0.015840 0.009145 0.000000 0.000000 0.018291 0.000000 0.000000 0.000000 0.012031 0.00000 0.00000 0.00000 Dohnalek, J. Hasek, J. Duskova, J. Petrokova, H. Hradilek, M. Soucek, M. Konvalinka, J. Brynda, J. Sedlacek, J. Fabry, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 63.130 63.130 83.120 C38 H49 N5 O8 703.824 N-{(2S,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 N O N 4 N C N 5 N C N 6 N C N 7 N C N 8 N N N 9 S C N 10 S C N 11 N O N 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C N 19 N C N 20 N N N 21 S C N 22 N C N 23 N O N 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C Y 29 N C Y 30 N C N 31 N N N 32 S C N 33 N C N 34 N O N 35 N C N 36 N C N 37 N C N 38 N O N 39 N O N 40 N N N 41 S C N 42 N C N 43 N O N 44 N C Y 45 N C Y 46 N C Y 47 N C Y 48 N C Y 49 N C Y 50 N C N 51 N N N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N N N 102 S C N 103 N C N 104 N O N 105 N C N 106 N O N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N N N 115 S C N 116 N C N 117 N O N 118 N C N 119 N C N 120 N C N 121 N N N 122 N C N 123 N N N 124 N N N 125 N O N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 S C N 143 N C N 144 N O N 145 N C N 146 N C N 147 N O N 148 N N N 149 N O N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C N 163 N C N 164 N O N 165 N O N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N N N 175 R C N 176 N C N 177 N O N 178 N C N 179 N S N 180 N O N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N O N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C N 213 N C N 214 N C N 215 N O N 216 N O N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 N C N 229 N C N 230 N O N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N C Y 242 N C Y 243 N N Y 244 N C Y 245 N C Y 246 N N N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N O N 259 N H N 260 N H N 261 N N N 262 S C N 263 N C N 264 N O N 265 S C N 266 N C N 267 N C N 268 N C N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C N 288 N C N 289 N C N 290 N C N 291 N O N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N C N 312 N C N 313 N N N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N C N 336 N S N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N N N 351 S C N 352 N C N 353 N O N 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C N 395 N O N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 R C N 409 N O N 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N N N 422 S C N 423 N C N 424 N O N 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N N Y 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C N 435 N O N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 N C Y 453 N C Y 454 N C Y 455 N C Y 456 N C Y 457 N C Y 458 N C N 459 N O N 460 N O N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N N N 473 S C N 474 N C N 475 N O N 476 N C N 477 N C N 478 N C N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing Y 28 N doub Y 29 N sing Y 30 N sing N 31 N sing Y 32 N doub N 33 N sing Y 34 N doub N 35 N sing Y 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N doub N 47 N sing N 48 N sing N 49 N sing Y 50 N doub Y 51 N sing Y 52 N sing N 53 N sing Y 54 N doub N 55 N sing Y 56 N doub N 57 N sing Y 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing Y 85 N doub Y 86 N sing Y 87 N sing N 88 N sing Y 89 N doub N 90 N sing Y 91 N doub N 92 N sing Y 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing Y 242 N sing Y 243 N doub Y 244 N doub N 245 N sing Y 246 N sing N 247 N sing Y 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N doub N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing Y 350 N doub Y 351 N sing Y 352 N sing N 353 N sing Y 354 N