0.003786
0.002186
0.000000
0.000000
0.004372
0.000000
0.000000
0.000000
0.001529
0.000000
0.000000
0.000000
Axblom, C.
Tars, K.
Fridborg, K.
Bundule, M.
Orna, L.
Liljas, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
540
90.00
90.00
120.00
264.100
264.100
654.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Virology
VIRLAX
0922
0042-6822
249
80
88
10.1006/viro.1998.9279
9740779
Structure of phage fr capsids with a deletion in the FG loop: implications for viral assembly.
1998
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
244
279
Crystal Structure of Bacteriophage Fr Capsids at 3.5 A Resolution
1994
10.2210/pdb1fr5/pdb
pdb_00001fr5
1.000000
0.000000
0.000000
0.000000
0.934172
0.356823
0.000000
-0.356823
0.934172
0.000000
0.000000
0.000000
293
1
IMAGE PLATE
1997-01-21
MARRESEARCH
M
x-ray
1
0.87
1.0
PX9.6
SRS
0.87
SYNCHROTRON
SRS BEAMLINE PX9.6
13333.982
BACTERIOPHAGE FR CAPSID
DEL(70-73)
3
man
polymer
no
no
ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATGVELPVAAWRS
YMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY
ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATGVELPVAAWRS
YMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Levivirus
Enterobacteria phage MS2
Escherichia
sample
12017
Enterobacteria phage fr
CYTOPLASM
562
Escherichia coli
RR1
PLASMID
PFRS5
1
atom_site
cell
database_2
database_PDB_matrix
pdbx_database_remark
pdbx_database_status
pdbx_struct_oper_list
pdbx_validate_rmsd_angle
pdbx_validate_torsion
struct_ncs_oper
struct_ref_seq_dif
pdbx_initial_refinement_model
repository
Initial release
Coordinates and associated matrices have been transformed from the icosahedral point symmetry frame to the crystallographic frame
repository
Remediation
Version format compliance
Version format compliance
Advisory
Atomic model
Data collection
Database references
Derived calculations
Other
Refinement description
Refinement description
1
0
1999-01-13
1
1
2008-03-24
1
2
2011-07-13
2
0
2023-04-19
2
1
2023-08-09
_atom_site.Cartn_y
_atom_site.Cartn_z
_cell.Z_PDB
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_database_PDB_matrix.origx[2][2]
_database_PDB_matrix.origx[2][3]
_database_PDB_matrix.origx[3][2]
_database_PDB_matrix.origx[3][3]
_pdbx_database_status.process_site
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.type
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
_struct_ref_seq_dif.details
Y
BNL
1998-07-22
REL
REL
1FRS
PDB ENTRY 1FRS
PDB
experimental model
532
I
ALA
1
n
1
ALA
1
A
SER
2
n
2
SER
2
A
ASN
3
n
3
ASN
3
A
PHE
4
n
4
PHE
4
A
GLU
5
n
5
GLU
5
A
GLU
6
n
6
GLU
6
A
PHE
7
n
7
PHE
7
A
VAL
8
n
8
VAL
8
A
LEU
9
n
9
LEU
9
A
VAL
10
n
10
VAL
10
A
ASP
11
n
11
ASP
11
A
ASN
12
n
12
ASN
12
A
GLY
13
n
13
GLY
13
A
GLY
14
n
14
GLY
14
A
THR
15
n
15
THR
15
A
GLY
16
n
16
GLY
16
A
ASP
17
n
17
ASP
17
A
VAL
18
n
18
VAL
18
A
LYS
19
n
19
LYS
19
A
VAL
20
n
20
VAL
20
A
ALA
21
n
21
ALA
21
A
PRO
22
n
22
PRO
22
A
SER
23
n
23
SER
23
A
ASN
24
n
24
ASN
24
A
PHE
25
n
25
PHE
25
A
ALA
26
n
26
ALA
26
A
ASN
27
n
27
ASN
27
A
GLY
28
n
28
GLY
28
A
VAL
29
n
29
VAL
29
A
ALA
30
n
30
ALA
30
A
GLU
31
n
31
GLU
31
A
TRP
32
n
32
TRP
32
A
ILE
33
n
33
ILE
33
A
SER
34
n
34
SER
34
A
SER
35
n
35
SER
35
A
ASN
36
n
36
ASN
36
A
SER
37
n
37
SER
37
A
ARG
38
n
38
ARG
