0.039180
0.000000
0.001830
0.000000
0.023150
0.000000
0.000000
0.000000
0.016480
0.00000
0.00000
0.00000
Audette, G.F.
Engelmann, R.
Hengstenberg, W.
Deutscher, J.
Hayakawa, K.
Quail, J.W.
Delbaere, L.T.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
92.67
90.00
25.520
43.200
60.750
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H8 N O6 P
185.072
n
PHOSPHOSERINE
PHOSPHONOSERINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
303
545
553
10.1006/jmbi.2000.4166
11054290
The 1.9 A resolution structure of phospho-serine 46 HPr from Enterococcus faecalis.
2000
10.2210/pdb1fu0/pdb
pdb_00001fu0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
290.0
1
DIFFRACTOMETER
1998-12-14
WEISSENBERG
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
BL-18B
Photon Factory
1.000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-18B
9281.466
PHOSPHOCARRIER PROTEIN HPR
2
nat
polymer
18.015
water
91
nat
water
HISTIDINE-CONTAINING PROTEIN, HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN, HPR
no
yes
MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLK(SEP)IMGVMSLGVGQGSDVTITVDGADEAEGMAA
IVETLQKEGLA
MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVET
LQKEGLA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Enterococcus
sample
1351
Enterococcus faecalis
26487
1
1.80
31.74
VAPOR DIFFUSION, HANGING DROP
4.2
2.8M sodium-potassium phosphate, pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 287.0K
287.0
database_2
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2000-11-22
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-12-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
The native HPr from Enterococcus faecalis
RCSB
Y
RCSB
2000-09-13
REL
REL
HOH
water
HOH
201
2
HOH
HOH
201
A
HOH
204
2
HOH
HOH
204
A
HOH
205
2
HOH
HOH
205
A
HOH
206
2
HOH
HOH
206
A
HOH
207
2
HOH
HOH
207
A
HOH
208
2
HOH
HOH
208
A
HOH
209
2
HOH
HOH
209
A
HOH
210
2
HOH
HOH
210
A
HOH
211
2
HOH
HOH
211
A
HOH
212
2
HOH
HOH
212
A
HOH
218
2
HOH
HOH
218
A
HOH
223
2
HOH
HOH
223
A
HOH
226
2
HOH
HOH
226
A
HOH
228
2
HOH
HOH
228
A
HOH
229
2
HOH
HOH
229
A
HOH
230
2
HOH
HOH
230
A
HOH
232
2
HOH
HOH
232
A
HOH
233
2
HOH
HOH
233
A
HOH
234
2
HOH
HOH
234
A
HOH
235
2
HOH
HOH
235
A
HOH
237
2
HOH
HOH
237
A
HOH
238
2
HOH
HOH
238
A
HOH
239
2
HOH
HOH
239
A
HOH
244
2
HOH
HOH
244
A
HOH
245
2
HOH
HOH
245
A
HOH
255
2
HOH
HOH
255
A
HOH
256
2
HOH
HOH
256
A
HOH
257
2
HOH
HOH
257
A
HOH
263
2
HOH
HOH
263
A
HOH
265
2
HOH
HOH
265
A
HOH
268
2
HOH
HOH
268
A
HOH
269
2
HOH
HOH
269
A
HOH
270
2
HOH
HOH
270
A
HOH
271
2
HOH
HOH
271
A
