0.003786 0.002186 0.000000 0.000000 0.004372 0.000000 0.000000 0.000000 0.001529 0.000000 0.000000 0.000000 Axblom, C. Tars, K. Fridborg, K. Bundule, M. Orna, L. Liljas, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 540 90.00 90.00 120.00 264.100 264.100 654.200 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Virology VIRLAX 0922 0042-6822 249 80 88 10.1006/viro.1998.9279 9740779 Structure of phage fr capsids with a deletion in the FG loop: implications for viral assembly. 1998 UK J.Mol.Biol. JMOBAK 0070 0022-2836 244 279 Crystal Structure of Bacteriophage Fr Capsids at 3.5 A Resolution 1994 10.2210/pdb1fr5/pdb pdb_00001fr5 1.000000 0.000000 0.000000 0.000000 0.934172 0.356823 0.000000 -0.356823 0.934172 0.000000 0.000000 0.000000 293 1 IMAGE PLATE 1997-01-21 MARRESEARCH M x-ray 1 0.87 1.0 PX9.6 SRS 0.87 SYNCHROTRON SRS BEAMLINE PX9.6 13333.982 BACTERIOPHAGE FR CAPSID DEL(70-73) 3 man polymer no no ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATGVELPVAAWRS YMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATGVELPVAAWRS YMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY A,B,C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Levivirus Enterobacteria phage MS2 Escherichia sample 12017 Enterobacteria phage fr CYTOPLASM 562 Escherichia coli RR1 PLASMID PFRS5 1 atom_site cell database_2 database_PDB_matrix pdbx_database_remark pdbx_database_status pdbx_struct_oper_list pdbx_validate_rmsd_angle pdbx_validate_torsion struct_ncs_oper struct_ref_seq_dif pdbx_initial_refinement_model repository Initial release Coordinates and associated matrices have been transformed from the icosahedral point symmetry frame to the crystallographic frame repository Remediation Version format compliance Version format compliance Advisory Atomic model Data collection Database references Derived calculations Other Refinement description Refinement description 1 0 1999-01-13 1 1 2008-03-24 1 2 2011-07-13 2 0 2023-04-19 2 1 2023-08-09 _atom_site.Cartn_y _atom_site.Cartn_z _cell.Z_PDB _database_2.pdbx_DOI _database_2.pdbx_database_accession _database_PDB_matrix.origx[2][2] _database_PDB_matrix.origx[2][3] _database_PDB_matrix.origx[3][2] _database_PDB_matrix.origx[3][3] _pdbx_database_status.process_site _pdbx_struct_oper_list.id _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.type _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi _struct_ref_seq_dif.details Y BNL 1998-07-22 REL REL 1FRS PDB ENTRY 1FRS PDB experimental model 532 I ALA 1 n 1 ALA 1 A SER 2 n 2 SER 2 A ASN 3 n 3 ASN 3 A PHE 4 n 4 PHE 4 A GLU 5 n 5 GLU 5 A GLU 6 n 6 GLU 6 A PHE 7 n 7 PHE 7 A VAL 8 n 8 VAL 8 A LEU 9 n 9 LEU 9 A VAL 10 n 10 VAL 10 A ASP 11 n 11 ASP 11 A ASN 12 n 12 ASN 12 A GLY 13 n 13 GLY 13 A GLY 14 n 14 GLY 14 A THR 15 n 15 THR 15 A GLY 16 n 16 GLY 16 A ASP 17 n 17 ASP 17 A VAL 18 n 18 VAL 18 A LYS 19 n 19 LYS 19 A VAL 20 n 20 VAL 20 A ALA 21 n 21 ALA 21 A PRO 22 n 22 PRO 22 A SER 23 n 23 SER 23 A ASN 24 n 24 ASN 24 A PHE 25 n 25 PHE 25 A ALA 26 n 26 ALA 26 A ASN 27 n 27 ASN 27 A GLY 28 n 28 GLY 28 A VAL 29 n 29 VAL 29 A ALA 30 n 30 ALA 30 A GLU 31 n 31 GLU 31 A TRP 32 n 