38
A
SER
39
n
39
SER
39
A
GLN
40
n
40
GLN
40
A
ALA
41
n
41
ALA
41
A
TYR
42
n
42
TYR
42
A
LYS
43
n
43
LYS
43
A
VAL
44
n
44
VAL
44
A
THR
45
n
45
THR
45
A
CYS
46
n
46
CYS
46
A
SER
47
n
47
SER
47
A
VAL
48
n
48
VAL
48
A
ARG
49
n
49
ARG
49
A
GLN
50
n
50
GLN
50
A
SER
51
n
51
SER
51
A
SER
52
n
52
SER
52
A
ALA
53
n
53
ALA
53
A
ASN
54
n
54
ASN
54
A
ASN
55
n
55
ASN
55
A
ARG
56
n
56
ARG
56
A
LYS
57
n
57
LYS
57
A
TYR
58
n
58
TYR
58
A
THR
59
n
59
THR
59
A
VAL
60
n
60
VAL
60
A
LYS
61
n
61
LYS
61
A
VAL
62
n
62
VAL
62
A
GLU
63
n
63
GLU
63
A
VAL
64
n
64
VAL
64
A
PRO
65
n
65
PRO
65
A
LYS
66
n
66
LYS
66
A
VAL
67
n
67
VAL
67
A
ALA
68
n
68
ALA
68
A
THR
69
n
69
THR
69
A
GLY
74
n
70
GLY
74
A
VAL
75
n
71
VAL
75
A
GLU
76
n
72
GLU
76
A
LEU
77
n
73
LEU
77
A
PRO
78
n
74
PRO
78
A
VAL
79
n
75
VAL
79
A
ALA
80
n
76
ALA
80
A
ALA
81
n
77
ALA
81
A
TRP
82
n
78
TRP
82
A
ARG
83
n
79
ARG
83
A
SER
84
n
80
SER
84
A
TYR
85
n
81
TYR
85
A
MET
86
n
82
MET
86
A
ASN
87
n
83
ASN
87
A
MET
88
n
84
MET
88
A
GLU
89
n
85
GLU
89
A
LEU
90
n
86
LEU
90
A
THR
91
n
87
THR
91
A
ILE
92
n
88
ILE
92
A
PRO
93
n
89
PRO
93
A
VAL
94
n
90
VAL
94
A
PHE
95
n
91
PHE
95
A
ALA
96
n
92
ALA
96
A
THR
97
n
93
THR
97
A
ASN
98
n
94
ASN
98
A
ASP
99
n
95
ASP
99
A
ASP
100
n
96
ASP
100
A
CYS
101
n
97
CYS
101
A
ALA
102
n
98
ALA
102
A
LEU
103
n
99
LEU
103
A
ILE
104
n
100
ILE
104
A
VAL
105
n
101
VAL
105
A
LYS
106
n
102
LYS
106
A
ALA
107
n
103
ALA
107
A
LEU
108
n
104
LEU
108
A
GLN
109
n
105
GLN
109
A
GLY
110
n
106
GLY
110
A
THR
111
n
107
THR
111
A
PHE
112
n
108
PHE
112
A
LYS
113
n
109
LYS
113
A
THR
114
n
110
THR
114
A
GLY
115
n
111
GLY
115
A
ASN
116
n
112
ASN
116
A
PRO
117
n
113
PRO
117
A
ILE
118
n
114
ILE
118
A
ALA
119
n
115
ALA
119
A
THR
120
n
116
THR
120
A
ALA
121
n
117
ALA
121
A
ILE
122
n
118
ILE
122
A
ALA
123
n
119
ALA
123
A
ALA
124
n
120
ALA
124
A
ASN
125
n
121
ASN
125
A
SER
126
n
122
SER
126
A
GLY
127
n
123
GLY
127
A
ILE
128
n
124
ILE
128
A
TYR
129
n
125
TYR
129
A
ALA
1
n
1
ALA
1
B
SER
2
n
2
SER
2
B
ASN
3
n
3
ASN
3
B
PHE
4
n
4
PHE
4
B
GLU
5
n
5
GLU
5
B
GLU
6
n
6
GLU
6
B
PHE
7
n
7
PHE
7
B
VAL
8
n
8
VAL
8
B
LEU
9
n
9
LEU
9
B
VAL
10
n
10
VAL
10
B
ASP
11
n
11
ASP
11
B
ASN
12
n
12
ASN
12
B
GLY
13
n
13
GLY
13
B
GLY
14
n
14
GLY
14
B
THR
15
n
15
THR
15
B
GLY
16
n
16
GLY
16
B
ASP
17
n
17
ASP
17
B
VAL
18
n
18
VAL
18
B
LYS
19
n
19
LYS
19
B
VAL
20
n
20
VAL
20
B
ALA
21
n
21
ALA
21
B
PRO
22
n
22
PRO
22
B
SER
23
n
23
SER
23
B
ASN
24
n
24
ASN
24
B
PHE
25
n
25
PHE
25
B
ALA
26
n
26
ALA
26
B
ASN
27
n
27
ASN
27
B
GLY
28
n
28
GLY
28
B
VAL
29
n
29
VAL
29
B
ALA
30
n
30
ALA
30
B
GLU
31
n
31
GLU
31
B
TRP
32
n
32
TRP
32
B
ILE
33
n
33
ILE
33
B
SER
34
n
34
SER
34
B
SER
35
n
35
SER
35
B
ASN
36
n
36
ASN
36
B
SER
37
n
37
SER
37
B
ARG
38
n
38
ARG
38
B
SER
39
n
39
SER
39
B
GLN
40
n
40
GLN
40
B
ALA
41
n
41
ALA
41
B
TYR
42
n
42
TYR
42
B
LYS
43
n
43
LYS
43
B
VAL
44
n
44
VAL
44
B
THR
45
n
45
THR
45
B
CYS
46
n
46
CYS
46
B
SER
47
n
47
SER
47
B
VAL
48
n
48
VAL
48
B
ARG
49
n
49
ARG
49
B
GLN
50
n
50
GLN
50
B
SER
51
n
51
SER
51
B
SER
52
n
52
SER
52
B
ALA
53
n
53
ALA
53
B
ASN
54
n
54
ASN
54
B
ASN
55
n
55
ASN
55
B
ARG
56
n
56
ARG
56
B
LYS
57
n
57
LYS
57
B
TYR
58
n
58
TYR
58
B
THR
59
n
59
THR
59
B
VAL
60
n
60
VAL
60
B
LYS
61
n
61
LYS
61
B
VAL
62
n
62
VAL
62
B
GLU
63
n
63
GLU
63
B
VAL
64
n
64
