' DC 2 5 1.00 1 C 21.67 21.937 17.100 15.425 B O4' DC 2005 ATOM B O4' DC 2 5 1.00 1 O 17.30 23.572 16.246 17.049 B C3' DC 2005 ATOM B C3' DC 2 5 1.00 1 C 22.47 23.149 15.198 17.795 B O3' DC 2005 ATOM B O3' DC 2 5 1.00 1 O 23.42 23.907 15.828 15.642 B C2' DC 2005 ATOM B C2' DC 2 5 1.00 1 C 23.38 22.522 15.834 14.954 B C1' DC 2005 ATOM B C1' DC 2 5 1.00 1 C 21.43 22.462 15.873 13.543 B N1 DC 2005 ATOM B N1 DC 2 5 1.00 1 N 22.04 21.428 15.137 12.931 B C2 DC 2005 ATOM B C2 DC 2 5 1.00 1 C 24.22 20.681 14.521 13.705 B O2 DC 2005 ATOM B O2 DC 2 5 1.00 1 O 24.07 21.315 15.142 11.578 B N3 DC 2005 ATOM B N3 DC 2 5 1.00 1 N 20.29 22.181 15.843 10.843 B C4 DC 2005 ATOM B C4 DC 2 5 1.00 1 C 24.17 21.980 15.780 9.515 B N4 DC 2005 ATOM B N4 DC 2 5 1.00 1 N 17.66 23.237 16.610 11.410 B C5 DC 2005 ATOM B C5 DC 2 5 1.00 1 C 20.41 23.319 16.591 12.758 B C6 DC 2005 ATOM B C6 DC 2 5 1.00 1 C 23.28 24.246 14.249 18.615 B P DG 2006 ATOM B P DG 2 6 1.00 1 P 24.50 23.467 13.573 19.592 B OP1 DG 2006 ATOM B OP1 DG 2 6 1.00 1 O 26.51 25.347 15.032 19.000 B OP2 DG 2006 ATOM B OP2 DG 2 6 1.00 1 O 22.76 24.712 13.181 17.519 B O5' DG 2006 ATOM B O5' DG 2 6 1.00 1 O 25.30 23.655 12.316 16.918 B C5' DG 2006 ATOM B C5' DG 2 6 1.00 1 C 22.55 24.499 11.197 16.176 B C4' DG 2006 ATOM B C4' DG 2 6 1.00 1 C 20.46 25.444 11.771 15.171 B O4' DG 2006 ATOM B O4' DG 2 6 1.00 1 O 23.66 25.299 10.200 17.089 B C3' DG 2006 ATOM B C3' DG 2 6 1.00 1 C 21.65 24.563 9.116 17.435 B O3' DG 2006 ATOM B O3' DG 2 6 1.00 1 O 22.02 26.500 9.905 16.167 B C2' DG 2006 ATOM B C2' DG 2 6 1.00 1 C 24.40 26.802 11.281 15.579 B C1' DG 2006 ATOM B C1' DG 2 6 1.00 1 C 22.03 27.301 12.415 16.357 B N9 DG 2006 ATOM B N9 DG 2 6 1.00 1 N 22.01 27.765 12.350 17.669 B C8 DG 2006 ATOM B C8 DG 2 6 1.00 1 C 24.53 28.150 13.487 18.138 B N7 DG 2006 ATOM B N7 DG 2 6 1.00 1 N 27.88 27.940 14.380 17.094 B C5 DG 2006 ATOM B C5 DG 2 6 1.00 1 C 27.82 28.167 15.785 16.988 B C6 DG 2006 ATOM B C6 DG 2 6 1.00 1 C 27.78 28.627 16.572 17.841 B O6 DG 2006 ATOM B O6 DG 2 6 1.00 1 O 27.74 27.808 16.296 15.734 B N1 DG 2006 ATOM B N1 DG 2 6 1.00 1 N 21.11 27.294 15.517 14.724 B C2 DG 2006 ATOM B C2 DG 2 6 1.00 1 C 21.02 26.988 16.146 13.556 B N2 DG 2006 ATOM B N2 DG 2 6 1.00 1 N 25.23 27.085 14.236 14.817 B N3 DG 2006 ATOM B N3 DG 2 6 1.00 1 N 21.79 27.420 13.715 16.009 B C4 DG 2006 ATOM B C4 DG 2 6 1.00 1 C 41.76 18.402 12.300 5.632 A CO CO 4002 HETATM C CO CO 3 0.50 1 CO 32.53 8.724 21.672 9.269 A C1 8AD 3014 HETATM A D C1 8AD 4 0.60 1 C 26.76 9.996 22.681 7.858 A C1 8AD 3014 HETATM B D C1 8AD 4 0.20 1 C 47.38 7.917 20.752 8.647 A C2 8AD 3014 HETATM A D C2 8AD 4 0.60 1 C 28.85 9.216 22.155 8.859 A C2 8AD 3014 HETATM B D C2 8AD 4 0.20 1 C 48.09 8.062 20.463 7.311 A C3 8AD 3014 HETATM A D C3 8AD 4 0.60 1 C 24.47 9.430 22.548 10.160 A C3 8AD 3014 HETATM B D C3 8AD 4 0.20 1 C 36.10 9.072 21.053 6.523 A C4 8AD 3014 HETATM A D C4 8AD 4 0.60 1 C 24.55 10.412 23.487 10.543 A C4 8AD 3014 HETATM B D C4 8AD 4 0.20 1 C 23.75 12.504 24.236 6.123 A C5 8AD 3014 HETATM A D C5 8AD 4 0.60 1 C 14.48 13.938 26.346 9.252 A C5 8AD 3014 HETATM B D C5 8AD 4 0.20 1 C 33.06 13.456 25.108 6.649 A C6 8AD 3014 HETATM A D C6 8AD 4 0.60 1 C 12.06 14.791 26.948 8.340 A C6 8AD 3014 HETATM B D C6 8AD 4 0.20 1 C 24.74 13.433 25.467 7.992 A C7 8AD 3014 HETATM A D C7 8AD 4 0.60 1 C 21.10 14.670 26.649 6.982 A C7 8AD 3014 HETATM B D C7 8AD 4 0.20 1 C 30.35 12.527 24.854 8.831 A C8 8AD 3014 HETATM A D C8 8AD 4 0.60 1 C 22.86 13.697 25.756 6.555 A C8 8AD 3014 HETATM B D C8 8AD 4 0.20 1 C 23.95 10.581 23.319 9.179 A C9 8AD 3014 HETATM A D C9 8AD 4 0.60 1 C 20.98 11.845 24.148 7.097 A C9 8AD 3014 HETATM B D C9 8AD 4 0.20 1 C 29.99 10.802 22.686 6.450 A N10 8AD 3014 HETATM A D N10 8AD 4 0.60 1 N 29.24 12.186 24.904 9.774 A N10 8AD 3014 HETATM B D N10 8AD 4 0.20 1 N 29.18 9.737 22.342 8.567 A C11 8AD 3014 HETATM A D C11 8AD 4 0.60 1 C 21.77 11.028 23.596 8.129 A C11 8AD 3014 HETATM B D C11 8AD 4 0.20 1 C 20.41 9.899 22.030 7.161 A C12 8AD 3014 HETATM A D C12 8AD 4 0.60 1 C 22.30 11.254 24.003 9.503 A C12 8AD 3014 HETATM B D C12 8AD 4 0.20 1 C 20.26 11.589 23.904 8.373 A C13 8AD 3014 HETATM A D C13 8AD 4 0.60 1 C 23.95 12.833 25.096 7.462 A C13 8AD 3014 HETATM B D C13 8AD 4 0.20 1 C 17.86 11.632 23.551 6.980 A C14 8AD 3014 HETATM A D C14 8AD 4 0.60 1 C 22.73 12.969 25.428 8.859 A C14 8AD 3014 HETATM B D C14 8AD 4 0.20 1 C 30.53 10.464 23.658 10.489 A N9 8AD 3014 HETATM A D N9 8AD 4 0.60 1 N 7.71 11.587 23.846 5.796 A N9 8AD 3014 HETATM B D N9 8AD 4 0.20 1 N 27.80 28.880 13.530 20.208 B CO CO 4001 HETATM E CO CO 3 0.50 1 CO 27.51 16.670 20.246 15.415 A O HOH 4006 HETATM F O HOH 5 1.00 1 O 34.92 15.432 19.499 17.911 A O HOH 4010 HETATM F O HOH 5 1.00 1 O 44.41 10.285 26.584 20.208 A O HOH 4016 HETATM F O HOH 5 0.50 1 O 43.09 15.690 21.390 19.827 A O HOH 4017 HETATM F O HOH 5 1.00 1 O 51.23 21.660 13.292 5.874 A