32 TRP 32 A ILE 33 n 33 ILE 33 A SER 34 n 34 SER 34 A SER 35 n 35 SER 35 A ASN 36 n 36 ASN 36 A SER 37 n 37 SER 37 A ARG 38 n 38 ARG 38 A SER 39 n 39 SER 39 A GLN 40 n 40 GLN 40 A ALA 41 n 41 ALA 41 A TYR 42 n 42 TYR 42 A LYS 43 n 43 LYS 43 A VAL 44 n 44 VAL 44 A THR 45 n 45 THR 45 A CYS 46 n 46 CYS 46 A SER 47 n 47 SER 47 A VAL 48 n 48 VAL 48 A ARG 49 n 49 ARG 49 A GLN 50 n 50 GLN 50 A SER 51 n 51 SER 51 A SER 52 n 52 SER 52 A ALA 53 n 53 ALA 53 A ASN 54 n 54 ASN 54 A ASN 55 n 55 ASN 55 A ARG 56 n 56 ARG 56 A LYS 57 n 57 LYS 57 A TYR 58 n 58 TYR 58 A THR 59 n 59 THR 59 A VAL 60 n 60 VAL 60 A LYS 61 n 61 LYS 61 A VAL 62 n 62 VAL 62 A GLU 63 n 63 GLU 63 A VAL 64 n 64 VAL 64 A PRO 65 n 65 PRO 65 A LYS 66 n 66 LYS 66 A VAL 67 n 67 VAL 67 A ALA 68 n 68 ALA 68 A THR 69 n 69 THR 69 A GLY 74 n 70 GLY 74 A VAL 75 n 71 VAL 75 A GLU 76 n 72 GLU 76 A LEU 77 n 73 LEU 77 A PRO 78 n 74 PRO 78 A VAL 79 n 75 VAL 79 A ALA 80 n 76 ALA 80 A ALA 81 n 77 ALA 81 A TRP 82 n 78 TRP 82 A ARG 83 n 79 ARG 83 A SER 84 n 80 SER 84 A TYR 85 n 81 TYR 85 A MET 86 n 82 MET 86 A ASN 87 n 83 ASN 87 A MET 88 n 84 MET 88 A GLU 89 n 85 GLU 89 A LEU 90 n 86 LEU 90 A THR 91 n 87 THR 91 A ILE 92 n 88 ILE 92 A PRO 93 n 89 PRO 93 A VAL 94 n 90 VAL 94 A PHE 95 n 91 PHE 95 A ALA 96 n 92 ALA 96 A THR 97 n 93 THR 97 A ASN 98 n 94 ASN 98 A ASP 99 n 95 ASP 99 A ASP 100 n 96 ASP 100 A CYS 101 n 97 CYS 101 A ALA 102 n 98 ALA 102 A LEU 103 n 99 LEU 103 A ILE 104 n 100 ILE 104 A VAL 105 n 101 VAL 105 A LYS 106 n 102 LYS 106 A ALA 107 n 103 ALA 107 A LEU 108 n 104 LEU 108 A GLN 109 n 105 GLN 109 A GLY 110 n 106 GLY 110 A THR 111 n 107 THR 111 A PHE 112 n 108 PHE 112 A LYS 113 n 109 LYS 113 A THR 114 n 110 THR 114 A GLY 115 n 111 GLY 115 A ASN 116 n 112 ASN 116 A PRO 117 n 113 PRO 117 A ILE 118 n 114 ILE 118 A ALA 119 n 115 ALA 119 A THR 120 n 116 THR 120 A ALA 121 n 117 ALA 121 A ILE 122 n 118 ILE 122 A ALA 123 n 119 ALA 123 A ALA 124 n 120 ALA 124 A ASN 125 n 121 ASN 125 A SER 126 n 122 SER 126 A GLY 127 n 123 GLY 127 A ILE 128 n 124 ILE 128 A TYR 129 n 125 TYR 129 A ALA 1 n 1 ALA 1 B SER 2 n 2 SER 2 B ASN 3 n 3 ASN 3 B PHE 4 n 4 PHE 4 B GLU 5 n 5 GLU 5 B GLU 6 n 6 GLU 6 B PHE 7 n 7 PHE 7 B VAL 8 n 8 VAL 8 B LEU 9 n 9 LEU 9 B VAL 10 n 10 VAL 10 B ASP 11 n 11 ASP 11 B ASN 12 n 12 ASN 12 B GLY 13 n 13 GLY 13 B GLY 14 n 14 GLY 14 B THR 15 n 15 THR 15 B GLY 16 n 16 GLY 16 B ASP 17 n 17 ASP 17 B VAL 18 n 18 VAL 18 B LYS 19 n 19 LYS 19 B VAL 20 n 20 VAL 20 B ALA 21 n 21 ALA 21 B PRO 22 n 22 PRO 22 B SER 23 n 23 SER 23 B ASN 24 n 24 ASN 24 B PHE 25 n 25 PHE 25 B ALA 26 n 26 ALA 26 B ASN 27 n 27 ASN 27 B GLY 28 n 28 GLY 28 B VAL 29 n 29 VAL 29 B ALA 30 n 30 ALA 30 B GLU 31 n 31 GLU 31 B TRP 32 n 32 TRP 32 B ILE 33 n 33 ILE 33 B SER 34 n 34 SER 34 B SER 35 n 35 SER 35 B ASN 36 n 36 ASN 36 B SER 37 n 37 SER 37 B ARG 38 n 38 ARG 38 B SER 39 n 39 SER 39 B GLN 40 n 40 GLN 40 B ALA 41 n 41 ALA 41 B TYR 42 n 42 TYR 42 B LYS 43 n 43 LYS 43 B VAL 44 n 44 VAL 44 B THR 45 n 45 THR 45 B CYS 46 n 46 CYS 46 B SER 47 n 47 SER 47 B VAL 48 n 48 VAL 48 B ARG 49 n 49 ARG 49 B GLN 50 n 50 GLN 50 B SER 51 n 51 SER 51 B SER 52 n 52 SER 52 B ALA 