VAL
64
B
PRO
65
n
65
PRO
65
B
LYS
66
n
66
LYS
66
B
VAL
67
n
67
VAL
67
B
ALA
68
n
68
ALA
68
B
n
69
73
B
n
70
74
B
n
71
75
B
n
72
76
B
n
73
77
B
n
74
78
B
n
75
79
B
n
76
80
B
n
77
81
B
TRP
82
n
78
TRP
82
B
ARG
83
n
79
ARG
83
B
SER
84
n
80
SER
84
B
TYR
85
n
81
TYR
85
B
MET
86
n
82
MET
86
B
ASN
87
n
83
ASN
87
B
MET
88
n
84
MET
88
B
GLU
89
n
85
GLU
89
B
LEU
90
n
86
LEU
90
B
THR
91
n
87
THR
91
B
ILE
92
n
88
ILE
92
B
PRO
93
n
89
PRO
93
B
VAL
94
n
90
VAL
94
B
PHE
95
n
91
PHE
95
B
ALA
96
n
92
ALA
96
B
THR
97
n
93
THR
97
B
ASN
98
n
94
ASN
98
B
ASP
99
n
95
ASP
99
B
ASP
100
n
96
ASP
100
B
CYS
101
n
97
CYS
101
B
ALA
102
n
98
ALA
102
B
LEU
103
n
99
LEU
103
B
ILE
104
n
100
ILE
104
B
VAL
105
n
101
VAL
105
B
LYS
106
n
102
LYS
106
B
ALA
107
n
103
ALA
107
B
LEU
108
n
104
LEU
108
B
GLN
109
n
105
GLN
109
B
GLY
110
n
106
GLY
110
B
THR
111
n
107
THR
111
B
PHE
112
n
108
PHE
112
B
LYS
113
n
109
LYS
113
B
THR
114
n
110
THR
114
B
GLY
115
n
111
GLY
115
B
ASN
116
n
112
ASN
116
B
PRO
117
n
113
PRO
117
B
ILE
118
n
114
ILE
118
B
ALA
119
n
115
ALA
119
B
THR
120
n
116
THR
120
B
ALA
121
n
117
ALA
121
B
ILE
122
n
118
ILE
122
B
ALA
123
n
119
ALA
123
B
ALA
124
n
120
ALA
124
B
ASN
125
n
121
ASN
125
B
SER
126
n
122
SER
126
B
GLY
127
n
123
GLY
127
B
ILE
128
n
124
ILE
128
B
TYR
129
n
125
TYR
129
B
ALA
1
n
1
ALA
1
C
SER
2
n
2
SER
2
C
ASN
3
n
3
ASN
3
C
PHE
4
n
4
PHE
4
C
GLU
5
n
5
GLU
5
C
GLU
6
n
6
GLU
6
C
PHE
7
n
7
PHE
7
C
VAL
8
n
8
VAL
8
C
LEU
9
n
9
LEU
9
C
VAL
10
n
10
VAL
10
C
ASP
11
n
11
ASP
11
C
ASN
12
n
12
ASN
12
C
GLY
13
n
13
GLY
13
C
GLY
14
n
14
GLY
14
C
THR
15
n
15
THR
15
C
GLY
16
n
16
GLY
16
C
ASP
17
n
17
ASP
17
C
VAL
18
n
18
VAL
18
C
LYS
19
n
19
LYS
19
C
VAL
20
n
20
VAL
20
C
ALA
21
n
21
ALA
21
C
PRO
22
n
22
PRO
22
C
SER
23
n
23
SER
23
C
ASN
24
n
24
ASN
24
C
PHE
25
n
25
PHE
25
C
ALA
26
n
26
ALA
26
C
ASN
27
n
27
ASN
27
C
GLY
28
n
28
GLY
28
C
VAL
29
n
29
VAL
29
C
ALA
30
n
30
ALA
30
C
GLU
31
n
31
GLU
31
C
TRP
32
n
32
TRP
32
C
ILE
33
n
33
ILE
33
C
SER
34
n
34
SER
34
C
SER
35
n
35
SER
35
C
ASN
36
n
36
ASN
36
C
SER
37
n
37
SER
37
C
ARG
38
n
38
ARG
38
C
SER
39
n
39
SER
39
C
GLN
40
n
40
GLN
40
C
ALA
41
n
41
ALA
41
C
TYR
42
n
42
TYR
42
C
LYS
43
n
43
LYS
43
C
VAL
44
n
44
VAL
44
C
THR
45
n
45
THR
45
C
CYS
46
n
46
CYS
46
C
SER
47
n
47
SER
47
C
VAL
48
n
48
VAL
48
C
ARG
49
n
49
ARG
49
C
GLN
50
n
50
GLN
50
C
SER
51
n
51
SER
51
C
SER
52
n
52
SER
52
C
ALA
53
n
53
ALA
53
C
ASN
54
n
54
ASN
54
C
ASN
55
n
55
ASN
55
C
ARG
56
n
56
ARG
56
C
LYS
57
n
57
LYS
57
C
TYR
58
n
58
TYR
58
C
THR
59
n
59
THR
59
C
VAL
60
n
60
VAL
60
C
LYS
61
n
61
LYS
61
C
VAL
62
n
62
VAL
62
C
GLU
63
n
63
GLU
63
C
VAL
64
n
64
VAL
64
C
PRO
65
n
65
PRO
65
C
LYS
66
n
66
LYS
66
C
VAL
67
n
67
VAL
67
C
ALA
68
n
68
ALA
68
C
THR
69
n
69
THR
69
C
GLY
74
n
70
GLY
74
C
VAL
75
n
71
VAL
75
C
GLU
76
n
72
GLU
76
C
LEU
77
n
73
LEU
77
C
PRO
78
n
74
PRO
78
C
VAL
79
n
75
VAL
79
C
ALA
80
n
76
ALA
80
C
ALA
81
n
77
ALA
81
C
TRP
82
n
78
TRP
82
C
ARG
83
n
79
ARG
83
C
SER
84
n
80
SER
84
C
TYR
85
n
81
TYR
85
C
MET
86
n
82
MET
86
C
ASN
87
n
83
ASN
87
C
MET
88
n
84
MET
88
C
GLU
89
n
85
GLU
89
C
LEU
90
n
86
LEU
90
C
THR
91
n
87
THR
91
C
ILE
92
n
88
ILE
92
C
PRO
93
n
89
PRO
93
C
VAL
94
n
90
VAL
94
C
PHE
95
n
91
PHE
95
C
ALA
96
n
92
ALA
96
C
THR
97
n
93
THR
97
C
ASN
98
n
94
ASN
98
C
ASP
