1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Weber, T.
Schaffhausen, B.
Liu, Y.
Guenther, U.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
15860
15869
10.1021/bi001474d
11123912
NMR structure of the N-SH2 of the p85 subunit of phosphoinositide 3-kinase complexed to a doubly phosphorylated peptide reveals a second phosphotyrosine binding site.
2000
10.2210/pdb1fu6/pdb
pdb_00001fu6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
12870.384
PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY ALPHA SUBUNIT
RESIDUES 321 TO 431 OF P85, N-SH2 (SRC HOMOLOGY 2) DOMAIN
1
man
polymer
N-SH2 (SRC HOMOLOGY 2) DOMAIN OF P85 SUBUNIT OF P13-KINASE (PHOSPHOINOSITOL 3-KINASE), PI3-KINASE P85-ALPHA SUBUNIT, PTDINS-3-KINASE P85-ALPHA, PI3K
no
no
GMNNNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNS
VVELINHYRNESLAQYNPKLDVKLLYPVSKY
GMNNNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGKYGFSDPLTFNS
VVELINHYRNESLAQYNPKLDVKLLYPVSKY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
sample
10116
Rattus norvegicus
562
Escherichia coli
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-02-21
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
1FU5 is NMR Structure of the N-SH2 DOMAIN of the p85 Subunit of PI3-kinase Complexed to a Doubly Phosphorylated Peptide Derived from Polyomavirus Middle T Antigen
RCSB
Y
RCSB
2000-09-14
REL
NOESY assignments were obtained by a semi-automatic procedure employing a program from Pristovsek [Pristovsek, P. & Kidric, J. (1997) Biopol. 42, 671-679)].
structures with favorable non-bond energy
110
1
3D_13C-separated_NOESY
3D_15N-separated_NOESY
2D NOESY
0.1mM
6.8
1
bar
305
K
The structure with the lowest energy is presented.
The structures were energy minimized with MSI DISCOVER.
1
lowest energy
1.5mM N-SH2 15N, 13C; 0.1mM KCl; 95% H2O, 5% D2O
95% H2O/5% D2O
Ulrich Guenther, Christian Ludwig and Heinz Rueterjans
processing
NMRLAB
M. Kjaer
data analysis
Pronto
P. Pristovsek
data analysis
nmr2st
P. Guentert
structure solution
DYANA
MSI
refinement
Discover
500
Bruker
DMX
600
Bruker
DMX
GLY
1
n
1
GLY
1
A
MET
2
n
2
MET
2
A
ASN
3
n
3
ASN
3
A
ASN
4
n
4
ASN
4
A
ASN
5
n
5
ASN
5
A
MET
6
n
6
MET
6
A
SER
7
n
7
SER
7
A
LEU
8
n
8
LEU
8
A
GLN
9
n
9
GLN
9
A
ASP
10
n
10
ASP
10
A
ALA
11
n
11
ALA
11
A
GLU
12
n
12
GLU
12
A
TRP
13
n
13
TRP
13
A
TYR
14
n
14
TYR
14
A
TRP
15
n
15
TRP
15
A
GLY
16
n
16
GLY
16
A
ASP
17
n
17
ASP
17
A
ILE
18
n
18
ILE
18
A
SER