HOH
272
2
HOH
HOH
272
A
HOH
275
2
HOH
HOH
275
A
HOH
276
2
HOH
HOH
276
A
HOH
277
2
HOH
HOH
277
A
HOH
278
2
HOH
HOH
278
A
HOH
279
2
HOH
HOH
279
A
HOH
280
2
HOH
HOH
280
A
HOH
281
2
HOH
HOH
281
A
HOH
282
2
HOH
HOH
282
A
HOH
202
2
HOH
HOH
202
B
HOH
203
2
HOH
HOH
203
B
HOH
213
2
HOH
HOH
213
B
HOH
214
2
HOH
HOH
214
B
HOH
215
2
HOH
HOH
215
B
HOH
216
2
HOH
HOH
216
B
HOH
217
2
HOH
HOH
217
B
HOH
219
2
HOH
HOH
219
B
HOH
220
2
HOH
HOH
220
B
HOH
221
2
HOH
HOH
221
B
HOH
222
2
HOH
HOH
222
B
HOH
224
2
HOH
HOH
224
B
HOH
225
2
HOH
HOH
225
B
HOH
227
2
HOH
HOH
227
B
HOH
231
2
HOH
HOH
231
B
HOH
236
2
HOH
HOH
236
B
HOH
240
2
HOH
HOH
240
B
HOH
241
2
HOH
HOH
241
B
HOH
242
2
HOH
HOH
242
B
HOH
243
2
HOH
HOH
243
B
HOH
246
2
HOH
HOH
246
B
HOH
247
2
HOH
HOH
247
B
HOH
248
2
HOH
HOH
248
B
HOH
249
2
HOH
HOH
249
B
HOH
250
2
HOH
HOH
250
B
HOH
251
2
HOH
HOH
251
B
HOH
252
2
HOH
HOH
252
B
HOH
253
2
HOH
HOH
253
B
HOH
254
2
HOH
HOH
254
B
HOH
258
2
HOH
HOH
258
B
HOH
259
2
HOH
HOH
259
B
HOH
260
2
HOH
HOH
260
B
HOH
261
2
HOH
HOH
261
B
HOH
262
2
HOH
HOH
262
B
HOH
264
2
HOH
HOH
264
B
HOH
266
2
HOH
HOH
266
B
HOH
267
2
HOH
HOH
267
B
HOH
273
2
HOH
HOH
273
B
HOH
274
2
HOH
HOH
274
B
HOH
283
2
HOH
HOH
283
B
HOH
284
2
HOH
HOH
284
B
HOH
285
2
HOH
HOH
285
B
HOH
286
2
HOH
HOH
286
B
HOH
287
2
HOH
HOH
287
B
HOH
288
2
HOH
HOH
288
B
HOH
289
2
HOH
HOH
289
B
HOH
290
2
HOH
HOH
290
B
HOH
291
2
HOH
HOH
291
B
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
LYS
3
n
3
LYS
3
A
LYS
4
n
4
LYS
4
A
GLU
5
n
5
GLU
5
A
PHE
6
n
6
PHE
6
A
HIS
7
n
7
HIS
7
A
ILE
8
n
8
ILE
8
A
VAL
9
n
9
VAL
9
A
ALA
10
n
10
ALA
10
A
GLU
11
n
11
GLU
11
A
THR
12
n
12
THR
12
A
GLY
13
n
13
GLY
13
A
ILE
14
n
14
ILE
14
A
HIS
15
n
15
HIS
15
A
ALA
16
n
16
ALA
16
A
ARG
17
n
17
ARG
17
A
PRO
18
n
18
PRO
18
A
ALA
19
n
19
ALA
19
A
THR
20
n
20
THR
20
A
LEU
21
n
21
LEU
21
A
LEU
22
n
22
LEU
22
A
VAL
23
n
23
VAL
23
A
GLN
24
n
24
GLN
24
A
THR
25
n
25
THR
25
A
ALA
26
n
26
ALA
26
A
SER
27
n
27
SER
27
A
LYS
28
n
28
LYS
28
A
PHE
29
n
29
PHE
29
A
ASN
30
n
30
ASN
30
A
SER
31
n
31
SER
31
A
ASP
32
n
32
ASP
32
A
ILE
33
n
33
ILE
33
A
ASN
34
n
34
ASN
34
A
LEU
35
n
35
LEU
35
A
GLU
36
n
36
GLU
36
A
TYR
37
n
37
TYR
37
A
LYS
38
n
38
LYS
38
A
GLY
39
n
39
GLY
39
A
LYS
40
n
40
LYS
40
A
SER
41
n
41
SER
41
A
VAL
42
n
42
VAL
42
A
ASN
43
n
43
ASN
43
A
LEU
44
n
44
LEU
44
A
LYS
45
n
45
LYS
45
A
SEP
46
n
46
SEP
46
A
ILE
47
n
47
ILE
47
A
MET
48
n
48
MET
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
MET
51
n
51
MET
51
A
SER
52
n
52
SER
52
A
LEU
53
n
53
LEU
53
A
GLY
54
n
54
GLY
54
A
VAL
55
n
55
VAL
55
A
GLY
56
n
56