99
n
95
ASP
99
C
ASP
100
n
96
ASP
100
C
CYS
101
n
97
CYS
101
C
ALA
102
n
98
ALA
102
C
LEU
103
n
99
LEU
103
C
ILE
104
n
100
ILE
104
C
VAL
105
n
101
VAL
105
C
LYS
106
n
102
LYS
106
C
ALA
107
n
103
ALA
107
C
LEU
108
n
104
LEU
108
C
GLN
109
n
105
GLN
109
C
GLY
110
n
106
GLY
110
C
THR
111
n
107
THR
111
C
PHE
112
n
108
PHE
112
C
LYS
113
n
109
LYS
113
C
THR
114
n
110
THR
114
C
GLY
115
n
111
GLY
115
C
ASN
116
n
112
ASN
116
C
PRO
117
n
113
PRO
117
C
ILE
118
n
114
ILE
118
C
ALA
119
n
115
ALA
119
C
THR
120
n
116
THR
120
C
ALA
121
n
117
ALA
121
C
ILE
122
n
118
ILE
122
C
ALA
123
n
119
ALA
123
C
ALA
124
n
120
ALA
124
C
ASN
125
n
121
ASN
125
C
SER
126
n
122
SER
126
C
GLY
127
n
123
GLY
127
C
ILE
128
n
124
ILE
128
C
TYR
129
n
125
TYR
129
C
complete icosahedral assembly
180
complete icosahedral assembly
icosahedral asymmetric unit
3
trimeric
icosahedral pentamer
15
pentadecameric
icosahedral 23 hexamer
18
octadecameric
icosahedral asymmetric unit, std point frame
3
trimeric
crystal asymmetric unit, crystal frame
30
30-meric
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
1_555
x,y,z
identity operation
0.00000
0.00000
0.00000
-1.00000000
0.00000000
0.00000000
0.00000000
-0.35682301
0.93417202
0.00000000
0.93417202
0.35682301
transform to point frame
0.00000
0.00000
0.00000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
1_555
x,y,z
identity operation
0.00000
0.00000
0.00000
0.30901699
-0.75576189
0.57734953
0.75576187
0.56366035
0.33333315
-0.57734952
0.33333315
0.74535664
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
-0.46708653
0.35682164
0.46708652
-0.14235203
0.87267753
-0.35682163
0.87267753
0.33333504
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
0.46708653
-0.35682164
-0.46708652
-0.14235203
0.87267753
0.35682163
0.87267753
0.33333504
point symmetry operation
0.00000
0.00000
0.00000
0.30901699
0.75576189
-0.57734953
-0.75576187
0.56366035
0.33333315
0.57734952
0.33333315
0.74535664
point symmetry operation
0.00000
0.00000
0.00000
-1.00000000
0.00000000
0.00000000
0.00000000
0.74535469
0.66666813
0.00000000
0.66666813
-0.74535469
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
0.75576189
-0.57734953
0.17841013
0.64234947
0.74535694
0.93417252
0.12732296
-0.33333248
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
0.46708653
-0.35682164
0.11026352
0.47568353
0.87267813
0.57735037
-0.74535585
0.33333345
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
-0.46708653
0.35682164
-0.11026352
0.47568353
0.87267813
-0.57735037
-0.74535585
0.33333345
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
-0.75576189
0.57734953
-0.17841013
0.64234947
0.74535694
-0.93417252
0.12732296
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point symmetry operation
0.00000
0.00000
0.00000
-1.00000000
0.00000000
0.00000000
0.00000000
-0.74535469
-0.66666813
0.00000000
-0.66666813
0.74535469
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
0.75576189
-0.57734953
-0.17841013
-0.64234947
-0.74535694
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-0.12732296
0.33333248
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
0.46708653
-0.35682164
-0.11026352
-0.47568353
-0.87267813
-0.57735037
0.74535585
-0.33333345
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
