1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Markus, M.A.
Hinck, A.P.
Huang, S.
Draper, D.E.
Torchia, D.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
4
70
77
10.1038/nsb0197-70
8989327
High resolution solution structure of ribosomal protein L11-C76, a helical protein with a flexible loop that becomes structured upon binding to RNA.
1997
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
4
24
The RNA Binding Domain of Ribosomal Protein L11 is Structurally Similar to Homeodomains
1997
US
Biochemistry
BICHAW
0033
0006-2960
35
1581
Cooperative Interactions of RNA and Thiostrepton Antibiotic with Two Domains of Ribosomal Protein L11
1996
10.2210/pdb1fow/pdb
pdb_00001fow
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
BINDS SPECIFICALLY TO RNA
8152.554
L11-C76
CARBOXYL-TERMINAL DOMAIN OF PROTEIN L11, RESIDUES THR 59 TO ASP 133
INS(MET1)
1
man
polymer
no
no
MTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED
MTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Geobacillus
Escherichia
Escherichia coli
sample
BL21
1422
Geobacillus stearothermophilus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
DERIVED FROM PET11A
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1997-03-12
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1996-09-13
REL
REL
NO NOE VIOLATIONS OVER 0.3 A, NO ANGLE VIOLATIONS OVER 5 DEG
50
1
15N HSQC
13C HSQC
HNCACB
CBCA(CO)NH
HCACO
C(CO)NH
H(CCO)NH
HCCH-TOCSY
HMBC
HNHA
HNHB
HCACB-COSY
(13CO)SED CT HSQC
(15N) SED CT HSQC
(13C-13C) LRC
(13C-1H) LRC
6.10
298
K
DGSA
BRUNGER
refinement
X-PLOR
3.1
structure solution
X-PLOR
500
Bruker
AMX
500
Bruker
DMX
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
PHE
3
n
3
PHE
3
A
ILE
4
n
4
ILE
4
A
THR
5
n
5
THR
5
A
LYS
6
n
6
LYS
6
A
THR
7
n
7
THR
7
A
PRO
8
n
8
PRO
8
A
PRO
9
n
9
PRO
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
VAL
12
n
12
VAL
12
A
LEU
13
n
13
LEU
13
A
LEU
14
n
14
LEU
14
A
LYS
15
n
15
LYS
15
A
LYS
16
n
16
LYS
16
A
ALA
17
n
17
ALA
17
A
ALA
18
n
18
ALA
18
A
GLY
19
n
19
GLY
19
A
ILE
20
n
20
ILE
20
A
GLU
21
n
21
GLU
21
A
SER
22
n
22
SER
22
A
GLY
23
n
23
GLY
23
A
SER
24
n
24
SER
24
A
GLY
25
n
25
GLY
25
A
GLU
26
n
26
GLU
26
A
PRO
27
n
27
PRO
27
A
ASN
28
n
28
ASN
28
A
ARG
29
n
29
ARG
29
A
ASN
30
n
30
ASN
30
A
LYS
31
n
31
LYS
31
A
VAL
32
n
32
VAL
32
A
ALA
33
n
33
ALA
33
A
THR
34
n
34
THR
34
A
ILE
35
n
35
ILE
35
A
LYS
36
n
36
LYS
36
A
ARG
37
n
37
ARG
37
A
ASP
38
n
38
ASP
38
A
LYS
39
n
39
LYS
39
A
VAL
40
n
40
VAL
40
A
ARG
41
n
41
ARG
41
A
GLU
42
n
42
GLU
42
A
ILE
43
n
43
ILE
43
A
ALA
44
n
44
ALA
44
A
GLU
45
n
45
GLU
45
A
LEU
46
n
46
LEU
46
A
LYS
47
n
47
LYS
47
A
MET
48
n
48
MET
48
A
PRO
49
n
49
PRO
49
A
ASP
50
n
50
ASP
50
A
LEU
51
n
51
LEU
51
A
ASN
52
n
52
ASN
52
A
ALA
