1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Hinck, A.P. Markus, M.A. Huang, S. Grzesiek, S. Kustanovich, I. Draper, D.E. Torchia, D.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 274 101 113 10.1006/jmbi.1997.1379 9398519 The RNA binding domain of ribosomal protein L11: three-dimensional structure of the RNA-bound form of the protein and its interaction with 23 S rRNA. 1997 10.2210/pdb1foy/pdb pdb_00001foy 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 STRUCTURE OF THE PROTEIN IN THIS ENTRY WAS DETERMINED AS A 1\:1 COMPLEX WITH ITS TARGET RNA OF 58 NUCLEOTIDES, BASES 1051 - 1108 OF THE E. COLI SEQUENCE 8152.554 RIBOSOMAL PROTEIN L11 C-TERMINAL DOMAIN, 75 RESIDUES F1M 1 man polymer no no MTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED MTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Geobacillus Escherichia Escherichia coli sample BL21 1422 Geobacillus stearothermophilus 469008 Escherichia coli BL21(DE3) BL21 (DE3) PET11A PLASMID BL21 database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1997-11-26 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1997-05-26 REL 50 1 6.1 320 K SUBSTRUCTURE DISTANCE GEOMETRY/ SIMULATED ANNEALING PROTOCOL SUBSTRUCTURE DISTANCE GEOMETRY/SIMULATING ANNEALING BRUNGER refinement X-PLOR 3.8 structure solution X-PLOR 3.8 500 Bruker DMX-500 600 Bruker DMX-600 MET 1 n 1 MET 1 A THR 2 n 2 THR 2 A PHE 3 n 3 PHE 3 A ILE 4 n 4 ILE 4 A THR 5 n 5 THR 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A PRO 8 n 8 PRO 8 A PRO 9 n 9 PRO 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A VAL 12 n 12 VAL 12 A LEU 13 n 13 LEU 13 A LEU 14 n 14 LEU 14 A LYS 15 n 15 LYS 15 A LYS 16 n 16 LYS 16 A ALA 17 n 17 ALA 17 A ALA 18 n 18 ALA 18 A GLY 19 n 19 GLY 19 A ILE 20 n 20 ILE 20 A GLU 21 n 21 GLU 21 A SER 22 n 22 SER 22 A GLY 23 n 23 GLY 23 A SER 24 n 24 SER 24 A GLY 25 n 25 GLY 25 A GLU 26 n 26 GLU 26 A PRO 27 n 27 PRO 27 A ASN 28 n 28 ASN 28 A ARG 29 n 29 ARG 29 A ASN 30 n 30 ASN 30 A LYS 31 n 31 LYS 31 A VAL 32 n 32 VAL 32 A ALA 33 n 33 ALA 33 A THR 34 n 34 THR 34 A ILE 35 n 35 ILE 35 A LYS 36 n 36 LYS 36 A ARG 37 n 37 ARG 37 A ASP 38 n 38 ASP 38 A LYS 39 n 39 LYS 39 A VAL 40 n 40 VAL 40 A ARG 41 n 41 ARG 41 A GLU 42 n 42 GLU 42 A ILE 43 n 43 ILE 43 A ALA 44 n 44 ALA 44 A GLU 45 n 45 GLU 45 A LEU 46 n 46 LEU 46 A LYS 47 n 47 LYS 47 A MET 48 n 48 MET 48 A PRO 49 n 49 PRO 49 A ASP 50 n 50 ASP 50 A LEU 51 n 51 LEU 51 A ASN 52 n 52 ASN 52 A ALA 53 n 53 ALA 53 A ALA 54 n 54 ALA 54 A SER 55 n 55 SER 55 A ILE 56 n 56 ILE 56 A GLU 57 n 57 GLU 57 A ALA 58 n 58 ALA 58 A ALA 59 n 59 ALA 59 A MET 60 n 60 MET 60 A ARG 61 n 61 ARG 61 A MET 62 n 62 MET 62 A ILE 63 n 63 ILE 63 A GLU 64 n 64 GLU 64 A GLY 65 n 65 GLY 65 A THR 66 n 66 THR 66 A ALA 67 n 67 ALA 67 A ARG 68 n 68 ARG 68 A SER 69 n 69 SER 69 A MET 70 n 70 MET 70 A GLY 71 n 71 GLY 71 A ILE 72 n 72 ILE 72 A VAL 73 n 73 VAL 73 A VAL 74 n 74 VAL 74 A GLU 75 n 75 GLU 75 A ASP 76 n 76 ASP 76 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O ALA 33 A O ALA 33 A N VAL 73 A N VAL 73 1 A A O H LEU GLY 14 19 1.58 1 A A O H ALA LEU 10 14 1.58 1 A A O H MET GLU 60 64 1.59 1 A A O H ALA LYS 11 15 1.60 1 A ARG 29 0.193 SIDE CHAIN 1 A ARG 37 0.242 SIDE CHAIN 1 A ARG 41 0.292 SIDE CHAIN 1 A ARG 61 0.316 SIDE CHAIN 1 A ARG 68 0.284 SIDE CHAIN 1 A ILE 4 46.63 28.71 1 A ALA 11 -43.20 -70.46 1 A LYS 16 -73.02 -74.66 1 A ILE 20 43.78 -169.83 1 A SER 22 163.53 52.64 1 A SER 24 -91.26 -78.51 1 A PRO 27 -76.33 -162.06 1 A ASN 28 -163.14 -58.15 1 A ASN 30 76.34 167.65 1 A LYS 31 76.94 94.51 1 A ASP 50 160.95 -24.40 1 A ALA 53 -43.90 161.49 1 A SER 55 163.79 163.67 1 A ILE 56 -43.75 -73.79 1 A MET 70 -120.93 -77.55 model building X-PLOR 3.8 refinement X-PLOR 3.8 phasing X-PLOR 3.8 THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11: THREE-DIMENSIONAL STRUCTURE OF THE RNA-BOUND FORM OF THE PROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE 1 Y N A ALA 10 A ALA 10 HELX_P A ALA 17 A ALA 17 1 1 8 A ARG 37 A ARG 37 HELX_P A LEU 46 A LEU 46 1 2 10 A ILE 56 A ILE 56 HELX_P A ALA 67 A ALA 67 1 3 12 RIBOSOME RIBOSOME, PROTEIN/RNA, THIOSTREPTON RL11_BACST UNP 1 1 P56210 MKLQIPAGKANPAPPVGPALGQAGVNIMAFCKEFNARTADQAGLIIPVEITVFEDRSFTFITKTPPAAVLLKKAAGIESG SGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVED 59 133 1FOY 2 76 P56210 A 1 2 76 2 parallel A ALA 33 A ALA 33 A LYS 36 A LYS 36 A ILE 72 A ILE 72 A GLU 75 A GLU 75 1 P 1