doub N 355 N sing Y 356 N doub N 357 N sing Y 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N doub N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing Y 419 N doub Y 420 N sing Y 421 N sing N 422 N sing Y 423 N doub Y 424 N sing Y 425 N sing N 426 N sing Y 427 N sing Y 428 N doub N 429 N sing Y 430 N doub N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N sing Y 447 N doub Y 448 N sing Y 449 N sing N 450 N sing Y 451 N doub N 452 N sing Y 453 N doub N 454 N sing Y 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 57 472 476 10.1107/S0907444900018928 11223536 A distinct binding mode of a hydroxyethylamine isostere inhibitor of HIV-1 protease. 2001 10.2210/pdb1fqx/pdb pdb_00001fqx 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.0 1 IMAGE PLATE 1996-05-01 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 10803.756 PROTEASE RETROPEPSIN 3.4.23.16 2 man polymer 703.824 N-{(2S,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide 1 syn non-polymer 18.015 water 28 nat water HIV-1 PROTEASE E.C.3.4.23.16 no no PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 1 2.15 42.66 VAPOR DIFFUSION, HANGING DROP 5.8 ammonium acetate, sodium Citrate, PEG 4000, pH 5.8. VAPOR DIFFUSION, HANGING DROP at 291 K 291 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Other Data collection Database references Derived calculations 1 0 2001-03-14 1 1 2007-10-16 1 2 2011-07-13 1 3 2012-12-12 1 4 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2000-09-07 REL REL 0ZT N-{(2S,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide HOH water Inhibitor BOC-PHE-PSI[S-CH(OH)CH2NH]-PHE-GLU-PHE-NH2 Peptide-like BOC 201 2 0ZT 0ZT 201 A HOH 301 3 HOH HOH 301 A HOH 303 3 HOH HOH 303 A HOH 305 3 HOH HOH 305 A HOH 307 3 HOH HOH 307 A HOH 308 3 HOH HOH 308 A HOH 311 3 HOH HOH 311 A HOH 312 3 HOH HOH 312 A HOH 313 3 HOH HOH 313 A HOH 314 3 HOH HOH 314 A HOH 316 3 HOH HOH 316 A HOH 318 3 HOH HOH 318 A HOH 319 3 HOH HOH 319 A HOH 321 3 HOH HOH 321 A HOH 322 3 HOH HOH 322 A HOH 323 3 HOH HOH 323 A HOH 325 3 HOH HOH 325 A HOH 326 3 HOH HOH 326 A HOH 302 3 HOH HOH 302 B HOH 304 3 HOH HOH 304 B HOH 306 3 HOH HOH 306 B HOH 309 3 HOH HOH 309 B HOH 310 3 HOH HOH 310 B HOH 315 3 HOH HOH 315 B HOH 317 3 HOH HOH 317 B HOH 320 3 HOH HOH 320 B HOH 324 3 HOH HOH 324 B HOH 327 3 HOH HOH 327 B HOH 328 3 HOH HOH 328 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B GLN 7 n 7 GLN 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B LEU 33 n 33 LEU 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B SER 37 n 37 SER 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 5570 -28 9250 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 3 A N ILE 3 B O LEU 97 B O LEU 97 B N ASN 98 B N ASN 98 A O THR 96 A O THR 96 A O LEU 97 A O LEU 97 B N ILE 3 B N ILE 3 A O VAL 11 A O VAL 11 A N ALA 22 A N ALA 22 A O LEU 23 A O LEU 23 A N ILE 85 A N ILE 85 A N THR 31 A N THR 31 A O THR 74 A O THR 74 A O VAL 77 A O VAL 77 A N ARG 57 A N ARG 57 A O GLU 65 A O GLU 65 A N LYS 14 A N LYS 14 A N ILE 15 A N ILE 15 A O GLN 18 A O GLN 18 A N THR 31 A N THR 31 A O THR 74 A O THR 74 A O VAL 77 A O VAL 77 A N ARG 57 A N ARG 57 A N GLN 58 A N GLN 58 A O LYS 43 A O LYS 43 B O VAL 11 B O VAL 11 B N ALA 22 B N ALA 22 B O LEU 23 B O LEU 23 B N ILE 85 B N ILE 85 B N THR 31 B N THR 31 B O THR 74 B O THR 74 B O VAL 77 B O VAL 77 B N ARG 57 B N ARG 57 B O GLU 65 B O GLU 65 B N LYS 14 B N LYS 14 B N ILE 15 B N ILE 15 B O GLN 18 B O GLN 18 B N THR 31 B N THR 31 B O THR 74 B O THR 74 B O VAL 77 B O VAL 77 B N ARG 57 B N ARG 57 B N GLN 58 B N GLN 58 B O LYS 43 B O LYS 43 1 A CG ARG 41 A CG ARG 41 0 Y 1 A CD ARG 41 A CD ARG 41 0 Y 1 A NE ARG 41 A NE ARG 41 0 Y 1 A CZ ARG 41 A CZ ARG 41 0 Y 1 A NH1 ARG 41 A NH1 ARG 41 0 Y 1 A NH2 ARG 41 A NH2 ARG 41 0 Y 1 A CG LYS 55 A CG LYS 55 0 Y 1 A CD LYS 55 A CD LYS 55 0 Y 1 A CE LYS 55 A CE LYS 55 0 Y 1 A NZ LYS 55 A NZ LYS 55 0 Y 1 B CG ARG 41 B CG ARG 41 0 Y 1 B CD ARG 41 B CD ARG 41 0 Y 1 B NE ARG 41 B NE ARG 41 0 Y 1 B CZ ARG 41 B CZ ARG 41 0 Y 1 B NH1 ARG 41 B NH1 ARG 41 0 Y 1 B NH2 ARG 41 B NH2 ARG 41 0 Y 1 B CG LYS 55 B CG LYS 55 0 Y 1 B CD LYS 55 B CD LYS 55 0 Y 1 B CE LYS 55 B CE LYS 55 0 Y 1 B NZ LYS 55 B NZ LYS 55 0 Y 1 A LYS 20 -127.33 -163.59 1 A GLU 34 -57.84 -178.13 1 A GLN 61 34.70 68.56 1 A CYS 67 28.56 56.13 1 B LYS 20 -128.19 -164.58 1 B GLU 34 -57.32 -177.79 1 B GLN 61 34.08 68.23 1 B CYS 67 28.03 61.98 Used weighting scheme 1/(sigma^2 + 0.001|F|^2) 0.18 0.18 0.18 3.1 26.0 3449 3263 1 NONE 0.0 0.0 MOLECULAR REPLACEMENT Engh & Huber 3.1 26.0 28 1595 51 0 1516 0.08 1.37 43.0 3.1 26.0 1FQX 3263 3263 0.0 0.0 0.177 1 5.8 4.6 94.6 0.46 3.1 3.24 311 1 96.0 phasing AMoRE refinement CNS data reduction DENZO data scaling SCALEPACK CRYSTAL STRUCTURE OF THE COMPLEX OF HIV-1 PROTEASE WITH A PEPTIDOMIMETIC INHIBITOR 1 N N 1 N N 2 N N 3 N N 3 N N A GLY 86 A GLY 86 HELX_P A THR 91 A THR 91 1 1 6 B GLY 86 B GLY 86 HELX_P B THR 91 B THR 91 1 2 6 HYDROLASE/HYDROLASE inhibitor ASPARTYL PROTEASE, PROTEASE, HIV, PEPTIDOMIMETIC, INHIBITOR, DRUG DESIGN, HYDROXYETHYLAMINE ISOSTERE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX POL_HV1BR UNP 1 69 P03367 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 69 167 1FQX 1 99 P03367 A 1 1 99 69 167 1FQX 1 99 P03367 B 1 1 99 4 3 5 4 3 5 4 anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A GLN 2 A GLN 2 A ILE 3 A ILE 3 B THR 96 B THR 96 B ASN 98 B ASN 98 A THR 96 A THR 96 A ASN 98 A ASN 98 B GLN 2 B GLN 2 B ILE 3 B ILE 3 A LEU 10 A LEU 10 A VAL 11 A VAL 11 A ALA 22 A ALA 22 A LEU 24 A LEU 24 A ILE 84 A ILE 84 A ILE 85 A ILE 85 A THR 31 A THR 31 A LEU 33 A LEU 33 A HIS 69 A HIS 69 A VAL 77 A VAL 77 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A ILE 13 A ILE 13 A ILE 15 A ILE 15 A GLN 18 A GLN 18 A LEU 19 A LEU 19 A THR 31 A THR 31 A LEU 33 A LEU 33 A HIS 69 A HIS 69 A VAL 77 A VAL 77 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A LYS 43 A LYS 43 A GLY 49 A GLY 49 B LEU 10 B LEU 10 B VAL 11 B VAL 11 B ALA 22 B ALA 22 B LEU 24 B LEU 24 B ILE 84 B ILE 84 B ILE 85 B ILE 85 B THR 31 B THR 31 B LEU 33 B LEU 33 B HIS 69 B HIS 69 B VAL 77 B VAL 77 B GLY 52 B GLY 52 B ILE 66 B ILE 66 B ILE 13 B ILE 13 B ILE 15 B ILE 15 B GLN 18 B GLN 18 B LEU 19 B LEU 19 B THR 31 B THR 31 B LEU 33 B LEU 33 B HIS 69 B HIS 69 B VAL 77 B VAL 77 B GLY 52 B GLY 52 B ILE 66 B ILE 66 B LYS 43 B LYS 43 B GLY 49 B GLY 49 BINDING SITE FOR RESIDUE 0ZT A 201 A 0ZT 201 Software 35 A LEU 23 A LEU 23 35 1_555 A ASP 25 A ASP 25 35 1_555 A GLY 27 A GLY 27 35 1_555 A ALA 28 A ALA 28 35 1_555 A ASP 29 A ASP 29 35 1_555 A ASP 30 A ASP 30 35 1_555 A VAL 32 A VAL 32 35 1_555 A ILE 47 A ILE 47 35 1_555 A GLY 48 A GLY 48 35 1_555 A GLY 49 A GLY 49 35 1_555 A ILE 50 A ILE 50 35 1_555 A PRO 81 A PRO 81 35 1_555 A VAL 82 A VAL 82 35 1_555 A ILE 84 A ILE 84 35 1_555 A HOH 301 D HOH 35 1_555 A HOH 305 D HOH 35 1_555 A HOH 307 D HOH 35 1_555 A HOH 313 D HOH 35 6_555 A HOH 314 D HOH 35 1_555 A HOH 314 D HOH 35 5_554 A HOH 325 D HOH 35 5_554 B LEU 23 B LEU 23 35 1_555 B ASP 25 B ASP 25 35 1_555 B GLY 27 B GLY 27 35 1_555 B ALA 28 B ALA 28 35 1_555 B ASP 29 B ASP 29 35 1_555 B ASP 30 B ASP 30 35 1_555 B VAL 32 B VAL 32 35 1_555 B ILE 47 B ILE 47 35 1_555 B GLY 48 B GLY 48 35 1_555 B GLY 49 B GLY 49 35 1_555 B ILE 50 B ILE 50 35 1_555 B PRO 81 B PRO 81 35 1_555 B VAL 82 B VAL 82 35 1_555 B ILE 84 B ILE 84 35 1_555 169 hexagonal P 61