-0.46708653
0.35682164
0.11026352
-0.47568353
-0.87267813
0.57735037
0.74535585
-0.33333345
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
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0.57734953
0.17841013
-0.64234947
-0.74535694
0.93417252
-0.12732296
0.33333248
point symmetry operation
0.00000
0.00000
0.00000
1.00000000
0.00000000
0.00000000
0.00000000
-1.00000000
0.00000000
0.00000000
0.00000000
-1.00000000
point symmetry operation
0.00000
0.00000
0.00000
0.30901699
-0.75576189
0.57734953
-0.75576187
-0.56366035
-0.33333315
0.57734952
-0.33333315
-0.74535664
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
-0.46708653
0.35682164
-0.46708652
0.14235203
-0.87267753
0.35682163
-0.87267753
-0.33333504
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
0.46708653
-0.35682164
0.46708652
0.14235203
-0.87267753
-0.35682163
-0.87267753
-0.33333504
point symmetry operation
0.00000
0.00000
0.00000
0.30901699
0.75576189
-0.57734953
0.75576187
-0.56366035
-0.33333315
-0.57734952
-0.33333315
-0.74535664
point symmetry operation
0.00000
0.00000
0.00000
0.00000000
-0.93417202
-0.35682301
0.35682300
-0.33333406
0.87267734
-0.93417200
-0.12732266
0.33333406
point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
-0.64549666
-0.57735090
-0.64549665
-0.16666813
0.74535615
-0.57735089
0.74535615
-0.33333187
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
-0.17841013
-0.93417254
-0.75576187
0.64234947
0.12732296
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0.74535694
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point symmetry operation
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0.00000
0.00000
0.30901699
-0.17841013
-0.93417254
0.17841013
0.97568390
-0.12732137
0.93417252
-0.12732137
0.33333309
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
-0.64549666
-0.57735090
0.86602539
0.37267832
0.33333297
0.00000000
-0.66666703
0.74535566
point symmetry operation
0.00000
0.00000
0.00000
0.00000000
-0.93417202
-0.35682301
-0.35682300
0.33333406
-0.87267734
0.93417200
0.12732266
-0.33333406
point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
-0.64549666
-0.57735090
0.64549665
0.16666813
-0.74535615
0.57735089
-0.74535615
0.33333187
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
-0.17841013
-0.93417254
0.75576187
-0.64234947
-0.12732296
-0.57734952
-0.74535694
0.33333248
point symmetry operation
0.00000
0.00000
0.00000
0.30901699
-0.17841013
-0.93417254
-0.17841013
-0.97568390
0.12732137
-0.93417252
0.12732137
-0.33333309
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
-0.64549666
-0.57735090
-0.86602539
-0.37267832
-0.33333297
0.00000000
0.66666703
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point symmetry operation
0.00000
0.00000
0.00000
0.00000000
0.93417202
0.35682301
-0.35682300
-0.33333406
0.87267734
0.93417200
-0.12732266
0.33333406
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
0.64549666
0.57735090
-0.86602539
0.37267832
0.33333297
0.00000000
-0.66666703
0.74535566
point symmetry operation
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0.00000
0.00000
0.30901699
0.17841013
0.93417254
-0.17841013
0.97568390
-0.12732137
-0.93417252
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0.33333309