O HOH 4018 HETATM F O HOH 5 0.50 1 O 27.81 15.489 26.584 0.000 B O HOH 4003 HETATM G O HOH 5 0.25 1 O 25.80 24.431 7.497 15.298 B O HOH 4004 HETATM G O HOH 5 1.00 1 O 46.50 21.015 21.261 1.999 B O HOH 4005 HETATM G O HOH 5 1.00 1 O 20.33 30.104 11.715 19.643 B O HOH 4007 HETATM G O HOH 5 0.50 1 O 37.11 23.951 17.525 8.014 B O HOH 4008 HETATM G O HOH 5 1.00 1 O 18.75 30.495 14.195 19.736 B O HOH 4009 HETATM G O HOH 5 0.50 1 O 39.40 23.453 9.021 20.163 B O HOH 4011 HETATM G O HOH 5 1.00 1 O 35.71 31.977 15.443 17.280 B O HOH 4012 HETATM G O HOH 5 1.00 1 O 41.50 32.838 11.839 19.171 B O HOH 4013 HETATM G O HOH 5 1.00 1 O 32.79 21.354 18.572 7.158 B O HOH 4014 HETATM G O HOH 5 1.00 1 O 29.97 15.048 25.680 1.778 B O HOH 4015 HETATM G O HOH 5 0.50 1 O 42.81 30.297 9.347 20.691 B O HOH 4019 HETATM G O HOH 5 1.00 1 O 34.48 22.393 20.175 5.368 B O HOH 4020 HETATM G O HOH 5 1.00 1 O 45.59 27.385 19.319 14.940 B O HOH 4021 HETATM G O HOH 5 1.00 1 O 0.4838 0.0950 -0.0719 0.5175 -0.0006 0.3731 A BR BRU 1003 A BR BRU 2 BR 0.5871 0.1529 0.0741 0.3982 0.0006 0.3439 B BR BRU 2003 B BR BRU 3 BR 0.5889 0.1416 0.0975 0.5953 -0.0001 0.4025 A CO CO 4002 C CO CO CO 0.2542 0.0000 -0.0081 0.4496 0.0000 0.3524 B CO CO 4001 E CO CO CO 0.034626 0.000000 0.000000 0.000000 0.018808 0.000000 0.000000 0.000000 0.024743 0.000000 0.000000 0.000000 Adams, A. Guss, J.M. Collyer, C.A. Denny, W.A. Wakelin, L.P.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 28.880 53.168 40.416 C20 H24 N4 O 336.431 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE non-polymer C9 H12 Br N2 O8 P 387.078 n 5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE DNA linking Co 2 58.933 COBALT (II) ION non-polymer C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Y 1 N C Y 2 N C Y 3 N C Y 4 N C Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N N Y 11 N C Y 12 N C Y 13 N C Y 14 N C N 15 N N N 16 N C N 17 N O N 18 N N N 19 N N N 20 N C N 21 N C N 22 N C N 23 N C N 24 N C N 25 N C N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 N C N 52 N N N 53 N C N 54 N C N 55 N C N 56 N O N 57 N O N 58 N BR N 59 R C N 60 N C N 61 S C N 62 R C N 63 N O N 64 N O N 65 N C N 66 N O N 67 N P N 68 N O N 69 N O N 70 N O N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N CO N 84 N O N 85 N P N 86 N O N 87 N O N 88 N O N 89 N C N 90 R C N 91 N O N 92 S C N 93 N O N 94 N C N 95 R C Y 96 N N Y 97 N C Y 98 N N Y 99 N C Y 100 N C N 101 N N Y 