19
n
19
SER
19
A
ARG
20
n
20
ARG
20
A
GLU
21
n
21
GLU
21
A
GLU
22
n
22
GLU
22
A
VAL
23
n
23
VAL
23
A
ASN
24
n
24
ASN
24
A
GLU
25
n
25
GLU
25
A
LYS
26
n
26
LYS
26
A
LEU
27
n
27
LEU
27
A
ARG
28
n
28
ARG
28
A
ASP
29
n
29
ASP
29
A
THR
30
n
30
THR
30
A
ALA
31
n
31
ALA
31
A
ASP
32
n
32
ASP
32
A
GLY
33
n
33
GLY
33
A
THR
34
n
34
THR
34
A
PHE
35
n
35
PHE
35
A
LEU
36
n
36
LEU
36
A
VAL
37
n
37
VAL
37
A
ARG
38
n
38
ARG
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
SER
41
n
41
SER
41
A
THR
42
n
42
THR
42
A
LYS
43
n
43
LYS
43
A
MET
44
n
44
MET
44
A
HIS
45
n
45
HIS
45
A
GLY
46
n
46
GLY
46
A
ASP
47
n
47
ASP
47
A
TYR
48
n
48
TYR
48
A
THR
49
n
49
THR
49
A
LEU
50
n
50
LEU
50
A
THR
51
n
51
THR
51
A
LEU
52
n
52
LEU
52
A
ARG
53
n
53
ARG
53
A
LYS
54
n
54
LYS
54
A
GLY
55
n
55
GLY
55
A
GLY
56
n
56
GLY
56
A
ASN
57
n
57
ASN
57
A
ASN
58
n
58
ASN
58
A
LYS
59
n
59
LYS
59
A
SER
60
n
60
SER
60
A
ILE
61
n
61
ILE
61
A
LYS
62
n
62
LYS
62
A
ILE
63
n
63
ILE
63
A
PHE
64
n
64
PHE
64
A
HIS
65
n
65
HIS
65
A
ARG
66
n
66
ARG
66
A
ASP
67
n
67
ASP
67
A
GLY
68
n
68
GLY
68
A
LYS
69
n
69
LYS
69
A
TYR
70
n
70
TYR
70
A
GLY
71
n
71
GLY
71
A
PHE
72
n
72
PHE
72
A
SER
73
n
73
SER
73
A
ASP
74
n
74
ASP
74
A
PRO
75
n
75
PRO
75
A
LEU
76
n
76
LEU
76
A
THR
77
n
77
THR
77
A
PHE
78
n
78
PHE
78
A
ASN
79
n
79
ASN
79
A
SER
80
n
80
SER
80
A
VAL
81
n
81
VAL
81
A
VAL
82
n
82
VAL
82
A
GLU
83
n
83
GLU
83
A
LEU
84
n
84
LEU
84
A
ILE
85
n
85
ILE
85
A
ASN
86
n
86
ASN
86
A
HIS
87
n
87
HIS
87
A
TYR
88
n
88
TYR
88
A
ARG
89
n
89
ARG
89
A
ASN
90
n
90
ASN
90
A
GLU
91
n
91
GLU
91
A
SER
92
n
92
SER
92
A
LEU
93
n
93
LEU
93
A
ALA
94
n
94
ALA
94
A
GLN
95
n
95
GLN
95
A
TYR
96
n
96
TYR
96
A
ASN
97
n
97
ASN
97
A
PRO
98
n
98
PRO
98
A
LYS
99
n
99
LYS
99
A
LEU
100
n
100
LEU
100
A
ASP
101
n
101
ASP
101
A
VAL
102
n
102
VAL
102
A
LYS
103
n
103
LYS
103
A
LEU
104
n
104
LEU
104
A
LEU
105
n
105
LEU
105
A
TYR
106
n
106
TYR
106
A
PRO
107
n
107
PRO
107
A
VAL
108
n
108
VAL
108
A
SER
109
n
109
SER
109
A
LYS
110
n
110
LYS
110
A
TYR
111
n
111
TYR
111
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
54
A
N
LYS
54
A
O
ASN
57
A
O
ASN
57
1
A
A
HG1
OD1
THR
ASP
42
47
1.34
1
A
A
OD2
HH
ASP
TYR
29
106
1.38
1
A
A
HG
OD1
SER
ASP
92
101
1.38
1
A
A
OD2
HH
ASP
TYR
47
48
1.42
1
A
A
OE2
HZ2
GLU
LYS
22
110
1.51
1
A
A
O
HG1
ASP
THR
39
49
1.52
1
A
A
OD2
HZ2
ASP
LYS
67
69
1.55
1
A
A
O
HG
GLU
SER
12
109
1.56
1
A
A
O
HG
ALA
SER
40
41
1.57
1
A
A
HG1
O
THR
TYR
34
106
1.59
1
A
A
TYR
THR