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
0.17841013
0.93417254
0.75576187
0.64234947
0.12732296
-0.57734952
0.74535694
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point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
0.64549666
0.57735090
0.64549665
-0.16666813
0.74535615
0.57735089
0.74535615
-0.33333187
point symmetry operation
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0.00000
0.00000
0.00000000
0.93417202
0.35682301
0.35682300
0.33333406
-0.87267734
-0.93417200
0.12732266
-0.33333406
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
0.64549666
0.57735090
0.86602539
-0.37267832
-0.33333297
0.00000000
0.66666703
-0.74535566
point symmetry operation
0.00000
0.00000
0.00000
0.30901699
0.17841013
0.93417254
0.17841013
-0.97568390
0.12732137
0.93417252
0.12732137
-0.33333309
point symmetry operation
0.00000
0.00000
0.00000
-0.30901699
0.17841013
0.93417254
-0.75576187
-0.64234947
-0.12732296
0.57734952
-0.74535694
0.33333248
point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
0.64549666
0.57735090
-0.64549665
0.16666813
-0.74535615
-0.57735089
-0.74535615
0.33333187
point symmetry operation
0.00000
0.00000
0.00000
0.00000000
0.35682301
-0.93417202
-0.93417200
-0.33333406
-0.12732266
-0.35682300
0.87267734
0.33333406
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
-0.11026352
-0.57735038
-0.46708652
0.47568354
-0.74535585
0.35682163
0.87267813
0.33333346
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
-0.86602541
0.00000000
0.64549665
0.37267832
-0.66666703
0.57735089
0.33333297
0.74535566
point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
-0.86602541
0.00000000
0.86602539
-0.50000000
-0.00000147
0.00000000
-0.00000147
1.00000000
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
-0.11026352
-0.57735038
-0.11026352
-0.93633965
0.33333168
-0.57735037
0.33333168
0.74535664
point symmetry operation
0.00000
0.00000
0.00000
0.00000000
-0.35682301
0.93417202
0.93417200
-0.33333406
-0.12732266
0.35682300
0.87267734
0.33333406
point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
0.11026352
0.57735038
0.11026352
-0.93633965
0.33333168
0.57735037
0.33333168
0.74535664
point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
0.86602541
0.00000000
-0.86602539
-0.50000000
-0.00000147
0.00000000
-0.00000147
1.00000000
point symmetry operation
0.00000
0.00000
0.00000
0.50000000
0.86602541
0.00000000
-0.64549665
0.37267832
-0.66666703
-0.57735089
0.33333297
0.74535566
point symmetry operation
0.00000
0.00000
0.00000
0.80901699
0.11026352
0.57735038
0.46708652
0.47568354
-0.74535585
-0.35682163
0.87267813
0.33333346
point symmetry operation
0.00000
0.00000
0.00000
0.00000000
0.35682301
-0.93417202
0.93417200
0.33333406
0.12732266
0.35682300
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point symmetry operation
0.00000
0.00000
0.00000
0.80901699
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0.46708652
-0.47568354
0.74535585
-0.35682163
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point symmetry operation
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0.00000
0.00000
0.50000000
-0.86602541
0.00000000
-0.64549665
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0.66666703