102 N N Y 103 N C Y 104 N N Y 105 N C N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N O N 121 N P N 122 N O N 123 N O N 124 N O N 125 N C N 126 R C N 127 N O N 128 S C N 129 N O N 130 N C N 131 R C N 132 N N N 133 N C N 134 N O N 135 N N N 136 N C N 137 N N N 138 N C N 139 N C N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N O N 155 N P N 156 N O N 157 N O N 158 N O N 159 N C N 160 R C N 161 N O N 162 S C N 163 N O N 164 N C N 165 R C Y 166 N N Y 167 N C Y 168 N N Y 169 N C N 170 N C N 171 N O N 172 N N N 173 N C N 174 N N N 175 N N Y 176 N C N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N O N 192 N H N 193 N H Y 1 N doub Y 2 N sing N 3 N sing Y 4 N sing N 5 N sing Y 6 N doub N 7 N sing Y 8 N sing N 9 N sing Y 10 N doub Y 11 N sing N 12 N sing Y 13 N sing N 14 N sing Y 15 N doub N 16 N sing Y 17 N sing N 18 N sing Y 19 N doub Y 20 N sing N 21 N sing Y 22 N doub Y 23 N sing Y 24 N sing Y 25 N doub N 26 N sing N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N doub N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing Y 109 N sing Y 110 N sing Y 111 N doub N 112 N sing Y 113 N sing Y 114 N sing Y 115 N doub N 116 N sing Y 117 N doub N 118 N sing N 119 N sing Y 120 N sing Y 121 N doub N 122 N sing Y 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing Y 182 N sing Y 183 N sing Y 184 N doub N 185 N sing Y 186 N sing N 187 N sing Y 188 N doub N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 28 4244 4253 10.1093/nar/28.21.4244 11058124 A novel form of intercalation involving four DNA duplexes in an acridine-4-carboxamide complex of d(CGTACG)(2). 2000 10.2210/pdb1fn1/pdb pdb_00001fn1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 100 1 CCD 1999-04-29 ADSC QUANTUM 1 MAD M x-ray 1 0.8920 1.0 14-BM-D APS 0.8920 SYNCHROTRON APS BEAMLINE 14-BM-D KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION 1584.906 DNA (5'-D(P*GP*(BRO)UP*AP*CP*G)-3') 1 syn polymer KNOWN TO BE A GOOD SEQUENCE FOR INTERCALATION 1874.087 DNA (5'-D(*CP*GP*(BRO)UP*AP*CP*G)-3') 1 syn polymer 58.933 COBALT (II) ION 2 syn non-polymer 336.431 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE 1 syn non-polymer 18.015 water 19 nat water no yes (DG)(BRU)(DA)(DC)(DG) GUACG A polydeoxyribonucleotide no yes (DC)(DG)(BRU)(DA)(DC)(DG) CGUACG B polydeoxyribonucleotide n n n n n n n n n n n 1 2.16 43.0 VAPOR DIFFUSION 6.5 MPD, sodium cacodylate, magnesium acetate, cobalt(II) chloride, spermine, pH 