53 n 53 ALA 53 B ASN 54 n 54 ASN 54 B ASN 55 n 55 ASN 55 B ARG 56 n 56 ARG 56 B LYS 57 n 57 LYS 57 B TYR 58 n 58 TYR 58 B THR 59 n 59 THR 59 B VAL 60 n 60 VAL 60 B LYS 61 n 61 LYS 61 B VAL 62 n 62 VAL 62 B GLU 63 n 63 GLU 63 B VAL 64 n 64 VAL 64 B PRO 65 n 65 PRO 65 B LYS 66 n 66 LYS 66 B VAL 67 n 67 VAL 67 B ALA 68 n 68 ALA 68 B n 69 73 B n 70 74 B n 71 75 B n 72 76 B n 73 77 B n 74 78 B n 75 79 B n 76 80 B n 77 81 B TRP 82 n 78 TRP 82 B ARG 83 n 79 ARG 83 B SER 84 n 80 SER 84 B TYR 85 n 81 TYR 85 B MET 86 n 82 MET 86 B ASN 87 n 83 ASN 87 B MET 88 n 84 MET 88 B GLU 89 n 85 GLU 89 B LEU 90 n 86 LEU 90 B THR 91 n 87 THR 91 B ILE 92 n 88 ILE 92 B PRO 93 n 89 PRO 93 B VAL 94 n 90 VAL 94 B PHE 95 n 91 PHE 95 B ALA 96 n 92 ALA 96 B THR 97 n 93 THR 97 B ASN 98 n 94 ASN 98 B ASP 99 n 95 ASP 99 B ASP 100 n 96 ASP 100 B CYS 101 n 97 CYS 101 B ALA 102 n 98 ALA 102 B LEU 103 n 99 LEU 103 B ILE 104 n 100 ILE 104 B VAL 105 n 101 VAL 105 B LYS 106 n 102 LYS 106 B ALA 107 n 103 ALA 107 B LEU 108 n 104 LEU 108 B GLN 109 n 105 GLN 109 B GLY 110 n 106 GLY 110 B THR 111 n 107 THR 111 B PHE 112 n 108 PHE 112 B LYS 113 n 109 LYS 113 B THR 114 n 110 THR 114 B GLY 115 n 111 GLY 115 B ASN 116 n 112 ASN 116 B PRO 117 n 113 PRO 117 B ILE 118 n 114 ILE 118 B ALA 119 n 115 ALA 119 B THR 120 n 116 THR 120 B ALA 121 n 117 ALA 121 B ILE 122 n 118 ILE 122 B ALA 123 n 119 ALA 123 B ALA 124 n 120 ALA 124 B ASN 125 n 121 ASN 125 B SER 126 n 122 SER 126 B GLY 127 n 123 GLY 127 B ILE 128 n 124 ILE 128 B TYR 129 n 125 TYR 129 B ALA 1 n 1 ALA 1 C SER 2 n 2 SER 2 C ASN 3 n 3 ASN 3 C PHE 4 n 4 PHE 4 C GLU 5 n 5 GLU 5 C GLU 6 n 6 GLU 6 C PHE 7 n 7 PHE 7 C VAL 8 n 8 VAL 8 C LEU 9 n 9 LEU 9 C VAL 10 n 10 VAL 10 C ASP 11 n 11 ASP 11 C ASN 12 n 12 ASN 12 C GLY 13 n 13 GLY 13 C GLY 14 n 14 GLY 14 C THR 15 n 15 THR 15 C GLY 16 n 16 GLY 16 C ASP 17 n 17 ASP 17 C VAL 18 n 18 VAL 18 C LYS 19 n 19 LYS 19 C VAL 20 n 20 VAL 20 C ALA 21 n 21 ALA 21 C PRO 22 n 22 PRO 22 C SER 23 n 23 SER 23 C ASN 24 n 24 ASN 24 C PHE 25 n 25 PHE 25 C ALA 26 n 26 ALA 26 C ASN 27 n 27 ASN 27 C GLY 28 n 28 GLY 28 C VAL 29 n 29 VAL 29 C ALA 30 n 30 ALA 30 C GLU 31 n 31 GLU 31 C TRP 32 n 32 TRP 32 C ILE 33 n 33 ILE 33 C SER 34 n 34 SER 34 C SER 35 n 35 SER 35 C ASN 36 n 36 ASN 36 C SER 37 n 37 SER 37 C ARG 38 n 38 ARG 38 C SER 39 n 39 SER 39 C GLN 40 n 40 GLN 40 C ALA 41 n 41 ALA 41 C TYR 42 n 42 TYR 42 C LYS 43 n 43 LYS 43 C VAL 44 n 44 VAL 44 C THR 45 n 45 THR 45 C CYS 46 n 46 CYS 46 C SER 47 n 47 SER 47 C VAL 48 n 48 VAL 48 C ARG 49 n 49 ARG 49 C GLN 50 n 50 GLN 50 C SER 51 n 51 SER 51 C SER 52 n 52 SER 52 C ALA 53 n 53 ALA 53 C ASN 54 n 54 ASN 54 C ASN 55 n 55 ASN 55 C ARG 56 n 56 ARG 56 C LYS 57 n 57 LYS 57 C TYR 58 n 58 TYR 58 C THR 59 n 59 THR 59 C VAL 60 n 60 VAL 60 C LYS 61 n 61 LYS 61 C VAL 62 n 62 VAL 62 C GLU 63 n 63 GLU 63 C VAL 64 n 64 VAL 64 C PRO 65 n 65 PRO 65 C LYS 66 n 66 LYS 66 C VAL 67 n 67 VAL 67 C ALA 68 n 68 ALA 68 C THR 69 n 69 THR 69 C GLY 74 n 70 GLY 74 C VAL 75 n 71 VAL 75 C GLU 76 n 72 GLU 76 C LEU 77 n 73 LEU 77 C PRO 78 n 74 PRO 78 C VAL 79 n 75 VAL 79 C ALA 80 n 76 ALA 80 C ALA 81 n 77 ALA 81 C TRP 82 n 78 TRP 