53
n
53
ALA
53
A
ALA
54
n
54
ALA
54
A
SER
55
n
55
SER
55
A
ILE
56
n
56
ILE
56
A
GLU
57
n
57
GLU
57
A
ALA
58
n
58
ALA
58
A
ALA
59
n
59
ALA
59
A
MET
60
n
60
MET
60
A
ARG
61
n
61
ARG
61
A
MET
62
n
62
MET
62
A
ILE
63
n
63
ILE
63
A
GLU
64
n
64
GLU
64
A
GLY
65
n
65
GLY
65
A
THR
66
n
66
THR
66
A
ALA
67
n
67
ALA
67
A
ARG
68
n
68
ARG
68
A
SER
69
n
69
SER
69
A
MET
70
n
70
MET
70
A
GLY
71
n
71
GLY
71
A
ILE
72
n
72
ILE
72
A
VAL
73
n
73
VAL
73
A
VAL
74
n
74
VAL
74
A
GLU
75
n
75
GLU
75
A
ASP
76
n
76
ASP
76
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
35
A
N
ILE
35
A
O
VAL
73
A
O
VAL
73
1
A
ARG
29
0.273
SIDE CHAIN
1
A
ARG
37
0.313
SIDE CHAIN
1
A
ARG
41
0.263
SIDE CHAIN
1
A
ARG
61
0.234
SIDE CHAIN
1
A
ARG
68
0.297
SIDE CHAIN
1
A
THR
2
77.50
-163.43
1
A
PHE
3
-93.49
52.49
1
A
ILE
4
-155.69
-143.64
1
A
THR
5
86.49
-31.10
1
A
LYS
6
-91.83
41.02
1
A
THR
7
-41.16
150.28
1
A
ILE
20
-113.24
56.24
1
A
GLU
21
-85.82
44.95
1
A
SER
22
61.62
60.24
1
A
SER
24
176.81
-31.07
1
A
PRO
27
-80.85
42.61
1
A
ASN
28
-42.92
-92.25
1
A
ASN
30
57.58
-167.33
1
A
LYS
31
70.12
86.80
1
A
ALA
33
47.56
83.24
1
A
LYS
36
-45.17
164.16
1
A
ASN
52
73.73
35.83
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF 50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE
1
Y
N
A
ALA
10
A
ALA
10
HELX_P
A
ALA
18
A
ALA
18
1
A1
9
A
ARG
37
A
ARG
37
HELX_P
A
LEU
46
A
LEU
46
1
A2
10
A
ILE
56
A
ILE
56
HELX_P
CSI RANGE: GLU 57 TO SER 69
A
THR
66
A
THR
66
1
A3
11
hydrog
A
VAL
40
A
N
VAL
40
1_555
A
LYS
36
A
O
LYS
36
1_555
hydrog
A
ARG
41
A
N
ARG
41
1_555
A
ARG
37
A
O
ARG
37
1_555
hydrog
A
ILE
43
A
N
ILE
43
1_555
A
LYS
39
A
O
LYS
39
1_555
hydrog
A
ALA
44
A
N
ALA
44
1_555
A
VAL
40
A
O
VAL
40
1_555
hydrog
A
GLU
45
A
N
GLU
45
1_555
A
ARG
41
A
O
ARG
41
1_555
hydrog
A
LEU
46
A
N
LEU
46
1_555
A
GLU
42
A
O
GLU
42
1_555
hydrog
A
LYS
47
A
N
LYS
47
1_555
A
ILE
43
A
O
ILE
43
1_555
hydrog
A
ALA
59
A
N
ALA
59
1_555
A
SER
55
A
O
SER
55
1_555
hydrog
A
MET
60
A
N
MET
60
1_555
A
ILE
56
A
O
ILE
56
1_555
hydrog
A
ILE
63
A
N
ILE
63
1_555
A
ALA
59
A
O
ALA
59
1_555
hydrog
A
GLU
64
A
N
GLU
64
1_555
A
MET
60
A
O
MET
60
1_555
hydrog
A
ALA
67
A
N
ALA
67
1_555
A
ILE
63
A
O
ILE
63
1_555
hydrog
A
ILE
35
A
N
ILE
35
1_555
A
VAL
73
A
O
VAL
73
1_555
hydrog
A
VAL
73
A
N
VAL
73
1_555
A
ALA
33
A
O
ALA
33
1_555
hydrog
A
GLU
75
A
N
GLU
75
1_555
A
ILE
35
A
O
ILE
35
1_555
RIBOSOMAL PROTEIN
RIBOSOMAL PROTEIN, RNA-BINDING DOMAIN, L11-C76, ALPHA-HELICAL PROTEIN, HOMEODOMAIN FOLD
RL11_BACST
UNP
1
1
P56210
MKLQIPAGKANPAPPVGPALGQAGVNIMAFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKAAGIESG
SGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED
59
133
1FOW
2
76
P56210
A
1
2
76
2
parallel
A
THR
34
A
THR
34
A
LYS
36
A
LYS
36
A
VAL
73
A
VAL
73
A
GLU
75
A
GLU
75
1
P 1