6.5, VAPOR DIFFUSION, temperature 285K 285 sodium cacodylate 1 magnesium acetate 1 CoCl2 1 spermine 1 MPD 1 MPD 2 -8.993 1 19 A 1002 B 2005 1.438 A_DG1002:DC2005_B 1 5.109 -0.422 0.011 -0.104 1.924 1 20 A 1003 B 2004 2.651 A_BRU1003:DA2004_B 2 -3.072 0.023 0.225 -0.122 2.674 1 20 A 1004 B 2003 -4.728 A_DA1004:BRU2003_B 3 3.639 0.159 -0.111 -0.139 13.466 1 19 A 1005 B 2002 3.992 A_DC1005:DG2002_B 4 -1.144 0.355 -0.166 -0.071 3.072 27.502 A A 1002 1003 7.023 B B 2005 2004 3.128 3.330 -0.148 -0.313 AA_DG1002BRU1003:DA2004DC2005_BB 1 -1.201 2.533 27.278 -1.437 0.031 3.117 37.804 A A 1003 1004 2.547 B B 2004 2003 3.160 1.648 -0.066 -0.502 AA_BRU1003DA1004:BRU2003DA2004_BB 2 3.535 -5.464 37.609 -0.980 0.540 2.906 30.121 A A 1004 1005 10.011 B B 2003 2002 3.156 5.173 1.099 -0.692 AA_DA1004DC1005:DG2002BRU2003_BB 3 -2.260 4.374 29.599 -2.320 -2.546 pdbx_struct_special_symmetry pdbx_unobs_or_zero_occ_atoms software struct_conn chem_comp_atom chem_comp_bond database_2 pdbx_unobs_or_zero_occ_atoms struct_conn struct_conn_type struct_site repository Initial release Version format compliance Version format compliance Advisory Data collection Derived calculations Refinement description Advisory Data collection Database references Derived calculations 1 0 2000-10-30 1 1 2007-10-16 1 2 2011-07-13 1 3 2019-07-24 1 4 2024-02-07 _software.name _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.conn_type_id _struct_conn.id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn_type.id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 9-amino-(N-(2-dimethylamino)butyl)acridine-4-carboxamide bound to d(CGTACG)2 5-F-9-amino-(N-(2-dimethylamino)ethyl-acridine-4-carboxamide bound to d(CGTACG)2 9-amino-(N-(2-dimethylamino)ethyl)acridine-4-carboxamide bound to d(CGTACG)2 6-Br-9-amino-(N-(2-dimethylamino)ethyl)acridine-4-carboxamide bound to d(CG(Br)ACG)2 RCSB Y RCSB 2000-08-19 REL REL CO COBALT (II) ION 8AD 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE HOH water CO 4002 3 CO CO 4002 A 8AD 3014 4 8AD 8AD 3014 A CO 4001 3 CO CO 4001 B HOH 4006 5 HOH HOH 4006 A HOH 4010 5 HOH HOH 4010 A HOH 4016 5 HOH HOH 4016 A HOH 4017 5 HOH HOH 4017 A HOH 4018 5 HOH HOH 4018 A HOH 4003 5 HOH HOH 4003 B HOH 4004 5 HOH HOH 4004 B HOH 4005 5 HOH HOH 4005 B HOH 4007 5 HOH HOH 4007 B HOH 4008 5 HOH HOH 4008 B HOH 4009 5 HOH HOH 4009 B HOH 4011 5 HOH HOH 4011 B HOH 4012 5 HOH HOH 4012 B HOH 4013 5 HOH HOH 4013 