82 C ARG 83 n 79 ARG 83 C SER 84 n 80 SER 84 C TYR 85 n 81 TYR 85 C MET 86 n 82 MET 86 C ASN 87 n 83 ASN 87 C MET 88 n 84 MET 88 C GLU 89 n 85 GLU 89 C LEU 90 n 86 LEU 90 C THR 91 n 87 THR 91 C ILE 92 n 88 ILE 92 C PRO 93 n 89 PRO 93 C VAL 94 n 90 VAL 94 C PHE 95 n 91 PHE 95 C ALA 96 n 92 ALA 96 C THR 97 n 93 THR 97 C ASN 98 n 94 ASN 98 C ASP 99 n 95 ASP 99 C ASP 100 n 96 ASP 100 C CYS 101 n 97 CYS 101 C ALA 102 n 98 ALA 102 C LEU 103 n 99 LEU 103 C ILE 104 n 100 ILE 104 C VAL 105 n 101 VAL 105 C LYS 106 n 102 LYS 106 C ALA 107 n 103 ALA 107 C LEU 108 n 104 LEU 108 C GLN 109 n 105 GLN 109 C GLY 110 n 106 GLY 110 C THR 111 n 107 THR 111 C PHE 112 n 108 PHE 112 C LYS 113 n 109 LYS 113 C THR 114 n 110 THR 114 C GLY 115 n 111 GLY 115 C ASN 116 n 112 ASN 116 C PRO 117 n 113 PRO 117 C ILE 118 n 114 ILE 118 C ALA 119 n 115 ALA 119 C THR 120 n 116 THR 120 C ALA 121 n 117 ALA 121 C ILE 122 n 118 ILE 122 C ALA 123 n 119 ALA 123 C ALA 124 n 120 ALA 124 C ASN 125 n 121 ASN 125 C SER 126 n 122 SER 126 C GLY 127 n 123 GLY 127 C ILE 128 n 124 ILE 128 C TYR 129 n 125 TYR 129 C complete icosahedral assembly 180 complete icosahedral assembly icosahedral asymmetric unit 3 trimeric icosahedral pentamer 15 pentadecameric icosahedral 23 hexamer 18 octadecameric icosahedral asymmetric unit, std point frame 3 trimeric crystal asymmetric unit, crystal frame 30 30-meric 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000000 -0.35682301 0.93417202 0.00000000 0.93417202 0.35682301 transform to point frame 0.00000 0.00000 0.00000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 1_555 x,y,z identity operation 0.00000 0.00000 0.00000 0.30901699 -0.75576189 0.57734953 0.75576187 0.56366035 0.33333315 -0.57734952 0.33333315 0.74535664 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 -0.46708653 0.35682164 0.46708652 -0.14235203 0.87267753 -0.35682163 0.87267753 0.33333504 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 0.46708653 -0.35682164 -0.46708652 -0.14235203 0.87267753 0.35682163 0.87267753 0.33333504 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 0.75576189 -0.57734953 -0.75576187 0.56366035 0.33333315 0.57734952 0.33333315 0.74535664 point symmetry operation 0.00000 0.00000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000000 0.74535469 0.66666813 0.00000000 0.66666813 -0.74535469 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 0.75576189 -0.57734953 0.17841013 0.64234947 0.74535694 0.93417252 0.12732296 -0.33333248 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 0.46708653 -0.35682164 0.11026352 0.47568353 0.87267813 0.57735037 -0.74535585 0.33333345 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 -0.46708653 0.35682164 -0.11026352 0.47568353 0.87267813 -0.57735037 -0.74535585 0.33333345 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 -0.75576189 0.57734953 -0.17841013 0.64234947 0.74535694 -0.93417252 0.12732296 -0.33333248 point symmetry operation 0.00000 0.00000 0.00000 -1.00000000 0.00000000 0.00000000 0.00000000 -0.74535469 -0.66666813 0.00000000 -0.66666813 0.74535469 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 