GLY
56
A
GLN
57
n
57
GLN
57
A
GLY
58
n
58
GLY
58
A
SER
59
n
59
SER
59
A
ASP
60
n
60
ASP
60
A
VAL
61
n
61
VAL
61
A
THR
62
n
62
THR
62
A
ILE
63
n
63
ILE
63
A
THR
64
n
64
THR
64
A
VAL
65
n
65
VAL
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ALA
68
n
68
ALA
68
A
ASP
69
n
69
ASP
69
A
GLU
70
n
70
GLU
70
A
ALA
71
n
71
ALA
71
A
GLU
72
n
72
GLU
72
A
GLY
73
n
73
GLY
73
A
MET
74
n
74
MET
74
A
ALA
75
n
75
ALA
75
A
ALA
76
n
76
ALA
76
A
ILE
77
n
77
ILE
77
A
VAL
78
n
78
VAL
78
A
GLU
79
n
79
GLU
79
A
THR
80
n
80
THR
80
A
LEU
81
n
81
LEU
81
A
GLN
82
n
82
GLN
82
A
LYS
83
n
83
LYS
83
A
GLU
84
n
84
GLU
84
A
GLY
85
n
85
GLY
85
A
LEU
86
n
86
LEU
86
A
ALA
87
n
87
ALA
87
A
MET
101
n
1
MET
101
B
GLU
102
n
2
GLU
102
B
LYS
103
n
3
LYS
103
B
LYS
104
n
4
LYS
104
B
GLU
105
n
5
GLU
105
B
PHE
106
n
6
PHE
106
B
HIS
107
n
7
HIS
107
B
ILE
108
n
8
ILE
108
B
VAL
109
n
9
VAL
109
B
ALA
110
n
10
ALA
110
B
GLU
111
n
11
GLU
111
B
THR
112
n
12
THR
112
B
GLY
113
n
13
GLY
113
B
ILE
114
n
14
ILE
114
B
HIS
115
n
15
HIS
115
B
ALA
116
n
16
ALA
116
B
ARG
117
n
17
ARG
117
B
PRO
118
n
18
PRO
118
B
ALA
119
n
19
ALA
119
B
THR
120
n
20
THR
120
B
LEU
121
n
21
LEU
121
B
LEU
122
n
22
LEU
122
B
VAL
123
n
23
VAL
123
B
GLN
124
n
24
GLN
124
B
THR
125
n
25
THR
125
B
ALA
126
n
26
ALA
126
B
SER
127
n
27
SER
127
B
LYS
128
n
28
LYS
128
B
PHE
129
n
29
PHE
129
B
ASN
130
n
30
ASN
130
B
SER
131
n
31
SER
131
B
ASP
132
n
32
ASP
132
B
ILE
133
n
33
ILE
133
B
ASN
134
n
34
ASN
134
B
LEU
135
n
35
LEU
135
B
GLU
136
n
36
GLU
136
B
TYR
137
n
37
TYR
137
B
LYS
138
n
38
LYS
138
B
GLY
139
n
39
GLY
139
B
LYS
140
n
40
LYS
140
B
SER
141
n
41
SER
141
B
VAL
142
n
42
VAL
142
B
ASN
143
n
43
ASN
143
B
LEU
144
n
44
LEU
144
B
LYS
145
n
45
LYS
145
B
SEP
146
n
46
SEP
146
B
ILE
147
n
47
ILE
147
B
MET
148
n
48
MET
148
B
GLY
149
n
49
GLY
149
B
VAL
150
n
50
VAL
150
B
MET
151
n
51
MET
151
B
SER
152
n
52
SER
152
B
LEU
153
n
53
LEU
153
B
GLY
154
n
54
GLY
154
B
VAL
155
n
55
VAL
155
B
GLY
156
n
56
GLY
156
B
GLN
157
n
57
GLN
157
B
GLY
158
n
58
GLY
158
B
SER
159
n
59
SER
159
B
ASP
160
n
60
ASP
160
B
VAL
161
n
61
VAL
161
B
THR
162
n
62
THR
162
B
ILE
163
n
63
ILE
163
B
THR
164
n
64
THR
164
B
VAL
165
n
65
VAL
165
B
ASP
166
n
66
ASP
166
B
GLY
167
n
67
GLY
167
B
ALA
168
n
68
ALA
168
B
ASP
169
n
69
ASP
169
B
GLU
170
n
70
GLU
170
B
ALA
171
n
71
ALA
171
B
GLU
172
n
72
GLU
172
B
GLY
173
n
73
GLY
173
B
MET
174
n
74
MET
174
B
ALA
175
n
75
ALA
175
B
ALA
176
n
76
ALA
176
B
ILE
177
n
77
ILE
177
B
VAL
178
n
78
VAL
178
B
GLU
179
n
79
GLU
179
B
THR
180
n
80
THR
180
B
LEU
181
n
81
LEU
181
B
GLN
182
n