B HOH 4014 5 HOH HOH 4014 B HOH 4015 5 HOH HOH 4015 B HOH 4019 5 HOH HOH 4019 B HOH 4020 5 HOH HOH 4020 B HOH 4021 5 HOH HOH 4021 B G 1002 n 1 DG 1002 A U 1003 n 2 BRU 1003 A A 1004 n 3 DA 1004 A C 1005 n 4 DC 1005 A G 1006 n 5 DG 1006 A C 2001 n 1 DC 2001 B G 2002 n 2 DG 2002 B U 2003 n 3 BRU 2003 B A 2004 n 4 DA 2004 B C 2005 n 5 DC 2005 B G 2006 n 6 DG 2006 B 0.218 0.238 568 7.9 7161 author_defined_assembly 2 dimeric B DG 2006 B N7 DG 6 1_555 B CO 4001 E CO CO 1_555 B HOH 4007 G O HOH 1_555 85.9 B DG 2006 B N7 DG 6 1_555 B CO 4001 E CO CO 1_555 B HOH 4009 G O HOH 1_555 93.3 B HOH 4007 G O HOH 1_555 B CO 4001 E CO CO 1_555 B HOH 4009 G O HOH 1_555 75.3 A BRU 1003 A BRU 2 DU B BRU 2003 B BRU 3 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A 8AD 3014 D 8AD 1 B CO 4001 E CO 1 A HOH 4016 F HOH 1 A HOH 4018 F HOH 1 B HOH 4003 G HOH 1 B O5' DC 2001 B O5' DC 1 0 Y 1 A CD1 8AD 3014 D CD1 8AD 1 1 N 1 A OD1 8AD 3014 D OD1 8AD 1 1 N 1 A ND1 8AD 3014 D ND1 8AD 1 1 N 1 A ND2 8AD 3014 D ND2 8AD 1 1 N 1 A CD2 8AD 3014 D CD2 8AD 1 1 N 1 A CD3 8AD 3014 D CD3 8AD 1 1 N 1 A CD4 8AD 3014 D CD4 8AD 1 1 N 1 A CD5 8AD 3014 D CD5 8AD 1 1 N 1 A CD7 8AD 3014 D CD7 8AD 1 1 N 1 A CD8 8AD 3014 D CD8 8AD 1 1 N 1 -7.73 0.80 109.40 101.67 A A A O5' C5' C4' DG DG DG 1002 1002 1002 N 1 11.25 1.40 114.30 125.55 A A A N9 C1' C2' DG DG DG 1002 1002 1002 N 1 -9.12 0.70 108.00 98.88 A A A O4' C1' N9 DG DG DG 1002 1002 1002 N 1 8.61 1.20 119.70 128.31 A A A C3' O3' P BRU BRU DA 1003 1003 1004 Y 1 9.28 1.50 119.60 128.88 A A A OP1 P OP2 DA DA DA 1004 1004 1004 N 1 -6.75 0.80 109.40 102.65 A A A O5' C5' C4' DA DA DA 1004 1004 1004 N 1 -11.98 1.60 120.90 108.92 A A A P O5' C5' DA DA DA 1004 1004 1004 N 1 -5.06 0.70 108.00 102.94 A A A O4' C1' N9 DA DA DA 1004 1004 1004 N 1 10.55 1.50 119.60 130.15 A A A OP1 P OP2 DC DC DC 1005 1005 1005 N 1 -12.15 0.80 109.40 97.25 A A A O5' C5' C4' DC DC DC 1005 1005 1005 N 1 -6.74 1.00 110.10 103.36 A A A C1' O4' C4' DC DC DC 1005 1005 1005 N 1 -6.09 0.80 109.40 103.31 A A A O5' C5' C4' DG DG DG 1006 1006 1006 N 1 -6.04 0.70 108.00 101.96 A A A O4' C1' N9 DG DG DG 1006 1006 1006 N 1 -2.74 0.40 106.40 103.66 A A A C8 N9 C4 DG DG DG 1006 1006 1006 N 1 -4.05 0.60 126.00 121.95 A A A N3 C4 N9 DG DG DG 1006 1006 1006 N 1 -4.61 0.70 119.90 115.29 A A A N3 C2 N2 DG DG DG 1006 1006 1006 N 1 -7.45 0.80 109.40 101.95 B B B O5' C5' C4' DC DC DC 2001 2001 2001 N 1 -2.62 0.40 120.30 117.68 B B B C6 