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point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
-0.86602541
0.00000000
-0.86602539
0.50000000
0.00000147
0.00000000
0.00000147
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point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
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0.11026352
0.93633965
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0.57735037
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point symmetry operation
0.00000
0.00000
0.00000
0.00000000
-0.35682301
0.93417202
-0.93417200
0.33333406
0.12732266
-0.35682300
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point symmetry operation
0.00000
0.00000
0.00000
-0.80901699
0.11026352
0.57735038
-0.11026352
0.93633965
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point symmetry operation
0.00000
0.00000
0.00000
-0.50000000
0.86602541
0.00000000
0.86602539
0.50000000
0.00000147
0.00000000
0.00000147
-1.00000000
point symmetry operation
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0.00000
0.00000
0.50000000
0.86602541
0.00000000
0.64549665
-0.37267832
0.66666703
0.57735089
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point symmetry operation
0.00000
0.00000
0.00000
0.80901699
0.11026352
0.57735038
-0.46708652
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0.74535585
0.35682163
-0.87267813
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point symmetry operation
0.00000
0.00000
0.00000
A
O
SER
84
A
O
SER
80
A
N
VAL
64
A
N
VAL
64
A
O
LYS
57
A
O
LYS
57
A
N
ARG
49
A
N
ARG
49
A
O
VAL
44
A
O
VAL
44
A
N
TRP
32
A
N
TRP
32
A
O
GLU
31
A
O
GLU
31
A
N
ASN
24
A
N
ASN
24
A
O
PHE
7
A
O
PHE
7
A
N
VAL
20
A
N
VAL
20
B
O
SER
84
B
O
SER
80
B
N
VAL
64
B
N
VAL
64
B
O
LYS
57
B
O
LYS
57
B
N
ARG
49
B
N
ARG
49
B
O
VAL
44
B
O
VAL
44
B
N
TRP
32
B
N
TRP
32
B
O
GLU
31
B
O
GLU
31
B
N
ASN
24
B
N
ASN
24
B
O
PHE
7
B
O
PHE
7
B
N
VAL
20
B
N
VAL
20
C
O
ALA
81
C
O
ALA
77
C
N
LYS
66
C
N
LYS
66
C
O
LYS
57
C
O
LYS
57
C
N
ARG
49
C
N
ARG
49
C
O
VAL
44
C
O
VAL
44
C
N
TRP
32
C
N
TRP
32
C
O
GLU
31
C
O
GLU
31
C
N
ASN
24
C
N
ASN
24
C
O
VAL
18
C
O
VAL
18
C
N
VAL
10
C
N
VAL
10
1
B
THR
73
B
THR
69
1
Y
1
B
GLY
74
B
GLY
70
1
Y
1
B
VAL
75
B
VAL
71
1
Y
1
B
GLU
76
B
GLU
72
1
Y
1
B
LEU
77
B
LEU
73
1
Y
1
B
PRO
78
B
PRO
74
1
Y
1
B
VAL
79
B
VAL
75
1
Y
1
B
ALA
80
B
ALA
76
1
Y
1
B
ALA
81
B
ALA
77
1
Y
1
-24.62
2.10
128.40
103.78
B
B
B
C
N
CD
ASN
PRO
PRO
116
117
117
Y
1
7.24
1.10
114.20
121.44
C
C
C
CA
CB
SG
CYS
CYS
CYS
46
46
46
N
1
A
SER
51
-58.71
-85.32
1
A
VAL
75
-155.26
-20.88
1
A
GLU
76
84.89
-59.56
1
A
PRO
117
-24.50
-73.62
1
B
SER
2
153.30
119.23
1
B
PHE
4
-50.63
94.36
1
B
ARG
49
-176.44
138.97
1
B
SER
51
-78.81
-89.88
1
B
PRO
93
-49.47
154.93
1
B
PRO
117
-7.48
-79.56
1
C
SER
2
179.50
145.51
1
C
PHE
4
-85.24
46.85
1
C
THR
15
-85.62
-120.78
1
C
ALA
26
-71.71
-120.30
1
C
ASN
36
72.03
171.89
1
C
SER
37
-30.96
113.20
1
C
SER
51
-81.90
-107.06
1
C
GLU
76
76.40
-45.56
1
C
PHE
95
-66.43
6.56
1
C
PRO
117
-33.59
-76.04
PARHCSDX.PRO
TOPHCSDX.PRO
0.256
0.256
3.5
30.0
51856
47.8
1
RESTRAINED
MOLECULAR REPLACEMENT
PDB ENTRY 1FRS
3.5
30.0
0
2752
0
0
2752
0.016
1.7
26.2
1.29
1
CONSTRAINTS
1
X-RAY DIFFRACTION
0.351
3.56
1320
20
26.0
3.50
20.