82
GLN
182
B
LYS
183
n
83
LYS
183
B
GLU
184
n
84
GLU
184
B
GLY
185
n
85
GLY
185
B
LEU
186
n
86
LEU
186
B
ALA
187
n
87
ALA
187
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
A
SEP
46
PHOSPHOSERINE
A
SEP
46
SER
B
SEP
146
PHOSPHOSERINE
B
SEP
46
SER
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
6
A
N
PHE
6
A
O
VAL
61
A
O
VAL
61
A
O
ASP
66
A
O
ASP
66
A
N
ASP
32
A
N
ASP
32
A
N
TYR
37
A
N
TYR
37
A
O
LYS
40
A
O
LYS
40
B
N
PHE
106
B
N
PHE
6
B
O
VAL
161
B
O
VAL
61
B
O
ASP
166
B
O
ASP
66
B
N
ASP
132
B
N
ASP
32
B
N
TYR
137
B
N
TYR
37
B
O
LYS
140
B
O
LYS
40
1
A
ALA
16
57.65
-141.76
1
B
ALA
116
63.52
-154.30
Simulated Annealing
0.2390000
0.1780000
0.1780000
0.1780000
1.90
40.0
496
10043
10043
5.0
100
RANDOM
1
THROUGHOUT
0.0
0.0
Engh & Huber
1.90
40.0
91
1383
0
0
1292
0.01
1.59
22.93
1.15
14.8
1.90
40.0
1FU0
10043
10043
0.0410000
1
8.6
4.23
95.1
0.1100000
1.90
1.93
447
3.7
84.3
phasing
AMoRE
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE ANALYSIS OF THE PHOSPHO-SERINE 46 HPR FROM ENTEROCOCCUS FAECALIS
1
N
N
1
N
N
2
N
N
2
N
N
The biological assembly is a monomer
A
HIS
15
A
HIS
15
HELX_P
A
LYS
28
A
LYS
28
1
1
14
A
ILE
47
A
ILE
47
HELX_P
A
GLY
54
A
GLY
54
1
2
8
A
ASP
69
A
ASP
69
HELX_P
A
GLU
84
A
GLU
84
1
3
16
B
HIS
115
B
HIS
15
HELX_P
B
LYS
128
B
LYS
28
1
4
14
B
ILE
147
B
ILE
47
HELX_P
B
GLY
154
B
GLY
54
1
5
8
B
ASP
169
B
ASP
69
HELX_P
B
GLU
184
B
GLU
84
1
6
16
covale
1.334
both
A
LYS
45
A
C
LYS
45
1_555
A
SEP
46
A
N
SEP
46
1_555
covale
1.329
both
A
SEP
46
A
C
SEP
46
1_555
A
ILE
47
A
N
ILE
47
1_555
covale
1.333
both
B
LYS
145
B
C
LYS
45
1_555
B
SEP
146
B
N
SEP
46
1_555
covale
1.322
both
B
SEP
146
B
C
SEP
46
1_555
B
ILE
147
B
N
ILE
47
1_555
SIGNALING PROTEIN
Phospho-Serine HPr, PTS System, SIGNALING PROTEIN
given
-0.998720
0.020550
0.046230
0.015950
0.995090
-0.097690
-0.048010
-0.096820
-0.994140
11.08700
-23.54104
32.35572
PTHP_ENTFA
UNP
1
1
P07515
MEKKEFHIVAETGIHARPATLLVQTASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGSDVTITVDGADEAEGMAAIVET
LQKEGLA
1
87
1FU0
1
87
P07515
A
1
1
87
1
87
1FU0
101
187
P07515
B
1
1
87
1
SER
modified residue
SEP
46
1FU0
A
P07515
UNP
46
46
2
SER
modified residue
SEP
146
1FU0
B
P07515
UNP
46
46
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
2
A
GLU
2
A
HIS
7
A
HIS
7
A
ASP
60
A
ASP
60
A
ASP
66
A
ASP
66
A
ASP
32
A
ASP
32
A
TYR
37
A
TYR
37
A
LYS
40
A
LYS
40
A
ASN
43
A
ASN
43
B
GLU
102
B
GLU
2
B
HIS
107
B
HIS
7
B
ASP
160
B
ASP
60
B
ASP
166
B
ASP
66
B
ASP
132
B
ASP
32
B
TYR
137
B
TYR
37
B
LYS
140
B
LYS
40
B
ASN
143
B
ASN
43
4
monoclinic
P 1 21 1