N1 C2 DC DC DC 2001 2001 2001 N 1 -4.10 0.60 118.90 114.80 B B B N1 C2 O2 DC DC DC 2001 2001 2001 N 1 -12.95 1.20 119.70 106.75 B B B C3' O3' P DC DC DG 2001 2001 2002 Y 1 -20.49 1.60 120.90 100.41 B B B P O5' C5' DG DG DG 2002 2002 2002 N 1 8.42 1.40 114.30 122.72 B B B N9 C1' C2' DG DG DG 2002 2002 2002 N 1 -6.12 0.70 108.00 101.88 B B B O4' C1' N9 DG DG DG 2002 2002 2002 N 1 -3.84 0.60 126.00 122.16 B B B N3 C4 N9 DG DG DG 2002 2002 2002 N 1 12.06 1.50 119.60 131.66 B B B OP1 P OP2 DA DA DA 2004 2004 2004 N 1 -6.63 0.80 109.40 102.77 B B B O5' C5' C4' DA DA DA 2004 2004 2004 N 1 -6.33 0.80 109.40 103.07 B B B O5' C5' C4' DC DC DC 2005 2005 2005 N 1 -6.66 0.80 109.40 102.74 B B B O5' C5' C4' DG DG DG 2006 2006 2006 N 1 9.85 1.40 114.30 124.15 B B B N9 C1' C2' DG DG DG 2006 2006 2006 N 1 -6.45 0.70 108.00 101.55 B B B O4' C1' N9 DG DG DG 2006 2006 2006 N 1 A A C5' C4' DG DG 1002 1002 0.063 0.007 1.512 1.575 N 1 A A O4' C1' DG DG 1002 1002 0.071 0.011 1.420 1.491 N 1 A A O3' C3' DG DG 1002 1002 -0.084 0.006 1.419 1.335 N 1 A A O3' P DG BRU 1002 1003 0.081 0.012 1.607 1.688 Y 1 A A C5' C4' DA DA 1004 1004 0.060 0.007 1.512 1.572 N 1 A A O3' C3' DA DA 1004 1004 -0.099 0.006 1.419 1.320 N 1 A A C5' C4' DC DC 1005 1005 0.073 0.007 1.512 1.585 N 1 A A O3' C3' DC DC 1005 1005 -0.109 0.006 1.419 1.310 N 1 A A C5' C4' DG DG 1006 1006 0.067 0.007 1.512 1.579 N 1 A A O4' C1' DG DG 1006 1006 0.067 0.011 1.420 1.487 N 1 A A O3' C3' DG DG 1006 1006 -0.089 0.006 1.419 1.330 N 1 B B C5' C4' DC DC 2001 2001 0.070 0.007 1.512 1.582 N 1 B B O4' C1' DC DC 2001 2001 0.076 0.011 1.420 1.496 N 1 B B O3' C3' DC DC 2001 2001 -0.098 0.006 1.419 1.321 N 1 B B C5' C4' DG DG 2002 2002 0.063 0.007 1.512 1.575 N 1 B B O4' C1' DG DG 2002 2002 0.078 0.011 1.420 1.498 N 1 B B O3' C3' DG DG 2002 2002 -0.123 0.006 1.419 1.296 N 1 B B O3' P BRU DA 2003 2004 0.083 0.012 1.607 1.690 Y 1 B B C5' C4' DA DA 2004 2004 0.067 0.007 1.512 1.579 N 1 B B O3' C3' DA DA 2004 2004 -0.078 0.006 1.419 1.341 N 1 B B P OP2 DC DC 2005 2005 -0.108 0.017 1.485 1.377 N 1 B B C5' C4' DC DC 2005 2005 0.066 0.007 1.512 1.578 N 1 B B O3' C3' DC DC 2005 2005 -0.065 0.006 1.419 1.354 N 1 B B C5' C4' DG DG 2006 2006 0.074 0.007 1.512 1.586 N 1 B B O4' C1' DG DG 2006 2006 0.080 0.011 1.420 1.500 N 1 B B O3' C3' DG DG 2006 2006 -0.064 0.006 1.419 1.355 N 0.24 0.23 0.23 0.23 1.60 40.0 1123 608 7785 7785 2727 7.8 100.0 Random 1 FREE R 0.0 0.0 MAD Shelx 