0.75576189 -0.57734953 -0.17841013 -0.64234947 -0.74535694 -0.93417252 -0.12732296 0.33333248 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 0.46708653 -0.35682164 -0.11026352 -0.47568353 -0.87267813 -0.57735037 0.74535585 -0.33333345 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 -0.46708653 0.35682164 0.11026352 -0.47568353 -0.87267813 0.57735037 0.74535585 -0.33333345 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 -0.75576189 0.57734953 0.17841013 -0.64234947 -0.74535694 0.93417252 -0.12732296 0.33333248 point symmetry operation 0.00000 0.00000 0.00000 1.00000000 0.00000000 0.00000000 0.00000000 -1.00000000 0.00000000 0.00000000 0.00000000 -1.00000000 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 -0.75576189 0.57734953 -0.75576187 -0.56366035 -0.33333315 0.57734952 -0.33333315 -0.74535664 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 -0.46708653 0.35682164 -0.46708652 0.14235203 -0.87267753 0.35682163 -0.87267753 -0.33333504 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 0.46708653 -0.35682164 0.46708652 0.14235203 -0.87267753 -0.35682163 -0.87267753 -0.33333504 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 0.75576189 -0.57734953 0.75576187 -0.56366035 -0.33333315 -0.57734952 -0.33333315 -0.74535664 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 -0.93417202 -0.35682301 0.35682300 -0.33333406 0.87267734 -0.93417200 -0.12732266 0.33333406 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 -0.64549666 -0.57735090 -0.64549665 -0.16666813 0.74535615 -0.57735089 0.74535615 -0.33333187 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 -0.17841013 -0.93417254 -0.75576187 0.64234947 0.12732296 0.57734952 0.74535694 -0.33333248 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 -0.17841013 -0.93417254 0.17841013 0.97568390 -0.12732137 0.93417252 -0.12732137 0.33333309 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 -0.64549666 -0.57735090 0.86602539 0.37267832 0.33333297 0.00000000 -0.66666703 0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 -0.93417202 -0.35682301 -0.35682300 0.33333406 -0.87267734 0.93417200 0.12732266 -0.33333406 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 -0.64549666 -0.57735090 0.64549665 0.16666813 -0.74535615 0.57735089 -0.74535615 0.33333187 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 -0.17841013 -0.93417254 0.75576187 -0.64234947 -0.12732296 -0.57734952 -0.74535694 0.33333248 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 -0.17841013 -0.93417254 -0.17841013 -0.97568390 0.12732137 -0.93417252 0.12732137 -0.33333309 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 -0.64549666 -0.57735090 -0.86602539 -0.37267832 -0.33333297 0.00000000 0.66666703 -0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 0.93417202 0.35682301 -0.35682300 -0.33333406 0.87267734 0.93417200 -0.12732266 0.33333406 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 0.64549666 0.57735090 -0.86602539 0.37267832 0.33333297 0.00000000 -0.66666703 0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 0.17841013 0.93417254 -0.17841013 0.97568390 -0.12732137 -0.93417252 -0.12732137 0.33333309 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 0.17841013 0.93417254 0.75576187 0.64234947 0.12732296 -0.57734952 0.74535694 -0.33333248 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 0.64549666 0.57735090 0.64549665 -0.16666813 0.74535615 0.57735089 0.74535615 -0.33333187 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 0.93417202 0.35682301 0.35682300 0.33333406 -0.87267734 -0.93417200 0.12732266 -0.33333406 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 0.64549666 0.57735090 0.86602539 -0.37267832 -0.33333297 0.00000000 0.66666703 -0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.30901699 0.17841013 0.93417254 0.17841013 -0.97568390 0.12732137 0.93417252 0.12732137 -0.33333309 point symmetry operation 0.00000 0.00000 0.00000 -0.30901699 0.17841013 0.93417254 -0.75576187 -0.64234947 -0.12732296 0.57734952 -0.74535694 0.33333248 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 0.64549666 0.57735090 -0.64549665 0.16666813 -0.74535615 -0.57735089 -0.74535615 0.33333187 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 0.35682301 -0.93417202 -0.93417200 -0.33333406 -0.12732266 -0.35682300 0.87267734 0.33333406 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 -0.11026352 -0.57735038 -0.46708652 0.47568354 -0.74535585 0.35682163 0.87267813 0.33333346 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 -0.86602541 0.00000000 0.64549665 0.37267832 -0.66666703 0.57735089 0.33333297 0.74535566 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 -0.86602541 0.00000000 0.86602539 -0.50000000 -0.00000147 0.00000000 -0.00000147 1.00000000 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 -0.11026352 -0.57735038 -0.11026352 -0.93633965 0.33333168 -0.57735037 0.33333168 0.74535664 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 -0.35682301 0.93417202 0.93417200 -0.33333406 -0.12732266 0.35682300 0.87267734 0.33333406 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 0.11026352 0.57735038 0.11026352 -0.93633965 0.33333168 0.57735037 0.33333168 0.74535664 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 0.86602541 0.00000000 -0.86602539 -0.50000000 -0.00000147 0.00000000 -0.00000147 1.00000000 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 0.86602541 0.00000000 -0.64549665 0.37267832 -0.66666703 -0.57735089 0.33333297 0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 0.11026352 0.57735038 0.46708652 0.47568354 -0.74535585 -0.35682163 0.87267813 0.33333346 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 0.35682301 -0.93417202 0.93417200 0.33333406 0.12732266 0.35682300 -0.87267734 -0.33333406 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 -0.11026352 -0.57735038 0.46708652 -0.47568354 0.74535585 -0.35682163 -0.87267813 -0.33333346 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 -0.86602541 0.00000000 -0.64549665 -0.37267832 0.66666703 -0.57735089 -0.33333297 -0.74535566 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 -0.86602541 0.00000000 -0.86602539 0.50000000 0.00000147 0.00000000 0.00000147 -1.00000000 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 -0.11026352 -0.57735038 0.11026352 0.93633965 -0.33333168 0.57735037 -0.33333168 -0.74535664 point symmetry operation 0.00000 0.00000 0.00000 0.00000000 -0.35682301 0.93417202 -0.93417200 0.33333406 0.12732266 -0.35682300 -0.87267734 -0.33333406 point symmetry operation 0.00000 0.00000 0.00000 -0.80901699 0.11026352 0.57735038 -0.11026352 0.93633965 -0.33333168 -0.57735037 -0.33333168 -0.74535664 point symmetry operation 0.00000 0.00000 0.00000 -0.50000000 0.86602541 0.00000000 0.86602539 0.50000000 0.00000147 0.00000000 0.00000147 -1.00000000 point symmetry operation 0.00000 0.00000 0.00000 0.50000000 0.86602541 0.00000000 0.64549665 -0.37267832 0.66666703 0.57735089 -0.33333297 -0.74535566 point symmetry operation 0.00000 0.00000 0.00000 0.80901699 0.11026352 0.57735038 -0.46708652 -0.47568354 0.74535585 0.35682163 -0.87267813 -0.33333346 point symmetry operation 0.00000 0.00000 0.00000 A O SER 84 A O SER 80 A N VAL 64 A N VAL 64 A O LYS 57 A O LYS 57 A N ARG 49 A N ARG 49 A O VAL 44 A O VAL 44 A N TRP 32 A N TRP 32 A O GLU 31 A O GLU 31 A N ASN 24 A N ASN 24 A O PHE 7 A O PHE 7 A N VAL 20 A N VAL 20 B O SER 84 B O SER 80 B N VAL 64 B N VAL 64 B O LYS 57 B O LYS 57 B N ARG 49 B N ARG 49 B O VAL 44 B O VAL 44 B N TRP 32 B N TRP 32 B O GLU 31 B O GLU 31 B N ASN 24 B N ASN 24 B O PHE 7 B O PHE 7 B N VAL 20 B N VAL 20 C O ALA 81 C O ALA 77 C N LYS 66 C N LYS 66 C O LYS 57 C O LYS 57 C N ARG 49 C N ARG 49 C O VAL 44 C O VAL 44 C N TRP 32 C N TRP 32 C O GLU 31 C O GLU 31 C N ASN 24 C N ASN 24 C O VAL 18 C O VAL 18 C N VAL 10 C N VAL 10 1 B THR 73 B THR 69 1 Y 1 B GLY 74 B GLY 70 1 Y 1 B VAL 75 B VAL 71 1 Y 1 B GLU 76 B GLU 72 1 Y 1 B LEU 77 B LEU 73 1 Y 1 B PRO 78 B PRO 74 1 Y 1 B VAL 79 B VAL 75 1 Y 1 B ALA 80 B ALA 76 1 Y 1 B ALA 81 B ALA 77 1 Y 1 -24.62 2.10 128.40 103.78 B B B C N CD ASN PRO PRO 116 117 117 Y 1 7.24 1.10 114.20 121.44 C C C CA CB SG CYS CYS CYS 46 46 46 N 1 A SER 51 -58.71 -85.32 1 A VAL 75 -155.26 -20.88 1 A GLU 76 84.89 -59.56 1 A PRO 117 -24.50 -73.62 1 B SER 2 153.30 119.23 1 B PHE 4 -50.63 94.36 1 B ARG 49 -176.44 138.97 1 B SER 51 -78.81 -89.88 1 B PRO 93 -49.47 154.93 1 B PRO 117 -7.48 -79.56 1 C SER 2 179.50 145.51 1 C PHE 4 -85.24 46.85 1 C THR 15 -85.62 -120.78 1 C ALA 26 -71.71 -120.30 1 C ASN 36 72.03 171.89 1 C SER 37 -30.96 113.20 1 C SER 51 -81.90 -107.06 1 C GLU 76 76.40 -45.56 1 C PHE 95 -66.43 6.56 1 C PRO 117 -33.59 -76.04 PARHCSDX.PRO TOPHCSDX.PRO 0.256 0.256 3.5 30.0 51856 47.8 1 RESTRAINED MOLECULAR REPLACEMENT PDB ENTRY 1FRS 3.5 30.0 0 2752 0 0 2752 0.016 1.7 26.2 1.29 1 CONSTRAINTS 1 X-RAY DIFFRACTION 0.351 3.56 1320 20 26.0 3.50 20. 1FR5 52800 -3 0.139 1 6.9 48 0.387 3.50 3.56 26 model building X-PLOR refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing X-PLOR PHAGE FR CAPSIDS WITH A FOUR RESIDUE DELETION IN THE COAT PROTEIN FG LOOP 1 N N 1 N N 1 N N A ALA 26 A ALA 26 HELX_P A GLY 28 A GLY 28 5 1 3 A ARG 38 A ARG 38 HELX_P A GLN 40 A GLN 40 5 2 3 A ASN 98 A ASN 94 HELX_P A THR 111 A THR 107 1 3 14 A PRO 117 A PRO 113 HELX_P A ALA 124 A ALA 120 1 4 8 B ARG 38 B ARG 38 HELX_P B GLN 40 B GLN 40 5 5 3 B ASN 98 