1FR5
52800
-3
0.139
1
6.9
48
0.387
3.50
3.56
26
model building
X-PLOR
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
PHAGE FR CAPSIDS WITH A FOUR RESIDUE DELETION IN THE COAT PROTEIN FG LOOP
1
N
N
1
N
N
1
N
N
A
ALA
26
A
ALA
26
HELX_P
A
GLY
28
A
GLY
28
5
1
3
A
ARG
38
A
ARG
38
HELX_P
A
GLN
40
A
GLN
40
5
2
3
A
ASN
98
A
ASN
94
HELX_P
A
THR
111
A
THR
107
1
3
14
A
PRO
117
A
PRO
113
HELX_P
A
ALA
124
A
ALA
120
1
4
8
B
ARG
38
B
ARG
38
HELX_P
B
GLN
40
B
GLN
40
5
5
3
B
ASN
98
B
ASN
94
HELX_P
B
PHE
112
B
PHE
108
1
6
15
B
PRO
117
B
PRO
113
HELX_P
B
ALA
124
B
ALA
120
1
7
8
C
ARG
38
C
ARG
38
HELX_P
C
GLN
40
C
GLN
40
5
8
3
C
ASN
98
C
ASN
94
HELX_P
C
PHE
112
C
PHE
108
1
9
15
C
PRO
117
C
PRO
113
HELX_P
C
ALA
124
C
ALA
120
1
10
8
VIRUS
VIRAL COAT PROTEIN, CAPSID, Icosahedral virus, Virus
given
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000000
0.00000000
0.00000000
1.00000000
0.00000
0.00000
0.00000
generate
0.30901699
-0.75576189
0.57734953
0.75576187
0.56366035
0.33333315
-0.57734952
0.33333315
0.74535664
0.00000
0.00000
0.00000
generate
-0.80901699
-0.46708653
0.35682164
0.46708652
-0.14235203
0.87267753
-0.35682163
0.87267753
0.33333504
0.00000
0.00000
0.00000
generate
-0.80901699
0.46708653
-0.35682164
-0.46708652
-0.14235203
0.87267753
0.35682163
0.87267753
0.33333504
0.00000
0.00000
0.00000
generate
0.30901699
0.75576189
-0.57734953
-0.75576187
0.56366035
0.33333315
0.57734952
0.33333315
0.74535664
0.00000
0.00000
0.00000
generate
-1.00000000
0.00000000
0.00000000
0.00000000
0.74535469
0.66666813
0.00000000
0.66666813
-0.74535469
0.00000
0.00000
0.00000
generate
-0.30901699
0.75576189
-0.57734953
0.17841013
0.64234947
0.74535694
0.93417252
0.12732296
-0.33333248
0.00000
0.00000
0.00000
generate
0.80901699
0.46708653
-0.35682164
0.11026352
0.47568353
0.87267813
0.57735037
-0.74535585
0.33333345
0.00000
0.00000
0.00000
generate
0.80901699
-0.46708653
0.35682164
-0.11026352
0.47568353
0.87267813
-0.57735037
-0.74535585
0.33333345
0.00000
0.00000
0.00000
generate
-0.30901699
-0.75576189
0.57734953
-0.17841013
0.64234947
0.74535694
-0.93417252
0.12732296
-0.33333248
0.00000
0.00000
0.00000
COAT_BPFR
UNP
1
1
P03614
ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATQVQGGVELPVA
AWRSYMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY
1
129
1FR5
1
129
P03614
A
1
1
125
1
129
1FR5
1
129
P03614
B
1
1
125
1
129
1FR5
1
129
P03614
C
1
1
125
1
GLN
deletion
1FR5
A
P03614
UNP
70
1
VAL
deletion
1FR5
A
P03614
UNP
71
1
GLN
deletion
1FR5
A
P03614
UNP
72
1
GLY
deletion
1FR5
A
P03614
UNP
73
2
GLN
deletion
1FR5
B
P03614
UNP
70
2
VAL
deletion
1FR5
B
P03614
UNP
71
2
GLN
deletion
1FR5
B
P03614
UNP
72
2
GLY
deletion
1FR5
B
P03614
UNP
73
3
GLN
deletion
1FR5
C
P03614
UNP
70
3
VAL
deletion
1FR5
C
P03614
UNP
71
3
GLN
deletion
1FR5
C
P03614
UNP
72
3
GLY
deletion
1FR5
C
P03614
UNP
73
5
2
5
2
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
83
A
ARG
79
A
PRO
93
A
PRO
89
A
ASN
55
A
ASN
55
A
PRO
65
A
PRO
65
A
LYS
43
A
LYS
43
A
ARG
49
A
ARG
49
A
ALA
30
A
ALA
30
A
ILE
33
A
ILE
33
A
ALA
21
A
ALA
21
A
ASN
24
A
ASN
24
A
PHE
7
A
PHE
7
A
VAL
10
A
VAL
10
A
VAL
18
A
VAL
18
A
VAL
20
A
VAL
20
B
SER
84
B
SER
80
B
PRO
93
B
PRO
89
B
ASN
55
B
ASN
55
B
VAL
64
B
VAL
64
B
LYS
43
B
LYS
43
B
GLN
50
B
GLN
50
B
ALA
30
B
ALA
30
B
ILE
33
B
ILE
33
B
ALA
21
B
ALA
21
B
ASN
24
B
ASN
24
B
PHE
7
B
PHE
7
B
VAL
10
B
VAL
10
B
VAL
18
B
VAL
18
B
VAL
20
B
VAL
20
C
ALA
80
C
ALA
76
C
PRO
93
C
PRO
89
C
ASN
55
C
ASN
55
C
VAL
67
C
VAL
67
C
LYS
43
C
LYS
43
C
GLN
50
C
GLN
50
C
ALA
30
C
ALA
30
C
SER
34
C
SER
34
C
VAL
18
C
VAL
18
C
PHE
25
C
PHE
25
C
PHE
7
C
PHE
7
C
VAL
10
C
VAL
10
155
H 3 2