2000 MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228 0 251.75 1.60 40.0 19 275 34 222 0 0.025 0.010 0.038 0.0145 0.000 0.010 0.010 0.000 0.075 0.000 20.3 1.60 40.0 1FN1 4345 4345 0.0 0.0 0.029 1 37.0 5.0 98.1 0.075 1.60 1.66 9.1 739 1.9 95.0 refinement SHELXL-97 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS CRYSTAL STRUCTURE OF 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CG(5BR)UACG)2 1 N N 2 N N 3 N N 4 N N 3 N N 5 N N 5 N N covale 1.688 both A DG 1002 A O3' DG 1 1_555 A BRU 1003 A P BRU 2 1_555 covale 1.643 both A BRU 1003 A O3' BRU 2 1_555 A DA 1004 A P DA 3 1_555 covale 1.663 both B DG 2002 B O3' DG 2 1_555 B BRU 2003 B P BRU 3 1_555 covale 1.690 both B BRU 2003 B O3' BRU 3 1_555 B DA 2004 B P DA 4 1_555 metalc 2.096 A DG 1002 A N7 DG 1 1_555 A CO 4002 C CO CO 1_555 metalc 2.195 B DG 2006 B N7 DG 6 1_555 B CO 4001 E CO CO 1_555 metalc 2.261 B CO 4001 E CO CO 1_555 B HOH 4007 G O HOH 1_555 metalc 1.809 B CO 4001 E CO CO 1_555 B HOH 4009 G O HOH 1_555 hydrog WATSON-CRICK A DG 1002 A N1 DG 1 1_555 B DC 2005 B N3 DC 5 1_555 hydrog WATSON-CRICK A DG 1002 A N2 DG 1 1_555 B DC 2005 B O2 DC 5 1_555 hydrog WATSON-CRICK A DG 1002 A O6 DG 1 1_555 B DC 2005 B N4 DC 5 1_555 hydrog WATSON-CRICK A BRU 1003 A N3 BRU 2 1_555 B DA 2004 B N1 DA 4 1_555 hydrog WATSON-CRICK A BRU 1003 A O4 BRU 2 1_555 B DA 2004 B N6 DA 4 1_555 hydrog WATSON-CRICK A DA 1004 A N1 DA 3 1_555 B BRU 2003 B N3 BRU 3 1_555 hydrog WATSON-CRICK A DA 1004 A N6 DA 3 1_555 B BRU 2003 B O4 BRU 3 1_555 hydrog WATSON-CRICK A DC 1005 A N3 DC 4 1_555 B DG 2002 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 1005 A N4 DC 4 1_555 B DG 2002 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 1005 A O2 DC 4 1_555 B DG 2002 B N2 DG 2 1_555 DNA 9-aminoacridine-4-carboamide, hexanucleotide, intercalation, quadruplex, DNA 1FN1 PDB 1 1FN1 1FN1 PDB 2 1FN1 1002 1006 1FN1 1002 1006 1FN1 A 1 1 5 2001 2006 1FN1 2001 2006 1FN1 B 2 1 6 BINDING SITE FOR RESIDUE CO B 4001 B CO 4001 Software 6 BINDING SITE FOR RESIDUE CO A 4002 A CO 4002 Software 1 BINDING SITE FOR RESIDUE 8AD A 3014 A 8AD 3014 Software 5 B DG 2006 B DG 6 6 1_555 B DG 2006 B DG 6 6 3_756 B HOH 4007 G HOH 6 1_555 B HOH 4007 G HOH 6 3_756 B HOH 4009 G HOH 6 3_756 B HOH 4009 G HOH 6 1_555 A DG 1002 A DG 1 1 1_555 A DC 1005 A DC 4 5 1_555 A DG 1006 A DG 5 5 1_555 B DC 2001 B DC 1 5 3_655 B DG 2002 B DG 2 5 2_665 B DG 2002 B DG 2 5 1_555 21 orthorhombic C 2 2 2