48
49
-145.89
1
A
A
ASP
VAL
101
102
146.40
1
A
TYR
48
0.193
SIDE CHAIN
1
A
ARG
66
0.163
SIDE CHAIN
1
A
TYR
70
0.069
SIDE CHAIN
1
A
TYR
96
0.079
SIDE CHAIN
1
3.36
0.50
120.30
123.66
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
20
20
20
N
1
3.51
0.50
120.30
123.81
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
28
28
28
N
1
3.17
0.50
120.30
123.47
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
8.33
1.30
111.50
119.83
A
A
A
ND1
CE1
NE2
HIS
HIS
HIS
45
45
45
N
1
3.77
0.50
120.30
124.07
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
53
53
53
N
1
8.98
1.30
111.50
120.48
A
A
A
ND1
CE1
NE2
HIS
HIS
HIS
65
65
65
N
1
8.55
1.30
111.50
120.05
A
A
A
ND1
CE1
NE2
HIS
HIS
HIS
87
87
87
N
1
4.03
0.50
120.30
124.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
89
89
89
N
1
-3.61
0.60
121.00
117.39
A
A
A
CB
CG
CD2
TYR
TYR
TYR
106
106
106
N
1
A
A
CG
CD2
HIS
HIS
65
65
0.055
0.009
1.354
1.409
N
1
A
A
C
OXT
TYR
TYR
111
111
0.138
0.019
1.229
1.367
N
1
A
GLN
9
-144.17
-28.46
1
A
ASP
10
-162.19
70.04
1
A
GLU
12
-70.08
36.56
1
A
TRP
13
-166.12
-58.23
1
A
TRP
15
-123.26
-56.56
1
A
ILE
18
-131.33
-159.85
1
A
SER
19
-120.52
-157.37
1
A
ARG
28
-104.07
-79.64
1
A
LEU
36
-152.16
-51.89
1
A
VAL
37
99.21
95.00
1
A
ASP
39
-91.95
-141.63
1
A
SER
41
-156.97
55.07
1
A
LYS
43
-157.24
-60.58
1
A
MET
44
-91.03
-84.33
1
A
ASP
47
-97.44
-68.56
1
A
SER
60
-60.50
96.80
1
A
ILE
61
-106.32
75.43
1
A
ARG
66
59.55
-91.11
1
A
LYS
69
-92.44
-152.90
1
A
PHE
72
-95.28
-65.26
1
A
SER
80
-161.36
114.45
1
A
LEU
84
-75.52
42.67
1
A
ILE
85
-167.39
-48.48
1
A
ASN
90
-90.30
30.45
1
A
GLU
91
-157.21
-77.57
1
A
SER
92
-175.38
142.53
1
A
TYR
96
-66.84
-70.46
1
A
LEU
100
-155.74
-32.96
1
A
ASP
101
-4.49
75.66
1
A
VAL
102
-86.45
-152.38
1
A
LYS
103
-171.25
54.83
1
A
LEU
104
39.52
36.84
1
A
TYR
106
-151.00
60.63
1
A
SER
109
-170.22
77.96
1
A
LYS
110
71.52
-63.37
NMR STRUCTURE OF THE N-SH2 DOMAIN OF THE P85 SUBUNIT OF PI3-KINASE
1
N
N
A
ARG
20
A
ARG
20
HELX_P
A
LEU
27
A
LEU
27
1
1
8
A
VAL
82
A
VAL
82
HELX_P
A
ASN
90
A
ASN
90
1
2
9
PROTEIN BINDING
central beta-sheet with two flanking alpha-helices, PROTEIN BINDING
P85A_RAT
UNP
1
321
Q63787
GMNNNMSLQDAEWYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFNS
VVELINHYRNESLAQYNPKLDVKLLYPVSKY
321
431
1FU6
1
111
Q63787
A
1
1
111
1
LEU
conflict
SER
60
1FU6
A
Q63787
UNP
380
60
2
anti-parallel
A
THR
51
A
THR
51
A
LYS
54
A
LYS
54
A
ASN
57
A
ASN
57
A
SER
60
A
SER
60
1
P 1