B ASN 94 HELX_P B PHE 112 B PHE 108 1 6 15 B PRO 117 B PRO 113 HELX_P B ALA 124 B ALA 120 1 7 8 C ARG 38 C ARG 38 HELX_P C GLN 40 C GLN 40 5 8 3 C ASN 98 C ASN 94 HELX_P C PHE 112 C PHE 108 1 9 15 C PRO 117 C PRO 113 HELX_P C ALA 124 C ALA 120 1 10 8 VIRUS VIRAL COAT PROTEIN, CAPSID, Icosahedral virus, Virus given 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000000 0.00000000 0.00000000 1.00000000 0.00000 0.00000 0.00000 generate 0.30901699 -0.75576189 0.57734953 0.75576187 0.56366035 0.33333315 -0.57734952 0.33333315 0.74535664 0.00000 0.00000 0.00000 generate -0.80901699 -0.46708653 0.35682164 0.46708652 -0.14235203 0.87267753 -0.35682163 0.87267753 0.33333504 0.00000 0.00000 0.00000 generate -0.80901699 0.46708653 -0.35682164 -0.46708652 -0.14235203 0.87267753 0.35682163 0.87267753 0.33333504 0.00000 0.00000 0.00000 generate 0.30901699 0.75576189 -0.57734953 -0.75576187 0.56366035 0.33333315 0.57734952 0.33333315 0.74535664 0.00000 0.00000 0.00000 generate -1.00000000 0.00000000 0.00000000 0.00000000 0.74535469 0.66666813 0.00000000 0.66666813 -0.74535469 0.00000 0.00000 0.00000 generate -0.30901699 0.75576189 -0.57734953 0.17841013 0.64234947 0.74535694 0.93417252 0.12732296 -0.33333248 0.00000 0.00000 0.00000 generate 0.80901699 0.46708653 -0.35682164 0.11026352 0.47568353 0.87267813 0.57735037 -0.74535585 0.33333345 0.00000 0.00000 0.00000 generate 0.80901699 -0.46708653 0.35682164 -0.11026352 0.47568353 0.87267813 -0.57735037 -0.74535585 0.33333345 0.00000 0.00000 0.00000 generate -0.30901699 -0.75576189 0.57734953 -0.17841013 0.64234947 0.74535694 -0.93417252 0.12732296 -0.33333248 0.00000 0.00000 0.00000 COAT_BPFR UNP 1 1 P03614 ASNFEEFVLVDNGGTGDVKVAPSNFANGVAEWISSNSRSQAYKVTCSVRQSSANNRKYTVKVEVPKVATQVQGGVELPVA AWRSYMNMELTIPVFATNDDCALIVKALQGTFKTGNPIATAIAANSGIY 1 129 1FR5 1 129 P03614 A 1 1 125 1 129 1FR5 1 129 P03614 B 1 1 125 1 129 1FR5 1 129 P03614 C 1 1 125 1 GLN deletion 1FR5 A P03614 UNP 70 1 VAL deletion 1FR5 A P03614 UNP 71 1 GLN deletion 1FR5 A P03614 UNP 72 1 GLY deletion 1FR5 A P03614 UNP 73 2 GLN deletion 1FR5 B P03614 UNP 70 2 VAL deletion 1FR5 B P03614 UNP 71 2 GLN deletion 1FR5 B P03614 UNP 72 2 GLY deletion 1FR5 B P03614 UNP 73 3 GLN deletion 1FR5 C P03614 UNP 70 3 VAL deletion 1FR5 C P03614 UNP 71 3 GLN deletion 1FR5 C P03614 UNP 72 3 GLY deletion 1FR5 C P03614 UNP 73 5 2 5 2 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ARG 83 A ARG 79 A PRO 93 A PRO 89 A ASN 55 A ASN 55 A PRO 65 A PRO 65 A LYS 43 A LYS 43 A ARG 49 A ARG 49 A ALA 30 A ALA 30 A ILE 33 A ILE 33 A ALA 21 A ALA 21 A ASN 24 A ASN 24 A PHE 7 A PHE 7 A VAL 10 A VAL 10 A VAL 18 A VAL 18 A VAL 20 A VAL 20 B SER 84 B SER 80 B PRO 93 B PRO 89 B ASN 55 B ASN 55 B VAL 64 B VAL 64 B LYS 43 B LYS 43 B GLN 50 B GLN 50 B ALA 30 B ALA 30 B ILE 33 B ILE 33 B ALA 21 B ALA 21 B ASN 24 B ASN 24 B PHE 7 B PHE 7 B VAL 10 B VAL 10 B VAL 18 B VAL 18 B VAL 20 B VAL 20 C ALA 80 C ALA 76 C PRO 93 C PRO 89 C ASN 55 C ASN 55 C VAL 67 C VAL 67 C LYS 43 C LYS 43 C GLN 50 C GLN 50 C ALA 30 C ALA 30 C SER 34 C SER 34 C VAL 18 C VAL 18 C PHE 25 C PHE 25 C PHE 7 C PHE 7 C VAL 10 C VAL 10 155 H 3 2